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source: palm/trunk/SCRIPTS/mrun @ 211

Last change on this file since 211 was 211, checked in by raasch, 16 years ago
user interface was split into one single file per subroutine
Property svn:keywords set to `Id Rev`
File size: 154.9 KB

Line
1	#!/bin/ksh
2	# mrun - Plot-Shellskript
3	# $Id: mrun 211 2008-11-11 04:46:24Z raasch $
4
5	# Prozedur zum Starten von Modellaeufen
6
7	# letzte Aenderung:
8	# 03/03/94 - Siggi - Entwicklungsbeginn
9	# 21/03/94 - Siggi - Entwicklungsabschluss (Version 1.0)
10	# 09/12/94 - Siggi - allexport unterbunden; statt dessen werden jetzt ein-
11	# zelne Variable exportiert. Dies ist noetig, weil an-
12	# sonsten irgendein Speicher ueberlaeuft und von mrun
13	# aufgerufene Programme (z.B. stageout) mit Fehlern
14	# abbrechen (too many arguments)
15	# 20/06/95 - Siggi - noclobber muss explizit abgeschaltet, da jetzt
16	# defaultmaessig im RRZN-Profile eingeschaltet
17	# 10/06/97 - Siggi - Zusaetzliche Option -C bei cpp, damit // nicht
18	# wegfallen
19	# 25/04/00 - Siggi - Version 1.5
20	# remote_addres und remote_user in return_addres bzw.
21	# return_username umbenannt, return_username wird dem
22	# mrun-Aufruf im Job ueber Option -U mitgegeben.
23	# Neue Variable remote_username, die beim interaktiven
24	# mrun-Aufruf zwingend ueber die neue Option -u oder
25	# in der Konfigurationsdatei angegeben werden muss.
26	# 08/02/01 - Siggi - Alle mrun-Meldungen ins englische uebersetzt,
27	# Version 1.7
28	# 05/05/02 - Siggi - Uebersetzungen mittels make-Mechanismus moeglich
29	# 21/11/02 - Siggi - ENV-Variable XLFRTEOPTS wird vor Ausfuehrung auf
30	# IBM gesetzt, um Record-Laenge der NAMELIST-Dateien,
31	# zu bestimmen; Praeprozessoroptionen haben nun alle
32	# die Form -Dtext=text, weil auf IBM sonst text durch
33	# die leere Zeichenkette ersetzt wird
34	# 01/08/03 - Siggi - Test of implementing dvrp+1PE on ibm
35	# 07/01/04 - Siggi - additional preprocessor directive for ibm included
36	# (-D$OMP=OMP) in order to avoid problems with
37	# OMP_NUM_THREADS
38	# 04/01/05 - Siggi - archiving on hanni and berni is done in separate
39	# tar files, one for each node used
40	# 07/01/04 - Siggi - old code for t3e, vpp and hpcs eliminated
41	# 09/01/05 - Siggi - workaround for getting the IP address on gfdl3
42	# 17/01/05 - Siggi - job for data transfer to local machine now within
43	# job class c1 (HLRN)
44	# 27/01/05 - Siggi - IP address workaround for gfdl3 removed
45	# 28/01/05 - Siggi - tar-filenames on $PERM (HLRN) now include the
46	# base filename and cycle number
47	# 16/02/05 - Gerald - hababai validated
48	# 14/03/05 - Siggi - abort on NEC after first runtime error (F_ERRCNT)
49	# 29/03/05 - Marcus - berni*-en0 validated
50	# 21/04/05 - Siggi - transfer-job-protocol for avs-data is no more stored
51	# 24/04/05 - Siggi - netcdf support on lcmuk
52	# 25/04/05 - Siggi - netcdf support on gfld3 (decalpha)
53	# 11/05/05 - Siggi - files with non-numeric extensions (.xxx after cycle
54	# number) can now be used within interactive runs
55	# 12/05/05 - Siggi - netcdf support on ibm
56	# 13/05/05 - Siggi - error in tar-filenames on $PERM (HLRN) removed
57	# 18/05/05 - Siggi - netcdf support on nec
58	# 24/05/05 - Siggi - netcdf support on ibms
59	# 14/06/05 - Siggi - sleep interval after submit of restart job increased
60	# to 30 seconds
61	# 28/06/05 - Siggi - bora adjusted to new intel compiler (LD_LIBRARY_
62	# PATH is temporarily set)
63	# 07/09/05 - Siggi - setting of MP_EAGER_LIMIT switched off because it
64	# caused warnings in the job protocol
65	# 20/10/05 - Siggi - update of netcdf-version on decalpha (gfdl3)
66	# 25/10/05 - Siggi - error in listing files for getting the cycle number
67	# removed
68	# 26/10/05 - Siggi - new paths for dvrp-library, transfer of catalogs
69	# realized by file attribute trpe
70	# 28/10/05 - Siggi - if existing, the file extension is output in case
71	# of missing input file - no job abort in case of
72	# missing input files with file extensions
73	# (preliminary solution)
74	# 31/10/05 - Siggi - data transfer from nech now within seperate job
75	# 04/11/05 - Siggi - netcdf 3.6.0-p1 on ibmh/ibmb
76	# 07/12/05 - Siggi - gallego and elephanta admitted
77	# 30/12/05 - Siggi - gfdl5 (ibmy) admitted
78	# 10/01/06 - Siggi - cpp directive for NetCDF 64bit support
79	# 20/01/06 - Siggi - cpp directive for ibmy
80	# 09/02/06 - Siggi - ibmy admitted for batch mode
81	# 13/04/06 - Siggi - ostria admitted
82	# 18/04/06 - Siggi - usage of OpenMP implemented (additional option -O)
83	# 10/05/06 - Siggi - environment variable XLSMPOPTS set on IBM for
84	# optimization of OpenMP runs (option stacksize is
85	# necessary for large gridpoint numbers because
86	# otherwise a segmentation fault occurs)
87	# 23/05/05 - Siggi - lctit (SUN Fire X4600) admitted
88	# 21/08/06 - Siggi - standard mrun path on scirocco is as on bora
89	# 23/08/06 - Siggi - netcdf support for scirocco (notebook)
90	# 20/09/06 - Marcus - add DVRP library on nech
91	# 24/10/06 - Siggi - Environment variables for PALM steering are written
92	# on local NAMELIST file ENVPAR
93	# 24/11/06 - Siggi - levanto admitted, maestro switched to ifc 9.1
94	# 28/11/06 - Siggi - call to interpret_config.x_levanto because of SuSe 10
95	# 06/02/07 - Siggi - add DVRP library on lcmuk
96	# 07/02/07 - Siggi - revision of source code handling, source code is
97	# now expected in directory given by source_path and
98	# not in the current working directory, source code
99	# files provided in add_source_path are allways
100	# compiled, source code to be compiled is allways
101	# sampled in SOURCES_FOR_RUN_$fname which is a
102	# subdirectory of the current working directory,
103	# -s TEST changed to -s WRITE_PERMIT or -s WP,
104	# adapted for RIAM (neck)
105	# bugfix for cycle number of output file (extout)
106	# all hpmuk-related code removed
107	# 14/02/07 - Siggi - dvrp support for neck added
108	# 28/02/07 - Siggi - empty lines in configuration file are accepted
109	# mrun_path replaced by PALM_BIN,
110	# all machines are calling interpret_config.x
111	# 14/03/07 - Siggi - fimm admitted, revision number added to terminal
112	# output
113	# 16/03/07 - Siggi - adjustments for lctit
114	# 29/03/07 - Siggi - global revision transfered to batch job by new
115	# option -G
116	# 30/03/07 - Siggi - compilation "by hand" removed, cpp-directives/options
117	# + netcdf/dvrp-options are read from configuration
118	# file, host identifier (local_host) is read from
119	# config file, code related to ftp filetransfer
120	# removed (incl. option -f)
121	# 19/06/07 - Siggi - time limit for cdata jobs increased
122	# 25/07/07 - Siggi - two sets of executables can be started on lcmuk,
123	# if new option -Y (coupling) is given,
124	# output of executables to aout_output removed,
125	# messages are immediately written to stdout instead
126	# 03/08/07 - Marcus - add XOPT="-X $numprocs" for lcfimm
127	# 09/08/07 - Marcus - workaround on lcfimm to propagate environment
128	# variables out to the nodes in coupled mode -disabled-
129	# 13/08/07 - Marcus - start local restart jobs per ssh on lcfimm
130	# 28/08/07 - Marcus - completely remove workaround on lcfimm to propagate
131	# environment variables out to the nodes in coupled mode
132	# 15/10/07 - Siggi - Preliminary adjustments for lctit, based on Jin's
133	# suggestions
134	# 19/10/07 - Marcus - further adjustments for lctit: add new optional
135	# argument -g group_number, admit all sla* node_usage
136	# queues
137	# 30/10/07 - Marcus - further adjustments for queues on lctit
138	# 14/02/08 - Bjoern - link of restart files with long file name possible
139	# 28/02/08 - Marcus - If environment variable link_local_output is set to
140	# true, mrun tries "ln -f" on local output and resorts
141	# to "cp" or "cp -r" on error
142	# 15/04/08 - Siggi - argument -c introduced to most of the subjob calls,
143	# which allows the user to choose his own job catalog
144	# by setting job_catalog in the configuration file
145	# (default is ~/job_queue),
146	# workaround for mpiexec with -env option,
147	# adjustments for lcxt4 (Bergen Center for Computational
148	# Science)
149	# 22/05/08 - Marcus - If environment variable link_local_input is set to
150	# true, mrun tries "ln -f" on local input and resorts
151	# to "cp" or "cp -r" on error
152	# 27/05/08 - Siggi - PATH is set to PALM_BIN everywhere (missing so far)
153	# 14/07/08 - Siggi - adjustments for lcsgih
154	# 08/08/08 - Marcus - typo removed in lcxt4 branch
155	# 17/09/08 - Siggi - restart mechanism adjusted for lcsgi
156	# 02/10/08 - BjornM - argument "-Y" modified, adjustments for coupled runs
157	# 21/10/08 - Siggi - bugfix for the case that -K has more than one
158	# argument
159	# 08/11/08 - Siggi - bugfix for depository path settings in configuration
160	# file
161	# 11/11/08 - Siggi - rules for using user code files changed: user
162	# code splitted into one file per subroutine,
163	# user can provide his/her own makefile, only
164	# default source-code filenames are allowed
165
166
167
168	# VARIABLENVEREINBARUNGEN + DEFAULTWERTE
169
170	set +o allexport # SICHERHEITSHALBER UNTERBINDEN, DA SONST EVTL. STAGEOUT
171	# NICHT LAUEFT (TOO MANY ARGUMENTS - PROBLEM)
172	set +o noclobber # EXISTIERENDE DATEIEN DUERFEN UEBERSCHRIEBEN WERDEN
173
174	AddFilenames=""
175	additional_conditions=""
176	add_source_path=""
177	afname=""
178	archive_save=true
179	archive_system=none
180	compiler_name=""
181	cond1=""
182	cond2=""
183	config_file=.mrun.config
184	coupled_dist=""
185	coupled_mode="mpi1"
186	cpp_opts=""
187	cpp_options=""
188	cpumax=0
189	cpurest=0
190	delete_temporary_catalog=true
191	do_batch=false
192	do_compile=true
193	do_remote=false
194	do_stagein=true
195	do_stageout=true
196	do_trace=false
197	email_notification=""
198	exclude=""
199	executable=""
200	execution_error=false
201	fimm=false
202	fname=test
203	fromhost=""
204	global_revision=""
205	group_number=none
206	host=""
207	host_file=""
208	hp=""
209	ignore_archive_error=false
210	input_list=""
211	interpreted_config_file=""
212	job_catalog="~/job_queue"
213	job_on_file=""
214	keep_data_from_previous_run=false
215	link_local_input=false
216	link_local_output=false
217	localhost_realname=$(hostname)
218	local_compile=false
219	locat=normal
220	mainprog=""
221	makefile=""
222	mc=$0
223	while [[ $(echo $mc \| grep -c "/") != 0 ]]
224	do
225	mc=`echo $mc \| cut -f2- -d"/"`
226	done
227	module_files=""
228	mrun_script_name=$mc
229	netcdf_inc=""
230	netcdf_lib=""
231	netcdf_support=false
232	node_usage=default
233	numprocs=""
234	numprocs_atmos=0
235	numprocs_ocean=0
236	OOPT=""
237	openmp=false
238	output_list=""
239	package_list=""
240	punkte="..........................................................."
241	queue=none
242	read_from_config=""
243	restart_run=false
244	return_addres=$(nslookup `hostname` 2>&1 \| grep "Address:" \| tail -1 \| awk '{print $2}')
245	if [[ $return_addres = 130.75.105.158 ]]
246	then
247	return_addres=172.20.25.41
248	echo "+++ WARNING: return_addres changed to $return_addres !!!!!"
