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source: palm/trunk/SCRIPTS/mrun @ 217

Last change on this file since 217 was 215, checked in by raasch, 16 years ago
precompilation mechanism completely revised: now one depository per configuration block, further change of output messages
Property svn:keywords set to `Id Rev`
File size: 155.1 KB

Rev	Line
[71]	1	#!/bin/ksh
[66]	2	# mrun - Plot-Shellskript
[169]	3	# $Id: mrun 215 2008-11-18 09:54:31Z letzel $
[1]	4
	5	# Prozedur zum Starten von Modellaeufen
	6
	7	# letzte Aenderung:
	8	# 03/03/94 - Siggi - Entwicklungsbeginn
	9	# 21/03/94 - Siggi - Entwicklungsabschluss (Version 1.0)
	10	# 09/12/94 - Siggi - allexport unterbunden; statt dessen werden jetzt ein-
	11	# zelne Variable exportiert. Dies ist noetig, weil an-
	12	# sonsten irgendein Speicher ueberlaeuft und von mrun
	13	# aufgerufene Programme (z.B. stageout) mit Fehlern
	14	# abbrechen (too many arguments)
	15	# 20/06/95 - Siggi - noclobber muss explizit abgeschaltet, da jetzt
	16	# defaultmaessig im RRZN-Profile eingeschaltet
	17	# 10/06/97 - Siggi - Zusaetzliche Option -C bei cpp, damit // nicht
	18	# wegfallen
	19	# 25/04/00 - Siggi - Version 1.5
	20	# remote_addres und remote_user in return_addres bzw.
	21	# return_username umbenannt, return_username wird dem
	22	# mrun-Aufruf im Job ueber Option -U mitgegeben.
	23	# Neue Variable remote_username, die beim interaktiven
	24	# mrun-Aufruf zwingend ueber die neue Option -u oder
	25	# in der Konfigurationsdatei angegeben werden muss.
	26	# 08/02/01 - Siggi - Alle mrun-Meldungen ins englische uebersetzt,
	27	# Version 1.7
	28	# 05/05/02 - Siggi - Uebersetzungen mittels make-Mechanismus moeglich
	29	# 21/11/02 - Siggi - ENV-Variable XLFRTEOPTS wird vor Ausfuehrung auf
	30	# IBM gesetzt, um Record-Laenge der NAMELIST-Dateien,
	31	# zu bestimmen; Praeprozessoroptionen haben nun alle
	32	# die Form -Dtext=text, weil auf IBM sonst text durch
	33	# die leere Zeichenkette ersetzt wird
	34	# 01/08/03 - Siggi - Test of implementing dvrp+1PE on ibm
	35	# 07/01/04 - Siggi - additional preprocessor directive for ibm included
	36	# (-D$OMP=OMP) in order to avoid problems with
	37	# OMP_NUM_THREADS
	38	# 04/01/05 - Siggi - archiving on hanni and berni is done in separate
	39	# tar files, one for each node used
	40	# 07/01/04 - Siggi - old code for t3e, vpp and hpcs eliminated
	41	# 09/01/05 - Siggi - workaround for getting the IP address on gfdl3
	42	# 17/01/05 - Siggi - job for data transfer to local machine now within
	43	# job class c1 (HLRN)
	44	# 27/01/05 - Siggi - IP address workaround for gfdl3 removed
	45	# 28/01/05 - Siggi - tar-filenames on $PERM (HLRN) now include the
	46	# base filename and cycle number
	47	# 16/02/05 - Gerald - hababai validated
	48	# 14/03/05 - Siggi - abort on NEC after first runtime error (F_ERRCNT)
	49	# 29/03/05 - Marcus - berni*-en0 validated
	50	# 21/04/05 - Siggi - transfer-job-protocol for avs-data is no more stored
	51	# 24/04/05 - Siggi - netcdf support on lcmuk
	52	# 25/04/05 - Siggi - netcdf support on gfld3 (decalpha)
	53	# 11/05/05 - Siggi - files with non-numeric extensions (.xxx after cycle
	54	# number) can now be used within interactive runs
	55	# 12/05/05 - Siggi - netcdf support on ibm
	56	# 13/05/05 - Siggi - error in tar-filenames on $PERM (HLRN) removed
	57	# 18/05/05 - Siggi - netcdf support on nec
	58	# 24/05/05 - Siggi - netcdf support on ibms
	59	# 14/06/05 - Siggi - sleep interval after submit of restart job increased
	60	# to 30 seconds
	61	# 28/06/05 - Siggi - bora adjusted to new intel compiler (LD_LIBRARY_
	62	# PATH is temporarily set)
	63	# 07/09/05 - Siggi - setting of MP_EAGER_LIMIT switched off because it
	64	# caused warnings in the job protocol
	65	# 20/10/05 - Siggi - update of netcdf-version on decalpha (gfdl3)
	66	# 25/10/05 - Siggi - error in listing files for getting the cycle number
	67	# removed
	68	# 26/10/05 - Siggi - new paths for dvrp-library, transfer of catalogs
	69	# realized by file attribute trpe
	70	# 28/10/05 - Siggi - if existing, the file extension is output in case
	71	# of missing input file - no job abort in case of
	72	# missing input files with file extensions
	73	# (preliminary solution)
	74	# 31/10/05 - Siggi - data transfer from nech now within seperate job
	75	# 04/11/05 - Siggi - netcdf 3.6.0-p1 on ibmh/ibmb
	76	# 07/12/05 - Siggi - gallego and elephanta admitted
	77	# 30/12/05 - Siggi - gfdl5 (ibmy) admitted
	78	# 10/01/06 - Siggi - cpp directive for NetCDF 64bit support
	79	# 20/01/06 - Siggi - cpp directive for ibmy
	80	# 09/02/06 - Siggi - ibmy admitted for batch mode
	81	# 13/04/06 - Siggi - ostria admitted
	82	# 18/04/06 - Siggi - usage of OpenMP implemented (additional option -O)
	83	# 10/05/06 - Siggi - environment variable XLSMPOPTS set on IBM for
	84	# optimization of OpenMP runs (option stacksize is
	85	# necessary for large gridpoint numbers because
	86	# otherwise a segmentation fault occurs)
	87	# 23/05/05 - Siggi - lctit (SUN Fire X4600) admitted
	88	# 21/08/06 - Siggi - standard mrun path on scirocco is as on bora
	89	# 23/08/06 - Siggi - netcdf support for scirocco (notebook)
	90	# 20/09/06 - Marcus - add DVRP library on nech
	91	# 24/10/06 - Siggi - Environment variables for PALM steering are written
	92	# on local NAMELIST file ENVPAR
	93	# 24/11/06 - Siggi - levanto admitted, maestro switched to ifc 9.1
	94	# 28/11/06 - Siggi - call to interpret_config.x_levanto because of SuSe 10
	95	# 06/02/07 - Siggi - add DVRP library on lcmuk
	96	# 07/02/07 - Siggi - revision of source code handling, source code is
	97	# now expected in directory given by source_path and
	98	# not in the current working directory, source code
	99	# files provided in add_source_path are allways
	100	# compiled, source code to be compiled is allways
	101	# sampled in SOURCES_FOR_RUN_$fname which is a
	102	# subdirectory of the current working directory,
[5]	103	# -s TEST changed to -s WRITE_PERMIT or -s WP,
[1]	104	# adapted for RIAM (neck)
[5]	105	# bugfix for cycle number of output file (extout)
	106	# all hpmuk-related code removed
[14]	107	# 14/02/07 - Siggi - dvrp support for neck added
[21]	108	# 28/02/07 - Siggi - empty lines in configuration file are accepted
[26]	109	# mrun_path replaced by PALM_BIN,
	110	# all machines are calling interpret_config.x
[66]	111	# 14/03/07 - Siggi - fimm admitted, revision number added to terminal
	112	# output
[69]	113	# 16/03/07 - Siggi - adjustments for lctit
[78]	114	# 29/03/07 - Siggi - global revision transfered to batch job by new
	115	# option -G
[82]	116	# 30/03/07 - Siggi - compilation "by hand" removed, cpp-directives/options
	117	# + netcdf/dvrp-options are read from configuration
	118	# file, host identifier (local_host) is read from
	119	# config file, code related to ftp filetransfer
	120	# removed (incl. option -f)
[97]	121	# 19/06/07 - Siggi - time limit for cdata jobs increased
[102]	122	# 25/07/07 - Siggi - two sets of executables can be started on lcmuk,
	123	# if new option -Y (coupling) is given,
	124	# output of executables to aout_output removed,
	125	# messages are immediately written to stdout instead
[108]	126	# 03/08/07 - Marcus - add XOPT="-X $numprocs" for lcfimm
	127	# 09/08/07 - Marcus - workaround on lcfimm to propagate environment
	128	# variables out to the nodes in coupled mode -disabled-
	129	# 13/08/07 - Marcus - start local restart jobs per ssh on lcfimm
[109]	130	# 28/08/07 - Marcus - completely remove workaround on lcfimm to propagate
	131	# environment variables out to the nodes in coupled mode
[118]	132	# 15/10/07 - Siggi - Preliminary adjustments for lctit, based on Jin's
	133	# suggestions
[122]	134	# 19/10/07 - Marcus - further adjustments for lctit: add new optional
	135	# argument -g group_number, admit all sla* node_usage
	136	# queues
[129]	137	# 30/10/07 - Marcus - further adjustments for queues on lctit
[149]	138	# 14/02/08 - Bjoern - link of restart files with long file name possible
	139	# 28/02/08 - Marcus - If environment variable link_local_output is set to
	140	# true, mrun tries "ln -f" on local output and resorts
	141	# to "cp" or "cp -r" on error
[164]	142	# 15/04/08 - Siggi - argument -c introduced to most of the subjob calls,
	143	# which allows the user to choose his own job catalog
	144	# by setting job_catalog in the configuration file
	145	# (default is ~/job_queue),
[172]	146	# workaround for mpiexec with -env option,
[164]	147	# adjustments for lcxt4 (Bergen Center for Computational
	148	# Science)
[183]	149	# 22/05/08 - Marcus - If environment variable link_local_input is set to
	150	# true, mrun tries "ln -f" on local input and resorts
	151	# to "cp" or "cp -r" on error
[180]	152	# 27/05/08 - Siggi - PATH is set to PALM_BIN everywhere (missing so far)
[179]	153	# 14/07/08 - Siggi - adjustments for lcsgih
[188]	154	# 08/08/08 - Marcus - typo removed in lcxt4 branch
[204]	155	# 17/09/08 - Siggi - restart mechanism adjusted for lcsgi
[210]	156	# 02/10/08 - BjornM - argument "-Y" modified, adjustments for coupled runs
	157	# 21/10/08 - Siggi - bugfix for the case that -K has more than one
	158	# argument
[211]	159	# 08/11/08 - Siggi - bugfix for depository path settings in configuration
	160	# file
	161	# 11/11/08 - Siggi - rules for using user code files changed: user
	162	# code splitted into one file per subroutine,
	163	# user can provide his/her own makefile, only
	164	# default source-code filenames are allowed
[215]	165	# 14/11/08 - Siggi - cond1 and cond2 are part of the depository name
[211]	166
	167
[1]	168
	169	# VARIABLENVEREINBARUNGEN + DEFAULTWERTE
	170
	171	set +o allexport # SICHERHEITSHALBER UNTERBINDEN, DA SONST EVTL. STAGEOUT
	172	# NICHT LAUEFT (TOO MANY ARGUMENTS - PROBLEM)
	173	set +o noclobber # EXISTIERENDE DATEIEN DUERFEN UEBERSCHRIEBEN WERDEN
	174
	175	AddFilenames=""
	176	additional_conditions=""
	177	add_source_path=""
	178	afname=""
	179	archive_save=true
	180	archive_system=none
	181	compiler_name=""
	182	cond1=""
	183	cond2=""
	184	config_file=.mrun.config
[206]	185	coupled_dist=""
	186	coupled_mode="mpi1"
[1]	187	cpp_opts=""
[82]	188	cpp_options=""
[1]	189	cpumax=0
	190	cpurest=0
	191	delete_temporary_catalog=true
	192	do_batch=false
	193	do_compile=true
	194	do_remote=false
	195	do_stagein=true
	196	do_stageout=true
	197	do_trace=false
	198	email_notification=""
	199	exclude=""
	200	executable=""
	201	execution_error=false
[67]	202	fimm=false
[1]	203	fname=test
	204	fromhost=""
[78]	205	global_revision=""
[122]	206	group_number=none
[1]	207	host=""
	208	host_file=""
	209	hp=""
	210	ignore_archive_error=false
	211	input_list=""
	212	interpreted_config_file=""
[164]	213	job_catalog="~/job_queue"
[1]	214	job_on_file=""
	215	keep_data_from_previous_run=false
[183]	216	link_local_input=false
[149]	217	link_local_output=false
[1]	218	localhost_realname=$(hostname)
	219	local_compile=false
	220	locat=normal
	221	mainprog=""
	222	makefile=""
	223	mc=$0
	224	while [[ $(echo $mc \| grep -c "/") != 0 ]]
	225	do
	226	mc=`echo $mc \| cut -f2- -d"/"`
	227	done
	228	module_files=""
	229	mrun_script_name=$mc
[82]	230	netcdf_inc=""
	231	netcdf_lib=""
[1]	232	netcdf_support=false
	233	node_usage=default
	234	numprocs=""
[206]	235	numprocs_atmos=0
	236	numprocs_ocean=0
[1]	237	OOPT=""
	238	openmp=false
	239	output_list=""
	240	package_list=""
	241	punkte="..........................................................."
	242	queue=none
	243	read_from_config=""
[5]	244	restart_run=false
[146]	245	return_addres=$(nslookup `hostname` 2>&1 \| grep "Address:" \| tail -1 \| awk '{print $2}')
[1]	246	if [[ $return_addres = 130.75.105.158 ]]
	247	then
	248	return_addres=172.20.25.41
	249	echo "+++ WARNING: return_addres changed to $return_addres !!!!!"
	250	fi
	251	# if [[ $return_addres = 210.117.65.1 ]]
	252	# if [[ $(nslookup `hostname` 2>&1 \| grep -c 210.117.65.1) = 1 ]]
	253	# then
	254	# [[ $localhost_realname = gfdl3.yonsei.ac.kr ]] && return_addres=165.132.26.56
	255	# fi
	256	return_password=""
	257	return_username=$LOGNAME
	258	remotecall=false
	259	remote_username=""
[102]	260	run_coupled_model=false
[1]	261	run_mode=""
	262	scirocco=false
	263	store_on_archive_system=true
	264	striche=" ----------------------------------------------------------------------------"
	265	silent=false
	266	source_list=""
	267	source_path=SOURCE
	268	tasks_per_node=""
	269	threads_per_task=1
	270	tmpcreate=false
	271	tmp_data_catalog=""
	272	transfer_problems=false
	273	usern=$LOGNAME
	274	working_directory=`pwd`
	275	TOPT=""
	276	XOPT=""
	277	zeit=$( date \| cut -c 12-19 )
	278
	279	typeset -i iec=0 iic=0 iin=0 ioc=0 iout=0 memory=0 stagein_anz=0 stageout_anz=0
[206]	280	typeset -i cputime i ii iia iii iio icycle inode ival jobges jobsek maxcycle minuten nodes pes sekunden tp1
[1]	281
[66]	282	typeset -R30 calltime
[1]	283	typeset -L20 spalte1
	284	typeset -L40 spalte2
	285	typeset -L60 spalte3
	286	typeset -L35 string1=`date`
	287	typeset -L12 string2=$usern
	288	typeset -L12 string3=$localhost_realname
	289	typeset -L12 string4
	290	typeset -L12 string5
[201]	291	typeset -L30 version="MRUN 2.0 Rev$Rev: 215 $"
[1]	292
	293
	294
	295	# EINZELNE VARIABLE FUER HAUPTPROGRAMM EXPORTIEREN
	296	export cpurest fname host localhost return_addres return_username remotecall tasks_per_node
	297
	298	# FOLGENDE VARIABLEN MUESSEN FUER DIE INTERPRETATION DER KONFIGURATIONSDATEI
	299	# EXPORTIERT WERDEN
	300	export afname config_file cpp_opts cpumax do_batch do_trace fname fromhost
[127]	301	export group_number input_list memory numprocs output_list queue run_mode
[1]	302
	303
	304
	305	# FEHLERBEHANDLUNG
	306	# BEI EXIT:
[83]	307	trap 'rm -rf $working_directory/tmp_mrun
[69]	308	if [[ $locat != localhost ]]
[1]	309	then
[22]	310	# if [[ ! -f ${mrun_path}/statistik/mrun_statistik ]]
	311	# then
	312	# cat > ${mrun_path}/statistik/mrun_statistik << %STATEND%
	313	#MRUN-calls on $localhost
	314	#
	315	#date and time user localhost remotehost termination mrun-command
	316	#--------------------------------------------------------------------------------------------------------------------
	317	#%STATEND%
	318	# chmod 666 ${mrun_path}/statistik/mrun_statistik
	319	# fi
	320	#
	321	# # EINTRAG IN DIE STATISTIK-DATEI
	322	# string4=$host
	323	# string5=$locat
	324	# if [[ "$job_on_file" = "" && $locat != control_c && $locat != user_abort ]]
	325	# then
	326	# if [[ $do_batch = true ]]
	327	# then
	328	# printf "$string1$string2$string3$string4$string5$mrun_com \n" >> ${mrun_path}/statistik/mrun_statistik
	329	# else
	330	# printf "$string1$string2$string3$string4$string5$mc \n" >> ${mrun_path}/statistik/mrun_statistik
	331	# fi
	332	# fi
[69]	333	echo " " > /dev/null
[1]	334	fi
	335
	336	if [[ $locat != normal && $locat != control_c && $locat != local_compile ]]
	337	then
	338
	339	# EVENTUELLE ERROR-KOMMANDOS ABARBEITEN
	340	(( i = 0 ))
	341	while (( i < iec ))
	342	do
	343	(( i = i + 1 ))
	344	printf "\n *** Execution of ERROR-command:\n"
	345	printf " >>> ${err_command[$i]}\n"
	346	eval ${err_command[$i]}
	347	done
	348	if [[ -n $interpreted_config_file ]] then
	349	rm -rf $interpreted_config_file
	350	fi
[71]	351	if [[ -n .mrun_environment ]] then
	352	rm -rf .mrun_environment
	353	fi
[1]	354	if [[ $tmpcreate = true ]]
	355	then
	356	printf "\n *** Contents of \"$TEMPDIR\":\n"
	357	ls -al; cd
	358	[[ $delete_temporary_catalog = true ]] && rm -rf $TEMPDIR
	359	fi
	360	if [[ -f ~/job_queue/JOBINFO.$QSUB_REQID ]]
	361	then
	362	rm -rf ~/job_queue/JOBINFO.$QSUB_REQID
	363	fi
	364	printf "\n\n+++ MRUN killed \n\n"
	365	elif [[ $locat != control_c ]]
	366	then
	367	printf "\n\n --> all actions finished\n\n"
	368	printf " Bye, bye $usern !!\n\n"
	369	fi' exit
	370
	371
	372	# BEI TERMINAL-BREAK:
[83]	373	trap 'rm -rf $working_directory/tmp_mrun
[69]	374	[[ $tmpcreate = true ]] && (cd; rm -rf $TEMPDIR)
[1]	375	if [[ -f ~/job_queue/JOBINFO.$QSUB_REQID ]]
	376	then
	377	rm -rf ~/job_queue/JOBINFO.$QSUB_REQID
	378	fi
	379	printf "\n+++ MRUN killed by \"^C\" \n\n"
	380	locat=control_c
	381	exit
	382	' 2
	383
	384
[22]	385	# CHECK IF THE PATH FOR THE PALM BINARIES (SCRIPTS+UTILITY-PROGRAMS) HAS
	386	# BEEN SET
	387	if [[ "$PALM_BIN" = "" ]]
	388	then
	389	printf "\n +++ environment variable PALM_BIN has not been set"
	390	printf "\n please set it to the directory where the PALM scripts are located"
	391	locat=palm_bin; exit
	392	fi
[180]	393	export PATH=$PALM_BIN:$PATH
[22]	394
	395
[1]	396
	397	# SHELLSCRIPT-OPTIONEN EINLESEN UND KOMMANDO NEU ZUSAMMENSETZEN, FALLS ES
	398	# FUER FOLGEJOBS BENOETIGT WIRD
[206]	399	while getopts :a:AbBc:Cd:D:Fg:G:h:H:i:IkK:m:M:n:o:Op:P:q:r:R:s:St:T:u:U:vxX:Y: option
[1]	400	do
	401	case $option in
	402	(a) afname=$OPTARG;;
	403	(A) store_on_archive_system=false; mc="$mc -A";;
	404	(b) do_batch=true; mc="$mc -b";;
	405	(B) delete_temporary_catalog=false; mc="$mc -B";;
	406	(c) config_file=$OPTARG; mc="$mc -c$OPTARG";;
[5]	407	(C) restart_run=true; mc="$mc -C";;
[1]	408	(d) fname=$OPTARG; mc="$mc -d$OPTARG";;
[210]	409	(D) cpp_opts="$cpp_opts $OPTARG"; mc="$mc -D'$OPTARG'";;
[79]	410	(F) job_on_file="-D"; mc="$mc -F";;
[122]	411	(g) group_number=$OPTARG; mc="$mc -g$OPTARG";;
[78]	412	(G) global_revision=$OPTARG; mc="$mc -G'$OPTARG'";;
[1]	413	(h) host=$OPTARG; mc="$mc -h$OPTARG";;
	414	(H) fromhost=$OPTARG; mc="$mc -H$OPTARG";;
	415	(i) input_list=$OPTARG; mc="$mc -i'$OPTARG'";;
	416	(I) ignore_archive_error=true; mc="$mc -I";;
	417	(k) keep_data_from_previous_run=true; mc="$mc -k";;
[210]	418	(K) additional_conditions="$OPTARG"; mc="$mc -K'$OPTARG'";;
[1]	419	(m) memory=$OPTARG; mc="$mc -m$OPTARG";;
	420	(M) makefile=$OPTARG; mc="$mc -M$OPTARG";;
	421	(n) node_usage=$OPTARG; mc="$mc -n$OPTARG";;
	422	(o) output_list=$OPTARG; mc="$mc -o'$OPTARG'";;
	423	(O) use_openmp=true; mc="$mc -O";;
	424	(p) package_list=$OPTARG; mc="$mc -p'$OPTARG'";;
	425	(P) return_password=$OPTARG; mc="$mc -P$OPTARG";;
	426	(q) queue=$OPTARG; mc="$mc -q$OPTARG";;
	427	(r) run_mode=$OPTARG; mc="$mc -r'$OPTARG'";;
	428	(R) remotecall=true;return_addres=$OPTARG; mc="$mc -R$OPTARG";;
	429	(s) source_list=$OPTARG; mc="$mc -s'$OPTARG'";;
	430	(S) read_from_config=false; mc="$mc -S";;
	431	(t) cpumax=$OPTARG; mc="$mc -t$OPTARG";;
	432	(T) tasks_per_node=$OPTARG; mc="$mc -T$OPTARG";;
	433	(u) remote_username=$OPTARG; mc="$mc -u$OPTARG";;
	434	(U) return_username=$OPTARG; mc="$mc -U$OPTARG";;
	435	(v) silent=true; mc="$mc -v";;
	436	(x) do_trace=true;set -x; mc="$mc -x";;
	437	(X) numprocs=$OPTARG; mc="$mc -X$OPTARG";;
[206]	438	(Y) run_coupled_model=true; coupled_dist=$OPTARG; mc="$mc -Y'$OPTARG'";;
[1]	439	(\?) printf "\n +++ unknown option $OPTARG \n"
	440	printf "\n --> type \"$0 ?\" for available options \n"
	441	locat=parameter;exit;;
	442	esac
	443	done
	444
	445
	446	# EVTL. POSITIONSPARAMETER EINLESEN
	447	# ZUR ZEIT GIBT ES NUR DEN PARAMETER ? (=KURZINFO)
	448	shift OPTIND-1
	449
	450
	451	# KURZE AUFRUFBESCHREIBUNG WIRD HIER AUSGEGEBEN
	452	if [[ "$1" = "?" ]]
	453	then
	454	(printf "\n *** mrun can be called as follows:\n"
[206]	455	printf "\n $mrun_script_name -b -c.. -d.. -D.. -f.. -F -h.. -i.. -I -K.. -m.. -o.. -p.. -r.. -R -s.. -t.. -T.. -v -x -X.. -Y.. <modus>\n"
[1]	456	printf "\n Description of available options:\n"
	457	printf "\n Option Description Default-Value"
	458	printf "\n -a base name of input files equiv. -d"
	459	printf "\n -A no archiving when using file-attribute fl"
	460	printf "\n -b batch-job on local machine ---"
	461	printf "\n -B do not delete temporary directory at end ---"
	462	printf "\n -c configuration file .mrun.config"
	463	printf "\n -d base name of files attached to program test"
	464	printf "\n -D preprocessor(cpp)-directives \"\" "
	465	printf "\n -F create remote job file only ---"
	466	printf "\n -h execution host $localhost_realname"
	467	printf "\n -i INPUT control list \"\" "
	468	printf "\n -I archiving errors of previous batch-jobs"
	469	printf "\n will be ignored"
	470	printf "\n -k keep data from previous run"
	471	printf "\n -K additional conditions for controling"
	472	printf "\n usage of conditional code and"
	473	printf "\n env-variables in configuration file \"\" "
	474	printf "\n -m memory demand in MB (batch-jobs) 0 MB"
	475	printf "\n -M Makefile name Makefile"
	476	printf "\n -n node usage (shared/not_shared) depending on -h"
	477	printf "\n -o OUTPUT control list \"\" "
	478	printf "\n -O use OpenMP ---"
	479	printf "\n -p software package list \"\" "
	480	printf "\n -q queue \"$queue\" "
	481	printf "\n -r run control list (combines -i -o) \"\" "
	482	printf "\n -s filenames of routines to be compiled \"\" "
	483	printf "\n must end with .f, .f90, .F, or .c !"