249	fi
250	# if [[ $return_addres = 210.117.65.1 ]]
251	# if [[ $(nslookup `hostname` 2>&1 \| grep -c 210.117.65.1) = 1 ]]
252	# then
253	# [[ $localhost_realname = gfdl3.yonsei.ac.kr ]] && return_addres=165.132.26.56
254	# fi
255	return_password=""
256	return_username=$LOGNAME
257	remotecall=false
258	remote_username=""
259	run_coupled_model=false
260	run_mode=""
261	scirocco=false
262	store_on_archive_system=true
263	striche=" ----------------------------------------------------------------------------"
264	silent=false
265	source_list=""
266	source_path=SOURCE
267	tasks_per_node=""
268	threads_per_task=1
269	tmpcreate=false
270	tmp_data_catalog=""
271	transfer_problems=false
272	usern=$LOGNAME
273	working_directory=`pwd`
274	TOPT=""
275	XOPT=""
276	zeit=$( date \| cut -c 12-19 )
277
278	typeset -i iec=0 iic=0 iin=0 ioc=0 iout=0 memory=0 stagein_anz=0 stageout_anz=0
279	typeset -i cputime i ii iia iii iio icycle inode ival jobges jobsek maxcycle minuten nodes pes sekunden tp1
280
281	typeset -R30 calltime
282	typeset -L20 spalte1
283	typeset -L40 spalte2
284	typeset -L60 spalte3
285	typeset -L35 string1=`date`
286	typeset -L12 string2=$usern
287	typeset -L12 string3=$localhost_realname
288	typeset -L12 string4
289	typeset -L12 string5
290	typeset -L30 version="MRUN 2.0 Rev$Rev: 211 $"
291
292
293
294	# EINZELNE VARIABLE FUER HAUPTPROGRAMM EXPORTIEREN
295	export cpurest fname host localhost return_addres return_username remotecall tasks_per_node
296
297	# FOLGENDE VARIABLEN MUESSEN FUER DIE INTERPRETATION DER KONFIGURATIONSDATEI
298	# EXPORTIERT WERDEN
299	export afname config_file cpp_opts cpumax do_batch do_trace fname fromhost
300	export group_number input_list memory numprocs output_list queue run_mode
301
302
303
304	# FEHLERBEHANDLUNG
305	# BEI EXIT:
306	trap 'rm -rf $working_directory/tmp_mrun
307	if [[ $locat != localhost ]]
308	then
309	# if [[ ! -f ${mrun_path}/statistik/mrun_statistik ]]
310	# then
311	# cat > ${mrun_path}/statistik/mrun_statistik << %STATEND%
312	#MRUN-calls on $localhost
313	#
314	#date and time user localhost remotehost termination mrun-command
315	#--------------------------------------------------------------------------------------------------------------------
316	#%STATEND%
317	# chmod 666 ${mrun_path}/statistik/mrun_statistik
318	# fi
319	#
320	# # EINTRAG IN DIE STATISTIK-DATEI
321	# string4=$host
322	# string5=$locat
323	# if [[ "$job_on_file" = "" && $locat != control_c && $locat != user_abort ]]
324	# then
325	# if [[ $do_batch = true ]]
326	# then
327	# printf "$string1$string2$string3$string4$string5$mrun_com \n" >> ${mrun_path}/statistik/mrun_statistik
328	# else
329	# printf "$string1$string2$string3$string4$string5$mc \n" >> ${mrun_path}/statistik/mrun_statistik
330	# fi
331	# fi
332	echo " " > /dev/null
333	fi
334
335	if [[ $locat != normal && $locat != control_c && $locat != local_compile ]]
336	then
337
338	# EVENTUELLE ERROR-KOMMANDOS ABARBEITEN
339	(( i = 0 ))
340	while (( i < iec ))
341	do
342	(( i = i + 1 ))
343	printf "\n *** Execution of ERROR-command:\n"
344	printf " >>> ${err_command[$i]}\n"
345	eval ${err_command[$i]}
346	done
347	if [[ -n $interpreted_config_file ]] then
348	rm -rf $interpreted_config_file
349	fi
350	if [[ -n .mrun_environment ]] then
351	rm -rf .mrun_environment
352	fi
353	if [[ $tmpcreate = true ]]
354	then
355	printf "\n *** Contents of \"$TEMPDIR\":\n"
356	ls -al; cd
357	[[ $delete_temporary_catalog = true ]] && rm -rf $TEMPDIR
358	fi
359	if [[ -f ~/job_queue/JOBINFO.$QSUB_REQID ]]
360	then
361	rm -rf ~/job_queue/JOBINFO.$QSUB_REQID
362	fi
363	printf "\n\n+++ MRUN killed \n\n"
364	elif [[ $locat != control_c ]]
365	then
366	printf "\n\n --> all actions finished\n\n"
367	printf " Bye, bye $usern !!\n\n"
368	fi' exit
369
370
371	# BEI TERMINAL-BREAK:
372	trap 'rm -rf $working_directory/tmp_mrun
373	[[ $tmpcreate = true ]] && (cd; rm -rf $TEMPDIR)
374	if [[ -f ~/job_queue/JOBINFO.$QSUB_REQID ]]
375	then
376	rm -rf ~/job_queue/JOBINFO.$QSUB_REQID
377	fi
378	printf "\n+++ MRUN killed by \"^C\" \n\n"
379	locat=control_c
380	exit
381	' 2
382
383
384	# CHECK IF THE PATH FOR THE PALM BINARIES (SCRIPTS+UTILITY-PROGRAMS) HAS
385	# BEEN SET
386	if [[ "$PALM_BIN" = "" ]]
387	then
388	printf "\n +++ environment variable PALM_BIN has not been set"
389	printf "\n please set it to the directory where the PALM scripts are located"
390	locat=palm_bin; exit
391	fi
392	export PATH=$PALM_BIN:$PATH
393
394
395
396	# SHELLSCRIPT-OPTIONEN EINLESEN UND KOMMANDO NEU ZUSAMMENSETZEN, FALLS ES
397	# FUER FOLGEJOBS BENOETIGT WIRD
398	while getopts :a:AbBc:Cd:D:Fg:G:h:H:i:IkK:m:M:n:o:Op:P:q:r:R:s:St:T:u:U:vxX:Y: option
399	do
400	case $option in
401	(a) afname=$OPTARG;;
402	(A) store_on_archive_system=false; mc="$mc -A";;
403	(b) do_batch=true; mc="$mc -b";;
404	(B) delete_temporary_catalog=false; mc="$mc -B";;
405	(c) config_file=$OPTARG; mc="$mc -c$OPTARG";;
406	(C) restart_run=true; mc="$mc -C";;
407	(d) fname=$OPTARG; mc="$mc -d$OPTARG";;
408	(D) cpp_opts="$cpp_opts $OPTARG"; mc="$mc -D'$OPTARG'";;
409	(F) job_on_file="-D"; mc="$mc -F";;
410	(g) group_number=$OPTARG; mc="$mc -g$OPTARG";;
411	(G) global_revision=$OPTARG; mc="$mc -G'$OPTARG'";;
412	(h) host=$OPTARG; mc="$mc -h$OPTARG";;
413	(H) fromhost=$OPTARG; mc="$mc -H$OPTARG";;
414	(i) input_list=$OPTARG; mc="$mc -i'$OPTARG'";;
415	(I) ignore_archive_error=true; mc="$mc -I";;
416	(k) keep_data_from_previous_run=true; mc="$mc -k";;
417	(K) additional_conditions="$OPTARG"; mc="$mc -K'$OPTARG'";;
418	(m) memory=$OPTARG; mc="$mc -m$OPTARG";;
419	(M) makefile=$OPTARG; mc="$mc -M$OPTARG";;
420	(n) node_usage=$OPTARG; mc="$mc -n$OPTARG";;
421	(o) output_list=$OPTARG; mc="$mc -o'$OPTARG'";;
422	(O) use_openmp=true; mc="$mc -O";;
423	(p) package_list=$OPTARG; mc="$mc -p'$OPTARG'";;
424	(P) return_password=$OPTARG; mc="$mc -P$OPTARG";;
425	(q) queue=$OPTARG; mc="$mc -q$OPTARG";;
426	(r) run_mode=$OPTARG; mc="$mc -r'$OPTARG'";;
427	(R) remotecall=true;return_addres=$OPTARG; mc="$mc -R$OPTARG";;
428	(s) source_list=$OPTARG; mc="$mc -s'$OPTARG'";;
429	(S) read_from_config=false; mc="$mc -S";;
430	(t) cpumax=$OPTARG; mc="$mc -t$OPTARG";;
431	(T) tasks_per_node=$OPTARG; mc="$mc -T$OPTARG";;
432	(u) remote_username=$OPTARG; mc="$mc -u$OPTARG";;
433	(U) return_username=$OPTARG; mc="$mc -U$OPTARG";;
434	(v) silent=true; mc="$mc -v";;
435	(x) do_trace=true;set -x; mc="$mc -x";;
436	(X) numprocs=$OPTARG; mc="$mc -X$OPTARG";;
437	(Y) run_coupled_model=true; coupled_dist=$OPTARG; mc="$mc -Y'$OPTARG'";;
438	(\?) printf "\n +++ unknown option $OPTARG \n"
439	printf "\n --> type \"$0 ?\" for available options \n"
440	locat=parameter;exit;;
441	esac
442	done
443
444
445	# EVTL. POSITIONSPARAMETER EINLESEN
446	# ZUR ZEIT GIBT ES NUR DEN PARAMETER ? (=KURZINFO)
447	shift OPTIND-1
448
449
450	# KURZE AUFRUFBESCHREIBUNG WIRD HIER AUSGEGEBEN
451	if [[ "$1" = "?" ]]
452	then
453	(printf "\n *** mrun can be called as follows:\n"
454	printf "\n $mrun_script_name -b -c.. -d.. -D.. -f.. -F -h.. -i.. -I -K.. -m.. -o.. -p.. -r.. -R -s.. -t.. -T.. -v -x -X.. -Y.. <modus>\n"
455	printf "\n Description of available options:\n"
456	printf "\n Option Description Default-Value"
457	printf "\n -a base name of input files equiv. -d"
458	printf "\n -A no archiving when using file-attribute fl"
459	printf "\n -b batch-job on local machine ---"
460	printf "\n -B do not delete temporary directory at end ---"
461	printf "\n -c configuration file .mrun.config"
462	printf "\n -d base name of files attached to program test"
463	printf "\n -D preprocessor(cpp)-directives \"\" "
464	printf "\n -F create remote job file only ---"
465	printf "\n -h execution host $localhost_realname"
466	printf "\n -i INPUT control list \"\" "
467	printf "\n -I archiving errors of previous batch-jobs"
468	printf "\n will be ignored"
469	printf "\n -k keep data from previous run"
470	printf "\n -K additional conditions for controling"
471	printf "\n usage of conditional code and"
472	printf "\n env-variables in configuration file \"\" "
473	printf "\n -m memory demand in MB (batch-jobs) 0 MB"
474	printf "\n -M Makefile name Makefile"
475	printf "\n -n node usage (shared/not_shared) depending on -h"
476	printf "\n -o OUTPUT control list \"\" "
477	printf "\n -O use OpenMP ---"
478	printf "\n -p software package list \"\" "
479	printf "\n -q queue \"$queue\" "
480	printf "\n -r run control list (combines -i -o) \"\" "
481	printf "\n -s filenames of routines to be compiled \"\" "
482	printf "\n must end with .f, .f90, .F, or .c !"
483	printf "\n use \"..\" for more than one file and wildcards"
484	printf "\n -s TEST compiles all files with w-permit"
485	printf "\n -S config file interpreted by shellscript ---"
486	printf "\n -t allowed cpu-time in seconds (batch) 0"
487	printf "\n -T tasks per node depending on -h"
488	printf "\n -u username on remote machine \"\" "
489	printf "\n -v no prompt for confirmation ---"
490	printf "\n -x tracing of mrun for debug purposes ---"
491	printf "\n -X # of processors (on parallel machines) 1"
492	printf "\n -Y run coupled model, \"#1 #2\" with"
493	printf "\n #1 atmosphere and #2 ocean processors \"#/2 #/2\" depending on -X"
494	printf "\n "
495	printf "\n Possible values of positional parameter <modus>:"
496	printf "\n \"?\" - this outline \n\n") \| more
497	exit
498	elif [[ "$1" != "" ]]
499	then
500	printf "\n +++ positional parameter $1 unknown \n"
501	locat=parameter; exit
502	fi
503
504
505
506	# KURZE STARTMELDUNG
507	printf "\n*** $version "
508	printf "\n will be executed. Please wait ..."
509
510
511
512	# PRUEFEN, OB KONFIGURATIONS-DATEI VORHANDEN
513	if [[ ! -f $config_file ]]
514	then
515	printf "\n\n +++ configuration file: "
516	printf "\n $config_file"
517	printf "\n does not exist"
518	locat=connect; exit
519	fi
520
521
522	# HOST-IDENTIFIER (local_host) AUS KONFIGURATIONSDATEI BESTIMMEN
523	line=""
524	grep "%host_identifier" $config_file > tmp_mrun
525	while read line
526	do
527	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
528	then
529	HOSTNAME=`echo $line \| cut -d" " -s -f2`
530	host_identifier=`echo $line \| cut -d" " -s -f3`
531	if [[ $localhost_realname = $HOSTNAME ]]
532	then
533	localhost=$host_identifier
534	break
535	fi
536	fi
537	done < tmp_mrun
538
539	if [[ "$localhost" = "" ]]
540	then
541	printf "\n\n +++ no host identifier found in configuration file \"$config_file\""
542	printf "\n for local host \"$localhost_realname\"."
543	printf "\n Please add line"
544	printf "\n \"\%host_identifier $localhost_realname <identifier>\""
545	printf "\n to the configuration file."
546	locat=localhost; exit
547	fi
548
549
550	# HOSTSPEZIFISCHE VARIABLEN SETZEN
551	case $localhost_realname in
552	(breg-en0\|berni-en0) archive_system=tivoli;;
553	(cs*) archive_system=ut;;
554	(fimm.bccs.uib.no) fimm=true;;
555	(gate\|n-sx) PATH=$PALM_BIN:$PATH:/usr/bin/nqsII;;
556	(hreg-en0\|hanni-en0) archive_system=tivoli;;
557	(scirocco) scirocco=true;;
558	esac
559
560
561
562	# BASISNAME DER INPUT-DATEIEN GLEICH ALLGEMEINEM BASISNAMEN SETZEN,
563	# WENN NICHT VOM BENUTZER ANDERS BESTIMMT
564	[[ "$afname" = "" ]] && afname=$fname
565
566
567	# EVTL. RUN-MODUS DEN I/O-LISTEN HINZUFUEGEN
568	if [[ "$run_mode" != "" ]]
569	then
570	input_list="$input_list $run_mode"
571	output_list="$output_list $run_mode"
572	fi
573
574
575	# RECHNERNAMEN ABSPEICHERN, VON DEM AUS JOB GESTARTET WIRD,
576	# ALLERDINGS NUR DANN, WENN NICHT PER OPTION -H BEREITS EIN WERT
577	# ZUGEWIESEN WURDE (MRUN MACHT DIES IMMER, WENN ES SELBST BATCH-JOBS
578	# STARTET)
579	if [[ "$fromhost" = "" ]]
580	then
581	fromhost=$localhost
582	fi
583
584
585	# PRUEFEN, OB MRUN NUR TESTWEISE AUF DER LOKALEN MASCHINE KOMPILIEREN SOLL
586	if [[ "$source_list" = LOCAL_COMPILE_TEST ]]
587	then
588	source_list=TEST
589	local_compile=true
590	host=$localhost
591	fi
592
593
594	# PRUEFEN, OB AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL
595	# WERT VON do_remote WIRD FUER DATEIVERBINDUNGEN BENOETIGT.
596	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
597	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
598	if [[ -n $host && "$host" != $localhost ]]
599	then
600	do_batch=true
601	do_remote=true
602	case $host in
603	(ibm\|ibmb\|ibmh\|ibms\|ibmy\|nech\|neck\|lcsgib\|lcsgih\|lctit\|unics\|lcxt4) true;;
604	(*) printf "\n"
605	printf "\n +++ sorry: execution of batch jobs on remote host \"$host\""
606	printf "\n is not available"
607	locat=nqs; (( iec = 0 )); exit;;
608	esac
609	else
610	host=$localhost
611	fi
612
613
614	# ZUSATZBEDINGUNGEN (OPTION -K) AUSWERTEN
615	if [[ -n $additional_conditions ]]
616	then
617	# echo $additional_conditions \| cut -d" " -f1-3 \| read cond1 cond2 dummy
618	cond1=`echo $additional_conditions \| cut -d" " -f1`
619	cond2=`echo $additional_conditions \| cut -d" " -s -f2`
620	dummy=`echo $additional_conditions \| cut -d" " -s -f3`
621	if [[ -n $dummy ]]
622	then
623	printf "\n +++ more than 2 additional conditions given for Option \"-K\""
624	locat=options; exit
625	fi
626	fi
627
628
629	# KOPPLUNGSEIGENSCHAFTEN (-Y) AUSWERTEN UND coupled_mode BESTIMMEN
630	if [[ $run_coupled_model = true ]]
631	then
632
633	if [[ -n $coupled_dist ]]
634	then
635
636	numprocs_atmos=`echo $coupled_dist \| cut -d" " -s -f1`
637	numprocs_ocean=`echo $coupled_dist \| cut -d" " -s -f2`
638
639	if (( $numprocs_ocean + $numprocs_atmos != $numprocs ))
640	then
641
642	printf "\n +++ number of processors does not fit to specification by \"-Y\"."
643	printf "\n PEs (total) : $numprocs"
644	printf "\n PEs (atmosphere): $numprocs_atmos"
645	printf "\n PEs (ocean) : $numprocs_ocean"
646	locat=coupling; exit
647
648	# REARRANGING BECAUSE CURRENTLY ONLY 1:1 TOPOLOGIES ARE SUPPORTED
649	# THIS SHOULD BE REMOVED IN FUTURE
650	elif (( $numprocs_ocean != $numprocs_atmos ))
651	then
652
653	printf "\n +++ currently only 1:1 topologies are supported"
654	printf "\n PEs (total) : $numprocs"
655	printf "\n PEs (atmosphere): $numprocs_atmos"
656	printf "\n PEs (ocean) : $numprocs_ocean"
657	(( numprocs_atmos = $numprocs / 2 ))
658	(( numprocs_ocean = $numprocs / 2 ))
659	printf "\n +++ rearranged topology to $numprocs_atmos:$numprocs_ocean"
660
661	fi
662
663	else
664
665	(( numprocs_ocean = $numprocs / 2 ))
666	(( numprocs_atmos = $numprocs / 2 ))
667
668	fi
669	coupled_dist=`echo "$numprocs_atmos $numprocs_ocean"`
670
671	# GET coupled_mode FROM THE CONFIG FILE
672	line=""
673	grep "%cpp_options.-D__mpi2.$host" $config_file > tmp_mrun
674	while read line
675	do
676	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" && ( $(echo $line \| cut -d" " -s -f4) = $cond1 \|\| $(echo $line \| cut -d" " -s -f4) = $cond2 ) ]]
677	then
678	coupled_mode="mpi2"
679	fi
680	done < tmp_mrun
681
682	fi
683
684
685	# PRUEFEN, OB EVTL. BEI VORHERGEHENDEM LAUF (KETTENJOB) EINE
686	# ARCHIVIERUNG FEHLGESCHLAGEN IST
687	if [[ -f ~/job_queue/ARCHIVE_ERROR_$fname ]]
688	then
689	if [[ $ignore_archive_error = false ]]
690	then
691	printf "\n +++ data archiving of previous run failed"
692	printf "\n see directory \~/job_queue on remote machine"
693	locat=archive; exit
694	else
695	printf "\n +++ warning: data archiving in a previous run failed"
696	printf "\n MRUN continues, trying to get backup copy"
697	fi
698	fi
699
700
701
702	# LESEN UND INTERPRETIEREN DER KONFIGURATIONS-DATEI VOM SHELLSCRIPT AUS
703	# VORUEBERGEHEND ZWINGEND AUF LINUX-RECHNERN
704	if [[ "$read_from_config" = false ]]
705	then
706
707	[[ $silent = false ]] && printf "\n Reading the configuration file... "
708	while read zeile
709	do
710	[[ $silent = false ]] && printf "."
711
712
713	# ZUERST EVENTUELL VORKOMMENDE ENVIRONMENT-VARIABLEN DURCH IHRE WERTE
714	# ERSETZEN
715	eval zeile=\"$zeile\"
716
717
718	# INTERPRETATION DER ZEILE
719	if [[ "$(echo $zeile)" = "" ]]
720	then
721	# LEERZEILE, KEINE AKTION
722	continue
723
724	elif [[ "$(echo $zeile \| cut -c1)" = "#" ]]
725	then
726
727	# ZEILE IST KOMMENTARZEILE
728	true
729
730	elif [[ "$(echo $zeile \| cut -c1)" = "%" ]]
731	then
732
733	# ZEILE DEFINIERT ENVIRONMENT-VARIABLE
734	zeile=$(echo $zeile \| cut -c2-)
735	# echo $zeile \| cut -d" " -f1-5 \| read var value for_host for_cond1 for_cond2
736	var=`echo $zeile \| cut -d" " -f1`
737	value=`echo $zeile \| cut -d" " -s -f2`
738	for_host=`echo $zeile \| cut -d" " -s -f3`
739	for_cond1=`echo $zeile \| cut -d" " -s -f4`
740	for_cond2=`echo $zeile \| cut -d" " -s -f5`
741
742	if [[ "$for_host" = "" \|\| ( "$for_host" = $host && "$for_cond1" = "$cond1" && "$for_cond2" = "$cond2" ) \|\| $(echo "$input_list$output_list"\|grep -c "$for_host") != 0 ]]
743	then
744
745	# BEI COMPILER- CPP- ODER LINKEROPTIONEN EVTL ":" DURCH " "
746	# ERSETZEN. "::" WIRD DURCH ":" ERSETZT.
747	value=`echo $value \| sed 's/::/%DUM%/g' \| sed 's/:/ /g' \| sed 's/%DUM%/:/g'`
748
749
750	# ENVIRONMENT-VARIABLE WIRD WERT AUS KONFIGURATIONSDATEI
751	# ZUGEWIESEN, WENN SIE SELBST NOCH KEINEN WERT UEBER DIE
752	# ENTSPRECHENDE SCRIPT-OPTION ERHALTEN HAT. SOLCHE
753	# VARIABLEN HAETTEN DANN DEN WERT "" ODER IM INTEGER-FALL DEN
754	# WERT 0. ALLGEMEINE REGEL ALSO: SCRIPT-OPTION GEHT UEBER
755	# KONFIGURATIONSDATEI
756	if [[ "$(eval echo \$$var)" = "" \|\| "$(eval echo \$$var)" = "0" ]]
757	then
758	eval $var=\$value
759
760	# EVTL. BILDSCHIRMAUSGABEN DER ENVIRONMENT-VARIABLEN
761	if [[ $do_trace = true ]]
762	then
763	printf "\n*** ENVIRONMENT-VARIABLE $var = $value"
764	fi
765	fi
766
767	# WENN ENVIRONMENT-VARIABLE HOST VEREINBART, DANN SOFORT AUSWERTEN
768	# WERT VON do-remote WIRD BEI DATEIVERBINDUNGEN BENOETIGT
769	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
770	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
771	if [[ $var = host ]]
772	then
773	if [[ -n $host && "$host" != $localhost ]]
774	then
775	do_batch=true
776	do_remote=true
777	case $host in
778	(ibm\|ibms\|ibmy\|lcsgib\|lcsgih\|lctit\|nech\|neck\|unics\|lcxt4) true;;
779	(*) printf "\n +++ sorry: execution of batch jobs on remote host \"$host\""
780	printf "\n is not available"
781	locat=nqs; exit;;
782	esac
783	else
784	host=$localhost
785	fi
786	fi
787
788	# VOM BENUTZER DEFINIERTE ENVIRONMENT VARIABLEN MUESSEN PRINZIPIELL
789	# EXPORTIERT WERDEN, DA SIE VIELLEICHT IN WEITER UNTEN AUFZURUFEN-
790	# DEN PROGRAMMEN BENOETIGT WERDEN
791	export $var
792	fi
793
794
795
796
797	elif [[ "$(echo $zeile \| cut -c1-3)" = "EC:" ]]
798	then
799
800	# ZEILE DEFINIERT ERROR-KOMMANDO
801	(( iec = iec + 1 ))
802	zeile=$(echo $zeile \| cut -c4-)
803	err_command[$iec]="$zeile"
804
805	elif [[ "$(echo $zeile \| cut -c1-3)" = "IC:" ]]
806	then
807
808	# ZEILE DEFINIERT INPUT-KOMMANDO
809	(( iic = iic + 1 ))
810	zeile=$(echo $zeile \| cut -c4-)
811	in_command[$iic]="$zeile"
812
813	elif [[ "$(echo $zeile \| cut -c1-3)" = "OC:" ]]
814	then
815
816	# ZEILE DEFINIERT OUTPUT-KOMMANDO
817	(( ioc = ioc + 1 ))
818	zeile=$(echo $zeile \| cut -c4-)
819	out_command[$ioc]="$zeile"
820
821	else
822
823	# ZEILE DEFINIERT DATEIVERBINDUNG. EINLESEN DER DATEIEIGENSCHAFTEN
824	# s2a: in/out - Feld
825	# s2b: loc - Feld (optional)
826	# s2c: tr/ar - Feld (optional)
827	# echo $zeile \| cut -d" " -f1-2 \| read s1 s2
828	s1=`echo $zeile \| cut -d" " -f1`
829	s2=`echo $zeile \| cut -d" " -s -f2`
830	s2a=$(echo $s2 \| cut -d":" -f1)
831	if [[ $(echo $s2 \| grep -c ":") = 0 ]]
832	then
833	s2b=""
834	s2c=""
835	else
836	# echo $s2 \| cut -d":" -f2-3 \| sed 's/:/ /g' \| read s2b s2c
837	s2b=`echo $s2 \| cut -d":" -f2 \| sed 's/:/ /g'`
838	s2c=`echo $s2 \| cut -d":" -s -f3 \| sed 's/:/ /g'`
839	fi
840	# echo $zeile \| cut -d" " -f3-6 \| read s3 s4 s5 s6
841	s3=`echo $zeile \| cut -d" " -f3`
842	s4=`echo $zeile \| cut -d" " -s -f4`
843	s5=`echo $zeile \| cut -d" " -s -f5`
844	s6=`echo $zeile \| cut -d" " -s -f6`
845
846
847	# ABSPEICHERN DER DATEIVERBINDUNG, FALLS IN INPUT- ODER OUTPUT-LIST
848	# VERMERKT. VARIABLE S3 KANN AUCH LISTE ENTHALTEN (FELDTRENNER ":")
849	# DATEIVERBINDUNG WIRD DANN NICHT ABGESPEICHERT UND GEPRUEFT, WENN
850	# PROGRAMMLAUF AUF REMOTE-MASCHINE ERFOLGT UND DATEI NUR LOKAL VOR-
851	# HANDEN SEIN MUSS (D.H. s2b = loc)
852	IFSALT="$IFS"; IFS="$IFS:"
853	if [[ "$s2a" = in && ! ( $do_remote = true && ( "$s2b" = loc \|\| "$s2b" = locopt ) ) ]]
854	then
855	found=false
856	for actual in $input_list
857	do
858	for formal in $s3
859	do
860	[[ $actual = $formal \|\| "$formal" = "-" ]] && found=true
861	done
862	done
863	if [[ $found = true ]]
864	then
865	(( iin = iin + 1 ))
866	localin[$iin]=$s1; transin[$iin]=$s2b; actionin[$iin]=$s2c;
867	typein[$iin]=$s3; pathin[$iin]=$s4; endin[$iin]=$s5;
868	extin[$iin]=$s6
869	fi
870	elif [[ "$s2a" = out && ! ( $do_remote = true && "$s2b" = loc ) ]]
871	then
872	found=false
873	for actual in $output_list
874	do
875	for formal in $s3
876	do
877	[[ $actual = $formal \|\| "$formal" = "-" ]] && found=true
878	done
879	done
880	if [[ $found = true ]]
881	then
882	(( iout = iout + 1 ))
883	localout[$iout]=$s1; actionout[$iout]=$s2c; typeout[$iout]=$s3;
884	pathout[$iout]=$s4; endout[$iout]=$s5; extout[$iout]=$s6
885	fi
886	elif [[ "$s2a" != in && "$s2a" != out ]]
887	then
888	printf "\n +++ I/O-attribute in configuration file $config_file has the invalid"
889	printf "\n value \"$s2\". Only \"in\" and \"out\" are allowed!"
890	locat=connect; exit
891	fi
892	IFS="$IFSALT"
893	fi
894	done < $config_file
895
896	else
897
898
899	# INTERPRETATION DER KONFIGURATIONSDATEI MITTELS FORTRAN 90 - PROGRAMM
900	[[ $silent = false ]] && printf "..."
901	export cond1 cond2 config_file do_remote do_trace input_list localhost output_list
902	export interpreted_config_file=.icf.$RANDOM
903
904
905
906	# ENVIRONMENT-VARIABLEN FUER INTERPRET_CONFIG UEBER NAMELIST_DATEI ZUR
907	# VERFUEGUNG STELLEN
908	cat > .mrun_environment << %%END%%
909	&mrun_environment cond1 = '$cond1', cond2 = '$cond2',
910	config_file = '$config_file', do_remote = '$do_remote',
911	do_trace = '$do_trace', host = '$host',
912	input_list = '$input_list', icf = '$interpreted_config_file',
913	localhost = '$localhost', output_list = '$output_list' /
914
915	%%END%%
916
917	# WERTE VON MRUN-OPTIONEN SICHERN UND DAMIT GEGEBENENFALLS SPAETER DIE
918	# IN DER KONFIGURAIONSDATEI ANGEGEBENEN WERTE UEBERSTEUERN
919	mrun_memory=$memory
920	mrun_group_number=$group_number
921	mrun_cpumax=$cpumax
922	mrun_numprocs=$numprocs
923
924	if [[ $localhost_realname = "gate" ]]
925	then
926	interpret_config_gate.x
927	else
928	interpret_config.x
929	fi
930	rm .mrun_environment
931
932
933	# AUSFUEHRUNG DER GENERIERTEN SHELL-KOMMANDOS IN DIESER SHELL
934	chmod u+x $interpreted_config_file
935	export PATH=$PATH:.