	484	printf "\n use \"..\" for more than one file and wildcards"
	485	printf "\n -s TEST compiles all files with w-permit"
	486	printf "\n -S config file interpreted by shellscript ---"
	487	printf "\n -t allowed cpu-time in seconds (batch) 0"
	488	printf "\n -T tasks per node depending on -h"
	489	printf "\n -u username on remote machine \"\" "
	490	printf "\n -v no prompt for confirmation ---"
	491	printf "\n -x tracing of mrun for debug purposes ---"
	492	printf "\n -X # of processors (on parallel machines) 1"
[206]	493	printf "\n -Y run coupled model, \"#1 #2\" with"
	494	printf "\n #1 atmosphere and #2 ocean processors \"#/2 #/2\" depending on -X"
[1]	495	printf "\n "
	496	printf "\n Possible values of positional parameter <modus>:"
	497	printf "\n \"?\" - this outline \n\n") \| more
	498	exit
	499	elif [[ "$1" != "" ]]
	500	then
	501	printf "\n +++ positional parameter $1 unknown \n"
	502	locat=parameter; exit
	503	fi
	504
	505
	506
	507	# KURZE STARTMELDUNG
	508	printf "\n*** $version "
	509	printf "\n will be executed. Please wait ..."
	510
	511
[82]	512
	513	# PRUEFEN, OB KONFIGURATIONS-DATEI VORHANDEN
	514	if [[ ! -f $config_file ]]
	515	then
	516	printf "\n\n +++ configuration file: "
	517	printf "\n $config_file"
	518	printf "\n does not exist"
	519	locat=connect; exit
	520	fi
	521
	522
	523	# HOST-IDENTIFIER (local_host) AUS KONFIGURATIONSDATEI BESTIMMEN
	524	line=""
	525	grep "%host_identifier" $config_file > tmp_mrun
	526	while read line
	527	do
[206]	528	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
[82]	529	then
	530	HOSTNAME=`echo $line \| cut -d" " -s -f2`
	531	host_identifier=`echo $line \| cut -d" " -s -f3`
[83]	532	if [[ $localhost_realname = $HOSTNAME ]]
[82]	533	then
	534	localhost=$host_identifier
	535	break
	536	fi
	537	fi
	538	done < tmp_mrun
	539
	540	if [[ "$localhost" = "" ]]
	541	then
	542	printf "\n\n +++ no host identifier found in configuration file \"$config_file\""
	543	printf "\n for local host \"$localhost_realname\"."
	544	printf "\n Please add line"
	545	printf "\n \"\%host_identifier $localhost_realname <identifier>\""
	546	printf "\n to the configuration file."
	547	locat=localhost; exit
	548	fi
	549
	550
	551	# HOSTSPEZIFISCHE VARIABLEN SETZEN
	552	case $localhost_realname in
	553	(breg-en0\|berni-en0) archive_system=tivoli;;
	554	(cs*) archive_system=ut;;
	555	(fimm.bccs.uib.no) fimm=true;;
	556	(gate\|n-sx) PATH=$PALM_BIN:$PATH:/usr/bin/nqsII;;
	557	(hreg-en0\|hanni-en0) archive_system=tivoli;;
	558	(scirocco) scirocco=true;;
	559	esac
	560
	561
	562
[1]	563	# BASISNAME DER INPUT-DATEIEN GLEICH ALLGEMEINEM BASISNAMEN SETZEN,
	564	# WENN NICHT VOM BENUTZER ANDERS BESTIMMT
	565	[[ "$afname" = "" ]] && afname=$fname
	566
	567
	568	# EVTL. RUN-MODUS DEN I/O-LISTEN HINZUFUEGEN
	569	if [[ "$run_mode" != "" ]]
	570	then
	571	input_list="$input_list $run_mode"
	572	output_list="$output_list $run_mode"
	573	fi
	574
	575
	576	# RECHNERNAMEN ABSPEICHERN, VON DEM AUS JOB GESTARTET WIRD,
	577	# ALLERDINGS NUR DANN, WENN NICHT PER OPTION -H BEREITS EIN WERT
	578	# ZUGEWIESEN WURDE (MRUN MACHT DIES IMMER, WENN ES SELBST BATCH-JOBS
	579	# STARTET)
	580	if [[ "$fromhost" = "" ]]
	581	then
	582	fromhost=$localhost
	583	fi
	584
	585
	586	# PRUEFEN, OB MRUN NUR TESTWEISE AUF DER LOKALEN MASCHINE KOMPILIEREN SOLL
	587	if [[ "$source_list" = LOCAL_COMPILE_TEST ]]
	588	then
	589	source_list=TEST
	590	local_compile=true
	591	host=$localhost
	592	fi
	593
	594
	595	# PRUEFEN, OB AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL
	596	# WERT VON do_remote WIRD FUER DATEIVERBINDUNGEN BENOETIGT.
	597	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
	598	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
	599	if [[ -n $host && "$host" != $localhost ]]
	600	then
	601	do_batch=true
	602	do_remote=true
	603	case $host in
[206]	604	(ibm\|ibmb\|ibmh\|ibms\|ibmy\|nech\|neck\|lcsgib\|lcsgih\|lctit\|unics\|lcxt4) true;;
[1]	605	(*) printf "\n"
[83]	606	printf "\n +++ sorry: execution of batch jobs on remote host \"$host\""
	607	printf "\n is not available"
[1]	608	locat=nqs; (( iec = 0 )); exit;;
	609	esac
	610	else
	611	host=$localhost
	612	fi
	613
	614
	615	# ZUSATZBEDINGUNGEN (OPTION -K) AUSWERTEN
	616	if [[ -n $additional_conditions ]]
	617	then
[69]	618	# echo $additional_conditions \| cut -d" " -f1-3 \| read cond1 cond2 dummy
	619	cond1=`echo $additional_conditions \| cut -d" " -f1`
	620	cond2=`echo $additional_conditions \| cut -d" " -s -f2`
	621	dummy=`echo $additional_conditions \| cut -d" " -s -f3`
[1]	622	if [[ -n $dummy ]]
	623	then
	624	printf "\n +++ more than 2 additional conditions given for Option \"-K\""
	625	locat=options; exit
	626	fi
	627	fi
	628
	629
[206]	630	# KOPPLUNGSEIGENSCHAFTEN (-Y) AUSWERTEN UND coupled_mode BESTIMMEN
	631	if [[ $run_coupled_model = true ]]
	632	then
	633
	634	if [[ -n $coupled_dist ]]
	635	then
	636
	637	numprocs_atmos=`echo $coupled_dist \| cut -d" " -s -f1`
	638	numprocs_ocean=`echo $coupled_dist \| cut -d" " -s -f2`
	639
	640	if (( $numprocs_ocean + $numprocs_atmos != $numprocs ))
	641	then
	642
	643	printf "\n +++ number of processors does not fit to specification by \"-Y\"."
	644	printf "\n PEs (total) : $numprocs"
	645	printf "\n PEs (atmosphere): $numprocs_atmos"
	646	printf "\n PEs (ocean) : $numprocs_ocean"
	647	locat=coupling; exit
	648
	649	# REARRANGING BECAUSE CURRENTLY ONLY 1:1 TOPOLOGIES ARE SUPPORTED
	650	# THIS SHOULD BE REMOVED IN FUTURE
	651	elif (( $numprocs_ocean != $numprocs_atmos ))
	652	then
	653
	654	printf "\n +++ currently only 1:1 topologies are supported"
	655	printf "\n PEs (total) : $numprocs"
	656	printf "\n PEs (atmosphere): $numprocs_atmos"
	657	printf "\n PEs (ocean) : $numprocs_ocean"
	658	(( numprocs_atmos = $numprocs / 2 ))
	659	(( numprocs_ocean = $numprocs / 2 ))
	660	printf "\n +++ rearranged topology to $numprocs_atmos:$numprocs_ocean"
	661
	662	fi
	663
	664	else
	665
	666	(( numprocs_ocean = $numprocs / 2 ))
	667	(( numprocs_atmos = $numprocs / 2 ))
	668
	669	fi
	670	coupled_dist=`echo "$numprocs_atmos $numprocs_ocean"`
	671
	672	# GET coupled_mode FROM THE CONFIG FILE
	673	line=""
	674	grep "%cpp_options.-D__mpi2.$host" $config_file > tmp_mrun
	675	while read line
	676	do
	677	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" && ( $(echo $line \| cut -d" " -s -f4) = $cond1 \|\| $(echo $line \| cut -d" " -s -f4) = $cond2 ) ]]
	678	then
	679	coupled_mode="mpi2"
	680	fi
	681	done < tmp_mrun
	682
	683	fi
	684
	685
[1]	686	# PRUEFEN, OB EVTL. BEI VORHERGEHENDEM LAUF (KETTENJOB) EINE
	687	# ARCHIVIERUNG FEHLGESCHLAGEN IST
	688	if [[ -f ~/job_queue/ARCHIVE_ERROR_$fname ]]
	689	then
	690	if [[ $ignore_archive_error = false ]]
	691	then
	692	printf "\n +++ data archiving of previous run failed"
	693	printf "\n see directory \~/job_queue on remote machine"
	694	locat=archive; exit
	695	else
	696	printf "\n +++ warning: data archiving in a previous run failed"
	697	printf "\n MRUN continues, trying to get backup copy"
	698	fi
	699	fi
	700
	701
	702
	703	# LESEN UND INTERPRETIEREN DER KONFIGURATIONS-DATEI VOM SHELLSCRIPT AUS
	704	# VORUEBERGEHEND ZWINGEND AUF LINUX-RECHNERN
	705	if [[ "$read_from_config" = false ]]
	706	then
	707
	708	[[ $silent = false ]] && printf "\n Reading the configuration file... "
	709	while read zeile
	710	do
	711	[[ $silent = false ]] && printf "."
	712
	713
	714	# ZUERST EVENTUELL VORKOMMENDE ENVIRONMENT-VARIABLEN DURCH IHRE WERTE
	715	# ERSETZEN
	716	eval zeile=\"$zeile\"
	717
	718
	719	# INTERPRETATION DER ZEILE
[21]	720	if [[ "$(echo $zeile)" = "" ]]
[1]	721	then
[21]	722	# LEERZEILE, KEINE AKTION
	723	continue
[1]	724
[21]	725	elif [[ "$(echo $zeile \| cut -c1)" = "#" ]]
	726	then
	727
[1]	728	# ZEILE IST KOMMENTARZEILE
	729	true
	730
	731	elif [[ "$(echo $zeile \| cut -c1)" = "%" ]]
	732	then
	733
	734	# ZEILE DEFINIERT ENVIRONMENT-VARIABLE
	735	zeile=$(echo $zeile \| cut -c2-)
[69]	736	# echo $zeile \| cut -d" " -f1-5 \| read var value for_host for_cond1 for_cond2
	737	var=`echo $zeile \| cut -d" " -f1`
	738	value=`echo $zeile \| cut -d" " -s -f2`
	739	for_host=`echo $zeile \| cut -d" " -s -f3`
	740	for_cond1=`echo $zeile \| cut -d" " -s -f4`
	741	for_cond2=`echo $zeile \| cut -d" " -s -f5`
[1]	742
	743	if [[ "$for_host" = "" \|\| ( "$for_host" = $host && "$for_cond1" = "$cond1" && "$for_cond2" = "$cond2" ) \|\| $(echo "$input_list$output_list"\|grep -c "$for_host") != 0 ]]
	744	then
	745
	746	# BEI COMPILER- CPP- ODER LINKEROPTIONEN EVTL ":" DURCH " "
	747	# ERSETZEN. "::" WIRD DURCH ":" ERSETZT.
	748	value=`echo $value \| sed 's/::/%DUM%/g' \| sed 's/:/ /g' \| sed 's/%DUM%/:/g'`
	749
	750
	751	# ENVIRONMENT-VARIABLE WIRD WERT AUS KONFIGURATIONSDATEI
	752	# ZUGEWIESEN, WENN SIE SELBST NOCH KEINEN WERT UEBER DIE
	753	# ENTSPRECHENDE SCRIPT-OPTION ERHALTEN HAT. SOLCHE
	754	# VARIABLEN HAETTEN DANN DEN WERT "" ODER IM INTEGER-FALL DEN
	755	# WERT 0. ALLGEMEINE REGEL ALSO: SCRIPT-OPTION GEHT UEBER
	756	# KONFIGURATIONSDATEI
	757	if [[ "$(eval echo \$$var)" = "" \|\| "$(eval echo \$$var)" = "0" ]]
	758	then
	759	eval $var=\$value
	760
	761	# EVTL. BILDSCHIRMAUSGABEN DER ENVIRONMENT-VARIABLEN
	762	if [[ $do_trace = true ]]
	763	then
	764	printf "\n*** ENVIRONMENT-VARIABLE $var = $value"
	765	fi
	766	fi
	767
	768	# WENN ENVIRONMENT-VARIABLE HOST VEREINBART, DANN SOFORT AUSWERTEN
	769	# WERT VON do-remote WIRD BEI DATEIVERBINDUNGEN BENOETIGT
	770	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
	771	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
	772	if [[ $var = host ]]
	773	then
	774	if [[ -n $host && "$host" != $localhost ]]
	775	then
	776	do_batch=true
	777	do_remote=true
	778	case $host in
[206]	779	(ibm\|ibms\|ibmy\|lcsgib\|lcsgih\|lctit\|nech\|neck\|unics\|lcxt4) true;;
[83]	780	(*) printf "\n +++ sorry: execution of batch jobs on remote host \"$host\""
	781	printf "\n is not available"
[1]	782	locat=nqs; exit;;
	783	esac
	784	else
	785	host=$localhost
	786	fi
	787	fi
	788
	789	# VOM BENUTZER DEFINIERTE ENVIRONMENT VARIABLEN MUESSEN PRINZIPIELL
	790	# EXPORTIERT WERDEN, DA SIE VIELLEICHT IN WEITER UNTEN AUFZURUFEN-
	791	# DEN PROGRAMMEN BENOETIGT WERDEN
	792	export $var
	793	fi
	794
	795
	796
	797
	798	elif [[ "$(echo $zeile \| cut -c1-3)" = "EC:" ]]
	799	then
	800
	801	# ZEILE DEFINIERT ERROR-KOMMANDO
	802	(( iec = iec + 1 ))
	803	zeile=$(echo $zeile \| cut -c4-)
	804	err_command[$iec]="$zeile"
	805
	806	elif [[ "$(echo $zeile \| cut -c1-3)" = "IC:" ]]
	807	then
	808
	809	# ZEILE DEFINIERT INPUT-KOMMANDO
	810	(( iic = iic + 1 ))
	811	zeile=$(echo $zeile \| cut -c4-)
	812	in_command[$iic]="$zeile"
	813
	814	elif [[ "$(echo $zeile \| cut -c1-3)" = "OC:" ]]
	815	then
	816
	817	# ZEILE DEFINIERT OUTPUT-KOMMANDO
	818	(( ioc = ioc + 1 ))
	819	zeile=$(echo $zeile \| cut -c4-)
	820	out_command[$ioc]="$zeile"
	821
	822	else
	823
	824	# ZEILE DEFINIERT DATEIVERBINDUNG. EINLESEN DER DATEIEIGENSCHAFTEN
	825	# s2a: in/out - Feld
	826	# s2b: loc - Feld (optional)
	827	# s2c: tr/ar - Feld (optional)
[69]	828	# echo $zeile \| cut -d" " -f1-2 \| read s1 s2
	829	s1=`echo $zeile \| cut -d" " -f1`
	830	s2=`echo $zeile \| cut -d" " -s -f2`
[1]	831	s2a=$(echo $s2 \| cut -d":" -f1)
	832	if [[ $(echo $s2 \| grep -c ":") = 0 ]]
	833	then
	834	s2b=""
	835	s2c=""
	836	else
[69]	837	# echo $s2 \| cut -d":" -f2-3 \| sed 's/:/ /g' \| read s2b s2c
	838	s2b=`echo $s2 \| cut -d":" -f2 \| sed 's/:/ /g'`
	839	s2c=`echo $s2 \| cut -d":" -s -f3 \| sed 's/:/ /g'`
[1]	840	fi
[69]	841	# echo $zeile \| cut -d" " -f3-6 \| read s3 s4 s5 s6
	842	s3=`echo $zeile \| cut -d" " -f3`
	843	s4=`echo $zeile \| cut -d" " -s -f4`
	844	s5=`echo $zeile \| cut -d" " -s -f5`
	845	s6=`echo $zeile \| cut -d" " -s -f6`
[1]	846
	847
	848	# ABSPEICHERN DER DATEIVERBINDUNG, FALLS IN INPUT- ODER OUTPUT-LIST
	849	# VERMERKT. VARIABLE S3 KANN AUCH LISTE ENTHALTEN (FELDTRENNER ":")
	850	# DATEIVERBINDUNG WIRD DANN NICHT ABGESPEICHERT UND GEPRUEFT, WENN
	851	# PROGRAMMLAUF AUF REMOTE-MASCHINE ERFOLGT UND DATEI NUR LOKAL VOR-
	852	# HANDEN SEIN MUSS (D.H. s2b = loc)
	853	IFSALT="$IFS"; IFS="$IFS:"
	854	if [[ "$s2a" = in && ! ( $do_remote = true && ( "$s2b" = loc \|\| "$s2b" = locopt ) ) ]]
	855	then
	856	found=false
	857	for actual in $input_list
	858	do
	859	for formal in $s3
	860	do
	861	[[ $actual = $formal \|\| "$formal" = "-" ]] && found=true
	862	done
	863	done
	864	if [[ $found = true ]]
	865	then
	866	(( iin = iin + 1 ))
	867	localin[$iin]=$s1; transin[$iin]=$s2b; actionin[$iin]=$s2c;
	868	typein[$iin]=$s3; pathin[$iin]=$s4; endin[$iin]=$s5;
	869	extin[$iin]=$s6
	870	fi
	871	elif [[ "$s2a" = out && ! ( $do_remote = true && "$s2b" = loc ) ]]
	872	then
	873	found=false
	874	for actual in $output_list
	875	do
	876	for formal in $s3
	877	do
	878	[[ $actual = $formal \|\| "$formal" = "-" ]] && found=true
	879	done
	880	done
	881	if [[ $found = true ]]
	882	then
	883	(( iout = iout + 1 ))
	884	localout[$iout]=$s1; actionout[$iout]=$s2c; typeout[$iout]=$s3;
	885	pathout[$iout]=$s4; endout[$iout]=$s5; extout[$iout]=$s6
	886	fi
	887	elif [[ "$s2a" != in && "$s2a" != out ]]
	888	then
	889	printf "\n +++ I/O-attribute in configuration file $config_file has the invalid"
	890	printf "\n value \"$s2\". Only \"in\" and \"out\" are allowed!"
	891	locat=connect; exit
	892	fi
	893	IFS="$IFSALT"
	894	fi
	895	done < $config_file
	896
	897	else
	898
	899
	900	# INTERPRETATION DER KONFIGURATIONSDATEI MITTELS FORTRAN 90 - PROGRAMM
	901	[[ $silent = false ]] && printf "..."
	902	export cond1 cond2 config_file do_remote do_trace input_list localhost output_list
	903	export interpreted_config_file=.icf.$RANDOM
	904
	905
[69]	906
	907	# ENVIRONMENT-VARIABLEN FUER INTERPRET_CONFIG UEBER NAMELIST_DATEI ZUR
	908	# VERFUEGUNG STELLEN
	909	cat > .mrun_environment << %%END%%
	910	&mrun_environment cond1 = '$cond1', cond2 = '$cond2',
	911	config_file = '$config_file', do_remote = '$do_remote',
	912	do_trace = '$do_trace', host = '$host',
	913	input_list = '$input_list', icf = '$interpreted_config_file',
	914	localhost = '$localhost', output_list = '$output_list' /
	915
	916	%%END%%
	917
	918	# WERTE VON MRUN-OPTIONEN SICHERN UND DAMIT GEGEBENENFALLS SPAETER DIE
	919	# IN DER KONFIGURAIONSDATEI ANGEGEBENEN WERTE UEBERSTEUERN
	920	mrun_memory=$memory
[127]	921	mrun_group_number=$group_number
[69]	922	mrun_cpumax=$cpumax
	923	mrun_numprocs=$numprocs
	924
[66]	925	if [[ $localhost_realname = "gate" ]]
	926	then
	927	interpret_config_gate.x
	928	else
	929	interpret_config.x
	930	fi
[71]	931	rm .mrun_environment
[1]	932
[71]	933
[1]	934	# AUSFUEHRUNG DER GENERIERTEN SHELL-KOMMANDOS IN DIESER SHELL
	935	chmod u+x $interpreted_config_file
	936	export PATH=$PATH:.
	937	. $interpreted_config_file
[71]	938	rm $interpreted_config_file
[1]	939
[71]	940
[69]	941	# OPTIONSWERTE UEBERSTEUERN KONFIGURATIONSDATEI
[71]	942	[[ $mrun_memory != 0 ]] && memory=$mrun_memory
[127]	943	[[ "$mrun_group_number" != "none" ]] && group_number=$mrun_group_number
[71]	944	[[ $mrun_cpumax != 0 ]] && cpumax=$mrun_cpumax
	945	[[ "$mrun_numprocs" != "" ]] && numprocs=$mrun_numprocs
[69]	946
[1]	947	fi
	948
	949
	950	# QUELLTEXTVERZEICHNIS AUF LOKALER MASCHINE AUS KONFIGURATIONSDATEI
	951	# BESTIMMEN (WUERDE SONST EVTL. DAS VERZEICHNIS DES JEWEILS UNTER -h
	952	# ANGEGEBENEN REMOTE-RECHNERS SEIN)
	953	# BEI BATCH-JOBS SIND DIE ZU UEBERSETZENDEN PROGRAMMTEILE SCHON KOMPLETT
	954	if [[ "$SOURCES_COMPLETE" = "" ]]
	955	then
	956
	957	# ZUERST PRUEFEN, OB EIN GLOBALER QUELLTEXTPFAD FUER ALLE RECHNER
	958	# VEREINBART WURDE
	959	source_path=""
	960	line=""
	961	grep "%source_path" $config_file > tmp_mrun
	962	while read line
	963	do
	964	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
	965	then
	966	if [[ "$(echo $line \| cut -d" " -f3)" = "" ]]
	967	then
	968	global_source_path=`echo $line \| cut -d" " -f2`
	969	fi
	970	fi
	971	done < tmp_mrun
	972
	973	line=""
	974	found=false
	975	grep " $localhost" $config_file \| grep "%source_path" > tmp_mrun
	976	while read line
	977	do
	978	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
	979	then
	980	if [[ $found = true ]]
	981	then
	982	printf "\n\n +++ more than one source path found in configuration file"
	983	printf "\n for local host \"$localhost\" "
	984	locat=source_path; exit
	985	fi
	986	source_path=`echo $line \| cut -d" " -f2`
	987	found=true
	988	fi
	989	done < tmp_mrun
	990	rm tmp_mrun
	991
	992	if [[ "$source_path" = "" ]]
	993	then
	994	if [[ "$global_source_path" != "" ]]
	995	then
	996	source_path=$global_source_path
	997	else
	998	printf "\n\n +++ no source path found in configuration file"
	999	printf "\n for local host \"$localhost\" "
	1000	locat=source_path; exit
	1001	fi
	1002	fi
	1003	eval source_path=$source_path
	1004
	1005	if [[ ! -d $source_path ]]
	1006	then
	1007	printf "\n\n +++ source path \"$source_path\" on local host"
	1008	printf "\n \"$localhost\" does not exist"
	1009	locat=source_path; exit
	1010	fi
	1011
	1012	fi
	1013
	1014
[78]	1015	# GLOBALE REVISIONSNUMMER ERMITTELN (FORTSETZUNGSLAEUFEN WIRD DIESE
	1016	# DURCH OPTION -G MITGETEILT)
	1017	if [[ "$global_revision" = "" ]]
	1018	then
	1019	global_revision=`svnversion $source_path 2>/dev/null`
	1020	global_revision="Rev: $global_revision"
	1021	fi
[1]	1022
[78]	1023
[1]	1024	# NOCHMAL PRUEFEN, OB AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL
	1025	# (HOST KANN IN KONFIGURATIONSDATEI ANDERS FESTGELEGT WORDEN SEIN)
	1026	# WERT VON do_remote WIRD FUER DATEIVERBINDUNGEN BENOETIGT.