936	. $interpreted_config_file
937	rm $interpreted_config_file
938
939
940	# OPTIONSWERTE UEBERSTEUERN KONFIGURATIONSDATEI
941	[[ $mrun_memory != 0 ]] && memory=$mrun_memory
942	[[ "$mrun_group_number" != "none" ]] && group_number=$mrun_group_number
943	[[ $mrun_cpumax != 0 ]] && cpumax=$mrun_cpumax
944	[[ "$mrun_numprocs" != "" ]] && numprocs=$mrun_numprocs
945
946	fi
947
948
949	# QUELLTEXTVERZEICHNIS AUF LOKALER MASCHINE AUS KONFIGURATIONSDATEI
950	# BESTIMMEN (WUERDE SONST EVTL. DAS VERZEICHNIS DES JEWEILS UNTER -h
951	# ANGEGEBENEN REMOTE-RECHNERS SEIN)
952	# BEI BATCH-JOBS SIND DIE ZU UEBERSETZENDEN PROGRAMMTEILE SCHON KOMPLETT
953	if [[ "$SOURCES_COMPLETE" = "" ]]
954	then
955
956	# ZUERST PRUEFEN, OB EIN GLOBALER QUELLTEXTPFAD FUER ALLE RECHNER
957	# VEREINBART WURDE
958	source_path=""
959	line=""
960	grep "%source_path" $config_file > tmp_mrun
961	while read line
962	do
963	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
964	then
965	if [[ "$(echo $line \| cut -d" " -f3)" = "" ]]
966	then
967	global_source_path=`echo $line \| cut -d" " -f2`
968	fi
969	fi
970	done < tmp_mrun
971
972	line=""
973	found=false
974	grep " $localhost" $config_file \| grep "%source_path" > tmp_mrun
975	while read line
976	do
977	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
978	then
979	if [[ $found = true ]]
980	then
981	printf "\n\n +++ more than one source path found in configuration file"
982	printf "\n for local host \"$localhost\" "
983	locat=source_path; exit
984	fi
985	source_path=`echo $line \| cut -d" " -f2`
986	found=true
987	fi
988	done < tmp_mrun
989	rm tmp_mrun
990
991	if [[ "$source_path" = "" ]]
992	then
993	if [[ "$global_source_path" != "" ]]
994	then
995	source_path=$global_source_path
996	else
997	printf "\n\n +++ no source path found in configuration file"
998	printf "\n for local host \"$localhost\" "
999	locat=source_path; exit
1000	fi
1001	fi
1002	eval source_path=$source_path
1003
1004	if [[ ! -d $source_path ]]
1005	then
1006	printf "\n\n +++ source path \"$source_path\" on local host"
1007	printf "\n \"$localhost\" does not exist"
1008	locat=source_path; exit
1009	fi
1010
1011	fi
1012
1013
1014	# GLOBALE REVISIONSNUMMER ERMITTELN (FORTSETZUNGSLAEUFEN WIRD DIESE
1015	# DURCH OPTION -G MITGETEILT)
1016	if [[ "$global_revision" = "" ]]
1017	then
1018	global_revision=`svnversion $source_path 2>/dev/null`
1019	global_revision="Rev: $global_revision"
1020	fi
1021
1022
1023	# NOCHMAL PRUEFEN, OB AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL
1024	# (HOST KANN IN KONFIGURATIONSDATEI ANDERS FESTGELEGT WORDEN SEIN)
1025	# WERT VON do_remote WIRD FUER DATEIVERBINDUNGEN BENOETIGT.
1026	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
1027	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
1028	if [[ -n $host && "$host" != $localhost ]]
1029	then
1030	do_batch=true
1031	do_remote=true
1032	case $host in
1033	(ibm\|ibmb\|ibmh\|ibms\|ibmy\|lcsgib\|lcsgih\|lctit\|nech\|neck\|unics\|lcxt4) true;;
1034	(*) printf "\n"
1035	printf "\n +++ sorry: execution of batch jobs on remote host \"$host\""
1036	printf "\n is not available"
1037	locat=nqs; (( iec = 0 )); exit;;
1038	esac
1039	else
1040	host=$localhost
1041	fi
1042
1043
1044	# PRUEFUNG EINIGER PROZESSORZAHLANGABEN BEI RECHNUNGEN AUF PARALLELRECHNERN
1045	if [[ "$cond1" = parallel \|\| "$cond2" = parallel ]]
1046	then
1047
1048	# PRUEFEN, OB DIE ANZAHL DER ZU VERWENDENDEN PES ANGEGEBEN WURDE
1049	if [[ ! -n $numprocs ]]
1050	then
1051	printf "\n"
1052	printf "\n +++ option \"-K parallel\" requires additional specification"
1053	printf "\n of the number of processors to be used by"
1054	printf "\n mrun-option \"-X\" or by environment-variable"
1055	printf "\n \"numprocs\" in the configuration file"
1056	locat=numprocs; (( iec = 0 )); exit
1057	fi
1058
1059	# PRUEFEN, OB DIE PROZESSORANZAHL PRO KNOTEN ANGEGEBEN WURDE (GGF.
1060	# DEFAULT-WERT SETZEN) UND OB SIE EIN GANZZAHLIGER TEILER DER
1061	# GESAMTPROZESSORANZAHL IST
1062	if [[ $host = nech \|\| $host = neck \|\| $host = ibmh \|\| $host = ibmb \|\| $host = ibms ]]
1063	then
1064	[[ "$tasks_per_node" = "" ]] && tasks_per_node=6
1065	(( ival = $tasks_per_node ))
1066	(( pes = numprocs ))
1067	# if [[ $(echo $package_list \| grep -c dvrp_graphics+1PE) = 1 ]]
1068	# then
1069	# (( pes = pes - 1 ))
1070	# fi
1071	(( ii = pes / ival ))
1072	if (( pes - ii * ival > 0 ))
1073	then
1074	printf "\n"
1075	printf "\n +++ tasks per node (option \"-T\") must be an integral"
1076	printf "\n divisor of the total number of processors (option \"-X\")"
1077	printf "\n values of this mrun-call: \"-T $tasks_per_node\" \"-X $numprocs\""
1078	locat=tasks_per_node; (( iec = 0 )); exit
1079	fi
1080	fi
1081
1082	# IBMY HAT NUR EINEN KNOTEN
1083	if [[ $host = ibmy ]]
1084	then
1085	if [[ "$tasks_per_node" != "" && "$tasks_per_node" != "$numprocs" ]]
1086	then
1087	printf "\n"
1088	printf "\n +++ on ibmy, tasks per node (option \"-T\") must be equal to the"
1089	printf "\n total number of processors (option \"-X\")"
1090	printf "\n values of this mrun-call: \"-T $tasks_per_node\" \"-X $numprocs\""
1091	locat=tasks_per_node; (( iec = 0 )); exit
1092	fi
1093	fi
1094
1095	# FALLS OPENMP PARALLELISIERUNG VERWENDET WERDEN SOLL, ANZAHL VON THREADS
1096	# SETZEN UND ZAHL DER TASKS PRO KNOTEN AUF 1 SETZEN
1097	if [[ $use_openmp = true ]]
1098	then
1099	threads_per_task=$tasks_per_node
1100	tasks_per_node=1
1101	fi
1102	OOPT="-O $threads_per_task"
1103	TOPT="-T $tasks_per_node"
1104
1105	# GESAMTZAHL DER KNOTEN BESTIMMEN
1106	if [[ "$tasks_per_node" != "" ]]
1107	then
1108	(( nodes = numprocs / ( tasks_per_node * threads_per_task ) ))
1109	fi
1110
1111	# PRUEFEN, OB NODE USAGE EINEN ERLAUBTEN WERT HAT BZW. DEN DEFAULT
1112	# SETZEN
1113	if [[ $node_usage = default ]]
1114	then
1115	if [[ $host = ibms ]]
1116	then
1117	node_usage=shared
1118	elif [[ $host = lctit ]]
1119	then
1120	node_usage=sla3
1121	elif [[ $(echo $host \| cut -c1-5) = lcsgi ]]
1122	then
1123	node_usage=singlejob
1124	else
1125	node_usage=not_shared
1126	fi
1127	fi
1128
1129	if [[ $node_usage != shared && $node_usage != not_shared && $node_usage != singlejob && "$(echo $node_usage \| cut -c1-3)" != "sla" && $node_usage != novice ]]
1130	then
1131	printf "\n"
1132	printf "\n +++ node usage (option \"-n\") is only allowed to be set"
1133	printf "\n \"shared\" or \"not_shared\""
1134	locat=tasks_per_node; (( iec = 0 )); exit
1135	fi
1136
1137	fi
1138
1139	# PRUEFEN, OB HOSTFILE EXISTIERT
1140	if [[ -n $hostfile ]]
1141	then
1142	if [[ ! -f $hostfile ]]
1143	then
1144	printf "\n"
1145	printf "\n +++ hostfile \"$hostfile\" does not exist"
1146	locat=hostfile; exit
1147	fi
1148	fi
1149
1150	# PRUEFEN, OB RHOSTS DATEI EXISTIERT. GEGEBENENFALLS ANLEGEN BZW. ERWEITERN
1151	if [[ $host = ibmy && $do_remote = false ]]
1152	then
1153	if [[ ! -f $HOME/.rhosts ]]
1154	then
1155	echo "gfdl5.yonsei.ac.kr" > $HOME/.rhosts
1156	printf "\n\n *** file:"
1157	printf "\n $HOME/.rhosts"
1158	printf "\n was created\n"
1159	fi
1160	if [[ $(grep -c gfdl5.yonsei.ac.kr $HOME/.rhosts) = 0 ]]
1161	then
1162	echo "gfdl5.yonsei.ac.kr" >> $HOME/.rhosts
1163	printf "\n\n *** file:"
1164	printf "\n $HOME/.rhosts"
1165	printf "\n was extended by the name of the current host\n"
1166	fi
1167	fi
1168
1169
1170
1171	# FALLS NICHT VORGEGEBEN, DEFAULT-QUEUE AUF DER ZIELMASCHINE FESTLEGEN
1172	if [[ $queue = none ]]
1173	then
1174	case $host in
1175	(ibmb) if [[ $node_usage = shared ]]
1176	then
1177	queue=cshare
1178	else
1179	queue=csolo
1180	fi;;
1181	(ibmh) if [[ $node_usage = shared ]]
1182	then
1183	queue=cshare
1184	else
1185	queue=csolo
1186	fi;;
1187	(ibmy) queue=parallel;;
1188	(lcsgib) queue=bigq;;
1189	(lcsgih) queue=bigq;;
1190	(lctit) queue=sla3;;
1191	(nech) queue=none;;
1192	(neck) queue=P;;
1193	(unics) queue=unics;;
1194	esac
1195	fi
1196
1197
1198	# VOLLSTAENDIGE DATEINAMEN DER INPUT-FILES BILDEN,
1199	# INPUT-DATEIEN AUF VORHANDENSEIN PRUEFEN UND EVTL. HOECHSTE ZYKLUSNUMMER
1200	# ERMITTELN
1201	(( i = 0 ))
1202	while (( i < iin ))
1203	do
1204	(( i = i + 1 ))
1205	(( maxcycle = 0 ))
1206
1207	# NAMENSBILDUNG (EVTL. IST FESTER DATEINAME VORGEGEBEN)
1208	if [[ "${actionin[$i]}" = di ]]
1209	then
1210	remotepathin[$i]=${pathin[$i]}/${endin[$i]} # REMOTE-PFAD ERST AUF
1211	# REM-MASCHINE AUSWERTEN
1212	eval filename=${pathin[$i]}/${endin[$i]}
1213	else
1214	remotepathin[$i]=${pathin[$i]}/${afname}${endin[$i]} # REMOTE-PFAD ERST AUF
1215	# REM-MASCHINE AUSWERTEN
1216	eval filename=${pathin[$i]}/${afname}${endin[$i]}
1217	fi
1218
1219	# PRUEFEN AUF VORHANDENSEIN
1220	if [[ $(ls $filename* 2>&1 \| grep -c "not found") = 1 \|\| \
1221	$(ls $filename* 2>&1 \| grep -c "No such file") = 1 \|\| \
1222	$(ls $filename* 2>&1 \| grep -c "does not exist") = 1 ]]
1223	then
1224	# DATEIEN MIT EXTENSION (Z.B. NC) MUESSEN NICHT ZWINGEND VORHANDEN
1225	# SEIN, DESHALB IN SOLCHEN FAELLEN KEIN ABBRUCH. DIES IST NUR EINE
1226	# VORUEBERGEHENDE LOESUNG (OKT 05). NICHT ZWINGEND BENOETIGTE
1227	# EINGABEDATEIEN SOLLTEN EINE SPEZIELLE OPTION IN DER DATEI-
1228	# VERBINDUNGSANWEISUNG BEKOMMEN (Z.B. inopt?)
1229	if [[ "${transin[$i]}" != "locopt" ]]
1230	then
1231	printf "\n\n +++ INPUT-file: "
1232	if [[ "${extin[$i]}" = "" ]]
1233	then
1234	printf "\n $filename"
1235	else
1236	printf "\n $filename.${extin[$i]}"
1237	fi
1238	printf "\n does not exist\n"
1239	locat=input; exit
1240	else
1241	transin[$i]="unavailable"
1242	fi
1243	else
1244
1245	# ZYKLUSNUMMER FESTSTELLEN
1246	ls -1 -d $filename > filelist 2>/dev/null
1247	ls -1 -d $filename.* >> filelist 2>/dev/null
1248	while read zeile
1249	do
1250	cycle=$(print $zeile \| cut -f2 -d".")
1251	if [[ "$cycle" = "$zeile" ]]
1252	then
1253	(( icycle = 0 ))
1254	elif [[ "$cycle" = "${extin[$i]}" ]]
1255	then
1256	(( icycle = 0 ))
1257	else
1258	(( icycle = $cycle ))
1259	fi
1260	if (( icycle > maxcycle ))
1261	then
1262	(( maxcycle = icycle ))
1263	file_to_be_used=$zeile
1264	fi
1265	done <filelist
1266	rm filelist
1267
1268	# EVTL. ZYKLUSNUMMER AN DATEINAMEN ANFUEGEN
1269	if (( maxcycle > 0 ))
1270	then
1271	if [[ "${extin[$i]}" != " " && "${extin[$i]}" != "" ]]
1272	then
1273	filename=${filename}.$maxcycle.${extin[$i]}
1274	else
1275	filename=${filename}.$maxcycle
1276	fi
1277	else
1278	if [[ "${extin[$i]}" != " " && "${extin[$i]}" != "" ]]
1279	then
1280	filename=${filename}.${extin[$i]}
1281	fi
1282	fi
1283
1284	# DATEINAMEN OHNE PFAD ABER MIT ZYKLUSNUMMER ABSPEICHERN,
1285	# DA SPAETER BEI RUECKSPEICHERN VOM ARCHIVSYSTEM EVTL. BENOETIGT
1286	absnamein[$i]=$filename
1287	if (( maxcycle > 0 ))
1288	then
1289	if [[ "${actionin[$i]}" = di ]]
1290	then
1291	frelin[$i]=${endin[$i]}.$maxcycle
1292	else
1293	frelin[$i]=${afname}${endin[$i]}.$maxcycle
1294	fi
1295	else
1296	if [[ "${actionin[$i]}" = di ]]
1297	then
1298	frelin[$i]=${endin[$i]}
1299	else
1300	frelin[$i]=${afname}${endin[$i]}
1301	fi
1302	fi
1303
1304	fi
1305	done
1306
1307
1308	# VOLLSTAENDIGE DATEINAMEN (OHNE $ ODER ~) DER OUTPUT-FILES BILDEN,
1309	# OUTPUT-DATEIEN AUF VORHANDENSEIN PRUEFEN UND EVTL. HOECHSTE ZYKLUSNUMMER
1310	# ERMITTELN ODER, FALLS NICHT VORHANDEN, PRUEFEN, OB SIE SICH ANLEGEN LASSEN
1311	# DIESE AKTIONEN FINDEN NICHT STATT, WENN PROGRAMM AUF REMOTE-MASCHINE
1312	# RECHNET UND DATEI ANSCHLIESSEND TRANSFERIERT WERDEN SOLL!