	1027	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
	1028	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
	1029	if [[ -n $host && "$host" != $localhost ]]
	1030	then
	1031	do_batch=true
	1032	do_remote=true
	1033	case $host in
[206]	1034	(ibm\|ibmb\|ibmh\|ibms\|ibmy\|lcsgib\|lcsgih\|lctit\|nech\|neck\|unics\|lcxt4) true;;
[1]	1035	(*) printf "\n"
[83]	1036	printf "\n +++ sorry: execution of batch jobs on remote host \"$host\""
	1037	printf "\n is not available"
[1]	1038	locat=nqs; (( iec = 0 )); exit;;
	1039	esac
	1040	else
	1041	host=$localhost
	1042	fi
	1043
	1044
	1045	# PRUEFUNG EINIGER PROZESSORZAHLANGABEN BEI RECHNUNGEN AUF PARALLELRECHNERN
	1046	if [[ "$cond1" = parallel \|\| "$cond2" = parallel ]]
	1047	then
	1048
	1049	# PRUEFEN, OB DIE ANZAHL DER ZU VERWENDENDEN PES ANGEGEBEN WURDE
	1050	if [[ ! -n $numprocs ]]
	1051	then
	1052	printf "\n"
	1053	printf "\n +++ option \"-K parallel\" requires additional specification"
	1054	printf "\n of the number of processors to be used by"
	1055	printf "\n mrun-option \"-X\" or by environment-variable"
	1056	printf "\n \"numprocs\" in the configuration file"
	1057	locat=numprocs; (( iec = 0 )); exit
	1058	fi
	1059
	1060	# PRUEFEN, OB DIE PROZESSORANZAHL PRO KNOTEN ANGEGEBEN WURDE (GGF.
	1061	# DEFAULT-WERT SETZEN) UND OB SIE EIN GANZZAHLIGER TEILER DER
	1062	# GESAMTPROZESSORANZAHL IST
	1063	if [[ $host = nech \|\| $host = neck \|\| $host = ibmh \|\| $host = ibmb \|\| $host = ibms ]]
	1064	then
	1065	[[ "$tasks_per_node" = "" ]] && tasks_per_node=6
	1066	(( ival = $tasks_per_node ))
	1067	(( pes = numprocs ))
	1068	# if [[ $(echo $package_list \| grep -c dvrp_graphics+1PE) = 1 ]]
	1069	# then
	1070	# (( pes = pes - 1 ))
	1071	# fi
	1072	(( ii = pes / ival ))
	1073	if (( pes - ii * ival > 0 ))
	1074	then
	1075	printf "\n"
	1076	printf "\n +++ tasks per node (option \"-T\") must be an integral"
	1077	printf "\n divisor of the total number of processors (option \"-X\")"
	1078	printf "\n values of this mrun-call: \"-T $tasks_per_node\" \"-X $numprocs\""
	1079	locat=tasks_per_node; (( iec = 0 )); exit
	1080	fi
	1081	fi
	1082
	1083	# IBMY HAT NUR EINEN KNOTEN
	1084	if [[ $host = ibmy ]]
	1085	then
	1086	if [[ "$tasks_per_node" != "" && "$tasks_per_node" != "$numprocs" ]]
	1087	then
	1088	printf "\n"
	1089	printf "\n +++ on ibmy, tasks per node (option \"-T\") must be equal to the"
	1090	printf "\n total number of processors (option \"-X\")"
	1091	printf "\n values of this mrun-call: \"-T $tasks_per_node\" \"-X $numprocs\""
	1092	locat=tasks_per_node; (( iec = 0 )); exit
	1093	fi
	1094	fi
	1095
	1096	# FALLS OPENMP PARALLELISIERUNG VERWENDET WERDEN SOLL, ANZAHL VON THREADS
	1097	# SETZEN UND ZAHL DER TASKS PRO KNOTEN AUF 1 SETZEN
	1098	if [[ $use_openmp = true ]]
	1099	then
	1100	threads_per_task=$tasks_per_node
	1101	tasks_per_node=1
	1102	fi
	1103	OOPT="-O $threads_per_task"
	1104	TOPT="-T $tasks_per_node"
	1105
	1106	# GESAMTZAHL DER KNOTEN BESTIMMEN
	1107	if [[ "$tasks_per_node" != "" ]]
	1108	then
	1109	(( nodes = numprocs / ( tasks_per_node * threads_per_task ) ))
	1110	fi
	1111
	1112	# PRUEFEN, OB NODE USAGE EINEN ERLAUBTEN WERT HAT BZW. DEN DEFAULT
	1113	# SETZEN
	1114	if [[ $node_usage = default ]]
	1115	then
	1116	if [[ $host = ibms ]]
	1117	then
	1118	node_usage=shared
[118]	1119	elif [[ $host = lctit ]]
	1120	then
[129]	1121	node_usage=sla3
[181]	1122	elif [[ $(echo $host \| cut -c1-5) = lcsgi ]]
	1123	then
	1124	node_usage=singlejob
[1]	1125	else
	1126	node_usage=not_shared
	1127	fi
	1128	fi
[181]	1129
	1130	if [[ $node_usage != shared && $node_usage != not_shared && $node_usage != singlejob && "$(echo $node_usage \| cut -c1-3)" != "sla" && $node_usage != novice ]]
[1]	1131	then
	1132	printf "\n"
	1133	printf "\n +++ node usage (option \"-n\") is only allowed to be set"
	1134	printf "\n \"shared\" or \"not_shared\""
	1135	locat=tasks_per_node; (( iec = 0 )); exit
	1136	fi
	1137
	1138	fi
	1139
	1140	# PRUEFEN, OB HOSTFILE EXISTIERT
	1141	if [[ -n $hostfile ]]
	1142	then
	1143	if [[ ! -f $hostfile ]]
	1144	then
	1145	printf "\n"
	1146	printf "\n +++ hostfile \"$hostfile\" does not exist"
	1147	locat=hostfile; exit
	1148	fi
	1149	fi
	1150
	1151	# PRUEFEN, OB RHOSTS DATEI EXISTIERT. GEGEBENENFALLS ANLEGEN BZW. ERWEITERN
	1152	if [[ $host = ibmy && $do_remote = false ]]
	1153	then
	1154	if [[ ! -f $HOME/.rhosts ]]
	1155	then
	1156	echo "gfdl5.yonsei.ac.kr" > $HOME/.rhosts
	1157	printf "\n\n *** file:"
	1158	printf "\n $HOME/.rhosts"
	1159	printf "\n was created\n"
	1160	fi
	1161	if [[ $(grep -c gfdl5.yonsei.ac.kr $HOME/.rhosts) = 0 ]]
	1162	then
	1163	echo "gfdl5.yonsei.ac.kr" >> $HOME/.rhosts
	1164	printf "\n\n *** file:"
	1165	printf "\n $HOME/.rhosts"
	1166	printf "\n was extended by the name of the current host\n"
	1167	fi
	1168	fi
	1169
	1170
	1171
	1172	# FALLS NICHT VORGEGEBEN, DEFAULT-QUEUE AUF DER ZIELMASCHINE FESTLEGEN
	1173	if [[ $queue = none ]]
	1174	then
	1175	case $host in
	1176	(ibmb) if [[ $node_usage = shared ]]
	1177	then
	1178	queue=cshare
	1179	else
	1180	queue=csolo
	1181	fi;;
	1182	(ibmh) if [[ $node_usage = shared ]]
	1183	then
	1184	queue=cshare
	1185	else
	1186	queue=csolo
	1187	fi;;
	1188	(ibmy) queue=parallel;;
[191]	1189	(lcsgib) queue=bigq;;
	1190	(lcsgih) queue=bigq;;
[129]	1191	(lctit) queue=sla3;;
[1]	1192	(nech) queue=none;;
	1193	(neck) queue=P;;
	1194	(unics) queue=unics;;
	1195	esac
	1196	fi
	1197
	1198
	1199	# VOLLSTAENDIGE DATEINAMEN DER INPUT-FILES BILDEN,
	1200	# INPUT-DATEIEN AUF VORHANDENSEIN PRUEFEN UND EVTL. HOECHSTE ZYKLUSNUMMER
	1201	# ERMITTELN
	1202	(( i = 0 ))
	1203	while (( i < iin ))
	1204	do
	1205	(( i = i + 1 ))
	1206	(( maxcycle = 0 ))
	1207
	1208	# NAMENSBILDUNG (EVTL. IST FESTER DATEINAME VORGEGEBEN)
	1209	if [[ "${actionin[$i]}" = di ]]
	1210	then
	1211	remotepathin[$i]=${pathin[$i]}/${endin[$i]} # REMOTE-PFAD ERST AUF
	1212	# REM-MASCHINE AUSWERTEN
	1213	eval filename=${pathin[$i]}/${endin[$i]}
	1214	else
	1215	remotepathin[$i]=${pathin[$i]}/${afname}${endin[$i]} # REMOTE-PFAD ERST AUF
	1216	# REM-MASCHINE AUSWERTEN
	1217	eval filename=${pathin[$i]}/${afname}${endin[$i]}
	1218	fi
	1219
	1220	# PRUEFEN AUF VORHANDENSEIN
	1221	if [[ $(ls $filename* 2>&1 \| grep -c "not found") = 1 \|\| \
	1222	$(ls $filename* 2>&1 \| grep -c "No such file") = 1 \|\| \
	1223	$(ls $filename* 2>&1 \| grep -c "does not exist") = 1 ]]
	1224	then
	1225	# DATEIEN MIT EXTENSION (Z.B. NC) MUESSEN NICHT ZWINGEND VORHANDEN
	1226	# SEIN, DESHALB IN SOLCHEN FAELLEN KEIN ABBRUCH. DIES IST NUR EINE
	1227	# VORUEBERGEHENDE LOESUNG (OKT 05). NICHT ZWINGEND BENOETIGTE
	1228	# EINGABEDATEIEN SOLLTEN EINE SPEZIELLE OPTION IN DER DATEI-
	1229	# VERBINDUNGSANWEISUNG BEKOMMEN (Z.B. inopt?)
	1230	if [[ "${transin[$i]}" != "locopt" ]]
	1231	then
	1232	printf "\n\n +++ INPUT-file: "
	1233	if [[ "${extin[$i]}" = "" ]]
	1234	then
	1235	printf "\n $filename"
	1236	else
	1237	printf "\n $filename.${extin[$i]}"
	1238	fi
	1239	printf "\n does not exist\n"
	1240	locat=input; exit
	1241	else
	1242	transin[$i]="unavailable"
	1243	fi
	1244	else
	1245
	1246	# ZYKLUSNUMMER FESTSTELLEN
	1247	ls -1 -d $filename > filelist 2>/dev/null
	1248	ls -1 -d $filename.* >> filelist 2>/dev/null
	1249	while read zeile
	1250	do
	1251	cycle=$(print $zeile \| cut -f2 -d".")
	1252	if [[ "$cycle" = "$zeile" ]]
	1253	then
	1254	(( icycle = 0 ))
	1255	elif [[ "$cycle" = "${extin[$i]}" ]]
	1256	then
	1257	(( icycle = 0 ))
	1258	else
	1259	(( icycle = $cycle ))
	1260	fi
	1261	if (( icycle > maxcycle ))
	1262	then
	1263	(( maxcycle = icycle ))
	1264	file_to_be_used=$zeile
	1265	fi
	1266	done <filelist
	1267	rm filelist
	1268
	1269	# EVTL. ZYKLUSNUMMER AN DATEINAMEN ANFUEGEN
	1270	if (( maxcycle > 0 ))
	1271	then
	1272	if [[ "${extin[$i]}" != " " && "${extin[$i]}" != "" ]]
	1273	then
	1274	filename=${filename}.$maxcycle.${extin[$i]}
	1275	else
	1276	filename=${filename}.$maxcycle
	1277	fi
	1278	else
	1279	if [[ "${extin[$i]}" != " " && "${extin[$i]}" != "" ]]
	1280	then
	1281	filename=${filename}.${extin[$i]}
	1282	fi
	1283	fi
	1284
	1285	# DATEINAMEN OHNE PFAD ABER MIT ZYKLUSNUMMER ABSPEICHERN,
	1286	# DA SPAETER BEI RUECKSPEICHERN VOM ARCHIVSYSTEM EVTL. BENOETIGT
	1287	absnamein[$i]=$filename
	1288	if (( maxcycle > 0 ))
	1289	then
	1290	if [[ "${actionin[$i]}" = di ]]
	1291	then
	1292	frelin[$i]=${endin[$i]}.$maxcycle
	1293	else
	1294	frelin[$i]=${afname}${endin[$i]}.$maxcycle
	1295	fi
	1296	else
	1297	if [[ "${actionin[$i]}" = di ]]
	1298	then
	1299	frelin[$i]=${endin[$i]}
	1300	else
	1301	frelin[$i]=${afname}${endin[$i]}
	1302	fi
	1303	fi
	1304
	1305	fi
	1306	done
	1307
	1308
	1309	# VOLLSTAENDIGE DATEINAMEN (OHNE $ ODER ~) DER OUTPUT-FILES BILDEN,
	1310	# OUTPUT-DATEIEN AUF VORHANDENSEIN PRUEFEN UND EVTL. HOECHSTE ZYKLUSNUMMER
	1311	# ERMITTELN ODER, FALLS NICHT VORHANDEN, PRUEFEN, OB SIE SICH ANLEGEN LASSEN
	1312	# DIESE AKTIONEN FINDEN NICHT STATT, WENN PROGRAMM AUF REMOTE-MASCHINE
	1313	# RECHNET UND DATEI ANSCHLIESSEND TRANSFERIERT WERDEN SOLL!
	1314	(( i = 0 ))
	1315	while (( i < iout ))
	1316	do
	1317	(( i = i + 1 ))
	1318	if [[ ! ( $fromhost != $localhost && ( "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = tra \|\| "${actionout[$i]}" = trpe ) ) ]]
	1319	then
	1320	if [[ "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = trpe ]]
	1321	then
	1322	actionout[$i]=""
	1323	elif [[ "${actionout[$i]}" = tra ]]
	1324	then
	1325	actionout[$i]=a
	1326	fi
	1327	(( maxcycle = 0 ))
	1328	eval filename=${pathout[$i]}/${fname}${endout[$i]}
	1329	eval catalogname=${pathout[$i]}
	1330	if [[ $(ls $filename* 2>&1 \| grep -c "not found") = 1 \|\| \
	1331	$(ls $filename* 2>&1 \| grep -c "No such file") = 1 \|\| \
	1332	$(ls $filename* 2>&1 \| grep -c "does not exist") = 1 ]]
	1333	then
	1334
	1335	# OUTPUT-DATEI NICHT VORHANDEN. PRUEFEN, OB ANLEGEN MOEGLICH.
	1336	if cat /dev/null > $filename
	1337	then
	1338	rm $filename
	1339	else
	1340
	1341	# PRUEFEN, OB KATALOG VORHANDEN UND EVTL. DIESEN ANLEGEN
	1342	if [[ ! -d $catalogname ]]
	1343	then
	1344	if mkdir -p $catalogname
	1345	then
	1346	printf "\n\n *** directory:"
	1347	printf "\n $catalogname"
	1348	printf "\n was created\n"
	1349	else
	1350	printf "\n\n +++ OUTPUT-file:"
	1351	printf "\n $filename"
	1352	printf "\n cannot be created, because directory does not exist"
	1353	printf "\n and cannot be created either"
	1354	printf "\n"
	1355	locat=output ; exit
	1356	fi 2>/dev/null
	1357	else
	1358	printf "\n\n +++ OUTPUT-file:"
	1359	printf "\n $filename"
	1360	printf "\n cannot be created, although directory exists"
	1361	printf "\n"
	1362	locat=output ; exit
	1363	fi
	1364	fi 2>/dev/null
	1365	else
	1366
	1367	# ZYKLUSNUMMER FESTSTELLEN
	1368	ls -1 -d $filename > filelist 2>/dev/null
	1369	ls -1 -d $filename.* >> filelist 2>/dev/null
	1370	while read zeile
	1371	do
	1372	cycle=$(print $zeile \| cut -f2 -d".")
	1373	if [[ "$cycle" = "$zeile" \|\| "$cycle" = ${extout[$i]} ]]
	1374	then
	1375	(( icycle = 1 ))
	1376	else
	1377	(( icycle = $cycle + 1 ))
	1378	fi
	1379	if (( icycle > maxcycle ))
	1380	then
	1381	(( maxcycle = icycle ))
	1382	fi
	1383	done <filelist
	1384	rm filelist
	1385	fi
	1386
	1387	# EVTL. ZYKLUSNUMMER AN DATEINAMEN ANFUEGEN UND PRUEFEN, OB SICH
	1388	# DATEI AUCH WIRKLICH ANLEGEN LAESST. IM APPEND-FALL MUSS AN DEN
	1389	# HOECHSTEN VORHANDENEN ZYKLUS-ANGEHAENGT WERDEN. ANLAGEPRUEFUNG
	1390	# IST DANN NATUERLICH NICHT ZULAESSIG BZW. MOEGLICH
	1391	if [[ "${actionout[$i]}" != a ]]
	1392	then
	1393	if (( maxcycle > 0 ))
	1394	then
	1395	filename=${filename}.$maxcycle
	1396	if cat /dev/null > $filename
	1397	then
	1398	rm $filename
	1399	else
	1400	printf "\n +++ OUTPUT-file:"
	1401	printf "\n $filename"
	1402	printf "\n cannot be created"
	1403	locat=output ; exit
	1404	fi
	1405	fi
	1406	else
	1407	(( maxcycle = maxcycle - 1 ))
	1408	if (( maxcycle > 0 ))
	1409	then
	1410	filename=${filename}.$maxcycle
	1411	fi
	1412	fi
	1413
	1414	# DATEINAMEN OHNE PFAD ABER MIT ZYKLUSNUMMER ABSPEICHERN,
	1415	# DA SPAETER BEI ABLAGE AUF ARCHIVSYSTEM BZW. FUER
	1416	# DATEI OUTPUT_FILE_CONNECTIONS EVTL. BENOETIGT
	1417	pathout[$i]=$filename
	1418	if (( maxcycle > 0 ))
	1419	then
	1420	frelout[$i]=${fname}${endout[$i]}.$maxcycle
	1421	else
	1422	frelout[$i]=${fname}${endout[$i]}
	1423	fi
	1424
	1425	fi
	1426	done
	1427
	1428
[83]	1429	# DAS DVRP-PAKET ERFORDERT EINE ENTSPRECHENDE BIBLIOTHEK
	1430	if [[ $(echo $package_list \| grep -c dvrp_graphics) != 0 ]]
	1431	then
	1432	if [[ "$dvrp_inc" = "" ]]
	1433	then
	1434	printf "\n\n +++ no value for \"dvrp_inc\" given in configuration file"
	1435	printf "\n This is required for the dvrp_graphics package.\n"
	1436	locat=dvrp; exit
	1437	fi
	1438	if [[ "$dvrp_lib" = "" ]]
	1439	then
	1440	printf "\n\n +++ no value for \"dvrp_lib\" given in configuration file"
	1441	printf "\n This is required for the dvrp_graphics package.\n"
	1442	locat=dvrp; exit
	1443	fi
	1444	fi
	1445
	1446
[1]	1447	# PRUEFEN, OB ENTWEDER HAUPTPROGRAMM ODER NUR EIN AUSFUEHRBARES
	1448	# PROGRAMM VEREINBART WURDE (IN DIESEM FALL BRAUCHT IM WEITEREN NICHT
	1449	# UEBERSETZT ZU WERDEN)
	1450	if [[ "$mainprog" = "" && "$executable" = "" ]]
	1451	then
	1452	printf "\n +++ neither main program nor executable defined"
	1453	locat=source; exit
	1454	elif [[ "$mainprog" != "" && "$executable" != "" ]]
	1455	then
	1456	printf "\n +++ main program as well as executable defined"
	1457	locat=source; exit
	1458	elif [[ "$mainprog" = "" && "$executable" != "" ]]
	1459	then
	1460	do_compile=false
	1461	fi
	1462
	1463
[191]	1464	# SOURCE-VERZEICHNIS ZUM AUFSAMMELN DER ZU UEBERSETZENDEN PROGRAMMTEILE
	1465	# ERZEUGEN. HIERHIN WERDEN SPAETER IM FALL VON BATCH-JOBS AUCH DAS MRUN-
	1466	# SCRIPTS SOWIE DIE KONFIGURATIONSDATEI KOPIERT
[193]	1467	if [[ $restart_run != true && "$SOURCES_COMPLETE" = "" ]]
[191]	1468	then
	1469	rm -rf SOURCES_FOR_RUN_$fname
	1470	mkdir SOURCES_FOR_RUN_$fname
	1471	fi
	1472
	1473
[1]	1474	# ALLE ZU UEBERSETZENDEN PROGRAMMTEILE ZUSAMMENSAMMELN
	1475	# BEI BATCH-JOBS IST DIES NICHT NOETIG, WEIL DIE PROGRAMMTEILE BEREITS DURCH
	1476	# DEN MRUN-AUFRUF ERMITTELT SIND, DER DEN BATCH-JOB GENERIERT HAT, UND
	1477	# IM VERZEICHNIS SOURCES_FOR_RUN_... ABGELEGT SIND
	1478	if [[ $do_compile = true && "$SOURCES_COMPLETE" = "" ]]
	1479	then
	1480
[5]	1481	[[ "$source_list" = LM ]] && source_list=LOCALLY_MODIFIED
	1482	[[ "$source_list" = WP ]] && source_list=WRITE_PERMIT
[1]	1483
	1484
	1485	# EVTL. ZU UEBERSETZENDE PROGRAMMTEILE DADURCH BESTIMMEN, DASS GEPRUEFT
	1486	# WIRD, WELCHE DATEIEN WRITE-PERMIT BESITZEN (DATEIEN SOLLTEN DESHALB
	1487	# UNTER RCS-KONTROLLE STEHEN). MIT DER VARIABLEN EXCLUDE KOENNEN
	1488	# BESTIMMTE DATEIEN GRUNDSAETZLICH VON DER UEBERSETZUNG AUSGESCHLOSSEN
	1489	# WERDEN. DIES IST NUR BEI MANUELLEM START VON MRUN DURCH DEN BENUTZER
	1490	# MOEGLICH, DA BEI AUTOMATISCHEN RESTARTS TEST DURCH DIE TATSAECHLICH
	1491	# ZU UBERSETZENDEN DATEIEN ERSETZT IST.
	1492	# ALLE ERMITTELTEN DATEIEN WERDEN IM VERZEICHNIS SOURCES_FOR_RUN_...