1313	(( i = 0 ))
1314	while (( i < iout ))
1315	do
1316	(( i = i + 1 ))
1317	if [[ ! ( $fromhost != $localhost && ( "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = tra \|\| "${actionout[$i]}" = trpe ) ) ]]
1318	then
1319	if [[ "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = trpe ]]
1320	then
1321	actionout[$i]=""
1322	elif [[ "${actionout[$i]}" = tra ]]
1323	then
1324	actionout[$i]=a
1325	fi
1326	(( maxcycle = 0 ))
1327	eval filename=${pathout[$i]}/${fname}${endout[$i]}
1328	eval catalogname=${pathout[$i]}
1329	if [[ $(ls $filename* 2>&1 \| grep -c "not found") = 1 \|\| \
1330	$(ls $filename* 2>&1 \| grep -c "No such file") = 1 \|\| \
1331	$(ls $filename* 2>&1 \| grep -c "does not exist") = 1 ]]
1332	then
1333
1334	# OUTPUT-DATEI NICHT VORHANDEN. PRUEFEN, OB ANLEGEN MOEGLICH.
1335	if cat /dev/null > $filename
1336	then
1337	rm $filename
1338	else
1339
1340	# PRUEFEN, OB KATALOG VORHANDEN UND EVTL. DIESEN ANLEGEN
1341	if [[ ! -d $catalogname ]]
1342	then
1343	if mkdir -p $catalogname
1344	then
1345	printf "\n\n *** directory:"
1346	printf "\n $catalogname"
1347	printf "\n was created\n"
1348	else
1349	printf "\n\n +++ OUTPUT-file:"
1350	printf "\n $filename"
1351	printf "\n cannot be created, because directory does not exist"
1352	printf "\n and cannot be created either"
1353	printf "\n"
1354	locat=output ; exit
1355	fi 2>/dev/null
1356	else
1357	printf "\n\n +++ OUTPUT-file:"
1358	printf "\n $filename"
1359	printf "\n cannot be created, although directory exists"
1360	printf "\n"
1361	locat=output ; exit
1362	fi
1363	fi 2>/dev/null
1364	else
1365
1366	# ZYKLUSNUMMER FESTSTELLEN
1367	ls -1 -d $filename > filelist 2>/dev/null
1368	ls -1 -d $filename.* >> filelist 2>/dev/null
1369	while read zeile
1370	do
1371	cycle=$(print $zeile \| cut -f2 -d".")
1372	if [[ "$cycle" = "$zeile" \|\| "$cycle" = ${extout[$i]} ]]
1373	then
1374	(( icycle = 1 ))
1375	else
1376	(( icycle = $cycle + 1 ))
1377	fi
1378	if (( icycle > maxcycle ))
1379	then
1380	(( maxcycle = icycle ))
1381	fi
1382	done <filelist
1383	rm filelist
1384	fi
1385
1386	# EVTL. ZYKLUSNUMMER AN DATEINAMEN ANFUEGEN UND PRUEFEN, OB SICH
1387	# DATEI AUCH WIRKLICH ANLEGEN LAESST. IM APPEND-FALL MUSS AN DEN
1388	# HOECHSTEN VORHANDENEN ZYKLUS-ANGEHAENGT WERDEN. ANLAGEPRUEFUNG
1389	# IST DANN NATUERLICH NICHT ZULAESSIG BZW. MOEGLICH
1390	if [[ "${actionout[$i]}" != a ]]
1391	then
1392	if (( maxcycle > 0 ))
1393	then
1394	filename=${filename}.$maxcycle
1395	if cat /dev/null > $filename
1396	then
1397	rm $filename
1398	else
1399	printf "\n +++ OUTPUT-file:"
1400	printf "\n $filename"
1401	printf "\n cannot be created"
1402	locat=output ; exit
1403	fi
1404	fi
1405	else
1406	(( maxcycle = maxcycle - 1 ))
1407	if (( maxcycle > 0 ))
1408	then
1409	filename=${filename}.$maxcycle
1410	fi
1411	fi
1412
1413	# DATEINAMEN OHNE PFAD ABER MIT ZYKLUSNUMMER ABSPEICHERN,
1414	# DA SPAETER BEI ABLAGE AUF ARCHIVSYSTEM BZW. FUER
1415	# DATEI OUTPUT_FILE_CONNECTIONS EVTL. BENOETIGT
1416	pathout[$i]=$filename
1417	if (( maxcycle > 0 ))
1418	then
1419	frelout[$i]=${fname}${endout[$i]}.$maxcycle
1420	else
1421	frelout[$i]=${fname}${endout[$i]}
1422	fi
1423
1424	fi
1425	done
1426
1427
1428	# DAS DVRP-PAKET ERFORDERT EINE ENTSPRECHENDE BIBLIOTHEK
1429	if [[ $(echo $package_list \| grep -c dvrp_graphics) != 0 ]]
1430	then
1431	if [[ "$dvrp_inc" = "" ]]
1432	then
1433	printf "\n\n +++ no value for \"dvrp_inc\" given in configuration file"
1434	printf "\n This is required for the dvrp_graphics package.\n"
1435	locat=dvrp; exit
1436	fi
1437	if [[ "$dvrp_lib" = "" ]]
1438	then
1439	printf "\n\n +++ no value for \"dvrp_lib\" given in configuration file"
1440	printf "\n This is required for the dvrp_graphics package.\n"
1441	locat=dvrp; exit
1442	fi
1443	fi
1444
1445
1446	# PRUEFEN, OB ENTWEDER HAUPTPROGRAMM ODER NUR EIN AUSFUEHRBARES
1447	# PROGRAMM VEREINBART WURDE (IN DIESEM FALL BRAUCHT IM WEITEREN NICHT
1448	# UEBERSETZT ZU WERDEN)
1449	if [[ "$mainprog" = "" && "$executable" = "" ]]
1450	then
1451	printf "\n +++ neither main program nor executable defined"
1452	locat=source; exit
1453	elif [[ "$mainprog" != "" && "$executable" != "" ]]
1454	then
1455	printf "\n +++ main program as well as executable defined"
1456	locat=source; exit
1457	elif [[ "$mainprog" = "" && "$executable" != "" ]]
1458	then
1459	do_compile=false
1460	fi
1461
1462
1463	# SOURCE-VERZEICHNIS ZUM AUFSAMMELN DER ZU UEBERSETZENDEN PROGRAMMTEILE
1464	# ERZEUGEN. HIERHIN WERDEN SPAETER IM FALL VON BATCH-JOBS AUCH DAS MRUN-
1465	# SCRIPTS SOWIE DIE KONFIGURATIONSDATEI KOPIERT
1466	if [[ $restart_run != true && "$SOURCES_COMPLETE" = "" ]]
1467	then
1468	rm -rf SOURCES_FOR_RUN_$fname
1469	mkdir SOURCES_FOR_RUN_$fname
1470	fi
1471
1472
1473	# ALLE ZU UEBERSETZENDEN PROGRAMMTEILE ZUSAMMENSAMMELN
1474	# BEI BATCH-JOBS IST DIES NICHT NOETIG, WEIL DIE PROGRAMMTEILE BEREITS DURCH
1475	# DEN MRUN-AUFRUF ERMITTELT SIND, DER DEN BATCH-JOB GENERIERT HAT, UND
1476	# IM VERZEICHNIS SOURCES_FOR_RUN_... ABGELEGT SIND
1477	if [[ $do_compile = true && "$SOURCES_COMPLETE" = "" ]]
1478	then
1479
1480	[[ "$source_list" = LM ]] && source_list=LOCALLY_MODIFIED
1481	[[ "$source_list" = WP ]] && source_list=WRITE_PERMIT
1482
1483
1484	# EVTL. ZU UEBERSETZENDE PROGRAMMTEILE DADURCH BESTIMMEN, DASS GEPRUEFT
1485	# WIRD, WELCHE DATEIEN WRITE-PERMIT BESITZEN (DATEIEN SOLLTEN DESHALB
1486	# UNTER RCS-KONTROLLE STEHEN). MIT DER VARIABLEN EXCLUDE KOENNEN
1487	# BESTIMMTE DATEIEN GRUNDSAETZLICH VON DER UEBERSETZUNG AUSGESCHLOSSEN
1488	# WERDEN. DIES IST NUR BEI MANUELLEM START VON MRUN DURCH DEN BENUTZER
1489	# MOEGLICH, DA BEI AUTOMATISCHEN RESTARTS TEST DURCH DIE TATSAECHLICH
1490	# ZU UBERSETZENDEN DATEIEN ERSETZT IST.
1491	# ALLE ERMITTELTEN DATEIEN WERDEN IM VERZEICHNIS SOURCES_FOR_RUN_...
1492	# GESAMMELT
1493	if [[ "$source_list" = WRITE_PERMIT ]]
1494	then
1495
1496	source_list=""
1497	cd $source_path
1498
1499
1500	# ALLE MOEGLICHEN QUELLCODEDATEIEN AUFLISTEN
1501	Names=$(ls -1 *.f90 2>&1)
1502	[[ $(echo $Names \| grep -c '*.f90') = 0 ]] && Filenames="$Names"
1503	Names=$(ls -1 *.F90 2>&1)
1504	[[ $(echo $Names \| grep -c '*.F90') = 0 ]] && Filenames="$Filenames $Names"
1505	Names=$(ls -1 *.F 2>&1)
1506	[[ $(echo $Names \| grep -c '*.F') = 0 ]] && Filenames="$Filenames $Names"
1507	Names=$(ls -1 *.f 2>&1)
1508	[[ $(echo $Names \| grep -c '*.f') = 0 ]] && Filenames="$Filenames $Names"
1509	Names=$(ls -1 *.c 2>&1)
1510	[[ $(echo $Names \| grep -c '*.c') = 0 ]] && Filenames="$Filenames $Names"
1511
1512
1513	# DATEIEN MIT WRITE-PERMIT NACH SOURCES_FOR_RUN_... KOPIEREN
1514	for dateiname in $Filenames
1515	do
1516	if [[ -w $dateiname ]]
1517	then
1518	if [[ "$exclude" = "" \|\| $(echo $exclude \| grep -c $dateiname) = 0 ]]
1519	then
1520	cp $dateiname $working_directory/SOURCES_FOR_RUN_$fname
1521	source_list=$source_list"$dateiname "
1522	fi
1523	fi
1524	done
1525
1526	cd - > /dev/null
1527
1528
1529	elif [[ "$source_list" = LOCALLY_MODIFIED ]]
1530	then
1531
1532	# MODIFIZIERTE DATEIEN DER SVN-ARBEITSKOPIE BESTIMMEN
1533	source_list=""
1534	cd $source_path
1535
1536
1537	# PRUEFEN, OB VERZEICHNIS UEBERHAUPT UNTER SVN-KONTROLLE STEHT
1538	if [[ ! -d .svn ]]
1539	then
1540	printf "\n\n +++ source directory"
1541	printf "\n \"$source_path\" "
1542	printf "\n is not under control of \"subversion\"."
1543	printf "\n Please do not use mrun-option \"-s LOCALLY MODIFIED\"\n"
1544	fi
1545
1546
1547	# ALLE MODIFIZIERTEN QUELLCODEDATEIEN AUFLISTEN
1548	Filenames=""
1549	svn status > tmp_mrun
1550	while read line
1551	do
1552	firstc=`echo $line \| cut -c1`
1553	if [[ $firstc = M \|\| $firstc = "?" ]]
1554	then
1555	Name=`echo "$line" \| cut -c8-`
1556	extension=`echo $Name \| cut -d. -f2`
1557	if [[ "$extension" = f90 \|\| "$extension" = F90 \|\| "$extension" = f \|\| "$extension" = F \|\| "$extension" = c ]]
1558	then
1559	Filenames="$Filenames "$Name
1560	fi
1561	fi
1562	done < tmp_mrun
1563
1564
1565	# DATEIEN NACH SOURCES_FOR_RUN_... KOPIEREN
1566	for dateiname in $Filenames
1567	do
1568	cp $dateiname $working_directory/SOURCES_FOR_RUN_$fname
1569	source_list=$source_list"$dateiname "
1570	done
1571
1572	cd - > /dev/null
1573
1574
1575	# MITTELS OPTION -s ANGEGEBENE DATEIEN NACH SOURCES_FOR_RUN_... KOPIEREN
1576	# BEI AUTOMATISCHEN FORTSETZUNGSLAEUFEN SIND DORT SCHON ALLE DATEIEN
1577	# VORHANDEN
1578	elif [[ "$source_list" != "" && $restart_run != true ]]
1579	then
1580
1581	cd $source_path
1582
1583	for filename in $source_list
1584	do
1585
1586	# QUELLTEXT-DATEI DARF KEINE PFADE BEINHALTEN
1587	if [[ $(print $filename \| grep -c "/") != 0 ]]
1588	then
1589	printf "\n +++ source code file: $filename"
1590	printf "\n must not contain (\"/\") "
1591	locat=source; exit
1592	fi
1593
1594	if [[ ! -f $filename ]]
1595	then
1596	printf "\n +++ source code file: $filename"
1597	printf "\n does not exist"
1598	locat=source; exit
1599	else
1600	cp $filename $working_directory/SOURCES_FOR_RUN_$fname
1601	fi
1602
1603	done
1604
1605	cd - > /dev/null
1606
1607	fi
1608
1609
1610	# PRUEFEN, OB ENTWEDER HAUPTPROGRAMM VORHANDEN UND ES EVTL. IN DER
1611	# LISTE DER ZU UEBERSETZENDEN PROGRAMMTEILE MIT ENTHALTEN IST (WENN
1612	# NICHT, WIRD ES DIESER LISTE HINZUGEFUEGT)
1613	if [[ $restart_run != true ]]
1614	then
1615
1616	if [[ ! -f "$source_path/$mainprog" ]]
1617	then
1618	printf "\n\n +++ main program: $mainprog"
1619	printf "\n does not exist in source directory"
1620	printf "\n \"$source_path\"\n"
1621	locat=source; exit
1622	else
1623	if [[ $(echo $source_list \| grep -c $mainprog) = 0 ]]
1624	then
1625	cp $source_path/$mainprog SOURCES_FOR_RUN_$fname
1626	source_list=${mainprog}" $source_list"
1627	fi
1628	fi
1629	fi
1630
1631
1632	# MAKEFILE AUF VORHANDENSEIN PRUEFEN UND KOPIEREN
1633	# BEI RESTART-LAEUFEN LIEGT ES SCHON IM VERZEICHNIS SOURCES_FOR_RUN...