	1493	# GESAMMELT
[5]	1494	if [[ "$source_list" = WRITE_PERMIT ]]
[1]	1495	then
	1496
	1497	source_list=""
	1498	cd $source_path
	1499
	1500
	1501	# ALLE MOEGLICHEN QUELLCODEDATEIEN AUFLISTEN
	1502	Names=$(ls -1 *.f90 2>&1)
	1503	[[ $(echo $Names \| grep -c '*.f90') = 0 ]] && Filenames="$Names"
	1504	Names=$(ls -1 *.F90 2>&1)
	1505	[[ $(echo $Names \| grep -c '*.F90') = 0 ]] && Filenames="$Filenames $Names"
	1506	Names=$(ls -1 *.F 2>&1)
	1507	[[ $(echo $Names \| grep -c '*.F') = 0 ]] && Filenames="$Filenames $Names"
	1508	Names=$(ls -1 *.f 2>&1)
	1509	[[ $(echo $Names \| grep -c '*.f') = 0 ]] && Filenames="$Filenames $Names"
	1510	Names=$(ls -1 *.c 2>&1)
	1511	[[ $(echo $Names \| grep -c '*.c') = 0 ]] && Filenames="$Filenames $Names"
	1512
	1513
	1514	# DATEIEN MIT WRITE-PERMIT NACH SOURCES_FOR_RUN_... KOPIEREN
	1515	for dateiname in $Filenames
	1516	do
	1517	if [[ -w $dateiname ]]
	1518	then
	1519	if [[ "$exclude" = "" \|\| $(echo $exclude \| grep -c $dateiname) = 0 ]]
	1520	then
	1521	cp $dateiname $working_directory/SOURCES_FOR_RUN_$fname
	1522	source_list=$source_list"$dateiname "
	1523	fi
	1524	fi
	1525	done
	1526
	1527	cd - > /dev/null
	1528
	1529
[5]	1530	elif [[ "$source_list" = LOCALLY_MODIFIED ]]
	1531	then
	1532
	1533	# MODIFIZIERTE DATEIEN DER SVN-ARBEITSKOPIE BESTIMMEN
	1534	source_list=""
	1535	cd $source_path
	1536
	1537
	1538	# PRUEFEN, OB VERZEICHNIS UEBERHAUPT UNTER SVN-KONTROLLE STEHT
	1539	if [[ ! -d .svn ]]
	1540	then
	1541	printf "\n\n +++ source directory"
	1542	printf "\n \"$source_path\" "
	1543	printf "\n is not under control of \"subversion\"."
	1544	printf "\n Please do not use mrun-option \"-s LOCALLY MODIFIED\"\n"
	1545	fi
	1546
	1547
	1548	# ALLE MODIFIZIERTEN QUELLCODEDATEIEN AUFLISTEN
	1549	Filenames=""
[69]	1550	svn status > tmp_mrun
	1551	while read line
[5]	1552	do
	1553	firstc=`echo $line \| cut -c1`
	1554	if [[ $firstc = M \|\| $firstc = "?" ]]
	1555	then
	1556	Name=`echo "$line" \| cut -c8-`
	1557	extension=`echo $Name \| cut -d. -f2`
	1558	if [[ "$extension" = f90 \|\| "$extension" = F90 \|\| "$extension" = f \|\| "$extension" = F \|\| "$extension" = c ]]
	1559	then
	1560	Filenames="$Filenames "$Name
	1561	fi
	1562	fi
[69]	1563	done < tmp_mrun
[5]	1564
	1565
	1566	# DATEIEN NACH SOURCES_FOR_RUN_... KOPIEREN
	1567	for dateiname in $Filenames
	1568	do
	1569	cp $dateiname $working_directory/SOURCES_FOR_RUN_$fname
	1570	source_list=$source_list"$dateiname "
	1571	done
	1572
	1573	cd - > /dev/null
	1574
	1575
[1]	1576	# MITTELS OPTION -s ANGEGEBENE DATEIEN NACH SOURCES_FOR_RUN_... KOPIEREN
	1577	# BEI AUTOMATISCHEN FORTSETZUNGSLAEUFEN SIND DORT SCHON ALLE DATEIEN
	1578	# VORHANDEN
[5]	1579	elif [[ "$source_list" != "" && $restart_run != true ]]
[1]	1580	then
	1581
	1582	cd $source_path
	1583
	1584	for filename in $source_list
	1585	do
	1586
	1587	# QUELLTEXT-DATEI DARF KEINE PFADE BEINHALTEN
	1588	if [[ $(print $filename \| grep -c "/") != 0 ]]
	1589	then
	1590	printf "\n +++ source code file: $filename"
	1591	printf "\n must not contain (\"/\") "
	1592	locat=source; exit
	1593	fi
	1594
	1595	if [[ ! -f $filename ]]
	1596	then
	1597	printf "\n +++ source code file: $filename"
	1598	printf "\n does not exist"
	1599	locat=source; exit
	1600	else
	1601	cp $filename $working_directory/SOURCES_FOR_RUN_$fname
	1602	fi
	1603
	1604	done
	1605
	1606	cd - > /dev/null
	1607
	1608	fi
	1609
	1610
	1611	# PRUEFEN, OB ENTWEDER HAUPTPROGRAMM VORHANDEN UND ES EVTL. IN DER
	1612	# LISTE DER ZU UEBERSETZENDEN PROGRAMMTEILE MIT ENTHALTEN IST (WENN
	1613	# NICHT, WIRD ES DIESER LISTE HINZUGEFUEGT)
[5]	1614	if [[ $restart_run != true ]]
[1]	1615	then
	1616
	1617	if [[ ! -f "$source_path/$mainprog" ]]
	1618	then
	1619	printf "\n\n +++ main program: $mainprog"
	1620	printf "\n does not exist in source directory"
	1621	printf "\n \"$source_path\"\n"
	1622	locat=source; exit
	1623	else
	1624	if [[ $(echo $source_list \| grep -c $mainprog) = 0 ]]
	1625	then
	1626	cp $source_path/$mainprog SOURCES_FOR_RUN_$fname
	1627	source_list=${mainprog}" $source_list"
	1628	fi
	1629	fi
	1630	fi
	1631
	1632
[211]	1633	# MAKEFILE AUF VORHANDENSEIN PRUEFEN UND KOPIEREN
	1634	# BEI RESTART-LAEUFEN LIEGT ES SCHON IM VERZEICHNIS SOURCES_FOR_RUN...
	1635	if [[ "$restart_run" != true ]]
	1636	then
	1637	[[ "$makefile" = "" ]] && makefile=$source_path/Makefile
	1638	if [[ ! -f $makefile ]]
	1639	then
	1640	printf "\n +++ file \"$makefile\" does not exist"
	1641	locat=make; exit
	1642	else
	1643	cp $makefile SOURCES_FOR_RUN_$fname/Makefile
	1644	fi
	1645	fi
	1646
	1647
[1]	1648	# DATEIEN AUS ZUSAETZLICHEM QUELLVERZEICHNIS HINZUFUEGEN
[5]	1649	if [[ $restart_run != true && "$add_source_path" != "" ]]
[1]	1650	then
	1651
	1652	# GIBT ES DAS VERZEICHNIS UEBERHAUPT?
	1653	if [[ ! -d $add_source_path ]]
	1654	then
	1655	printf "\n\n +++ WARNING: additional source code directory"
	1656	printf "\n \"$add_source_path\" "
	1657	printf "\n does not exist or is not a directory."
	1658	printf "\n No source code will be used from this directory!\n"
	1659	add_source_path=""
	1660	sleep 3
	1661	else
	1662
	1663	cd $add_source_path
[211]	1664	found=false
[1]	1665
	1666	Names=$(ls -1 *.f90 2>&1)
	1667	[[ $(echo $Names \| grep -c '*.f90') = 0 ]] && AddFilenames="$Names"
	1668	Names=$(ls -1 *.F90 2>&1)
	1669	[[ $(echo $Names \| grep -c '*.F90') = 0 ]] && AddFilenames="$AddFilenames $Names"
	1670	Names=$(ls -1 *.F 2>&1)
	1671	[[ $(echo $Names \| grep -c '*.F') = 0 ]] && AddFilenames="$AddFilenames $Names"
	1672	Names=$(ls -1 *.f 2>&1)
	1673	[[ $(echo $Names \| grep -c '*.f') = 0 ]] && AddFilenames="$AddFilenames $Names"
	1674	Names=$(ls -1 *.c 2>&1)
	1675	[[ $(echo $Names \| grep -c '*.c') = 0 ]] && AddFilenames="$AddFilenames $Names"
	1676
	1677	cd - > /dev/null
	1678	cd SOURCES_FOR_RUN_$fname
	1679
[211]	1680	# COPY MAKEFILE IF EXISTING
	1681	if [[ -f $add_source_path/Makefile ]]
	1682	then
	1683	printf "\n\n *** user Makefile from directory"
	1684	printf "\n \"$add_source_path\" is used \n"
	1685	sleep 1
	1686	cp $add_source_path/Makefile .
	1687	fi
	1688
[1]	1689	for dateiname in $AddFilenames
	1690	do
	1691	if [[ -f $dateiname ]]
	1692	then
	1693	printf "\n +++ source code file \"$dateiname\" found in additional"
	1694	printf "\n source code directory \"$add_source_path\" "
[211]	1695	printf "\n but was also given with option \"-s\" which means that it should be taken"
	1696	printf "\n from directory \"$source_path\"."
[1]	1697	locat=source; exit
	1698	fi
	1699
	1700	cp $add_source_path/$dateiname .
	1701	source_list="$source_list $dateiname"
	1702
[211]	1703	# CHECK IF FILE IS CONTAINED IN MAKEFILE
	1704	if [[ $(grep -c $dateiname Makefile) = 0 ]]
	1705	then
	1706	printf "\n\n +++ user file \"$dateiname\" "
	1707	printf "\n is not listed in Makefile \n"
	1708	locat=source; exit
	1709	else
	1710
[1]	1711	# Default User-Interface von der Liste entfernen, falls Datei
	1712	# ein User-Interface enthaelt
[211]	1713	# if [[ $( cat $dateiname \| grep -c "END SUBROUTINE user_parin" ) != 0 ]]
	1714	# then
	1715	# if [[ $dateiname != user_interface.f90 && -f user_interface.f90 ]]
	1716	# then
	1717	# rm -rf user_interface.f90
	1718	# source_list=`echo $source_list \| sed -e 's/user_interface.f90//'`
	1719	# printf "\n\n *** default \"user_interface.f90\" removed from the files to be translated"
	1720	# printf "\n since a user-interface is found in file"
	1721	# printf "\n \"$add_source_path/$dateiname\" \n"
	1722	# sleep 3
	1723	# else
	1724	if [[ $found = false ]]
[1]	1725	then
[211]	1726	found=true
	1727	printf "\n\n *** following user file(s) added to the"
	1728	printf " files to be translated:\n "
[1]	1729	fi
[211]	1730	printf "$dateiname "
	1731	sleep 0.5
[1]	1732	fi
	1733	done
[211]	1734	[[ $found = true ]] && printf "\n"
[1]	1735	cd - > /dev/null
	1736	fi
	1737	fi
	1738
	1739
	1740	# ALLE UNTERPROGRAMME, DIE ZU VEREINBARTEN SOFTWAREPAKETEN GEHOEREN,
	1741	# DER LISTE DER ZU UEBERSETZENDEN DATEIEN HINZUFUEGEN
[5]	1742	if [[ $restart_run != true && -n $package_list ]]
[1]	1743	then
	1744
	1745	cd $source_path
	1746
	1747	for package in $package_list
	1748	do
	1749
	1750	[[ $package = "dvrp_graphics+1PE" ]] && package=dvrp_graphics
	1751
	1752	# ERMITTELE ALLE DATEIEN, DIE ZUM PAKET GEHOEREN
	1753	# FEHLERMELDUNGEN WERDEN ABGEFANGEN, DA * AUCH VERZEICHNISSNAMEN
	1754	# LIEFERT
	1755	package_source_list=`grep "defined( __$package " * 2>/dev/null \| cut -f1 -d:`
	1756
	1757
	1758	# FUEGE DIESE DATEIEN DER LISTE DER ZU UEBERSETZENDEN DATEIEN
	1759	# HINZU, FALLS SIE NOCH NICHT DAZUGEHOEREN
	1760	for source_list_name in $package_source_list
	1761	do
	1762	if [[ $(echo $source_list \| grep -c $source_list_name) = 0 ]]
	1763	then
	1764
	1765	# NUR DATEIEN MIT GUELTIGEN ENDUNGEN VERWENDEN
	1766	ending=`echo $source_list_name \| cut -f2 -d.`
	1767	if [[ "$ending" = f90 \|\| "$ending" = F90 \|\| "$ending" = f \|\| "$ending" = F \|\| "$ending" = c ]]
	1768	then
	1769	cp $source_list_name $working_directory/SOURCES_FOR_RUN_$fname
	1770	source_list="$source_list $source_list_name"
	1771	fi
	1772	fi
	1773	done
	1774	done
	1775
	1776	cd - > /dev/null
	1777	fi
	1778
	1779
	1780	# MAKEFILE AUF VORHANDENSEIN PRUEFEN UND KOPIEREN
	1781	# BEI RESTART-LAEUFEN LIEGT ES SCHON IM VERZEICHNIS SOURCES_FOR_RUN...
[211]	1782	# if [[ "$restart_run" != true ]]
	1783	# then
	1784	# [[ "$makefile" = "" ]] && makefile=$source_path/Makefile
	1785	# if [[ ! -f $makefile ]]
	1786	# then
	1787	# printf "\n +++ file \"$makefile\" does not exist"
	1788	# locat=make; exit
	1789	# else
	1790	# cp $makefile SOURCES_FOR_RUN_$fname/Makefile
	1791	# fi
	1792	# fi
[1]	1793
	1794	fi # do_compile=true
	1795
	1796
	1797	# FALLS PROGRAMMTEILE UEBERSETZT WERDEN SOLLEN, FOLGEN JETZT EINIGE
	1798	# UEBERPRUEFUNGEN UND DAS SETZEN DER PRAEPROZESSOR-DIREKTIVEN
	1799	if [[ $do_compile = true ]]
	1800	then
	1801
	1802	# PRAEPROZESSOR-DIREKTIVEN ZUM SELEKTIVEN AUSWAEHLEN VON CODETEILEN
	1803	# ZUSAMMENSETZEN
[83]	1804	# DIREKTIVEN ZUM AKTIVIEREN VON RECHNERSPEZIFISCHEM CODE
[1]	1805	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
	1806	then
[82]	1807	cpp_options="${cpp_options},-D__ibm=__ibm"
[1]	1808	elif [[ $(echo $localhost \| cut -c1-3) = nec ]]
	1809	then
[82]	1810	cpp_options="$cpp_options -D__nec"
	1811	elif [[ $(echo $localhost \| cut -c1-2) = lc ]]
	1812	then
	1813	cpp_options="$cpp_options -D__lc"
[1]	1814	else
[82]	1815	cpp_options="$cpp_options -D__$localhost"
[1]	1816	fi
[83]	1817
	1818	# DIREKTIVEN DIE DURCH OPTION -K BESTIMMT WERDEN (Z.B. PARALLEL)
[1]	1819	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
	1820	then
[82]	1821	[[ -n $cond1 ]] && cpp_options="${cpp_options},-D__$cond1=__$cond1"
	1822	[[ -n $cond2 ]] && cpp_options="${cpp_options},-D__$cond2=__$cond2"
[1]	1823	else
[82]	1824	[[ -n $cond1 ]] && cpp_options="$cpp_options -D__$cond1"
	1825	[[ -n $cond2 ]] && cpp_options="$cpp_options -D__$cond2"
[1]	1826	fi
[83]	1827
	1828	# DIREKTIVEN DIE SOFTWAREPAKETE AKTIVIEREN (OPTION -p)
[1]	1829	if [[ -n $package_list ]]
	1830	then
	1831	for package in $package_list
	1832	do
	1833	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
	1834	then
	1835	if [[ $package != "dvrp_graphics+1PE" ]]
	1836	then
[82]	1837	cpp_options="${cpp_options},-D__$package=__$package"
[1]	1838	else
[82]	1839	cpp_options="${cpp_options},-D__dvrp_graphics=__dvrp_graphics"
[1]	1840	export use_seperate_pe_for_dvrp_output=true
	1841	fi
	1842	else
	1843	if [[ $package != "dvrp_graphics+1PE" ]]
	1844	then
[82]	1845	cpp_options="$cpp_options -D__$package"
[1]	1846	else
[82]	1847	cpp_options="$cpp_options -D__dvrp_graphics"
[1]	1848	export use_seperate_pe_for_dvrp_output=true
	1849	fi
	1850	fi
	1851	done
	1852	fi
[83]	1853
	1854	# DIREKTIVEN DIE DURCH OPTION -D FESTGELEGT SIND
[1]	1855	if [[ -n $cpp_opts ]]
	1856	then
	1857	for popts in $cpp_opts
	1858	do
[82]	1859	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
	1860	then
	1861	cpp_options="${cpp_options},-D__$popts=__$popts"
	1862	else
	1863	cpp_options="$cpp_options -D__$popts"
	1864	fi
[1]	1865	done
	1866	fi
	1867
	1868	else
	1869
	1870
	1871	# BEI LOKALEN RECHNUNGEN PRUEFEN, OB EXECUTABLE VORHANDEN
	1872	if [[ $do_remote = false ]]
	1873	then
	1874	if [[ ! -f $executable ]]
	1875	then
	1876	printf "\n +++ executable file: $executable"
	1877	printf "\n does not exist"
	1878	locat=executable; exit
	1879	fi
	1880	fi
	1881	fi
	1882
	1883
	1884	# JOBMODUS FESTSTELLEN
	1885	if [[ "$ENVIRONMENT" = BATCH && $localhost != lctit \|\| "$QUEUE" != interactive && $localhost = lctit ]]
	1886	then
	1887	jobmo=BATCH
	1888	else
	1889	jobmo=INTERACTIVE
	1890	fi
	1891
	1892
	1893	# HOSTSPEZIFISCHE DEFAULT-COMPILER SETZEN, FALLS NICHT BEREITS
	1894	# DURCH BENUTZER ANDERWEITIG VEREINBART
	1895	if [[ "$compiler_name" = "" ]]
	1896	then
[82]	1897
	1898	printf "\n +++ no compiler specified for \"$localhost $cond1 $cond2\""
	1899	locat=compiler_name; exit
	1900
[1]	1901	fi
	1902
	1903
	1904	# COMPILER AUF NECK UEBERSCHREIBEN
	1905	[[ $localhost = neck ]] && compiler_name=mpif90
	1906
	1907
	1908
	1909	# TEMPORAEREN KATALOGNAMEN BESTIMMEN
	1910	kennung=$RANDOM
	1911	if [[ "$tmp_user_catalog" = "" ]]
	1912	then
	1913	if [[ $localhost = ibmb \|\| $localhost = ibmh ]]
	1914	then
	1915	tmp_user_catalog=$TMPDIR
	1916	elif [[ $localhost = nech ]]
	1917	then
	1918	tmp_user_catalog=$WRKSHR
	1919	else
	1920	tmp_user_catalog=/tmp
	1921	fi
	1922	fi
	1923	TEMPDIR=$tmp_user_catalog/${usern}.$kennung
	1924
	1925
	1926	# KATALOGNAMEN FUER ZWISCHENSPEICHERUNG VON FORTSETZUNGSLAUFDATEIEN
	1927	# BESTIMMEN
	1928	if [[ "$tmp_data_catalog" = "" ]]
	1929	then
	1930	if [[ $localhost = ibmb \|\| $localhost = ibmh ]]
	1931	then
	1932	tmp_data_catalog=$WORK/mrun_restart_data
	1933	elif [[ $localhost = nech ]]
	1934	then
	1935	tmp_data_catalog=$WRKSHR/mrun_restart_data
	1936	else
	1937	tmp_data_catalog=/tmp/mrun_restart_data
	1938	fi
	1939	fi
	1940
	1941
	1942	# EVENTUELL BEI LOKALEN RECHNUNGEN $-ZEICHEN IN ENVIRONMENT-VARIABLEN
	1943	# ERSETZEN
	1944	if [[ $do_remote = false && $do_compile = true ]]
	1945	then
	1946	eval fopts=\"$fopts\"
	1947	eval lopts=\"$lopts\"
	1948	fi
	1949
	1950
	1951
	1952	# COMPILE- UND LINK-OPTIONEN BESTIMMEN
[82]	1953	fopts="$fopts $netcdf_inc $dvrp_inc"
	1954	lopts="$lopts $netcdf_lib $dvrp_lib"
[1]	1955	ROPTS="$ropts"
[179]	1956	if [[ ( $(echo $host \| cut -c1-3) = nec \|\| $(echo $host \| cut -c1-3) = ibm \|\| $host = lcsgih \|\| $host = lcsgib \|\| $host = lctit \|\| $host = lcfimm \|\| $host = lcxt4 ) && -n $numprocs ]]
[1]	1957	then
	1958	XOPT="-X $numprocs"
	1959	fi
	1960
	1961
	1962
	1963	# PRUEFEN DER CPU-ZEIT. (CPUMAX WIRD ALS ENV-VARIABLE VOM HAUTPRO-
	1964	# GRAMM BENOETIGT
	1965	done=false
	1966	while [[ $done = false ]]
	1967	do
	1968	cputime=$cpumax
	1969	if (( $cputime == 0 ))
	1970	then
	1971	printf "\n +++ cpu-time is undefined"
	1972	printf "\n >>> Please type CPU-time in seconds as INTEGER:"
	1973	printf "\n >>> "
	1974	read cputime 1>/dev/null 2>&1
	1975	else
	1976	done=true
	1977	fi
	1978	cpumax=$cputime
	1979	done
	1980
	1981	(( minuten = cputime / 60 ))
	1982	(( sekunden = cputime - minuten * 60 ))
	1983
	1984
	1985	# PRUEFEN DER KERNSPEICHERANFORDERUNG
	1986	if [[ $do_batch = true ]]
	1987	then
	1988	done=false
	1989	while [[ $done = false ]]
	1990	do
	1991	if (( memory == 0 ))
	1992	then
	1993	printf "\n +++ memory demand is undefined"
	1994	printf "\n >>> Please type memory in MByte per process as INTEGER:"
	1995	printf "\n >>> "
	1996	read memory 1>/dev/null 2>&1
	1997	else
	1998	done=true
	1999	fi
	2000	done
	2001	fi
	2002
	2003
	2004	# PRUEFEN, OB FUER REMOTE-RECHNUNGEN EIN BENUTZERNAME ANGEGEBEN WURDE
	2005	if [[ $do_remote = true && -z $remote_username ]]
	2006	then
	2007	while [[ -z $remote_username ]]
	2008	do
	2009	printf "\n +++ username on remote host \"$host\" is undefined"
	2010	printf "\n >>> Please type username:"
	2011	printf "\n >>> "
	2012	read remote_username
	2013	done
	2014	mc="$mc -u$remote_username"
	2015	fi
	2016
	2017	###########################################################################
	2018	# HEADER-AUSGABE
	2019	###########################################################################
	2020
	2021
	2022	calltime=$(date)
	2023	printf "\n"
	2024	# [[ $silent = false ]] && clear
	2025	printf "#--------------------------------------------------------------# \n"
	2026	printf "\| $version$calltime \| \n"
	2027	printf "\| \| \n"
	2028	spalte1="called on:"; spalte2=$localhost_realname
	2029	printf "\| $spalte1$spalte2 \| \n"
	2030	if [[ $local_compile = false ]]
	2031	then
	2032	if [[ $do_remote = true ]]
	2033	then
	2034	spalte1="execution on:"; spalte2="$host (username: $remote_username)"
	2035	else
	2036	spalte1="execution on:"; spalte2="$host ($localhost_realname)"
	2037	fi
	2038	else
	2039	spalte1="compiling test only!"; spalte2=""
	2040	fi
	2041	printf "\| $spalte1$spalte2 \| \n"
	2042	if [[ -n $numprocs ]]
	2043	then
	2044	spalte1="number of PEs:"; spalte2=$numprocs
	2045	printf "\| $spalte1$spalte2 \| \n"
	2046	fi
	2047	if [[ -n $tasks_per_node ]]
	2048	then
	2049	spalte1="tasks per node:"; spalte2="$tasks_per_node (number of nodes: $nodes)"
	2050	printf "\| $spalte1$spalte2 \| \n"
	2051	fi
	2052	if [[ $threads_per_task != 1 ]]
	2053	then
	2054	spalte1="threads per task:"; spalte2="$threads_per_task"
	2055	printf "\| $spalte1$spalte2 \| \n"
	2056	fi
	2057	printf "\| \| \n"
	2058	if [[ $do_compile = true ]]
	2059	then
[82]	2060	spalte1=cpp-directives:; spalte2=$cpp_options
[1]	2061	printf "\| $spalte1$spalte2 \| \n"
[82]	2062	zeile=$(echo "$cpp_options" \| cut -c41-)
[1]	2063	while [[ "$zeile" != "" ]]
	2064	do
	2065	spalte1=""
	2066	spalte2=$zeile
	2067	printf "\| $spalte1$spalte2 \| \n"
	2068	zeile=$(echo "$zeile" \| cut -c41-)
	2069	done
	2070
[82]	2071	spalte1=compiler-options:; spalte2="$fopts"
[1]	2072	printf "\| $spalte1$spalte2 \| \n"
[82]	2073	zeile=$(echo "$fopts" \| cut -c41-)
[1]	2074	while [[ "$zeile" != "" ]]
	2075	do
	2076	spalte1=""
	2077	spalte2=$zeile
	2078	printf "\| $spalte1$spalte2 \| \n"
	2079	zeile=$(echo "$zeile" \| cut -c41-)
	2080	done
	2081
[82]	2082	spalte1=linker-options:; spalte2=$lopts
[1]	2083	printf "\| $spalte1$spalte2 \| \n"
[82]	2084	zeile=$(echo "$lopts" \| cut -c41-)
[1]	2085	while [[ "$zeile" != "" ]]
	2086	do
	2087	spalte1=""
	2088	spalte2=$zeile
	2089	printf "\| $spalte1$spalte2 \| \n"
	2090	zeile=$(echo "$zeile" \| cut -c41-)
	2091	done
	2092
	2093	spalte1="main program":; spalte2=$mainprog
	2094	printf "\| $spalte1$spalte2 \| \n"
	2095	else
	2096	spalte1=executable:; spalte2=$executable
	2097	printf "\| $spalte1$spalte2 \| \n"
	2098	fi
	2099	printf "\| \| \n"
	2100	spalte1="base name of files":; spalte2=$fname
	2101	printf "\| $spalte1$spalte2 \| \n"
	2102	if [[ $fname != $afname ]]
	2103	then
	2104	spalte1="base name of input files":; spalte2=$afname
	2105	printf "\| $spalte1$spalte2 \| \n"
	2106	fi
	2107	spalte1="INPUT control list":; spalte2=$input_list
	2108	printf "\| $spalte1$spalte2 \| \n"
	2109	spalte1="OUTPUT control list":; spalte2=$output_list
	2110	printf "\| $spalte1$spalte2 \| \n"
	2111
	2112	if [[ $do_batch = true \|\| "$LOADLBATCH" = yes ]]
	2113	then
	2114	spalte1="memory demand / PE":; spalte2="$memory MB"
	2115	printf "\| $spalte1$spalte2 \| \n"
	2116	spalte1=CPU-time:; spalte2="$minuten:$sekunden"
	2117	printf "\| $spalte1$spalte2 \| \n"
	2118	fi
	2119
	2120	if [[ $do_compile = true ]]
	2121	then
	2122	printf "\| \| \n"
	2123	printf "\| Files to be compiled: \| \n"
	2124	zeile=$source_list
	2125	while [[ "$zeile" != "" ]]
	2126	do
	2127	spalte3=$zeile
	2128	printf "\| $spalte3 \| \n"
	2129	zeile=$(echo "$zeile" \| cut -c61-)
	2130	done
	2131	fi
	2132	printf "#--------------------------------------------------------------#"
	2133
	2134
	2135
	2136	# BEDINGTE AUSGABE DER DATEIVERBINDUNGEN
	2137	if [[ $do_trace = true ]]
	2138	then
	2139	(( i = 0 ))
	2140	while (( i < iin ))
	2141	do
	2142	(( i = i + 1 ))
	2143	if (( i == 1 ))
	2144	then
	2145	printf "\n\n >>> INPUT-file assignments:\n"
	2146	fi
	2147	printf "\n ${localin[$i]} : ${absnamein[$i]}"
	2148	done
	2149	(( i = 0 ))
	2150	while (( i < iout ))
	2151	do
	2152	(( i = i + 1 ))
	2153	if (( i == 1 ))
	2154	then
	2155	printf "\n\n >>> OUTPUT-file assignments:\n"
	2156	fi
	2157	printf "\n ${localout[$i]} : ${pathout[$i]}"
	2158	done
	2159	(( i = 0 ))
	2160	while (( i < iic ))
	2161	do
	2162	(( i = i + 1 ))
	2163	if (( i == 1 ))
	2164	then
	2165	printf "\n\n >>> INPUT-commands:\n"
	2166	fi
	2167	printf "\n ${in_command[$i]}"
	2168	done
	2169	(( i = 0 ))
	2170	while (( i < ioc ))
	2171	do
	2172	(( i = i + 1 ))
	2173	if (( i == 1 ))
	2174	then
	2175	printf "\n\n >>> OUTPUT-commands:\n"
	2176	fi
	2177	printf "\n ${out_command[$i]}"
	2178	done
	2179	fi
	2180
	2181
	2182	# ABFRAGEN BEI AUFRUF AUF LOKALER MASCHINE
	2183	if [[ $remotecall = false && $silent = false && $jobmo != BATCH ]]
	2184	then
	2185	antwort=dummy
	2186	printf "\n\n"
	2187	while [[ "$antwort" != y && "$antwort" != Y && "$antwort" != n && "$antwort" != N ]]
	2188	do
	2189	printf " >>> everything o.k. (y/n) ? "
	2190	read antwort
	2191	done
	2192	if [[ $antwort = n \|\| $antwort = N ]]
	2193	then
	2194	locat=user_abort; (( iec = 0 )); exit
	2195	fi
	2196	if [[ $do_batch = true ]]
	2197	then
	2198	printf " >>> batch-job will be created and submitted"
	2199	else
	2200	if [[ $local_compile = false ]]
	2201	then
	2202	printf " >>> MRUN will now continue to execute on this machine"
	2203	else
	2204	printf " >>> a test compilation will now be carried out on this machine"
	2205	fi
	2206	fi
	2207	fi
	2208
	2209
	2210
	2211
	2212	# FALLS AUF DIESER MASCHINE GERECHNET WERDEN SOLL, WERDEN JETZT ENTSPRE-
	2213	# CHENDE AKTIONEN DURCHGEFUEHRT
	2214	if [[ $do_batch = false ]]
	2215	then
	2216
	2217
	2218	# TEMPORAEREN KATALOG ERZEUGEN
	2219	mkdir -p $TEMPDIR
	2220	chmod go+rx $TEMPDIR
	2221	tmpcreate=true
	2222
	2223
	2224	# SAEMTLICHE QUELLTEXT-DATEIEN BZW. AUSFUEHRBARES PROGRAMM IN
	2225	# TEMPORAERES VERZEICHNIS KOPIEREN
	2226	if [[ $do_compile = true ]]
	2227	then
	2228
	2229	# ON NEC, COMPILATION IS DONE ON HOST CROSS VIA CROSS COMPILING
	2230	# CREATE A TEMPORARY DIRECTORY ON THAT MACHINE (HOME MOUNTED VIA NFS)
	2231	if [[ $localhost = nech ]]
	2232	then
	2233	TEMPDIR_COMPILE=$HOME/work/${usern}.$kennung
	2234	if mkdir -p $TEMPDIR_COMPILE
	2235	then
	2236	printf "\n *** \"$TEMPDIR_COMPILE\" "
	2237	printf "\n is generated as temporary directory for cross compiling\n"
	2238	else
	2239	printf "\n +++ creating directory \"$TEMPDIR_COMPILE\" "
	2240	printf "\n needed for cross compilation failed"
	2241	locat=compile
	2242	exit
	2243	fi
	2244	else
	2245	TEMPDIR_COMPILE=$TEMPDIR
	2246	fi
	2247
	2248
[82]	2249	# PFADNAMEN FUER DAS MAKE-DEPOSITORY ERMITTELN
	2250	line=""
	2251	grep "%depository_path" $config_file > tmp_mrun
	2252	while read line
	2253	do
	2254	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
	2255	then
	2256	if [[ "$(echo $line \| cut -d" " -s -f3)" = "" ]]
[1]	2257	then
[82]	2258	global_depository_path=`echo $line \| cut -d" " -s -f2`
[1]	2259	fi
[82]	2260	fi
	2261	done < tmp_mrun
[1]	2262
[82]	2263	line=""
	2264	grep " $localhost" $config_file \| grep "%depository_path" > tmp_mrun
	2265	while read line
	2266	do
	2267	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
[1]	2268	then
[211]	2269	if [[ "$(echo $line \| cut -d" " -s -f4)" = "$cond1" && "$(echo $line \| cut -d" " -s -f5)" = "$cond2" ]]
	2270	then
	2271	local_depository_path=`echo $line \| cut -d" " -s -f2`
	2272	fi
[1]	2273	fi
[82]	2274	done < tmp_mrun
[1]	2275
[82]	2276	if [[ "$local_depository_path" = "" ]]
	2277	then
	2278	if [[ "$global_depository_path" != "" ]]
[1]	2279	then
[82]	2280	local_depository_path=$global_depository_path
[1]	2281	else
[82]	2282	printf "\n\n +++ no depository path found in configuration file"
	2283	printf "\n for local host \"$localhost\" "
	2284	printf "\n please set \"\%depository_path\" in configuration file\n"
	2285	locat=config_file; exit
[1]	2286	fi
[82]	2287	fi
	2288	eval local_depository_path=$local_depository_path
[215]	2289	[[ "$cond1" != "" ]] && local_depository_path=${local_depository_path}_$cond1
	2290	[[ "$cond2" != "" ]] && local_depository_path=${local_depository_path}_$cond2
[1]	2291
[215]	2292
[82]	2293	basename=`print $mainprog \| cut -f1 -d"."`
	2294	eval make_depository=${local_depository_path}/${basename}_current_version.tar
	2295	if [[ ! -f $make_depository ]]
	2296	then
	2297	printf "\n"
	2298	printf "\n *** WARNING: make depository \"$make_depository\" not found"
	2299	printf "\n \"make\" will fail, if the Makefile or other source files are missing\n"
	2300	else
	2301	cp $make_depository $TEMPDIR_COMPILE
[1]	2302	cd $TEMPDIR_COMPILE
[82]	2303	tar -xf $make_depository > /dev/null 2>&1
[1]	2304	cd - > /dev/null
	2305	fi
[82]	2306
	2307	cp SOURCES_FOR_RUN_$fname/* $TEMPDIR_COMPILE
	2308
	2309	# FALLS USER-INTERFACE VORHANDEN UND AUF DATEI MIT ANDEREM NAMEN
	2310	# ALS user_interface.f90 LIEGT, DIESEN GEAENDERTEN NAMEN INS
	2311	# MAKEFILE EINTRAGEN
[211]	2312	# cd $TEMPDIR_COMPILE
	2313	# interface_file=`grep -l "END SUBROUTINE user_parin" $source_list`
	2314	# if [[ "$interface_file" != "" ]]
	2315	# then
	2316	# interface_file=`echo $interface_file \| cut -d"." -f1`
	2317	# mv Makefile Makefile_old
	2318	# sed "s/user_interface/$interface_file/g" Makefile_old > Makefile
	2319	# fi
	2320	# cd - > /dev/null
[1]	2321	else
	2322	cp $executable ${TEMPDIR}/a.out
	2323	fi
	2324
	2325
	2326	# WECHSEL IN TEMPORAEREN KATALOG
	2327	cd $TEMPDIR
	2328	printf "\n *** changed to temporary directory: $TEMPDIR"
	2329
	2330
	2331	# OUTPUT-DATEI-VERBINDUNGEN AUF TEMPORAERER DATEI ABLEGEN
	2332	# DIESE DATEI KANN VON SPAETER AUFZURUFENDEN BENUTZERPROZEDUREN GELESEN
	2333	# WERDEN, UM ZU LOKALEN DATEINAMEN GEHOERENDE PERMANENTE NAMEN ZU
	2334	# ERMITTELN
	2335	(( i = 0 ))
	2336	while (( i < iout ))
	2337	do
	2338	(( i = i + 1 ))
	2339	if [[ "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = tra \|\| "${actionout[$i]}" = trpe ]]
	2340	then
	2341	printf "${localout[$i]} ${actionout[$i]}\n${pathout[$i]}\n${localhost}_${fname}${endout[$i]}\n" >> OUTPUT_FILE_CONNECTIONS
	2342	else
	2343	printf "${localout[$i]} ${actionout[$i]}\n${pathout[$i]}\n${frelout[$i]}\n" >> OUTPUT_FILE_CONNECTIONS
	2344	fi
	2345	done
	2346
	2347
	2348	# EVTL. UEBERSETZUNGSAKTIONEN STARTEN
	2349	if [[ $do_compile = true ]]
	2350	then
	2351
	2352
	2353	# COMPILING WITH MAKE (ON NEC COMPILER IS CALLED ON HOST CROSS)
[82]	2354	printf "\n\n\n *** compilation starts \n$striche\n"
	2355	printf " *** compilation with make using following options:\n"
[211]	2356	printf " make depository: $make_depository"
[82]	2357	printf " compilername: $compiler_name\n"
	2358	printf " options: $fopts\n"
	2359	printf " preprocessor-directives: $cpp_options \n"
	2360	printf " linker-options: $lopts \n"
	2361	printf " source code files: $source_list \n"
	2362
	2363	if [[ $localhost = nech ]]
[1]	2364	then
[82]	2365	ssh 136.172.44.192 -l $usern ". /SX/opt/etc/initsx.sh; cd \$HOME/work/${usern}.$kennung; sxmake -f Makefile PROG=a.out F90=$compiler_name COPT=\"$cpp_options\" F90FLAGS=\"$fopts\" LDFLAGS=\"$lopts\" "
	2366	cp $TEMPDIR_COMPILE/a.out .
	2367	[[ $? != 0 ]] && compile_error=true
	2368	rm -rf $TEMPDIR_COMPILE
[197]	2369	elif [[ $localhost = lcsgib ]]
	2370	then
	2371	printf " compiler is called via ssh on \"bicegate\" \n"
	2372	ssh 130.73.232.102 -l $usern ". /usr/share/modules/init/bash; module load mpt; cd $TEMPDIR; make -f Makefile PROG=a.out F90=$compiler_name COPT=\"$cpp_options\" F90FLAGS=\"$fopts\" LDFLAGS=\"$lopts\" "
	2373	[[ ! -f a.out ]] && compile_error=true
	2374	continue # ANDERENFALLS IST STATUS=1, FALLS A.OUT VORHANDEN
	2375	elif [[ $localhost = lcsgih ]]
	2376	then
	2377	printf " compiler is called via ssh on \"hicegate\" \n"
[210]	2378	ssh 130.75.4.103 -l $usern ". /usr/share/modules/init/bash; module load mpt; cd $TEMPDIR; make -f Makefile PROG=a.out F90=$compiler_name COPT=\"$cpp_options\" F90FLAGS=\"$fopts\" LDFLAGS=\"$lopts\" 2>&1 "
[197]	2379	# ssh 130.75.4.102 -l $usern ". /usr/share/modules/init/bash; module load mvapich2; cd $TEMPDIR; make -f Makefile PROG=a.out F90=$compiler_name COPT=\"$cpp_options\" F90FLAGS=\"$fopts\" LDFLAGS=\"$lopts\" 2>&1 "
	2380	# print ". /usr/share/modules/init/bash; module load mpt; cd $TEMPDIR; make -f Makefile PROG=a.out F90=$compiler_name COPT=\"$cpp_options\" F90FLAGS=\"$fopts\" LDFLAGS=\"$lopts\" " \| ssh ${usern}@130.75.4.102 2>&1
	2381	[[ ! -f a.out ]] && compile_error=true
	2382	continue # ANDERENFALLS IST STATUS=1, FALLS A.OUT VORHANDEN
[1]	2383	else
[118]	2384	[[ $localhost = lctit ]] && export LM_LICENSE_FILE=27050@tggls
[82]	2385	make -f Makefile PROG=a.out F90=$compiler_name COPT="$cpp_options" F90FLAGS="$fopts" LDFLAGS="$lopts"
	2386	fi
[1]	2387
	2388	if [[ $? != 0 \|\| "$compile_error" = true \|\| "$module_compile_error" = true ]]
	2389	then
	2390	printf "\n +++ error occured while compiling or linking"
	2391	locat=compile
[181]	2392
[182]	2393	# WORKAROUND: REMOVE IF CONSTRUCT LATER, BUT KEEP THE EXIT!
[197]	2394	# if [[ $localhost != lcsgib && $localhost != lcsgih ]]
	2395	# then
[181]	2396	exit
[197]	2397	# else
	2398	# locat=normal
	2399	# fi
[1]	2400	else
	2401	printf "$striche\n *** compilation finished \n"
	2402	fi
	2403	fi
	2404
	2405
	2406	# FALLS NUR TESTWEISE KOMPILIERT WERDEN SOLLTE, IST MRUN JETZT FERTIG
	2407	if [[ $local_compile = true ]]
	2408	then
	2409	cd $HOME
	2410	rm -rf $TEMPDIR
	2411	locat=local_compile; exit
	2412	fi
	2413
	2414
	2415	# BEREITSTELLEN DER INPUT-DATEIEN
	2416	# SCHLEIFE UEBER ALLE VOM BENUTZER ANGEGEBENEN DATEIEN
	2417	(( i = 0 ))
	2418	while (( i < iin ))
	2419	do
	2420	(( i = i + 1 ))
	2421	if (( i == 1 ))
	2422	then
	2423	printf "\n\n *** providing INPUT-files:\n$striche"
	2424	fi
	2425
	2426
	2427	# OPTIONALE DATEIEN BEI NICHTVORHANDENSEIN UEBERGEHEN
	2428	if [[ "${transin[$i]}" = unavailable ]]
	2429	then
	2430	if [[ "${extin[$i]}" = "" \|\| "${extin[$i]}" = " " ]]
	2431	then
	2432	printf "\n +++ WARNING: input file \"${pathin[$i]}/${afname}${endin[$i]}\" "
	2433	printf "\n is not available!"
	2434	else
	2435	printf "\n +++ WARNING: input file \"${pathin[$i]}/${afname}${endin[$i]}.${extin[$i]}\" "
	2436	printf "\n is not available!"
	2437	fi
	2438	continue
	2439	fi
	2440
	2441	# PRUEFEN, OB EINZELDATEI ODER DATEI PRO PROZESSOR
	2442	files_for_pes=false; datentyp=file
	2443	if [[ "${actionin[$i]}" = pe && -n $numprocs ]]
	2444	then
	2445	files_for_pes=true; datentyp=directory
	2446	actionin[$i]=""
	2447	elif [[ "${actionin[$i]}" = pe && ! -n $numprocs ]]
	2448	then
	2449	actionin[$i]=""
	2450	elif [[ "${actionin[$i]}" = arpe && -n $numprocs ]]
	2451	then
	2452	files_for_pes=true; datentyp=directory
	2453	actionin[$i]="ar"
	2454	elif [[ "${actionin[$i]}" = arpe && ! -n $numprocs ]]
	2455	then
	2456	actionin[$i]="ar"
	2457	elif [[ "${actionin[$i]}" = flpe && -n $numprocs ]]
	2458	then
	2459	files_for_pes=true; datentyp=directory
	2460	actionin[$i]="fl"
	2461	elif [[ "${actionin[$i]}" = flpe && ! -n $numprocs ]]
	2462	then
	2463	actionin[$i]="fl"
	2464	fi
	2465
	2466	if [[ $files_for_pes = true ]]
	2467	then
	2468	printf "\n >>> INPUT: ${absnamein[$i]}/.... to ${localin[$i]}"
	2469	else
	2470	printf "\n >>> INPUT: ${absnamein[$i]} to ${localin[$i]}"
	2471	fi
	2472
	2473	# INPUT-DATEI FUER EINEN FORTSETZUNGSLAUF. ES WIRD GEPRUEFT,
	2474	# OB DIESE DATEI NOCH AUF DEM TEMPORAEREN DATENKATALOG VORHANDEN
	2475	# IST. FALLS NICHT, WIRD VERSUCHT, SIE ANSCHLIESSEND VOM ARCHIV-
	2476	# SERVER ZU HOLEN
	2477	if [[ "${actionin[$i]}" = fl ]]
	2478	then
	2479	printf "\n $datentyp will be fetched from temporary directory \"${tmp_data_catalog}\" !"
	2480	if [[ $files_for_pes = false ]]
	2481	then
	2482	if [[ -f "$tmp_data_catalog/${frelin[$i]}" ]]
	2483	then
	2484	ln $tmp_data_catalog/${frelin[$i]} ${localin[$i]}
	2485	got_tmp[$i]=true
	2486	elif [[ -f "$WORK/${frelin[$i]}" && $ignore_archive_error = true ]]
	2487	then
	2488	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" !"
	2489	printf "\n *** trying to use backup copy in \"$WORK\" "
	2490	cp $WORK/${frelin[$i]} ${localin[$i]}
	2491	else
	2492	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" "
	2493	printf "\n or \"$tmp_data_catalog\" does not exist!"
	2494	printf "\n *** trying to get copy from archive"
	2495	actionin[$i]=ar
	2496	fi
	2497	else
	2498	if [[ -d "$tmp_data_catalog/${frelin[$i]}" ]]
	2499	then
	2500	mkdir ${localin[$i]}
[149]	2501	cd $tmp_data_catalog/${frelin[$i]}
	2502	for file in $(ls *)
	2503	do
	2504	ln $file $TEMPDIR/${localin[$i]}
	2505	done
	2506	cd $TEMPDIR
[1]	2507	got_tmp[$i]=true
	2508	elif [[ -d "$WORK/${frelin[$i]}" && $ignore_archive_error = true ]]
	2509	then
	2510	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" !"
	2511	printf "\n *** trying to use backup copy in \"$WORK\" "
	2512	cp -r $WORK/${frelin[$i]} ${localin[$i]}
	2513	else
	2514	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" "
	2515	printf "\n or \"$tmp_data_catalog\" does not exist!"
	2516	printf "\n *** trying to get copy from archive"
	2517	actionin[$i]=ar
	2518	fi
	2519	fi
	2520	fi
	2521
	2522
	2523	# DATEI LIEGT AUF ARCHIV-SERVER
	2524	if [[ "${actionin[$i]}" = ar ]]
	2525	then
	2526
	2527	if [[ $files_for_pes = false ]]
	2528	then
	2529	printf "\n file will be restored from archive-system ($archive_system)!"
	2530	else
	2531	printf "\n directory will be restored from archive-system ($archive_system)!"
	2532	fi
	2533
	2534	file_restored=false
	2535
	2536	if [[ $archive_system = asterix ]]
	2537	then
	2538	do_stagein=true
	2539	(( stagein_anz = 0 ))
	2540	while [[ $do_stagein = true ]]
	2541	do
	2542	if [[ $files_for_pes = false ]]
	2543	then
	2544	stagein -O ${frelin[$i]} > STAGEIN_OUTPUT
	2545	else
	2546	stagein -t -O ${frelin[$i]} > STAGEIN_OUTPUT
	2547	fi
	2548	cat STAGEIN_OUTPUT
	2549	if [[ $(grep -c "st.msg:i24" STAGEIN_OUTPUT) != 0 ]]
	2550	then
	2551	file_restored=true
	2552	do_stagein=false
	2553	else
	2554	(( stagein_anz = stagein_anz + 1 ))
	2555	if (( stagein_anz == 10 ))
	2556	then
	2557	printf "\n +++ stagein stoped after 10 tries"
	2558	locat=stage
	2559	exit
	2560	fi
	2561	printf "\n +++ restoring from archive failed, trying again:"
	2562	sleep 900
	2563	fi
	2564	done
	2565	elif [[ $archive_system = DMF ]]
	2566	then
	2567	if [[ $files_for_pes = false ]]
	2568	then
	2569	printf "\n +++ restoring of single files impossible with $archive_system !\n"
	2570	locat=DMF
	2571	exit
	2572	else
	2573	find $ARCHIVE/${frelin[$i]} -type m -print \| dmget
	2574	cp -r $ARCHIVE/${frelin[$i]} $PWD
	2575	file_restored=true
	2576	fi
	2577	elif [[ $archive_system = tivoli ]]
	2578	then
	2579	if [[ $files_for_pes = false ]]
	2580	then
	2581	if [[ $localhost = ibmh ]]
	2582	then
	2583	ssh $usern@hdata.hlrn.de "cp $PERM/${frelin[$i]} $PWD"
	2584	else
	2585	ssh $usern@bdata.hlrn.de "cp $PERM/${frelin[$i]} $PWD"
	2586	fi
	2587	else
	2588	(( inode = 0 ))
	2589	while (( inode < nodes ))
	2590	do
	2591	if [[ $localhost = ibmh ]]
	2592	then
	2593	ssh $usern@hdata.hlrn.de "cd $PWD; tar xf $PERM/${frelin[$i]}/${frelin[$i]}.node_$inode.tar"
	2594	else
	2595	ssh $usern@bdata.hlrn.de "cd $PWD; tar xf $PERM/${frelin[$i]}/${frelin[$i]}.node_$inode.tar"
	2596	fi
	2597	(( inode = inode + 1 ))
	2598	done
	2599	fi
	2600	file_restored=true
	2601	elif [[ $archive_system = ut ]]
	2602	then
	2603	if [[ $files_for_pes = false ]]
	2604	then
	2605	cp $UT/${frelin[$i]} .