1634	if [[ "$restart_run" != true ]]
1635	then
1636	[[ "$makefile" = "" ]] && makefile=$source_path/Makefile
1637	if [[ ! -f $makefile ]]
1638	then
1639	printf "\n +++ file \"$makefile\" does not exist"
1640	locat=make; exit
1641	else
1642	cp $makefile SOURCES_FOR_RUN_$fname/Makefile
1643	fi
1644	fi
1645
1646
1647	# DATEIEN AUS ZUSAETZLICHEM QUELLVERZEICHNIS HINZUFUEGEN
1648	if [[ $restart_run != true && "$add_source_path" != "" ]]
1649	then
1650
1651	# GIBT ES DAS VERZEICHNIS UEBERHAUPT?
1652	if [[ ! -d $add_source_path ]]
1653	then
1654	printf "\n\n +++ WARNING: additional source code directory"
1655	printf "\n \"$add_source_path\" "
1656	printf "\n does not exist or is not a directory."
1657	printf "\n No source code will be used from this directory!\n"
1658	add_source_path=""
1659	sleep 3
1660	else
1661
1662	cd $add_source_path
1663	found=false
1664
1665	Names=$(ls -1 *.f90 2>&1)
1666	[[ $(echo $Names \| grep -c '*.f90') = 0 ]] && AddFilenames="$Names"
1667	Names=$(ls -1 *.F90 2>&1)
1668	[[ $(echo $Names \| grep -c '*.F90') = 0 ]] && AddFilenames="$AddFilenames $Names"
1669	Names=$(ls -1 *.F 2>&1)
1670	[[ $(echo $Names \| grep -c '*.F') = 0 ]] && AddFilenames="$AddFilenames $Names"
1671	Names=$(ls -1 *.f 2>&1)
1672	[[ $(echo $Names \| grep -c '*.f') = 0 ]] && AddFilenames="$AddFilenames $Names"
1673	Names=$(ls -1 *.c 2>&1)
1674	[[ $(echo $Names \| grep -c '*.c') = 0 ]] && AddFilenames="$AddFilenames $Names"
1675
1676	cd - > /dev/null
1677	cd SOURCES_FOR_RUN_$fname
1678
1679	# COPY MAKEFILE IF EXISTING
1680	if [[ -f $add_source_path/Makefile ]]
1681	then
1682	printf "\n\n *** user Makefile from directory"
1683	printf "\n \"$add_source_path\" is used \n"
1684	sleep 1
1685	cp $add_source_path/Makefile .
1686	fi
1687
1688	for dateiname in $AddFilenames
1689	do
1690	if [[ -f $dateiname ]]
1691	then
1692	printf "\n +++ source code file \"$dateiname\" found in additional"
1693	printf "\n source code directory \"$add_source_path\" "
1694	printf "\n but was also given with option \"-s\" which means that it should be taken"
1695	printf "\n from directory \"$source_path\"."
1696	locat=source; exit
1697	fi
1698
1699	cp $add_source_path/$dateiname .
1700	source_list="$source_list $dateiname"
1701
1702	# CHECK IF FILE IS CONTAINED IN MAKEFILE
1703	if [[ $(grep -c $dateiname Makefile) = 0 ]]
1704	then
1705	printf "\n\n +++ user file \"$dateiname\" "
1706	printf "\n is not listed in Makefile \n"
1707	locat=source; exit
1708	else
1709
1710	# Default User-Interface von der Liste entfernen, falls Datei
1711	# ein User-Interface enthaelt
1712	# if [[ $( cat $dateiname \| grep -c "END SUBROUTINE user_parin" ) != 0 ]]
1713	# then
1714	# if [[ $dateiname != user_interface.f90 && -f user_interface.f90 ]]
1715	# then
1716	# rm -rf user_interface.f90
1717	# source_list=`echo $source_list \| sed -e 's/user_interface.f90//'`
1718	# printf "\n\n *** default \"user_interface.f90\" removed from the files to be translated"
1719	# printf "\n since a user-interface is found in file"
1720	# printf "\n \"$add_source_path/$dateiname\" \n"
1721	# sleep 3
1722	# else
1723	if [[ $found = false ]]
1724	then
1725	found=true
1726	printf "\n\n *** following user file(s) added to the"
1727	printf " files to be translated:\n "
1728	fi
1729	printf "$dateiname "
1730	sleep 0.5
1731	fi
1732	done
1733	[[ $found = true ]] && printf "\n"
1734	cd - > /dev/null
1735	fi
1736	fi
1737
1738
1739	# ALLE UNTERPROGRAMME, DIE ZU VEREINBARTEN SOFTWAREPAKETEN GEHOEREN,
1740	# DER LISTE DER ZU UEBERSETZENDEN DATEIEN HINZUFUEGEN
1741	if [[ $restart_run != true && -n $package_list ]]
1742	then
1743
1744	cd $source_path
1745
1746	for package in $package_list
1747	do
1748
1749	[[ $package = "dvrp_graphics+1PE" ]] && package=dvrp_graphics
1750
1751	# ERMITTELE ALLE DATEIEN, DIE ZUM PAKET GEHOEREN
1752	# FEHLERMELDUNGEN WERDEN ABGEFANGEN, DA * AUCH VERZEICHNISSNAMEN
1753	# LIEFERT
1754	package_source_list=`grep "defined( __$package " * 2>/dev/null \| cut -f1 -d:`
1755
1756
1757	# FUEGE DIESE DATEIEN DER LISTE DER ZU UEBERSETZENDEN DATEIEN
1758	# HINZU, FALLS SIE NOCH NICHT DAZUGEHOEREN
1759	for source_list_name in $package_source_list
1760	do
1761	if [[ $(echo $source_list \| grep -c $source_list_name) = 0 ]]
1762	then
1763
1764	# NUR DATEIEN MIT GUELTIGEN ENDUNGEN VERWENDEN
1765	ending=`echo $source_list_name \| cut -f2 -d.`
1766	if [[ "$ending" = f90 \|\| "$ending" = F90 \|\| "$ending" = f \|\| "$ending" = F \|\| "$ending" = c ]]
1767	then
1768	cp $source_list_name $working_directory/SOURCES_FOR_RUN_$fname
1769	source_list="$source_list $source_list_name"
1770	fi
1771	fi
1772	done
1773	done
1774
1775	cd - > /dev/null
1776	fi
1777
1778
1779	# MAKEFILE AUF VORHANDENSEIN PRUEFEN UND KOPIEREN
1780	# BEI RESTART-LAEUFEN LIEGT ES SCHON IM VERZEICHNIS SOURCES_FOR_RUN...
1781	# if [[ "$restart_run" != true ]]
1782	# then
1783	# [[ "$makefile" = "" ]] && makefile=$source_path/Makefile
1784	# if [[ ! -f $makefile ]]
1785	# then
1786	# printf "\n +++ file \"$makefile\" does not exist"
1787	# locat=make; exit
1788	# else
1789	# cp $makefile SOURCES_FOR_RUN_$fname/Makefile
1790	# fi
1791	# fi
1792
1793	fi # do_compile=true
1794
1795
1796	# FALLS PROGRAMMTEILE UEBERSETZT WERDEN SOLLEN, FOLGEN JETZT EINIGE
1797	# UEBERPRUEFUNGEN UND DAS SETZEN DER PRAEPROZESSOR-DIREKTIVEN
1798	if [[ $do_compile = true ]]
1799	then
1800
1801	# PRAEPROZESSOR-DIREKTIVEN ZUM SELEKTIVEN AUSWAEHLEN VON CODETEILEN
1802	# ZUSAMMENSETZEN
1803	# DIREKTIVEN ZUM AKTIVIEREN VON RECHNERSPEZIFISCHEM CODE
1804	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1805	then
1806	cpp_options="${cpp_options},-D__ibm=__ibm"
1807	elif [[ $(echo $localhost \| cut -c1-3) = nec ]]
1808	then
1809	cpp_options="$cpp_options -D__nec"
1810	elif [[ $(echo $localhost \| cut -c1-2) = lc ]]
1811	then
1812	cpp_options="$cpp_options -D__lc"
1813	else
1814	cpp_options="$cpp_options -D__$localhost"
1815	fi
1816
1817	# DIREKTIVEN DIE DURCH OPTION -K BESTIMMT WERDEN (Z.B. PARALLEL)
1818	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1819	then
1820	[[ -n $cond1 ]] && cpp_options="${cpp_options},-D__$cond1=__$cond1"
1821	[[ -n $cond2 ]] && cpp_options="${cpp_options},-D__$cond2=__$cond2"
1822	else
1823	[[ -n $cond1 ]] && cpp_options="$cpp_options -D__$cond1"
1824	[[ -n $cond2 ]] && cpp_options="$cpp_options -D__$cond2"
1825	fi
1826
1827	# DIREKTIVEN DIE SOFTWAREPAKETE AKTIVIEREN (OPTION -p)
1828	if [[ -n $package_list ]]
1829	then
1830	for package in $package_list
1831	do
1832	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1833	then
1834	if [[ $package != "dvrp_graphics+1PE" ]]
1835	then
1836	cpp_options="${cpp_options},-D__$package=__$package"
1837	else
1838	cpp_options="${cpp_options},-D__dvrp_graphics=__dvrp_graphics"
1839	export use_seperate_pe_for_dvrp_output=true
1840	fi
1841	else
1842	if [[ $package != "dvrp_graphics+1PE" ]]
1843	then
1844	cpp_options="$cpp_options -D__$package"
1845	else
1846	cpp_options="$cpp_options -D__dvrp_graphics"
1847	export use_seperate_pe_for_dvrp_output=true
1848	fi
1849	fi
1850	done
1851	fi
1852
1853	# DIREKTIVEN DIE DURCH OPTION -D FESTGELEGT SIND
1854	if [[ -n $cpp_opts ]]
1855	then
1856	for popts in $cpp_opts
1857	do
1858	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1859	then
1860	cpp_options="${cpp_options},-D__$popts=__$popts"
1861	else
1862	cpp_options="$cpp_options -D__$popts"
1863	fi
1864	done
1865	fi
1866
1867	else
1868
1869
1870	# BEI LOKALEN RECHNUNGEN PRUEFEN, OB EXECUTABLE VORHANDEN
1871	if [[ $do_remote = false ]]
1872	then
1873	if [[ ! -f $executable ]]
1874	then
1875	printf "\n +++ executable file: $executable"
1876	printf "\n does not exist"
1877	locat=executable; exit
1878	fi
1879	fi
1880	fi
1881
1882
1883	# JOBMODUS FESTSTELLEN
1884	if [[ "$ENVIRONMENT" = BATCH && $localhost != lctit \|\| "$QUEUE" != interactive && $localhost = lctit ]]
1885	then
1886	jobmo=BATCH
1887	else
1888	jobmo=INTERACTIVE
1889	fi
1890
1891
1892	# HOSTSPEZIFISCHE DEFAULT-COMPILER SETZEN, FALLS NICHT BEREITS
1893	# DURCH BENUTZER ANDERWEITIG VEREINBART
1894	if [[ "$compiler_name" = "" ]]
1895	then
1896
1897	printf "\n +++ no compiler specified for \"$localhost $cond1 $cond2\""
1898	locat=compiler_name; exit
1899
1900	fi
1901
1902
1903	# COMPILER AUF NECK UEBERSCHREIBEN
1904	[[ $localhost = neck ]] && compiler_name=mpif90
1905
1906
1907
1908	# TEMPORAEREN KATALOGNAMEN BESTIMMEN
1909	kennung=$RANDOM
1910	if [[ "$tmp_user_catalog" = "" ]]
1911	then
1912	if [[ $localhost = ibmb \|\| $localhost = ibmh ]]
1913	then
1914	tmp_user_catalog=$TMPDIR
1915	elif [[ $localhost = nech ]]
1916	then
1917	tmp_user_catalog=$WRKSHR
1918	else
1919	tmp_user_catalog=/tmp
1920	fi
1921	fi
1922	TEMPDIR=$tmp_user_catalog/${usern}.$kennung
1923
1924
1925	# KATALOGNAMEN FUER ZWISCHENSPEICHERUNG VON FORTSETZUNGSLAUFDATEIEN
1926	# BESTIMMEN
1927	if [[ "$tmp_data_catalog" = "" ]]
1928	then
1929	if [[ $localhost = ibmb \|\| $localhost = ibmh ]]
1930	then
1931	tmp_data_catalog=$WORK/mrun_restart_data
1932	elif [[ $localhost = nech ]]
1933	then
1934	tmp_data_catalog=$WRKSHR/mrun_restart_data
1935	else
1936	tmp_data_catalog=/tmp/mrun_restart_data
1937	fi
1938	fi
1939
1940
1941	# EVENTUELL BEI LOKALEN RECHNUNGEN $-ZEICHEN IN ENVIRONMENT-VARIABLEN
1942	# ERSETZEN
1943	if [[ $do_remote = false && $do_compile = true ]]
1944	then
1945	eval fopts=\"$fopts\"
1946	eval lopts=\"$lopts\"
1947	fi
1948
1949
1950
1951	# COMPILE- UND LINK-OPTIONEN BESTIMMEN
1952	fopts="$fopts $netcdf_inc $dvrp_inc"
1953	lopts="$lopts $netcdf_lib $dvrp_lib"
1954	ROPTS="$ropts"
1955	if [[ ( $(echo $host \| cut -c1-3) = nec \|\| $(echo $host \| cut -c1-3) = ibm \|\| $host = lcsgih \|\| $host = lcsgib \|\| $host = lctit \|\| $host = lcfimm \|\| $host = lcxt4 ) && -n $numprocs ]]
1956	then
1957	XOPT="-X $numprocs"
1958	fi
1959
1960
1961
1962	# PRUEFEN DER CPU-ZEIT. (CPUMAX WIRD ALS ENV-VARIABLE VOM HAUTPRO-
1963	# GRAMM BENOETIGT
1964	done=false
1965	while [[ $done = false ]]
1966	do
1967	cputime=$cpumax
1968	if (( $cputime == 0 ))
1969	then
1970	printf "\n +++ cpu-time is undefined"
1971	printf "\n >>> Please type CPU-time in seconds as INTEGER:"
1972	printf "\n >>> "
1973	read cputime 1>/dev/null 2>&1
1974	else
1975	done=true
1976	fi
1977	cpumax=$cputime
1978	done
1979
1980	(( minuten = cputime / 60 ))
1981	(( sekunden = cputime - minuten * 60 ))
1982
1983
1984	# PRUEFEN DER KERNSPEICHERANFORDERUNG
1985	if [[ $do_batch = true ]]
1986	then
1987	done=false
1988	while [[ $done = false ]]
1989	do
1990	if (( memory == 0 ))
1991	then
1992	printf "\n +++ memory demand is undefined"
1993	printf "\n >>> Please type memory in MByte per process as INTEGER:"
1994	printf "\n >>> "
1995	read memory 1>/dev/null 2>&1
1996	else
1997	done=true
1998	fi
1999	done
2000	fi
2001
2002
2003	# PRUEFEN, OB FUER REMOTE-RECHNUNGEN EIN BENUTZERNAME ANGEGEBEN WURDE