	2606	else
	2607	(( inode = 0 ))
	2608	while (( inode < nodes ))
	2609	do
	2610	tar xf $UT/${frelin[$i]}/${frelin[$i]}.node_$inode.tar
	2611	(( inode = inode + 1 ))
	2612	done
	2613	fi
	2614	file_restored=true
	2615	else
	2616	printf "\n +++ archive_system=\"$archive_system\" restore impossible!"
	2617	locat=rearchive
	2618	exit
	2619	fi
	2620
	2621	if [[ $file_restored = true ]]
	2622	then
	2623
	2624	# DATEI AUCH AUF TEMPORAERES DATENVERZEICHNIS LEGEN, DAMIT
	2625	# SIE BEI WEITEREN ZUGRIFFEN NOCH VORHANDEN IST
	2626	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog; chmod g+rx $tmp_data_catalog
	2627	if [[ $files_for_pes = false ]]
	2628	then
	2629	ln -f ${frelin[$i]} $tmp_data_catalog/${frelin[$i]}
	2630	else
	2631	mkdir $tmp_data_catalog/${frelin[$i]}
	2632	ln -f ${frelin[$i]}/* $tmp_data_catalog/${frelin[$i]}
	2633	fi
	2634	got_tmp[$i]=true
	2635
	2636	# DATEI UNTER LOKALEM NAMEN ZUR VERFUEGUNG STELLEN
	2637	mv ${frelin[$i]} ${localin[$i]}
	2638
	2639	fi
	2640	fi
	2641
	2642
	2643	# DATEI LIEGT IM VOM BENUTZER ANGEGEBENEN VERZEICHNIS
	2644	if [[ "${actionin[$i]}" = "" \|\| "${actionin[$i]}" = "di" \|\| "${actionin[$i]}" = "npe" ]]
	2645	then
	2646
	2647	if [[ "${actionin[$i]}" = "npe" && -n $numprocs ]]
	2648	then
	2649
	2650	# DATEI WIRD FUER DIE PROZESSOREN EINES PARALLERECHNERS BEREITGESTELLT
	2651	printf "\n file will be provided for $numprocs processors"
	2652	mkdir ${localin[$i]}
	2653	ival=$numprocs
	2654	(( ii = 0 ))
	2655	while (( ii <= ival-1 ))
	2656	do
	2657	if (( ii < 10 ))
	2658	then
	2659	cp ${absnamein[$i]} ${localin[$i]}/_000$ii
	2660	elif (( ii < 100 ))
	2661	then
	2662	cp ${absnamein[$i]} ${localin[$i]}/_00$ii
	2663	elif (( ii < 1000 ))
	2664	then
	2665	cp ${absnamein[$i]} ${localin[$i]}/_0$ii
	2666	else
	2667	cp ${absnamein[$i]} ${localin[$i]}/_$ii
	2668	fi
	2669	(( ii = ii + 1 ))
	2670	done
	2671
	2672	else
	2673
	2674	if [[ $files_for_pes = true ]]
	2675	then
	2676
	2677	# DIE DEN PROZESSOREN EINES PARALLELRECHNERS ZUGEHOERIGEN
	2678	# DATEIEN WERDEN BEREITGESTELLT, INDEM ZUERST DER GESAMTE
	2679	# KATALOGINHALT KOPIERT UND DANN DIE EINZELNEN DATEIEN
	2680	# PER MOVE UMBENANNT WERDEN
	2681	printf "\n providing $numprocs files for the respective processors"
	2682	mkdir ${localin[$i]}
[183]	2683	if [[ $link_local_input = true ]]
	2684	then
	2685	printf " using ln -f\n"
	2686	cd ${absnamein[$i]}
	2687	for file in $(ls *)
	2688	do
	2689	ln -f $file ${localin[$i]}
	2690	done
	2691	cd $TEMPDIR
	2692	fi
	2693	# If "ln -f" fails of if "$link_local_input = false" do a normal "cp -r"
	2694	if [[ ! -f "${localin[$i]}/_0000" ]]
	2695	then
	2696	if [[ $link_local_input = true ]]
	2697	then
	2698	printf " ln failed for .../_0000, using cp...\n"
	2699	fi
	2700	cp -r ${absnamein[$i]}/* ${localin[$i]}
	2701	fi
[1]	2702
	2703	else
	2704	# BEREITSTELLUNG AUF EINPROZESSORRECHNERN
[183]	2705	if [[ $link_local_input = true ]]
	2706	then
	2707	printf " using ln -f\n"
	2708	ln -f ${absnamein[$i]} ${localin[$i]}
	2709	fi
	2710	# If "ln -f" fails of if "$link_local_input = false" do a normal "cp"
	2711	if [[ ! -f "${localin[$i]}" ]]
	2712	then
	2713	if [[ $link_local_input = true ]]
	2714	then
	2715	printf " ln failed, using cp...\n"
	2716	fi
	2717	cp ${absnamein[$i]} ${localin[$i]}
	2718	fi
[1]	2719	fi
	2720	fi
	2721	fi
	2722
	2723	done
	2724	if (( i != 0 ))
	2725	then
	2726	printf "\n$striche\n *** all INPUT-files provided \n"
	2727	fi
	2728
	2729
	2730	# NAMELIST-DATEI MIT WERTEN VON ENVIRONMENT-VARIABLEN ERZEUGEN (ZU
	2731	# LESEN VON PALM)
	2732	cat > ENVPAR << %%END%%
	2733	&envpar run_identifier = '$fname', host = '$localhost',
	2734	write_binary = '$write_binary', tasks_per_node = $tasks_per_node,
[75]	2735	maximum_cpu_time_allowed = ${cpumax}.,
	2736	revision = '$global_revision' /
[1]	2737
	2738	%%END%%
	2739
	2740
	2741	# EVENTUELLE INPUT-KOMMANDOS ABARBEITEN
	2742	(( i = 0 ))
	2743	while (( i < iic ))
	2744	do
	2745	(( i = i + 1 ))
	2746	if (( i == 1 ))
	2747	then
	2748	printf "\n\n *** execution of INPUT-commands:\n$striche"
	2749	fi
	2750	printf "\n >>> ${in_command[$i]}"
	2751	eval ${in_command[$i]}
	2752	if (( i == iic ))
	2753	then
	2754	printf "\n$striche\n"
	2755	fi
	2756	done
	2757
	2758
	2759	# VERBLEIBENDE CPU-ZEIT BERECHNEN
	2760	cpurest=${cpumax}.
	2761
	2762
	2763	# PROGRAMMSTART
	2764	printf "\n\n *** execution starts in directory\n \"`pwd`\"\n$striche\n"
	2765	PATH=$PATH:$TEMPDIR
	2766
	2767	if [[ "$cond1" = debug \|\| "$cond2" = debug ]]
	2768	then
	2769	if [[ "$ENVIRONMENT" = BATCH ]]
	2770	then
[211]	2771	if [[ $(echo $localhost \| cut -c1-5) != lcsgi ]]
	2772	then
	2773	printf "\n +++ debug is allowed in interactive mode only"
	2774	locat=debug
	2775	exit
	2776	fi
[1]	2777	fi
[5]	2778	if [[ $localhost = decalpha ]]
[1]	2779	then
	2780	dxladebug a.out
	2781	elif [[ $localhost = ibmb \|\| $localhost = ibmh ]]
	2782	then
	2783
	2784	# SETUP THE IBM MPI ENVIRONMENT
	2785	export MP_SHARED_MEMORY=yes
	2786	export AIXTHREADS_SCOPE=S
	2787	export OMP_NUM_THREADS=$threads_per_task
	2788	export AUTHSTATE=files
	2789	export XLFRTEOPTS="nlwidth=132:err_recovery=no" # RECORD-LENGTH OF NAMELIST-OUTPUT
	2790
	2791	# FOLLOWING OPTIONS ARE MANDATORY FOR TOTALVIEW
	2792	export MP_ADAPTER_USE=shared
	2793	export MP_CPU_USE=multiple
	2794	export MP_TIMEOUT=1200
	2795
	2796	unset MP_TASK_AFFINITY
	2797
	2798	# SO FAR, TOTALVIEW NEEDS HOSTFILE MECHANISM FOR EXECUTION
	2799	#(( ii = 1 ))
	2800	#while (( ii <= $numprocs ))
	2801	#do
	2802	# echo $localhost_realname >> hostfile
	2803	# (( ii = ii + 1 ))
	2804	#done
	2805	#export MP_HOSTFILE=hostfile
	2806
	2807	if [[ "$LOADLBATCH" = yes ]]
	2808	then
	2809	totalview poe a.out $ROPTS
	2810	else
	2811	echo totalview poe -a a.out -procs $numprocs -rmpool 0 -nodes 1 $ROPTS
	2812	export TVDSVRLAUNCHCMD=ssh
	2813	totalview poe -a a.out -procs $numprocs -rmpool 0 -nodes 1 $ROPTS
	2814	fi
[211]	2815	elif [[ $(echo $localhost \| cut -c1-5) = lcsgi ]]
	2816	then
	2817	# CURRENTLY NO DEBUGGER ON LCSGI
	2818	if [[ $run_coupled_model = true ]]
	2819	then
	2820	printf "\n +++ no debug in coupled mode available on \"$localhost\" "
	2821	locat=debug
	2822	exit
	2823	fi
	2824	(( ii = $numprocs / $threads_per_task ))
	2825	export OMP_NUM_THREADS=$threads_per_task
	2826	echo "OMP_NUM_THREADS=$OMP_NUM_THREADS"
	2827	if [[ $threads_per_task != 1 ]]
	2828	then
	2829	printf "\n threads per task: $threads_per_task"
	2830	fi
	2831	printf "\n\n"
	2832	# ulimit -s 300000 # A too large stack size causes problems
	2833	# export MV2_NUM_PORTS=2
	2834	# export MV2_CPU_MAPPING=0:1:2:3
	2835	# mpiexec ./a.out $ROPTS
	2836	# export MPI_LAUNCH_TIMEOUT=360
	2837	echo "no_coupling" > runfile_atmos
	2838	mpiexec_mpt -np $ii ./a.out $ROPTS
[1]	2839	else
	2840	printf "\n +++ no debug available on \"$localhost\" "
	2841	printf "\n or not implemented in mrun so far"
	2842	locat=debug
	2843	exit
	2844	fi
	2845	else
	2846	if [[ -n $numprocs ]]
	2847	then
	2848
	2849	# RUNNING THE PROGRAM ON PARALLEL MACHINES
	2850	if [[ $(echo $host \| cut -c1-3) = ibm ]]
	2851	then
	2852	# SETUP THE IBM MPI ENVIRONMENT
	2853	export MP_SHARED_MEMORY=yes
	2854	export AIXTHREAD_SCOPE=S
	2855	export OMP_NUM_THREADS=$threads_per_task
	2856	export XLSMPOPTS="spins=0:yields=0:stack=20000000"
	2857	export AUTHSTATE=files
	2858	export XLFRTEOPTS="nlwidth=132:err_recovery=no" # RECORD-LENGTH OF NAMELIST-OUTPUT
	2859	# export MP_PRINTENV=yes
	2860
	2861	# TUNING-VARIABLEN ZUR VERBESSERUNG DER KOMMUNIKATION
	2862	# ZEIGEN ABER DERZEIT (SEP 04, FEDERATION) KAUM WIRKUNG
	2863	export MP_WAIT_MODE=poll
	2864	[[ $node_usage = not_shared ]] && export MP_SINGLE_THREAD=yes
	2865	# export MP_EAGER_LIMIT=65535
	2866
	2867	# # TESTWEISE FUER TURBOMPI (JAN 05)
	2868	# export MPJ_MTAB=128
	2869	# export MPJ_ALLTOALL=1
	2870	# export MPJ_ALLTOALLV=1
	2871
	2872	if [[ "$LOADLBATCH" = yes ]]
	2873	then
	2874	printf "\n--- Control: OMP_NUM_THREADS = \"$OMP_NUM_THREADS\" \n"
	2875	if [[ "$cond1" = hpmcount \|\| "$cond2" = hpmcount ]]
	2876	then
[102]	2877	/opt/optibm/HPM_2_4_1/bin/hpmcount a.out $ROPTS
[1]	2878	else
[102]	2879	poe ./a.out $ROPTS
[1]	2880	fi
	2881	else
	2882	if [[ $localhost = ibmb \|\| $localhost = ibmh \|\| $localhost = ibms ]]
	2883	then
[102]	2884	poe a.out -procs $numprocs -nodes 1 -rmpool 0 $ROPTS
[1]	2885	elif [[ $localhost = ibmy ]]
	2886	then
	2887	if [[ -f $hostfile ]]
	2888	then
	2889	cp $hostfile hostfile
	2890	else
	2891	(( ii = 1 ))
	2892	while (( ii <= $numprocs ))
	2893	do
	2894	echo $localhost_realname >> hostfile
	2895	(( ii = ii + 1 ))
	2896	done
	2897	fi
	2898	export MP_HOSTFILE=hostfile
[102]	2899	./a.out -procs $tasks_per_node $ROPTS
[1]	2900	else
	2901	if [[ "$host_file" = "" ]]
	2902	then
	2903	printf "\n +++ no hostfile given in configuration file"
	2904	locat=config_file
	2905	exit
	2906	else
	2907	eval host_file=$host_file
	2908	fi
	2909	export MP_HOSTFILE=$host_file
[102]	2910	poe a.out -procs $numprocs -tasks_per_node $numprocs $ROPTS
[1]	2911	fi
	2912	fi
	2913	elif [[ $host = nech \|\| $host = neck ]]
	2914	then
	2915	(( ii = nodes ))
	2916	if [[ $ii = 1 ]]
	2917	then
	2918	export F_ERRCNT=0 # acceptable number of errors before program is stopped
	2919	export MPIPROGINF=YES
[61]	2920	# export F_TRACE=YES\|FMT1\|FMT2 # output of ftrace informations to job protocol
[1]	2921	echo "*** execution on single node with mpirun"
[102]	2922	mpirun -np $numprocs ./a.out $ROPTS
[1]	2923	else
	2924	(( i = 0 ))
	2925	while (( i < ii ))
	2926	do
	2927	echo "-h $i -p $tasks_per_node -e ./mpi_exec_shell" >> multinode_config
	2928	(( i = i + 1 ))
	2929	done
	2930
	2931	echo "#!/bin/sh" > mpi_exec_shell
	2932	echo " " >> mpi_exec_shell
	2933	echo "set -u" >> mpi_exec_shell
	2934	echo "F_ERRCNT=0" >> mpi_exec_shell
	2935	echo "MPIPROGINV=YES" >> mpi_exec_shell
	2936	echo "OMP_NUM_THREADS=$threads_per_task" >> mpi_exec_shell
	2937	echo "cpurest=$cpurest" >> mpi_exec_shell
	2938	echo "fname=$fname" >> mpi_exec_shell
	2939	echo "localhost=$localhost" >> mpi_exec_shell
	2940	echo "return_addres=$return_addres" >> mpi_exec_shell
	2941	echo "return_username=$return_username" >> mpi_exec_shell
	2942	echo "tasks_per_node=$tasks_per_node" >> mpi_exec_shell
	2943	echo "write_binary=$write_binary" >> mpi_exec_shell
	2944	echo "use_seperate_pe_for_dvrp_output=$use_seperate_pe_for_dvrp_output" >> mpi_exec_shell
	2945	echo " " >> mpi_exec_shell
	2946	echo "export F_ERRCNT" >> mpi_exec_shell
	2947	echo "export MPIPROGINV" >> mpi_exec_shell
	2948	echo "export OMP_NUM_THREADS" >> mpi_exec_shell
	2949	echo "export cpurest" >> mpi_exec_shell
	2950	echo "export fname" >> mpi_exec_shell
	2951	echo "export localhost" >> mpi_exec_shell
	2952	echo "export return_addres" >> mpi_exec_shell
	2953	echo "export return_username" >> mpi_exec_shell
	2954	echo "export tasks_per_node" >> mpi_exec_shell
	2955	echo "export write_binary" >> mpi_exec_shell
	2956	echo "export use_seperate_pe_for_dvrp_output" >> mpi_exec_shell
	2957	echo " " >> mpi_exec_shell
[102]	2958	echo "exec ./a.out" >> mpi_exec_shell
[1]	2959
	2960	chmod u+x mpi_exec_shell
	2961	export MPIPROGINF=YES
	2962	mpirun -f multinode_config &
	2963	wait
	2964
	2965	fi
[82]	2966	elif [[ $(echo $host \| cut -c1-2) = lc && $host != lctit ]]
[1]	2967	then
	2968
	2969	# COPY HOSTFILE FROM SOURCE DIRECTORY OR CREATE IT, IF IT
	2970	# DOES NOT EXIST
[179]	2971	if [[ $host != lcsgih && $host != lcsgib ]]
[1]	2972	then
[179]	2973	if [[ -f $hostfile ]]
	2974	then
	2975	cp $hostfile hostfile
	2976	else
	2977	(( ii = 1 ))
	2978	while (( ii <= $numprocs / $threads_per_task ))
	2979	do
	2980	echo $localhost_realname >> hostfile
	2981	(( ii = ii + 1 ))
	2982	done
	2983	fi
	2984	eval zeile=\"`head -n $ii hostfile`\"
	2985	printf "\n *** running on: $zeile"
[1]	2986	fi
[179]	2987
[1]	2988	(( ii = $numprocs / $threads_per_task ))
	2989	export OMP_NUM_THREADS=$threads_per_task
[179]	2990	echo "OMP_NUM_THREADS=$OMP_NUM_THREADS"
[1]	2991	if [[ $threads_per_task != 1 ]]
	2992	then
	2993	printf "\n threads per task: $threads_per_task"
	2994	fi
[102]	2995	if [[ $run_coupled_model = false ]]
[1]	2996	then
[102]	2997	printf "\n\n"
[179]	2998	if [[ $host = lcsgih \|\| $host = lcsgib ]]
[164]	2999	then
[197]	3000	# ulimit -s 300000 # A too large stack size causes problems
[196]	3001	# export MV2_NUM_PORTS=2
[181]	3002	# export MV2_CPU_MAPPING=0:1:2:3
[197]	3003	# mpiexec ./a.out $ROPTS
[210]	3004	# export MPI_LAUNCH_TIMEOUT=360
[197]	3005	mpiexec_mpt -np $ii ./a.out $ROPTS
[179]	3006	elif [[ $host = lcxt4 ]]
	3007	then
[164]	3008	aprun -n $ii -N $tasks_per_node a.out $ROPTS
	3009	else
[172]	3010	echo "no_coupling" > runfile_atmos
	3011	mpiexec -machinefile hostfile -n $ii a.out < runfile_atmos $ROPTS
[164]	3012	fi
[1]	3013	else
[164]	3014
[206]	3015	# currently there is no full MPI-2 support on ICE and XT4
	3016	(( iia = $numprocs_atmos / $threads_per_task ))
	3017	(( iio = $numprocs_ocean / $threads_per_task ))
	3018	printf "\n coupled run ($iia atmosphere, $iio ocean)"
	3019	printf "\n using $coupled_mode coupling"
[102]	3020	printf "\n\n"
[164]	3021
[206]	3022	if [[ $coupled_mode = "mpi2" ]]
[164]	3023	then
[206]	3024	echo "atmosphere_to_ocean $iia $iio" > runfile_atmos
	3025	echo "ocean_to_atmosphere $iia $iio" > runfile_ocean
	3026	if [[ $host = lcsgih \|\| $host = lcsgib ]]
	3027	then
[197]	3028
[206]	3029	mpiexec_mpt -np $iia ./palm $ROPTS < runfile_atmos &
	3030	mpiexec_mpt -np $iio ./palm $ROPTS < runfile_ocean &
[197]	3031
[206]	3032	elif [[ $host = lcxt4 ]]
	3033	then
[197]	3034
[206]	3035	aprun -n $iia -N $tasks_per_node a.out < runfile_atmos $ROPTS &
	3036	aprun -n $iio -N $tasks_per_node a.out < runfile_ocean $ROPTS &
	3037
	3038	else
	3039	# WORKAROUND BECAUSE mpiexec WITH -env option IS NOT AVAILABLE ON SOME SYSTEMS
	3040	mpiexec -machinefile hostfile -n $iia a.out $ROPTS < runfile_atmos &
	3041	mpiexec -machinefile hostfile -n $iio a.out $ROPTS < runfile_ocean &
	3042	# mpiexec -machinefile hostfile -n $iia -env coupling_mode atmosphere_to_ocean a.out $ROPTS &
	3043	# mpiexec -machinefile hostfile -n $iio -env coupling_mode ocean_to_atmosphere a.out $ROPTS &
	3044	fi
	3045	wait
	3046
[164]	3047	else
	3048
[206]	3049	echo "coupled_run $iia $iio" > runfile_atmos
	3050	if [[ $host = lcsgih \|\| $host = lcsgib ]]
	3051	then
	3052
	3053	mpiexec_mpt -np $ii a.out $ROPTS < runfile_atmos
	3054
	3055	elif [[ $host = lcxt4 ]]
	3056	then
	3057
	3058	aprun -n $ii -N $tasks_per_node a.out < runfile_atmos $ROPTS
	3059
	3060	fi
	3061	wait
[164]	3062	fi
[102]	3063
	3064	# if [[ $scirocco = true ]]
	3065	# then
	3066	# mpiexec -machinefile hostfile -n $ii a.out $ROPTS
	3067	# else
	3068	# mpirun -machinefile hostfile -np $ii a.out $ROPTS
	3069	# fi
[206]	3070	fi
[1]	3071	elif [[ $host = decalpha ]]
	3072	then
[102]	3073	dmpirun -np $numprocs a.out $ROPTS
[1]	3074	elif [[ $host = lctit ]]
	3075	then
	3076	export runfile=runfile.$kennung
	3077
	3078	echo "cd $PWD" > $runfile
	3079	echo "export OMP_NUM_THREADS=$OMP_NUM_THREADS" >> $runfile
	3080	echo "export cpurest=$cpurest" >> $runfile
	3081	echo "export fname=$fname" >> $runfile
	3082	echo "export localhost=$localhost" >> $runfile
	3083	echo "export return_addres=$return_addres" >> $runfile
	3084	echo "export return_username=$return_username" >> $runfile
	3085	echo "export tasks_per_node=$tasks_per_node" >> $runfile
	3086	echo "export write_binary=$write_binary" >> $runfile
	3087	echo "export use_seperate_pe_for_dvrp_output=$use_seperate_pe_for_dvrp_output" >> $runfile
	3088	echo "./a.out" >> $runfile
	3089	chmod u+x $runfile
	3090
	3091	if [[ "$QUEUE" = interactive ]]
	3092	then
[102]	3093	mpirun -np $numprocs a.out $ROPTS
[1]	3094	else
[127]	3095	(( mem_tsubame = $memory / 1024.0 ))
	3096	echo "Memory for Tsubame for each process in GB:", $mem_tsubame
[118]	3097	# n1ge -fore -g 1S060156 -mpi $numprocs -mem 4 -N palm -q $queue a.out $ROPTS
[126]	3098	/n1ge/TITECH_GRID/tools/bin/n1ge -fore -g $group_number -mpi ${numprocs}:$tasks_per_node -mem $mem_tsubame -N palm -rt $minuten -q $queue a.out $ROPTS
[1]	3099	fi
	3100
	3101	rm $runfile
	3102	else
[102]	3103	mpprun -n $numprocs a.out $ROPTS
[1]	3104	fi
	3105	[[ $? != 0 ]] && execution_error=true
	3106
	3107
	3108	# PERFORMANCE-AUSWERTUNG MIT APPRENTICE
	3109	if [[ "$cond1" = apprentice \|\| "$cond2" = apprentice ]]
	3110	then
	3111	apprentice
	3112	fi
	3113	else
[102]	3114	a.out $ROPTS
[1]	3115	fi
	3116	fi
	3117	if [[ $? != 0 \|\| $execution_error = true ]]
	3118	then
	3119
	3120	# ABBRUCH BEI LAUFZEITFEHLER
[102]	3121	# [[ ! ( "$cond1" = debug \|\| "$cond2" = debug ) ]] && cat aout_output*
[1]	3122	printf "\n +++ runtime error occured"
	3123	locat=execution
	3124	exit
	3125	else
[102]	3126	# [[ ! ( "$cond1" = debug \|\| "$cond2" = debug ) ]] && cat aout_output*
[1]	3127	printf "\n$striche\n *** execution finished \n"
	3128	fi
	3129
	3130
	3131
	3132	# EVENTUELLE OUTPUT-KOMMANDOS ABARBEITEN
	3133	(( i = 0 ))
	3134	while (( i < ioc ))
	3135	do
	3136	(( i = i + 1 ))
	3137	if (( i == 1 ))
	3138	then
	3139	printf "\n\n *** execution of OUTPUT-commands:\n$striche"
	3140	fi
	3141	printf "\n >>> ${out_command[$i]}"
	3142	eval ${out_command[$i]}
	3143	if (( i == ioc ))
	3144	then
	3145	printf "\n$striche\n"
	3146	fi
	3147	done
	3148
	3149
	3150	# EVTL. INHALT DES AKTUELLEN VERZEICHNISSES AUSGEBEN
	3151	if [[ $do_trace = true ]]
	3152	then
	3153	printf "\n\n"
	3154	ls -al
	3155	fi
	3156
	3157
	3158
	3159	# OUTPUT-DATEIEN AN IHRE ZIELORTE KOPIEREN
	3160	(( i = 0 ))
	3161	while (( i < iout ))
	3162	do
	3163	(( i = i + 1 ))
	3164	if (( i == 1 ))
	3165	then
	3166	printf "\n\n *** saving OUTPUT-files:\n$striche"
	3167	fi
	3168
	3169	# PRUEFEN, OB EINZELDATEI ODER DATEI PRO PROZESSOR
	3170	files_for_pes=false; filetyp=file
	3171	if [[ "${actionout[$i]}" = pe && -n $numprocs ]]
	3172	then
	3173	files_for_pes=true; filetyp=directory
	3174	actionout[$i]=""
	3175	elif [[ "${actionout[$i]}" = pe && ! -n $numprocs ]]
	3176	then
	3177	actionout[$i]=""
	3178	elif [[ "${actionout[$i]}" = arpe && -n $numprocs ]]
	3179	then
	3180	files_for_pes=true; filetyp=directory
	3181	actionout[$i]="ar"
	3182	elif [[ "${actionout[$i]}" = arpe && ! -n $numprocs ]]
	3183	then
	3184	actionout[$i]="ar"
	3185	elif [[ "${actionout[$i]}" = flpe && -n $numprocs ]]
	3186	then
	3187	files_for_pes=true; filetyp=directory
	3188	actionout[$i]="fl"
	3189	elif [[ "${actionout[$i]}" = flpe && ! -n $numprocs ]]
	3190	then
	3191	actionout[$i]="fl"
	3192	elif [[ "${actionout[$i]}" = trpe && -n $numprocs ]]
	3193	then
	3194	files_for_pes=true; filetyp=directory
	3195	actionout[$i]="tr"
	3196	elif [[ "${actionout[$i]}" = trpe && ! -n $numprocs ]]
	3197	then
	3198	actionout[$i]="tr"
	3199	fi
	3200
	3201	if [[ ! -f ${localout[$i]} && $files_for_pes = false ]]
	3202	then
	3203	printf "\n +++ temporary OUTPUT-file ${localout[$i]} does not exist\n"
	3204	elif [[ ! -f ${localout[$i]}/_0000 && $files_for_pes = true ]]
	3205	then
	3206	printf "\n +++ temporary OUTPUT-file ${localout[$i]}/.... does not exist\n"
	3207	else
	3208
	3209
	3210	# KOPIEREN PER FTP/SCP (IMMER IM BINAERMODUS, -M: FALLS ZIELKATALOG
	3211	# NICHT VORHANDEN, WIRD VERSUCHT, IHN ANZULEGEN), ABER NUR BEI
	3212	# REMOTE-RECHNUNGEN
	3213	if [[ "${actionout[$i]}" = tr ]]
	3214	then
	3215	if [[ $localhost != $fromhost ]]
	3216	then
	3217	if [[ $files_for_pes = false ]]
	3218	then
	3219	cps=""
	3220	cst=""
	3221	else
	3222	cps=-c
	3223	cst="/"
	3224	fi
	3225	if [[ $localhost = ibmh \|\| $localhost = ibmb \|\| $localhost = nech ]]
	3226	then
	3227
	3228	# TRANSFER IN EIGENSTAENDIGEM JOB
	3229	# ZUERST KOPIE DER DATEI INS TEMPORAERE DATENVERZEICHNIS
	3230	[[ ! -d $tmp_data_catalog/TRANSFER ]] && mkdir -p $tmp_data_catalog/TRANSFER
	3231	file_to_transfer=${fname}_${localout[$i]}_to_transfer_$kennung
	3232	if [[ $files_for_pes = false ]]
	3233	then
	3234	ln -f ${localout[$i]} $tmp_data_catalog/TRANSFER/$file_to_transfer
	3235	else
	3236	mkdir $tmp_data_catalog/TRANSFER/$file_to_transfer
	3237	ln ${localout[$i]}/* $tmp_data_catalog/TRANSFER/$file_to_transfer
	3238	fi
	3239
	3240	echo "set -x" > transfer_${localout[$i]}
	3241	echo "cd $tmp_data_catalog/TRANSFER" >> transfer_${localout[$i]}
[82]	3242
	3243	printf "\n >>> OUTPUT: ${localout[$i]}$cst by SCP in seperate job to"
	3244	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}$cst"
	3245	printf "\n or higher cycle\n"
	3246	echo "batch_scp $cps -b -m -u $return_username $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
	3247
[1]	3248	echo "[[ \$? = 0 ]] && rm $file_to_transfer" >> transfer_${localout[$i]}
	3249
	3250	if [[ $localhost = nech ]]
	3251	then
[82]	3252	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 900 transfer_${localout[$i]}
[1]	3253	else
	3254	if [[ "$LOGNAME" = b323013 ]]
	3255	then
[164]	3256	subjob -v -q c1 -X 0 -m 1000 -t 900 -c $job_catalog transfer_${localout[$i]}
[1]	3257	else
[164]	3258	subjob -d -v -q c1 -X 0 -m 1000 -t 900 -c $job_catalog transfer_${localout[$i]}
[1]	3259	fi
	3260	fi
	3261
	3262	else
	3263
	3264	# TRANSFER INNERHALB DIESES JOBS
	3265	transfer_failed=false
[82]	3266	printf "\n >>> OUTPUT: ${localout[$i]}$cst by SCP to"
	3267	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}$cst\n"
	3268	batch_scp $cps -b -m -u $return_username $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
	3269	[[ $? != 0 ]] && transfer_failed=true
[1]	3270
	3271	# BEI FEHLGESCHLAGENEM TRANSFER SICHERUNGSKOPIE AUF
	3272	# LOKALER MASCHINE ANLEGEN
	3273	if [[ $transfer_failed = true ]]
	3274	then
	3275	printf " +++ transfer failed. Trying to save a copy on the local host under:\n"
	3276	printf " ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung\n"
	3277
	3278	# ERSTMAL PRUEFEN, OB VERZEICHNIS EXISTIERT. GEGEBENENFALLS
	3279	# ANLEGEN.
	3280	eval local_catalog=${pathout[$i]}
	3281	if [[ ! -d $local_catalog ]]
	3282	then
	3283	printf " *** local directory does not exist. Trying to create:\n"
	3284	printf " $local_catalog \n"
	3285	mkdir -p $local_catalog
	3286	fi
	3287	eval cp ${localout[$i]} ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung
	3288	transfer_problems=true
	3289	fi
	3290	fi
	3291	else
	3292
	3293	# WERTZUWEISUNG, SO DASS WEITER UNTEN NUR KOPIERT WIRD
	3294	actionout[$i]=""
	3295	fi
	3296	fi
	3297
	3298
	3299	# APPEND PER FTP/SCP (IMMER IM BINAERMODUS, -M: FALLS ZIELKATALOG
	3300	# NICHT VORHANDEN, WIRD VERSUCHT, IHN ANZULEGEN), ABER NUR BEI
	3301	# REMOTE-RECHNUNGEN
	3302	if [[ "${actionout[$i]}" = tra ]]
	3303	then
	3304	if [[ $localhost != $fromhost ]]
	3305	then
	3306	if [[ $localhost = ibmh \|\| $localhost = ibmb \|\| $localhost = nech ]]
	3307	then
	3308
	3309	# TRANSFER IN EIGENSTAENDIGEM JOB
	3310	# ZUERST KOPIE DER DATEI INS TEMPORAERE DATENVERZEICHNIS
	3311	[[ ! -d $tmp_data_catalog/TRANSFER ]] && mkdir -p $tmp_data_catalog/TRANSFER
	3312	file_to_transfer=${fname}_${localout[$i]}_to_transfer_$kennung
	3313	ln -f ${localout[$i]} $tmp_data_catalog/TRANSFER/$file_to_transfer
	3314
	3315	echo "set -x" > transfer_${localout[$i]}
	3316	echo "cd $tmp_data_catalog/TRANSFER" >> transfer_${localout[$i]}
[82]	3317
	3318	printf "\n >>> OUTPUT: ${localout[$i]} append by SCP in seperate job to"
	3319	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}"
	3320	printf "\n or higher cycle\n"
	3321	echo "batch_scp -A -b -m -u $return_username $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
	3322
[1]	3323	echo "[[ \$? = 0 ]] && rm $file_to_transfer" >> transfer_${localout[$i]}
	3324
	3325	if [[ $localhost = nech ]]
	3326	then
[82]	3327	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 900 transfer_${localout[$i]}
[1]	3328	else
	3329	if [[ $LOGNAME = b323013 ]]
	3330	then
[164]	3331	subjob -v -q c1 -X 0 -m 1000 -t 900 -c $job_catalog transfer_${localout[$i]}
[1]	3332	else
[164]	3333	subjob -d -v -q c1 -X 0 -m 1000 -t 900 -c $job_catalog transfer_${localout[$i]}
[1]	3334	fi
	3335	fi
	3336
	3337	else
	3338
	3339	# TRANSFER INNERHALB DIESES JOBS
	3340	transfer_failed=false
[82]	3341	printf "\n >>> OUTPUT: ${localout[$i]} append by SCP to"
	3342	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}\n"
	3343	batch_scp -A -b -m -u $return_username $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
	3344	[[ $? != 0 ]] && transfer_failed=true
[1]	3345
	3346	# BEI FEHLGESCHLAGENEM TRANSFER SICHERUNGSKOPIE AUF
	3347	# LOKALER MASCHINE ANLEGEN
	3348	if [[ $transfer_failed = true ]]
	3349	then
	3350	printf " +++ transfer failed. Trying to save a copy on the local host under:\n"
	3351	printf " ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung\n"
	3352
	3353	# ERSTMAL PRUEFEN, OB VERZEICHNIS EXISTIERT. GEGEBENENFALLS
	3354	# ANLEGEN
	3355	eval local_catalog=${pathout[$i]}
	3356	if [[ ! -d $local_catalog ]]
	3357	then
	3358	printf " *** local directory does not exist. Trying to create:\n"
	3359	printf " $local_catalog \n"
	3360	mkdir -p $local_catalog
	3361	fi
	3362
	3363	eval cp ${localout[$i]} ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung
	3364	transfer_problems=true
	3365	fi
	3366	fi
	3367	else
	3368
	3369	# WERTZUWEISUNG, SO DASS WEITER UNTEN NUR APPEND AUF
	3370	# LOKALER MASCHINE DURCHGEFUEHRT WIRD
	3371	actionout[$i]=a
	3372	fi
	3373	fi
	3374
	3375
	3376	# OUTPUT-DATEI FUER EINEN FORTSETZUNGSLAUF. DATEI WIRD PER
	3377	# LINK AUF DEN TEMPORAEREN DATENKATALOG GELEGT. OPTION -f WIRD
	3378	# VERWENDET, FALLS DORT NOCH EINE DATEI GLEICHEN NAMENS VORHANDEN
	3379	# SEIN SOLLTE. ANSCHLIESSEND WIRD SEINE ARCHIVIERUNG ANGESTOSSEN
	3380	if [[ "${actionout[$i]}" = fl ]]
	3381	then
	3382	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
	3383	chmod g+rx $tmp_data_catalog
	3384	if [[ $files_for_pes = false ]]
	3385	then
	3386	printf "\n >>> OUTPUT: ${localout[$i]} to"
	3387	printf "\n $tmp_data_catalog/${frelout[$i]} (temporary data catalog)\n"
	3388	ln -f ${localout[$i]} $tmp_data_catalog/${frelout[$i]}
	3389	else
	3390	printf "\n >>> OUTPUT: ${localout[$i]}/.... to"
	3391	printf "\n $tmp_data_catalog/${frelout[$i]} (temporary data catalog)\n"
	3392	mkdir $tmp_data_catalog/${frelout[$i]}
[149]	3393	cd ${localout[$i]}
	3394	for file in $(ls *)
	3395	do
	3396	ln -f $file $tmp_data_catalog/${frelout[$i]}
	3397	done
	3398	cd $TEMPDIR
[1]	3399	fi
	3400
	3401
	3402	# ARCHIVIERUNGSJOB WIRD ERZEUGT UND ABGESCHICKT
	3403	if [[ $store_on_archive_system = true ]]
	3404	then
	3405
	3406	if [[ $archive_system = asterix ]]
	3407	then
	3408	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
	3409	if [[ $files_for_pes = false ]]
	3410	then
	3411	echo "stageout ${frelout[$i]} > STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
	3412	else
	3413	echo "stageout -t ${frelout[$i]} > STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
	3414	fi
	3415	echo "cat STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
	3416	echo "if [[ \$(grep -c \"st.msg:150\" STAGE_OUTPUT${i}_$kennung) != 0 ]]" >> archive_${frelout[$i]}
	3417	echo "then" >> archive_${frelout[$i]}
	3418	echo " do_stageout=false" >> archive_${frelout[$i]}
	3419	echo "else" >> archive_${frelout[$i]}
	3420	echo " echo \" +++ $filetyp ${frelout[$i]} could not be stored on archive-system\" " >> archive_${frelout[$i]}
	3421	echo " cat /dev/null > ~/job_queue/ARCHIVE_ERROR_$fname" >> archive_${frelout[$i]}
	3422	echo " cat STAGE_OUTPUT${i}_$kennung > ~/job_queue/archive_${frelout[$i]}_error" >> archive_${frelout[$i]}
	3423	echo " echo \" *** $filetyp ${frelout[$i]} will be copied to \$WORK as backup\" " >> archive_${frelout[$i]}
	3424	if [[ $files_for_pes = false ]]
	3425	then
	3426	echo " cp ${frelout[$i]} \$WORK" >> archive_${frelout[$i]}
	3427	else
	3428	echo " cp -r ${frelout[$i]} \$WORK/${frelout[$i]}" >> archive_${frelout[$i]}
	3429	fi
	3430	echo " echo \" *** $filetyp ${frelout[$i]} saved\" " >> archive_${frelout[$i]}
	3431	echo "fi" >> archive_${frelout[$i]}
	3432	echo "rm STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
	3433	elif [[ $archive_system = DMF ]]
	3434	then
	3435	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
	3436	if [[ $files_for_pes = false ]]
	3437	then
	3438	printf "\n +++ archiving of single files impossible with $archive_system !\n"
	3439	locat=DMF
	3440	exit
	3441	else
	3442	# FUER RECHNER IN JUELICH. DORT KOENNTEN AUCH
	3443	# EINZELNE DATEIEN GESICHERT WERDEN (SPAETER KORR.)
	3444	echo "rm -rf \$ARCHIVE/${frelout[$i]}" >> archive_${frelout[$i]}
	3445	echo "cp -r ${frelout[$i]} \$ARCHIVE" >> archive_${frelout[$i]}
	3446	fi
	3447	elif [[ $archive_system = tivoli ]]
	3448	then
	3449	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
	3450	if [[ $files_for_pes = false ]]
	3451	then
	3452	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
	3453	echo "set -x" >> archive_${frelout[$i]}
	3454	echo "rm -rf \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
	3455	echo "cp ${frelout[$i]} \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
	3456	else
	3457
	3458	echo "set -x" >> archive_${frelout[$i]}
	3459	echo "rm -rf \$PERM/${frelout[$i]}/*" >> archive_${frelout[$i]}
	3460	echo "[[ ! -d \$PERM/${frelout[$i]} ]] && mkdir $PERM/${frelout[$i]}" >> archive_${frelout[$i]}
	3461	cd $tmp_data_catalog
	3462	all_files=`ls -1 ${frelout[$i]}/*`
	3463	cd - > /dev/null
	3464	(( inode = 0 ))
	3465	(( tp1 = tasks_per_node + 1 ))
	3466	while (( inode < nodes ))
	3467	do
	3468	# echo "*** all_files = \"$all_files\" "
	3469	files=`echo $all_files \| cut -d" " -f1-$tasks_per_node`
	3470	all_files=`echo $all_files \| cut -d" " -f$tp1-`
	3471	# echo "*** tasks_per_node = \"$tasks_per_node\" "
	3472	# echo "*** files = \"$files\" "
	3473	# echo "*** all_files = \"$all_files\" "
	3474	echo "tar cvf \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar $files" >> archive_${frelout[$i]}
	3475	echo "dsmc incremental \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar" >> archive_${frelout[$i]}
	3476	echo "dsmmigrate \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar" >> archive_${frelout[$i]}
	3477	(( inode = inode + 1 ))
	3478	done
	3479	# echo "rm -rf \$PERM/${frelout[$i]}.tar" >> archive_${frelout[$i]}
	3480	# echo "tar cvf \$PERM/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
	3481	fi
	3482	elif [[ $archive_system = ut ]]
	3483	then
	3484	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
	3485	if [[ $files_for_pes = false ]]
	3486	then
	3487	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
	3488	echo "set -x" >> archive_${frelout[$i]}
	3489	echo "rm -rf \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
	3490	echo "cp ${frelout[$i]} \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
	3491	else
	3492
	3493	echo "set -x" >> archive_${frelout[$i]}
	3494	echo "rm -rf \$UT/${frelout[$i]}/*" >> archive_${frelout[$i]}
	3495	echo "[[ ! -d \$UT/${frelout[$i]} ]] && mkdir $UT/${frelout[$i]}" >> archive_${frelout[$i]}
	3496	cd $tmp_data_catalog
	3497	all_files=`ls -1 ${frelout[$i]}/*`
	3498	cd - > /dev/null
	3499	(( inode = 0 ))
	3500	(( tp1 = tasks_per_node + 1 ))
	3501	while (( inode < nodes ))
	3502	do
	3503	files=`echo $all_files \| cut -d" " -f1-$tasks_per_node`
	3504	all_files=`echo $all_files \| cut -d" " -f$tp1-`
	3505	echo "tar cvf \$UT/${frelout[$i]}/${frelout[$i]}.node_$inode.tar $files" >> archive_${frelout[$i]}
	3506	(( inode = inode + 1 ))
	3507	done
	3508	fi
	3509	elif [[ $archive_system = none ]]
	3510	then
	3511	printf " +++ archiving on $localhost not available!\n"
	3512	fi
	3513
	3514	if [[ $archive_system != none ]]
	3515	then
	3516	if [[ $localhost = ibmh \|\| $localhost = ibmb ]]
	3517	then
[164]	3518	# subjob -d -v -q cdata -X 0 -m 1000 -t 43200 -c $job_catalog archive_${frelout[$i]}
	3519	subjob -v -q cdata -X 0 -m 1000 -t 43200 -c $job_catalog archive_${frelout[$i]}
[1]	3520	elif [[ $localhost = nech ]]
	3521	then
[82]	3522	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 7200 archive_${frelout[$i]}
[1]	3523	fi
	3524	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
	3525	fi
	3526	else
	3527	printf " +++ caution: option -A is switched on. No archiving on $archive_system!\n"
	3528	fi
	3529
	3530
	3531	# LEERDATEI IM BENUTZERVERZEICHNIS ANLEGEN, DAMIT BEKANNT IST,
	3532	# WIE DIE HOECHSTE ZYKLUSNUMMER AUF DEM ARCHIV-SYSTEM LAUTET
	3533	if [[ $files_for_pes = false ]]
	3534	then
	3535	cat /dev/null > ${pathout[$i]}
	3536	else
	3537	mkdir -p ${pathout[$i]}
	3538	fi
	3539
	3540	fi
	3541
	3542
	3543	# KOPIEREN AUF LOKALER MASCHINE ZUM ARCHIV-SYSTEM
	3544	# AUSSERDEM MUSS LEERDATEI ANGELEGT WERDEN, DAMIT BEKANNT IST,
	3545	# WIE DIE HOECHSTE ZYKLUSNUMMER AUF DEM ARCHIV-SYSTEM LAUTET
	3546	# FALLS IRGENDEINE (VON MEHREREN) ARCHIVIERUNGEN SCHIEF GEHT,
	3547	# WIRD FLAG GESETZT UND BLEIBT AUCH BEI WEITEREN ORDNUNGS-
	3548	# GEMAESSEN ARCHIVIERUNGEN GESETZT
	3549	if [[ "${actionout[$i]}" = ar ]]
	3550	then
	3551	if [[ $files_for_pes = false ]]
	3552	then
	3553	printf "\n >>> OUTPUT: ${localout[$i]} to"
	3554	printf "\n ${pathout[$i]}"
	3555	printf "\n File will be copied to archive-system ($archive_system) !\n"
	3556	else
	3557	printf "\n >>> OUTPUT: ${localout[$i]}/_.... to"
	3558	printf "\n ${pathout[$i]}"
	3559	printf "\n Directory will be copied to archive-system ($archive_system) !\n"
	3560	fi
	3561	mv ${localout[$i]} ${frelout[$i]}
	3562
	3563	file_saved=false
	3564
	3565	if [[ $archive_system = asterix ]]
	3566	then
	3567	do_stageout=true
	3568	(( stageout_anz = 0 ))
	3569	while [[ $do_stageout = true ]]
	3570	do
	3571	if [[ $files_for_pes = false ]]
	3572	then
	3573	stageout ${frelout[$i]} > STAGE_OUTPUT
	3574	else
	3575	stageout -t ${frelout[$i]} > STAGE_OUTPUT
	3576	fi
	3577	cat STAGE_OUTPUT
	3578	if [[ $(grep -c "st.msg:150" STAGE_OUTPUT) != 0 ]]
	3579	then
	3580	file_saved=true
	3581	do_stageout=false
	3582	else
	3583	if [[ $files_for_pes = false ]]
	3584	then
	3585	printf "\n +++ file ${frelout[$i]} could not be saved on archive-system"
	3586	else
	3587	printf "\n +++ directory ${frelout[$i]} could not be saved on archive-system"
	3588	fi
	3589	(( stageout_anz = stageout_anz + 1 ))
	3590	if (( stageout_anz == 10 ))
	3591	then
	3592	printf "\n +++ stoped after 10 unsuccessful tries!"
	3593	archive_save=false
	3594	do_stageout=false
	3595	else
	3596	printf "\n *** new try to store on archive after 15 min:"
	3597	sleep 900
	3598	fi
	3599	fi
	3600	done
	3601	elif [[ $archive_system = DMF ]]
	3602	then
	3603	if [[ $files_for_pes = false ]]
	3604	then
	3605	printf "\n +++ archiving of single files impossible on $archive_system!\n"
	3606	locat=DMF
	3607	exit
	3608	else
	3609	rm -rf $ARCHIVE/${frelout[$i]}
	3610	cp -r ${frelout[$i]} $ARCHIVE
	3611	fi
	3612	file_saved=true
	3613	elif [[ $archive_system = tivoli ]]
	3614	then
	3615	# ARCHIVIERUNG NUR PER BATCH-JOB MOEGLICH
	3616	# DATEI MUSS ZWISCHENZEITLICH INS TEMPORAERE DATENVERZEICHNIS
	3617	# GELEGT WERDEN
	3618	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
	3619	chmod g+rx $tmp_data_catalog
	3620	if [[ $files_for_pes = false ]]
	3621	then
	3622	ln -f ${frelout[$i]} $tmp_data_catalog/${frelout[$i]}
	3623	else
	3624	mkdir $tmp_data_catalog/${frelout[$i]}
	3625	ln -f ${frelout[$i]}/* $tmp_data_catalog/${frelout[$i]}
	3626	fi
	3627
	3628	# BATCH JOB GENERIEREN UND ABSCHICKEN; DATEI MUSS WIEDER
	3629	# AUS TEMPORAEREM DATENVERZEICHNIS ENTFERNT WERDEN
	3630	echo "cd $tmp_data_catalog" > archive_${frelout[$i]}
	3631	if [[ $files_for_pes = false ]]
	3632	then
	3633	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
	3634	echo "rm -rf \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
	3635	echo "cp ${frelout[$i]} \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
	3636	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
	3637	else
	3638	echo "rm -rf \$PERM/${frelout[$i]}.tar" >> archive_${frelout[$i]}
	3639	echo "tar cvf \$PERM/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
	3640	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
	3641	fi
	3642
[164]	3643	subjob -v -d -q cdata -X 0 -m 1000 -t 43200 -c $job_catalog archive_${frelout[$i]}
[1]	3644	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
	3645	file_saved=true
	3646
	3647	elif [[ $archive_system = ut ]]
	3648	then
	3649	# ARCHIVIERUNG NUR PER BATCH-JOB MOEGLICH
	3650	# DATEI MUSS ZWISCHENZEITLICH INS TEMPORAERE DATENVERZEICHNIS
	3651	# GELEGT WERDEN
	3652	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
	3653	chmod g+rx $tmp_data_catalog
	3654	if [[ $files_for_pes = false ]]
	3655	then
	3656	ln -f ${frelout[$i]} $tmp_data_catalog/${frelout[$i]}
	3657	else
	3658	mkdir $tmp_data_catalog/${frelout[$i]}
	3659	ln -f ${frelout[$i]}/* $tmp_data_catalog/${frelout[$i]}
	3660	fi
	3661
	3662	# BATCH JOB GENERIEREN UND ABSCHICKEN; DATEI MUSS WIEDER
	3663	# AUS TEMPORAEREM DATENVERZEICHNIS ENTFERNT WERDEN
	3664	echo "cd $tmp_data_catalog" > archive_${frelout[$i]}
	3665	if [[ $files_for_pes = false ]]
	3666	then
	3667	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
	3668	echo "rm -rf \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
	3669	echo "cp ${frelout[$i]} \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
	3670	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
	3671	else
	3672	echo "rm -rf \$UT/${frelout[$i]}.tar" >> archive_${frelout[$i]}
	3673	echo "tar cvf \$UT/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
	3674	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
	3675	fi
	3676
[82]	3677	subjob -v -c /pf/b/$usern/job_queue -d -q pp -X 0 -m 1000 -t 7200 archive_${frelout[$i]}
[1]	3678	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
	3679	file_saved=true
	3680
	3681	else
	3682	printf "\n +++ archive_system=\"$archive_system\" archiving impossible!"