2004	if [[ $do_remote = true && -z $remote_username ]]
2005	then
2006	while [[ -z $remote_username ]]
2007	do
2008	printf "\n +++ username on remote host \"$host\" is undefined"
2009	printf "\n >>> Please type username:"
2010	printf "\n >>> "
2011	read remote_username
2012	done
2013	mc="$mc -u$remote_username"
2014	fi
2015
2016	###########################################################################
2017	# HEADER-AUSGABE
2018	###########################################################################
2019
2020
2021	calltime=$(date)
2022	printf "\n"
2023	# [[ $silent = false ]] && clear
2024	printf "#--------------------------------------------------------------# \n"
2025	printf "\| $version$calltime \| \n"
2026	printf "\| \| \n"
2027	spalte1="called on:"; spalte2=$localhost_realname
2028	printf "\| $spalte1$spalte2 \| \n"
2029	if [[ $local_compile = false ]]
2030	then
2031	if [[ $do_remote = true ]]
2032	then
2033	spalte1="execution on:"; spalte2="$host (username: $remote_username)"
2034	else
2035	spalte1="execution on:"; spalte2="$host ($localhost_realname)"
2036	fi
2037	else
2038	spalte1="compiling test only!"; spalte2=""
2039	fi
2040	printf "\| $spalte1$spalte2 \| \n"
2041	if [[ -n $numprocs ]]
2042	then
2043	spalte1="number of PEs:"; spalte2=$numprocs
2044	printf "\| $spalte1$spalte2 \| \n"
2045	fi
2046	if [[ -n $tasks_per_node ]]
2047	then
2048	spalte1="tasks per node:"; spalte2="$tasks_per_node (number of nodes: $nodes)"
2049	printf "\| $spalte1$spalte2 \| \n"
2050	fi
2051	if [[ $threads_per_task != 1 ]]
2052	then
2053	spalte1="threads per task:"; spalte2="$threads_per_task"
2054	printf "\| $spalte1$spalte2 \| \n"
2055	fi
2056	printf "\| \| \n"
2057	if [[ $do_compile = true ]]
2058	then
2059	spalte1=cpp-directives:; spalte2=$cpp_options
2060	printf "\| $spalte1$spalte2 \| \n"
2061	zeile=$(echo "$cpp_options" \| cut -c41-)
2062	while [[ "$zeile" != "" ]]
2063	do
2064	spalte1=""
2065	spalte2=$zeile
2066	printf "\| $spalte1$spalte2 \| \n"
2067	zeile=$(echo "$zeile" \| cut -c41-)
2068	done
2069
2070	spalte1=compiler-options:; spalte2="$fopts"
2071	printf "\| $spalte1$spalte2 \| \n"
2072	zeile=$(echo "$fopts" \| cut -c41-)
2073	while [[ "$zeile" != "" ]]
2074	do
2075	spalte1=""
2076	spalte2=$zeile
2077	printf "\| $spalte1$spalte2 \| \n"
2078	zeile=$(echo "$zeile" \| cut -c41-)
2079	done
2080
2081	spalte1=linker-options:; spalte2=$lopts
2082	printf "\| $spalte1$spalte2 \| \n"
2083	zeile=$(echo "$lopts" \| cut -c41-)
2084	while [[ "$zeile" != "" ]]
2085	do
2086	spalte1=""
2087	spalte2=$zeile
2088	printf "\| $spalte1$spalte2 \| \n"
2089	zeile=$(echo "$zeile" \| cut -c41-)
2090	done
2091
2092	spalte1="main program":; spalte2=$mainprog
2093	printf "\| $spalte1$spalte2 \| \n"
2094	else
2095	spalte1=executable:; spalte2=$executable
2096	printf "\| $spalte1$spalte2 \| \n"
2097	fi
2098	printf "\| \| \n"
2099	spalte1="base name of files":; spalte2=$fname
2100	printf "\| $spalte1$spalte2 \| \n"
2101	if [[ $fname != $afname ]]
2102	then
2103	spalte1="base name of input files":; spalte2=$afname
2104	printf "\| $spalte1$spalte2 \| \n"
2105	fi
2106	spalte1="INPUT control list":; spalte2=$input_list
2107	printf "\| $spalte1$spalte2 \| \n"
2108	spalte1="OUTPUT control list":; spalte2=$output_list
2109	printf "\| $spalte1$spalte2 \| \n"
2110
2111	if [[ $do_batch = true \|\| "$LOADLBATCH" = yes ]]
2112	then
2113	spalte1="memory demand / PE":; spalte2="$memory MB"
2114	printf "\| $spalte1$spalte2 \| \n"
2115	spalte1=CPU-time:; spalte2="$minuten:$sekunden"
2116	printf "\| $spalte1$spalte2 \| \n"
2117	fi
2118
2119	if [[ $do_compile = true ]]
2120	then
2121	printf "\| \| \n"
2122	printf "\| Files to be compiled: \| \n"
2123	zeile=$source_list
2124	while [[ "$zeile" != "" ]]
2125	do
2126	spalte3=$zeile
2127	printf "\| $spalte3 \| \n"
2128	zeile=$(echo "$zeile" \| cut -c61-)
2129	done
2130	fi
2131	printf "#--------------------------------------------------------------#"
2132
2133
2134
2135	# BEDINGTE AUSGABE DER DATEIVERBINDUNGEN
2136	if [[ $do_trace = true ]]
2137	then
2138	(( i = 0 ))
2139	while (( i < iin ))
2140	do
2141	(( i = i + 1 ))
2142	if (( i == 1 ))
2143	then
2144	printf "\n\n >>> INPUT-file assignments:\n"
2145	fi
2146	printf "\n ${localin[$i]} : ${absnamein[$i]}"
2147	done
2148	(( i = 0 ))
2149	while (( i < iout ))
2150	do
2151	(( i = i + 1 ))
2152	if (( i == 1 ))
2153	then
2154	printf "\n\n >>> OUTPUT-file assignments:\n"
2155	fi
2156	printf "\n ${localout[$i]} : ${pathout[$i]}"
2157	done
2158	(( i = 0 ))
2159	while (( i < iic ))
2160	do
2161	(( i = i + 1 ))
2162	if (( i == 1 ))
2163	then
2164	printf "\n\n >>> INPUT-commands:\n"
2165	fi
2166	printf "\n ${in_command[$i]}"
2167	done
2168	(( i = 0 ))
2169	while (( i < ioc ))
2170	do
2171	(( i = i + 1 ))
2172	if (( i == 1 ))
2173	then
2174	printf "\n\n >>> OUTPUT-commands:\n"
2175	fi
2176	printf "\n ${out_command[$i]}"
2177	done
2178	fi
2179
2180
2181	# ABFRAGEN BEI AUFRUF AUF LOKALER MASCHINE
2182	if [[ $remotecall = false && $silent = false && $jobmo != BATCH ]]
2183	then
2184	antwort=dummy
2185	printf "\n\n"
2186	while [[ "$antwort" != y && "$antwort" != Y && "$antwort" != n && "$antwort" != N ]]
2187	do
2188	printf " >>> everything o.k. (y/n) ? "
2189	read antwort
2190	done
2191	if [[ $antwort = n \|\| $antwort = N ]]
2192	then
2193	locat=user_abort; (( iec = 0 )); exit
2194	fi
2195	if [[ $do_batch = true ]]
2196	then
2197	printf " >>> batch-job will be created and submitted"
2198	else
2199	if [[ $local_compile = false ]]
2200	then
2201	printf " >>> MRUN will now continue to execute on this machine"
2202	else
2203	printf " >>> a test compilation will now be carried out on this machine"
2204	fi
2205	fi
2206	fi
2207
2208
2209
2210
2211	# FALLS AUF DIESER MASCHINE GERECHNET WERDEN SOLL, WERDEN JETZT ENTSPRE-
2212	# CHENDE AKTIONEN DURCHGEFUEHRT
2213	if [[ $do_batch = false ]]
2214	then
2215
2216
2217	# TEMPORAEREN KATALOG ERZEUGEN
2218	mkdir -p $TEMPDIR
2219	chmod go+rx $TEMPDIR
2220	tmpcreate=true
2221
2222
2223	# SAEMTLICHE QUELLTEXT-DATEIEN BZW. AUSFUEHRBARES PROGRAMM IN
2224	# TEMPORAERES VERZEICHNIS KOPIEREN
2225	if [[ $do_compile = true ]]
2226	then
2227
2228	# ON NEC, COMPILATION IS DONE ON HOST CROSS VIA CROSS COMPILING
2229	# CREATE A TEMPORARY DIRECTORY ON THAT MACHINE (HOME MOUNTED VIA NFS)
2230	if [[ $localhost = nech ]]
2231	then
2232	TEMPDIR_COMPILE=$HOME/work/${usern}.$kennung
2233	if mkdir -p $TEMPDIR_COMPILE
2234	then
2235	printf "\n *** \"$TEMPDIR_COMPILE\" "
2236	printf "\n is generated as temporary directory for cross compiling\n"
2237	else
2238	printf "\n +++ creating directory \"$TEMPDIR_COMPILE\" "
2239	printf "\n needed for cross compilation failed"
2240	locat=compile
2241	exit
2242	fi
2243	else
2244	TEMPDIR_COMPILE=$TEMPDIR
2245	fi
2246
2247
2248	# PFADNAMEN FUER DAS MAKE-DEPOSITORY ERMITTELN
2249	line=""
2250	grep "%depository_path" $config_file > tmp_mrun
2251	while read line
2252	do
2253	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
2254	then
2255	if [[ "$(echo $line \| cut -d" " -s -f3)" = "" ]]
2256	then
2257	global_depository_path=`echo $line \| cut -d" " -s -f2`
2258	fi
2259	fi
2260	done < tmp_mrun
2261
2262	line=""
2263	grep " $localhost" $config_file \| grep "%depository_path" > tmp_mrun
2264	while read line
2265	do
2266	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
2267	then
2268	if [[ "$(echo $line \| cut -d" " -s -f4)" = "$cond1" && "$(echo $line \| cut -d" " -s -f5)" = "$cond2" ]]
2269	then
2270	local_depository_path=`echo $line \| cut -d" " -s -f2`
2271	fi
2272	fi
2273	done < tmp_mrun
2274
2275	if [[ "$local_depository_path" = "" ]]
2276	then
2277	if [[ "$global_depository_path" != "" ]]
2278	then
2279	local_depository_path=$global_depository_path
2280	else
2281	printf "\n\n +++ no depository path found in configuration file"
2282	printf "\n for local host \"$localhost\" "
2283	printf "\n please set \"\%depository_path\" in configuration file\n"
2284	locat=config_file; exit
2285	fi
2286	fi
2287	eval local_depository_path=$local_depository_path
2288
2289	basename=`print $mainprog \| cut -f1 -d"."`
2290	eval make_depository=${local_depository_path}/${basename}_current_version.tar
2291	if [[ ! -f $make_depository ]]
2292	then
2293	printf "\n"
2294	printf "\n *** WARNING: make depository \"$make_depository\" not found"
2295	printf "\n \"make\" will fail, if the Makefile or other source files are missing\n"
2296	else
2297	cp $make_depository $TEMPDIR_COMPILE
2298	cd $TEMPDIR_COMPILE
2299	tar -xf $make_depository > /dev/null 2>&1
2300	cd - > /dev/null
2301	fi
2302
2303	cp SOURCES_FOR_RUN_$fname/* $TEMPDIR_COMPILE
2304
2305	# FALLS USER-INTERFACE VORHANDEN UND AUF DATEI MIT ANDEREM NAMEN
2306	# ALS user_interface.f90 LIEGT, DIESEN GEAENDERTEN NAMEN INS
2307	# MAKEFILE EINTRAGEN
2308	# cd $TEMPDIR_COMPILE
2309	# interface_file=`grep -l "END SUBROUTINE user_parin" $source_list`
2310	# if [[ "$interface_file" != "" ]]
2311	# then
2312	# interface_file=`echo $interface_file \| cut -d"." -f1`
2313	# mv Makefile Makefile_old
2314	# sed "s/user_interface/$interface_file/g" Makefile_old > Makefile
2315	# fi
2316	# cd - > /dev/null
2317	else
2318	cp $executable ${TEMPDIR}/a.out
2319	fi
2320
2321
2322	# WECHSEL IN TEMPORAEREN KATALOG
2323	cd $TEMPDIR
2324	printf "\n *** changed to temporary directory: $TEMPDIR"
2325
2326
2327	# OUTPUT-DATEI-VERBINDUNGEN AUF TEMPORAERER DATEI ABLEGEN
2328	# DIESE DATEI KANN VON SPAETER AUFZURUFENDEN BENUTZERPROZEDUREN GELESEN
2329	# WERDEN, UM ZU LOKALEN DATEINAMEN GEHOERENDE PERMANENTE NAMEN ZU
2330	# ERMITTELN
2331	(( i = 0 ))
2332	while (( i < iout ))
2333	do
2334	(( i = i + 1 ))
2335	if [[ "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = tra \|\| "${actionout[$i]}" = trpe ]]
2336	then
2337	printf "${localout[$i]} ${actionout[$i]}\n${pathout[$i]}\n${localhost}_${fname}${endout[$i]}\n" >> OUTPUT_FILE_CONNECTIONS
2338	else
2339	printf "${localout[$i]} ${actionout[$i]}\n${pathout[$i]}\n${frelout[$i]}\n" >> OUTPUT_FILE_CONNECTIONS
2340	fi
2341	done
2342
2343
2344	# EVTL. UEBERSETZUNGSAKTIONEN STARTEN
2345	if [[ $do_compile = true ]]
2346	then
2347
2348
2349	# COMPILING WITH MAKE (ON NEC COMPILER IS CALLED ON HOST CROSS)
2350	printf "\n\n\n *** compilation starts \n$striche\n"
2351	printf " *** compilation with make using following options:\n"
2352	printf " make depository: $make_depository"
2353	printf " compilername: $compiler_name\n"
2354	printf " options: $fopts\n"
2355	printf " preprocessor-directives: $cpp_options \n"
2356	printf " linker-options: $lopts \n"
2357	printf " source code files: $source_list \n"
2358
2359	if [[ $localhost = nech ]]
2360	then
2361	ssh 136.172.44.192 -l $usern ". /SX/opt/etc/initsx.sh; cd \$HOME/work/${usern}.$kennung; sxmake -f Makefile PROG=a.out F90=$compiler_name COPT=\"$cpp_options\" F90FLAGS=\"$fopts\" LDFLAGS=\"$lopts\" "
2362	cp $TEMPDIR_COMPILE/a.out .