	3683	archive_save=false
	3684	fi
	3685	if [[ $file_saved = true ]]
	3686	then
	3687	if [[ $files_for_pes = false ]]
	3688	then
	3689	cat /dev/null > ${pathout[$i]}
	3690	else
	3691	mkdir -p ${pathout[$i]}
	3692	fi
	3693	fi
	3694	fi
	3695
	3696	# APPEND AUF LOKALER MASCHINE
	3697	if [[ "${actionout[$i]}" = "a" ]]
	3698	then
	3699	printf "\n >>> OUTPUT: ${localout[$i]} append to ${pathout[$i]}\n"
	3700	cat ${localout[$i]} >> ${pathout[$i]}
	3701	fi
	3702
	3703	# KOPIEREN AUF LOKALER MASCHINE
	3704	# ES MUSS KOPIERT WERDEN, DA MOVE NICHT UEBER FILESYSTEM HINAUS MOEGLICH
	3705	if [[ "${actionout[$i]}" = "" && $files_for_pes = false ]]
	3706	then
	3707
	3708	# KOPIEREN AUF EINPROZESSORMASCHINE
[5]	3709	if [[ "${extout[$i]}" != " " && "${extout[$i]}" != "" ]]
[1]	3710	then
	3711	printf "\n >>> OUTPUT: ${localout[$i]} to ${pathout[$i]}.${extout[$i]}\n"
[149]	3712	if [[ $link_local_output = true ]]
	3713	then
	3714	printf " using ln -f\n"
	3715	ln -f ${localout[$i]} ${pathout[$i]}.${extout[$i]}
	3716	fi
	3717	# If "ln -f" fails of if "$link_local_output = false" do a normal "cp"
	3718	if [[ ! -f "${pathout[$i]}.${extout[$i]}" ]]
	3719	then
	3720	if [[ $link_local_output = true ]]
	3721	then
	3722	printf " ln failed, using cp...\n"
	3723	fi
	3724	cp ${localout[$i]} ${pathout[$i]}.${extout[$i]}
	3725	fi
[1]	3726	else
	3727	printf "\n >>> OUTPUT: ${localout[$i]} to ${pathout[$i]}\n"
[149]	3728	if [[ $link_local_output = true ]]
	3729	then
	3730	printf " using ln -f\n"
	3731	ln -f ${localout[$i]} ${pathout[$i]}
	3732	fi
	3733	# If "ln -f" fails of if "$link_local_output = false" do a normal "cp"
	3734	if [[ ! -f "${pathout[$i]}" ]]
	3735	then
	3736	if [[ $link_local_output = true ]]
	3737	then
	3738	printf " ln failed, using cp...\n"
	3739	fi
	3740	cp ${localout[$i]} ${pathout[$i]}
	3741	fi
[1]	3742	fi
	3743
	3744	elif [[ "${actionout[$i]}" = "" && $files_for_pes = true ]]
	3745	then
	3746
	3747	# DIE DEN PROZESSOREN EINES PARALLELRECHNERS ZUGEHOERIGEN
	3748	# DATEIEN WERDEN ERST IN EINEM KATALOG GESAMMELT UND DIESER
	3749	# WIRD DANN KOPIERT
	3750	# PER MOVE UMBENANNT WERDEN
	3751	printf "\n >>> OUTPUT: ${localout[$i]}/_.... to ${pathout[$i]}\n"
[149]	3752	if [[ $link_local_output = true ]]
	3753	then
	3754	printf " using ln -f\n"
	3755	mkdir ${pathout[$i]}
	3756	cd ${localout[$i]}
	3757	for file in $(ls *)
	3758	do
	3759	ln -f $file ${pathout[$i]}
	3760	done
	3761	cd $TEMPDIR
	3762	fi
	3763	# If "ln -f" fails of if "$link_local_output = false" do a normal "cp -r"
	3764	if [[ ! -f "${pathout[$i]}/_0000" ]]
	3765	then
	3766	if [[ $link_local_output = true ]]
	3767	then
	3768	printf " ln failed for .../_0000, using cp...\n"
	3769	fi
	3770	cp -r ${localout[$i]} ${pathout[$i]}
	3771	fi
[1]	3772
	3773	fi
	3774	fi
	3775	done
	3776	if (( i != 0 ))
	3777	then
	3778	if [[ $transfer_problems = true ]]
	3779	then
	3780	printf "\n$striche\n *** OUTPUT-files saved"
	3781	printf "\n +++ WARNING: some data transfers failed! \n"
	3782	else
	3783	printf "\n$striche\n *** all OUTPUT-files saved \n"
	3784	fi
	3785	fi
	3786
	3787
	3788	# EVENTUELL FOLGEJOB STARTEN
	3789	# DATEI CONTINUE_RUN MUSS VOM BENUTZERPROGRAMM AUS ERZEUGT WERDEN
	3790	if [[ -f CONTINUE_RUN ]]
	3791	then
	3792
	3793	if [[ $archive_save = true ]]
	3794	then
	3795
	3796	# ZUERST IN MRUN-AUFRUF OPTIONEN FUER FORTSETZUNGSLAUF, FUER
	3797	# STILLES ABARBEITEN (OHNE INTERAKTIVE RUECKFAGEN) UND FUER
	3798	# BATCH-BETRIEB (NUR WICHTIG, FALLS BATCH AUF LOKALER MASCHINE
	3799	# DURCHGEFUEHRT WERDEN SOLL) EINFUEGEN, FALLS NICHT BEREITS VOR-
	3800	# HANDEN
	3801	[[ $(echo $mc \| grep -c "\-C") = 0 ]] && mc="$mc -C"
	3802	[[ $(echo $mc \| grep -c "\-v") = 0 ]] && mc="$mc -v"
	3803	[[ $(echo $mc \| grep -c "\-b") = 0 ]] && mc="$mc -b"
	3804	if [[ $(echo $mc \| grep -c "#") != 0 ]]
	3805	then
	3806	mc=`echo $mc \| sed 's/#/f/g'`
	3807	fi
	3808
	3809
	3810	# JOB STARTEN
	3811	printf "\n\n *** initiating restart-run on \"$return_addres\" using command:\n"
	3812	echo " $mc"
	3813	printf "\n$striche\n"
	3814	if [[ $localhost != $fromhost ]]
	3815	then
	3816
[204]	3817	if [[ $localhost = lcsgih \|\| $localhost = lcsgib \|\| $localhost = nech \|\| $localhost = ibmb \|\| $localhost = ibmh \|\| $localhost = ibms \|\| $localhost = lctit ]]
[1]	3818	then
	3819	echo "*** ssh will be used to initiate restart-runs!"
	3820	echo " return_addres=\"$return_addres\" "
	3821	echo " return_username=\"$return_username\" "
	3822	if [[ $return_addres = 172.20.25.41 ]]
	3823	then
	3824	# WORKAROUND AUF SCIROCCO AM TIT
[33]	3825	print "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc " \| ssh $return_addres -l $return_username
[1]	3826	else
[33]	3827	ssh $return_addres -l $return_username "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc "
[1]	3828	fi
	3829	else
	3830	printf "\n +++ no restart mechanism available for host \"$localhost\" "
	3831	locat=restart; exit
	3832	fi
	3833
	3834	# WARTEN, DAMIT SICH RESTART JOB IN QUEUE EINREIHEN KANN, BEVOR
	3835	# DER AKTUELLE JOB ENDET
	3836	sleep 30
	3837
	3838	else
	3839
	3840	# BEI RECHNUNGEN AUF LOKALER MASCHINE KANN MRUN DIREKT AUFGE-
[108]	3841	# RUFEN WERDEN, AUSSER AUF lcfimm
[1]	3842	cd $LOCAL_PWD
[108]	3843	if [[ $localhost = lcfimm ]]
	3844	then
	3845	ssh $return_addres -l $return_username "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc "
	3846	else
	3847	eval $mc # ' MUESSEN AUSGEWERTET WERDEN
	3848	fi
[1]	3849	cd - > /dev/null
	3850	fi
	3851	printf "\n$striche\n *** restart-run initiated \n"
	3852
	3853
	3854	# EVENTUELL INPUT-DATEIEN, DIE VON TEMPORAEREM DATENVERZEICHNIS
	3855	# GEHOLT WORDEN SIND, LOESCHEN
	3856	(( i = 0 ))
	3857	while (( i < iin ))
	3858	do
	3859	(( i = i + 1 ))
	3860	if [[ "${got_tmp[$i]}" = true && $keep_data_from_previous_run = false ]]
	3861	then
	3862	rm -r $tmp_data_catalog/${frelin[$i]}
	3863	fi
	3864	done
	3865
	3866	else
	3867
	3868	printf "\n +++ no restart-run possible, since errors occured"
	3869	printf "\n during the archive process"
	3870	fi
	3871
	3872	fi
	3873
	3874
	3875
	3876	# EVTL. EMAIL-BENACHRICHTIGUNG UEBER ABGESCHLOSSENEN LAUF
	3877	if [[ "$email_notification" != "" ]]
	3878	then
	3879
	3880	if [[ $localhost != $fromhost ]]
	3881	then
	3882	if [[ -f CONTINUE_RUN ]]
	3883	then
	3884	echo "PALM restart run necessary" > email_text
	3885	echo "description header of actual run:" >> email_text
	3886	cat CONTINUE_RUN >> email_text
	3887	echo "mrun-command to restart:" >> email_text
	3888	echo "$mc" >> email_text
	3889	else
	3890	echo "PALM run with base filename \"$fname\" on host \"$localhost\" finished" > email_text
	3891	fi
	3892	mail $email_notification < email_text
	3893	printf "\n *** email notification sent to \"$email_notification\" "
	3894	fi
	3895	fi
	3896
	3897
	3898
	3899	# ALLE ARBEITEN BEENDET. TEMPORAERER KATALOG KANN GELOESCHT WERDEN
	3900	cd $HOME
	3901	[[ $delete_temporary_catalog = true ]] && rm -rf $TEMPDIR
	3902
	3903	else
	3904
	3905
	3906	# FALLS AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL, WERDEN JETZT ENTSPRE-
	3907	# CHENDE AKTIONEN DURCHGEFUEHRT
	3908
	3909	# MRUN-BEFEHL FUER REMOTE-MASCHINE ZUSAMMENSTELLEN
[82]	3910	mrun_com="$mrun_script_name -a $afname -c $config_file -d $fname -h $host -H $fromhost -m $memory -t $cpumax -q $queue -R $return_addres -U $return_username -u $remote_username"
[1]	3911	[[ "$cpp_opts" != "" ]] && mrun_com=${mrun_com}" -D \"$cpp_opts\""
[79]	3912	[[ "$global_revision" != "" ]] && mrun_com=${mrun_com}" -G \"$global_revision\""
[123]	3913	[[ $group_number != none ]] && mrun_com=${mrun_com}" -g $group_number"
[1]	3914	[[ $do_compile = true ]] && mrun_com=${mrun_com}" -s \"$source_list\""
	3915	[[ "$input_list" != "" ]] && mrun_com=${mrun_com}" -i \"$input_list\""
	3916	[[ $ignore_archive_error = true ]] && mrun_com=${mrun_com}" -I"
	3917	[[ $keep_data_from_previous_run = true ]] && mrun_com=${mrun_com}" -k"
	3918	[[ "$additional_conditions" != "" ]] && mrun_com=${mrun_com}" -K \"$additional_conditions\""
	3919	# [[ "$makefile" != "$source_path/Makefile" ]] && mrun_com=${mrun_com}" -M \"$makefile\""
	3920	[[ "$output_list" != "" ]] && mrun_com=${mrun_com}" -o \"$output_list\""
	3921	[[ "$read_from_config" = false ]] && mrun_com=${mrun_com}" -S"
	3922	[[ $do_trace = true ]] && mrun_com=${mrun_com}" -x"
	3923	[[ "$numprocs" != "" ]] && mrun_com=${mrun_com}" -X $numprocs"
	3924	if [[ $use_openmp = true ]]
	3925	then
	3926	mrun_com=${mrun_com}" -O"
	3927	[[ "$tasks_per_node" != "" ]] && mrun_com=${mrun_com}" -T $threads_per_task"
	3928	else
	3929	[[ "$tasks_per_node" != "" ]] && mrun_com=${mrun_com}" -T $tasks_per_node"
	3930	fi
	3931	[[ $store_on_archive_system = false ]] && mrun_com=${mrun_com}" -A"
	3932	[[ $package_list != "" ]] && mrun_com=${mrun_com}" -p \"$package_list\""
	3933	[[ $return_password != "" ]] && mrun_com=${mrun_com}" -P $return_password"
	3934	[[ $delete_temporary_catalog = false ]] && mrun_com=${mrun_com}" -B"
[127]	3935	[[ $node_usage != default && "$(echo $node_usage \| cut -c1-3)" != "sla" && $node_usage != novice ]] && mrun_com=${mrun_com}" -n $node_usage"
[206]	3936	[[ $run_coupled_model = true ]] && mrun_com=${mrun_com}" -Y \"$coupled_dist\""
[1]	3937	if [[ $do_remote = true ]]
	3938	then
	3939	printf "\n>>>> MRUN-command on execution host:\n>>>> $mrun_com \n"
	3940	fi
	3941
	3942
	3943	# ZUSAMMENSTELLUNG DES JOBSCRIPTS AUF DATEI jobfile
	3944	jobfile=jobfile.$RANDOM
	3945
	3946
	3947	# TEMPORAERES VERZEICHNIS GENERIEREN UND NACH DORT WECHSELN
	3948	echo "mkdir $TEMPDIR" >> $jobfile
	3949	echo "cd $TEMPDIR" >> $jobfile
	3950
	3951
	3952	# EVENTUELL FEHLERVERFOLGUNG AKTIVIEREN
	3953	if [[ $do_trace = true ]]
	3954	then
	3955	echo "set -x" >> $jobfile
	3956	else
	3957	echo "set +vx" >> $jobfile
	3958	fi
	3959
	3960
[191]	3961	# BEREITSTELLUNG VON QUELLTEXTEN, MRUN-SCRIPTS UND KONFIGURATIONS-
	3962	# DATEI FUER DEN JOB
	3963	if [[ $( echo $host \| cut -c1-5 ) = lcsgi ]]
[1]	3964	then
	3965
[191]	3966	# KONFIGURATIONSDATEI UND MRUN_SCRIPT IN DAS SOURCE-VERZEICHNIS
	3967	# KOPIEREN
	3968	if [[ $restart_run != true ]]
	3969	then
	3970	cp $config_file $working_directory/SOURCES_FOR_RUN_$fname
	3971	cp ${PALM_BIN}/$mrun_script_name $working_directory/SOURCES_FOR_RUN_$fname
	3972	fi
[1]	3973
[191]	3974	# SOURCE-VERZEICHNIS VOM LOKALEN RECHNER PER SCP TRANSFERIEREN
[193]	3975	echo "set -x" >> $jobfile
	3976	echo "scp -r $return_username@$return_addres:$working_directory/SOURCES_FOR_RUN_$fname ." >> $jobfile
	3977	echo "export SOURCES_COMPLETE=true" >> $jobfile
[1]	3978
[193]	3979	# QUELLTEXTE, MRUN-SCRIPT UND KONFIGURATIONSDATEI IN DAS AKTUELLE
	3980	# ARBEITSVERZEICHNIS VERSCHIEBEN
	3981	echo "mv SOURCES_FOR_RUN_$fname/$config_file . " >> $jobfile
	3982	echo "mv SOURCES_FOR_RUN_$fname/$mrun_script_name . " >> $jobfile
	3983	echo "execute_mrun=true" >> $jobfile
	3984	echo " " >> $jobfile
	3985
[191]	3986	else
	3987
	3988	# ABSPEICHERN DER QUELLTEXTE (NUR FALLS UEBERSETZT WERDEN SOLL)
	3989	# SOWIE GEGEBENENFALLS DES MAKEFILES
	3990	if [[ $do_compile = true ]]
	3991	then
	3992
	3993	source_catalog=SOURCES_FOR_RUN_$fname
	3994
	3995	# UNTERVERZEICHNIS FUER QUELLTEXTE UND MAKEFILE ANLEGEN
	3996	# MRUN WIRD DIESES VRZEICHNIS UEBER ENVIRONMENT VARIABLE
	3997	# MITGETEILT (UEBERSTEUERT ANGABE IN KONFIGURATIONSDATEI)
	3998	echo "mkdir SOURCES_FOR_RUN_$fname" >> $jobfile
	3999	echo "export SOURCES_COMPLETE=true" >> $jobfile
	4000	echo "cd SOURCES_FOR_RUN_$fname" >> $jobfile
	4001
	4002	for filename in $source_list
	4003	do
	4004	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
	4005	echo "cat > $filename << \"%END%\"" >> $jobfile
	4006	cat $source_catalog/$filename >> $jobfile
	4007	echo " " >> $jobfile
	4008	echo "%END%" >> $jobfile
	4009	echo " " >> $jobfile
	4010	done
	4011
[1]	4012	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
[191]	4013	echo "cat > Makefile << \"%END%\"" >> $jobfile
	4014	cat $source_catalog/Makefile >> $jobfile
[1]	4015	echo " " >> $jobfile
	4016	echo "%END%" >> $jobfile
	4017	echo " " >> $jobfile
	4018
[191]	4019	echo "cd - > /dev/null" >> $jobfile
[1]	4020
[191]	4021	fi
[1]	4022
	4023
[191]	4024	# ABSPEICHERN DER KONFIGURATIONSDATEI
	4025	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
	4026	echo "cat > $config_file << \"%END%\"" >> $jobfile
	4027	cat $config_file >> $jobfile
	4028	echo "%END%" >> $jobfile
	4029	echo " " >> $jobfile
[1]	4030
	4031
[191]	4032	# ABSPEICHERN DER AKTUELLEN MRUN-VERSION
	4033	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
	4034	echo "cat > $mrun_script_name <<\"%END%\"" >> $jobfile
	4035	cat ${PALM_BIN}/$mrun_script_name >> $jobfile
	4036	echo "%END%" >> $jobfile
	4037	if [[ $host = lctit ]]
	4038	then
	4039	echo "sed 's/bin\/ksh/home2\/usr5\/mkanda\/pub\/ksh/' < $mrun_script_name > mrun_new" >> $jobfile
	4040	echo "mv mrun_new $mrun_script_name" >> $jobfile
	4041	fi
	4042	echo "chmod u+x $mrun_script_name" >> $jobfile
	4043	echo "execute_mrun=true" >> $jobfile
	4044	echo " " >> $jobfile
[1]	4045
	4046	fi
	4047
[191]	4048
[1]	4049	# EVTL. BENOETIGTE INPUT-DATEIEN PER FTP HOLEN ODER DEM JOB DIREKT
	4050	# MITGEBEN UND AUF DEM REMOTE-RECHNER IM BENUTZERVERZEICHNIS ABLEGEN
	4051	# FALLS DIESES NICHT EXISTIERT, WIRD VERSUCHT, DAS JEWEILS LETZTE
	4052	# UNTERVERZEICHNIS DES PFADNAMENS ANZULEGEN
	4053	if [[ $do_remote = true ]]
	4054	then
	4055	(( i = 0 ))
	4056	while (( i < iin ))
	4057	do
	4058	(( i = i + 1 ))
	4059	echo "[[ ! -d ${pathin[$i]} ]] && mkdir -p ${pathin[$i]}" >> $jobfile
	4060	if [[ "${transin[$i]}" = job ]]
	4061	then
	4062	echo "cat > ${remotepathin[$i]} <<\"%END%\"" >> $jobfile
	4063	eval cat ${pathin[$i]}/${frelin[$i]} >> $jobfile
	4064	echo " " >> $jobfile
	4065	echo "%END%" >> $jobfile
	4066	else
[82]	4067	echo "batch_scp -b -o -g -s -u $return_username $return_addres ${remotepathin[$i]} \"${pathin[$i]}\" ${frelin[$i]}" >> $jobfile
[1]	4068	fi
	4069
	4070	# UEBERPRUEFEN, OB DATEI ANGELEGT WERDEN KONNTE
	4071	echo "if [[ \$? = 1 ]]" >> $jobfile
	4072	echo "then" >> $jobfile
	4073	echo " echo \" \" " >> $jobfile
	4074	echo " echo \"+++ file ${remotepathin[$i]} could not be created\" " >> $jobfile
	4075	echo " echo \" please check, if directory exists on $host!\" " >> $jobfile
	4076	echo " echo \"+++ MRUN will not be continued\" " >> $jobfile
	4077	echo " execute_mrun=false" >> $jobfile
	4078	echo "fi" >> $jobfile
	4079	done
	4080	fi
	4081
	4082	# ARBEITSKATALOG AUF DER LOKALEN MASCHINE FUER EVENTUELLE
	4083	# FORTSETZUNGSLAUEFE PER ENV-VARIABLE UEBERGEBEN
	4084	echo "LOCAL_PWD=$working_directory" >> $jobfile
	4085	echo "export LOCAL_PWD" >> $jobfile
	4086
	4087	# EBENSO LOKALEN MRUN-KATALOG UEBERGEBEN
[22]	4088	echo "LOCAL_MRUN_PATH=$PALM_BIN" >> $jobfile
[1]	4089	echo "export LOCAL_MRUN_PATH" >> $jobfile
	4090
[66]	4091	# WORKAROUND FUER RIAM-NEC-JOBS WEGEN PROFILE-SCHWIERIGKEITEN
[69]	4092	if [[ $localhost_realname = "gate" \|\| $localhost = lctit ]]
[66]	4093	then
	4094	echo "export PALM_BIN=$PALM_BIN" >> $jobfile
	4095	fi
[1]	4096
	4097	# MRUN AUF ZIELRECHNER AUFRUFEN
	4098	echo "set -x" >> $jobfile
	4099	echo "[[ \$execute_mrun = true ]] && ./$mrun_com" >> $jobfile
	4100
	4101	echo 'ls -al; echo `pwd`' >> $jobfile
	4102	echo "cd \$HOME" >> $jobfile
	4103	echo "rm -rf $TEMPDIR" >> $jobfile
	4104
	4105
	4106
	4107
	4108	# JOB PER SUBJOB STARTEN
	4109	if [[ $silent = false ]]
	4110	then
	4111	printf "\n "
	4112	else
	4113	printf "\n\n"
	4114	fi
	4115
[164]	4116	subjob $job_on_file -h $host -u $remote_username -g $group_number -q $queue -m $memory -N $node_usage -t $cpumax $XOPT $TOPT $OOPT -n $fname -v -c $job_catalog $jobfile
[1]	4117	rm -rf $jobfile
	4118
	4119
	4120	fi # ENDE REMOTE-TEIL
	4121
	4122
	4123
	4124	# ENDE DER PROZEDUR

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