2363	[[ $? != 0 ]] && compile_error=true
2364	rm -rf $TEMPDIR_COMPILE
2365	elif [[ $localhost = lcsgib ]]
2366	then
2367	printf " compiler is called via ssh on \"bicegate\" \n"
2368	ssh 130.73.232.102 -l $usern ". /usr/share/modules/init/bash; module load mpt; cd $TEMPDIR; make -f Makefile PROG=a.out F90=$compiler_name COPT=\"$cpp_options\" F90FLAGS=\"$fopts\" LDFLAGS=\"$lopts\" "
2369	[[ ! -f a.out ]] && compile_error=true
2370	continue # ANDERENFALLS IST STATUS=1, FALLS A.OUT VORHANDEN
2371	elif [[ $localhost = lcsgih ]]
2372	then
2373	printf " compiler is called via ssh on \"hicegate\" \n"
2374	ssh 130.75.4.103 -l $usern ". /usr/share/modules/init/bash; module load mpt; cd $TEMPDIR; make -f Makefile PROG=a.out F90=$compiler_name COPT=\"$cpp_options\" F90FLAGS=\"$fopts\" LDFLAGS=\"$lopts\" 2>&1 "
2375	# ssh 130.75.4.102 -l $usern ". /usr/share/modules/init/bash; module load mvapich2; cd $TEMPDIR; make -f Makefile PROG=a.out F90=$compiler_name COPT=\"$cpp_options\" F90FLAGS=\"$fopts\" LDFLAGS=\"$lopts\" 2>&1 "
2376	# print ". /usr/share/modules/init/bash; module load mpt; cd $TEMPDIR; make -f Makefile PROG=a.out F90=$compiler_name COPT=\"$cpp_options\" F90FLAGS=\"$fopts\" LDFLAGS=\"$lopts\" " \| ssh ${usern}@130.75.4.102 2>&1
2377	[[ ! -f a.out ]] && compile_error=true
2378	continue # ANDERENFALLS IST STATUS=1, FALLS A.OUT VORHANDEN
2379	else
2380	[[ $localhost = lctit ]] && export LM_LICENSE_FILE=27050@tggls
2381	make -f Makefile PROG=a.out F90=$compiler_name COPT="$cpp_options" F90FLAGS="$fopts" LDFLAGS="$lopts"
2382	fi
2383
2384	if [[ $? != 0 \|\| "$compile_error" = true \|\| "$module_compile_error" = true ]]
2385	then
2386	printf "\n +++ error occured while compiling or linking"
2387	locat=compile
2388
2389	# WORKAROUND: REMOVE IF CONSTRUCT LATER, BUT KEEP THE EXIT!
2390	# if [[ $localhost != lcsgib && $localhost != lcsgih ]]
2391	# then
2392	exit
2393	# else
2394	# locat=normal
2395	# fi
2396	else
2397	printf "$striche\n *** compilation finished \n"
2398	fi
2399	fi
2400
2401
2402	# FALLS NUR TESTWEISE KOMPILIERT WERDEN SOLLTE, IST MRUN JETZT FERTIG
2403	if [[ $local_compile = true ]]
2404	then
2405	cd $HOME
2406	rm -rf $TEMPDIR
2407	locat=local_compile; exit
2408	fi
2409
2410
2411	# BEREITSTELLEN DER INPUT-DATEIEN
2412	# SCHLEIFE UEBER ALLE VOM BENUTZER ANGEGEBENEN DATEIEN
2413	(( i = 0 ))
2414	while (( i < iin ))
2415	do
2416	(( i = i + 1 ))
2417	if (( i == 1 ))
2418	then
2419	printf "\n\n *** providing INPUT-files:\n$striche"
2420	fi
2421
2422
2423	# OPTIONALE DATEIEN BEI NICHTVORHANDENSEIN UEBERGEHEN
2424	if [[ "${transin[$i]}" = unavailable ]]
2425	then
2426	if [[ "${extin[$i]}" = "" \|\| "${extin[$i]}" = " " ]]
2427	then
2428	printf "\n +++ WARNING: input file \"${pathin[$i]}/${afname}${endin[$i]}\" "
2429	printf "\n is not available!"
2430	else
2431	printf "\n +++ WARNING: input file \"${pathin[$i]}/${afname}${endin[$i]}.${extin[$i]}\" "
2432	printf "\n is not available!"
2433	fi
2434	continue
2435	fi
2436
2437	# PRUEFEN, OB EINZELDATEI ODER DATEI PRO PROZESSOR
2438	files_for_pes=false; datentyp=file
2439	if [[ "${actionin[$i]}" = pe && -n $numprocs ]]
2440	then
2441	files_for_pes=true; datentyp=directory
2442	actionin[$i]=""
2443	elif [[ "${actionin[$i]}" = pe && ! -n $numprocs ]]
2444	then
2445	actionin[$i]=""
2446	elif [[ "${actionin[$i]}" = arpe && -n $numprocs ]]
2447	then
2448	files_for_pes=true; datentyp=directory
2449	actionin[$i]="ar"
2450	elif [[ "${actionin[$i]}" = arpe && ! -n $numprocs ]]
2451	then
2452	actionin[$i]="ar"
2453	elif [[ "${actionin[$i]}" = flpe && -n $numprocs ]]
2454	then
2455	files_for_pes=true; datentyp=directory
2456	actionin[$i]="fl"
2457	elif [[ "${actionin[$i]}" = flpe && ! -n $numprocs ]]
2458	then
2459	actionin[$i]="fl"
2460	fi
2461
2462	if [[ $files_for_pes = true ]]
2463	then
2464	printf "\n >>> INPUT: ${absnamein[$i]}/.... to ${localin[$i]}"
2465	else
2466	printf "\n >>> INPUT: ${absnamein[$i]} to ${localin[$i]}"
2467	fi
2468
2469	# INPUT-DATEI FUER EINEN FORTSETZUNGSLAUF. ES WIRD GEPRUEFT,
2470	# OB DIESE DATEI NOCH AUF DEM TEMPORAEREN DATENKATALOG VORHANDEN
2471	# IST. FALLS NICHT, WIRD VERSUCHT, SIE ANSCHLIESSEND VOM ARCHIV-
2472	# SERVER ZU HOLEN
2473	if [[ "${actionin[$i]}" = fl ]]
2474	then
2475	printf "\n $datentyp will be fetched from temporary directory \"${tmp_data_catalog}\" !"
2476	if [[ $files_for_pes = false ]]
2477	then
2478	if [[ -f "$tmp_data_catalog/${frelin[$i]}" ]]
2479	then
2480	ln $tmp_data_catalog/${frelin[$i]} ${localin[$i]}
2481	got_tmp[$i]=true
2482	elif [[ -f "$WORK/${frelin[$i]}" && $ignore_archive_error = true ]]
2483	then
2484	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" !"
2485	printf "\n *** trying to use backup copy in \"$WORK\" "
2486	cp $WORK/${frelin[$i]} ${localin[$i]}
2487	else
2488	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" "
2489	printf "\n or \"$tmp_data_catalog\" does not exist!"
2490	printf "\n *** trying to get copy from archive"
2491	actionin[$i]=ar
2492	fi
2493	else
2494	if [[ -d "$tmp_data_catalog/${frelin[$i]}" ]]
2495	then
2496	mkdir ${localin[$i]}
2497	cd $tmp_data_catalog/${frelin[$i]}
2498	for file in $(ls *)
2499	do
2500	ln $file $TEMPDIR/${localin[$i]}
2501	done
2502	cd $TEMPDIR
2503	got_tmp[$i]=true
2504	elif [[ -d "$WORK/${frelin[$i]}" && $ignore_archive_error = true ]]
2505	then
2506	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" !"
2507	printf "\n *** trying to use backup copy in \"$WORK\" "
2508	cp -r $WORK/${frelin[$i]} ${localin[$i]}
2509	else
2510	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" "
2511	printf "\n or \"$tmp_data_catalog\" does not exist!"
2512	printf "\n *** trying to get copy from archive"
2513	actionin[$i]=ar
2514	fi
2515	fi
2516	fi
2517
2518
2519	# DATEI LIEGT AUF ARCHIV-SERVER
2520	if [[ "${actionin[$i]}" = ar ]]
2521	then
2522
2523	if [[ $files_for_pes = false ]]
2524	then
2525	printf "\n file will be restored from archive-system ($archive_system)!"
2526	else
2527	printf "\n directory will be restored from archive-system ($archive_system)!"
2528	fi
2529
2530	file_restored=false
2531
2532	if [[ $archive_system = asterix ]]
2533	then
2534	do_stagein=true
2535	(( stagein_anz = 0 ))
2536	while [[ $do_stagein = true ]]
2537	do
2538	if [[ $files_for_pes = false ]]
2539	then
2540	stagein -O ${frelin[$i]} > STAGEIN_OUTPUT
2541	else
2542	stagein -t -O ${frelin[$i]} > STAGEIN_OUTPUT
2543	fi
2544	cat STAGEIN_OUTPUT
2545	if [[ $(grep -c "st.msg:i24" STAGEIN_OUTPUT) != 0 ]]
2546	then
2547	file_restored=true
2548	do_stagein=false
2549	else
2550	(( stagein_anz = stagein_anz + 1 ))
2551	if (( stagein_anz == 10 ))
2552	then
2553	printf "\n +++ stagein stoped after 10 tries"
2554	locat=stage
2555	exit
2556	fi
2557	printf "\n +++ restoring from archive failed, trying again:"
2558	sleep 900
2559	fi
2560	done
2561	elif [[ $archive_system = DMF ]]
2562	then
2563	if [[ $files_for_pes = false ]]
2564	then
2565	printf "\n +++ restoring of single files impossible with $archive_system !\n"
2566	locat=DMF
2567	exit
2568	else
2569	find $ARCHIVE/${frelin[$i]} -type m -print \| dmget
2570	cp -r $ARCHIVE/${frelin[$i]} $PWD
2571	file_restored=true
2572	fi
2573	elif [[ $archive_system = tivoli ]]
2574	then
2575	if [[ $files_for_pes = false ]]
2576	then
2577	if [[ $localhost = ibmh ]]
2578	then
2579	ssh $usern@hdata.hlrn.de "cp $PERM/${frelin[$i]} $PWD"
2580	else
2581	ssh $usern@bdata.hlrn.de "cp $PERM/${frelin[$i]} $PWD"
2582	fi
2583	else
2584	(( inode = 0 ))
2585	while (( inode < nodes ))
2586	do
2587	if [[ $localhost = ibmh ]]
2588	then
2589	ssh $usern@hdata.hlrn.de "cd $PWD; tar xf $PERM/${frelin[$i]}/${frelin[$i]}.node_$inode.tar"
2590	else
2591	ssh $usern@bdata.hlrn.de "cd $PWD; tar xf $PERM/${frelin[$i]}/${frelin[$i]}.node_$inode.tar"
2592	fi
2593	(( inode = inode + 1 ))
2594	done
2595	fi
2596	file_restored=true
2597	elif [[ $archive_system = ut ]]
2598	then
2599	if [[ $files_for_pes = false ]]
2600	then
2601	cp $UT/${frelin[$i]} .
2602	else
2603	(( inode = 0 ))
2604	while (( inode < nodes ))
2605	do
2606	tar xf $UT/${frelin[$i]}/${frelin[$i]}.node_$inode.tar
2607	(( inode = inode + 1 ))
2608	done
2609	fi
2610	file_restored=true
2611	else
2612	printf "\n +++ archive_system=\"$archive_system\" restore impossible!"
2613	locat=rearchive
2614	exit
2615	fi
2616
2617	if [[ $file_restored = true ]]
2618	then
2619
2620	# DATEI AUCH AUF TEMPORAERES DATENVERZEICHNIS LEGEN, DAMIT
2621	# SIE BEI WEITEREN ZUGRIFFEN NOCH VORHANDEN IST
2622	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog; chmod g+rx $tmp_data_catalog
2623	if [[ $files_for_pes = false ]]
2624	then
2625	ln -f ${frelin[$i]} $tmp_data_catalog/${frelin[$i]}
2626	else
2627	mkdir $tmp_data_catalog/${frelin[$i]}
2628	ln -f ${frelin[$i]}/* $tmp_data_catalog/${frelin[$i]}
2629	fi
2630	got_tmp[$i]=true
2631
2632	# DATEI UNTER LOKALEM NAMEN ZUR VERFUEGUNG STELLEN
2633	mv ${frelin[$i]} ${localin[$i]}
2634
2635	fi
2636	fi
2637
2638
2639	# DATEI LIEGT IM VOM BENUTZER ANGEGEBENEN VERZEICHNIS
2640	if [[ "${actionin[$i]}" = "" \|\| "${actionin[$i]}" = "di" \|\| "${actionin[$i]}" = "npe" ]]
2641	then
2642
2643	if [[ "${actionin[$i]}" = "npe" && -n $numprocs ]]
2644	then
2645
2646	# DATEI WIRD FUER DIE PROZESSOREN EINES PARALLERECHNERS BEREITGESTELLT
2647	printf "\n file will be provided for $numprocs processors"
2648	mkdir ${localin[$i]}
2649	ival=$numprocs
2650	(( ii = 0 ))
2651	while (( ii <= ival-1 ))
2652	do
2653	if (( ii < 10 ))
2654	then
2655	cp ${absnamein[$i]} ${localin[$i]}/_000$ii
2656	elif (( ii < 100 ))
2657	then
2658	cp ${absnamein[$i]} ${localin[$i]}/_00$ii
2659	elif (( ii < 1000 ))
2660	then
2661	cp ${absnamein[$i]} ${localin[$i]}/_0$ii
2662	else
2663	cp ${absnamein[$i]} ${localin[$i]}/_$ii
2664	fi
2665	(( ii = ii + 1 ))
2666	done
2667
2668	else
2669
2670	if [[ $files_for_pes = true ]]
2671	then
2672
2673	# DIE DEN PROZESSOREN EINES PARALLELRECHNERS ZUGEHOERIGEN
2674	# DATEIEN WERDEN BEREITGESTELLT, INDEM ZUERST DER GESAMTE
2675	# KATALOGINHALT KOPIERT UND DANN DIE EINZELNEN DATEIEN
2676	# PER MOVE UMBENANNT WERDEN
2677	printf "\n providing $numprocs files for the respective processors"
2678	mkdir ${localin[$i]}
2679	if [[ $link_local_input = true ]]
2680	then
2681	printf " using ln -f\n"
2682	cd ${absnamein[$i]}
2683	for file in $(ls *)
2684	do
2685	ln -f $file ${localin[$i]}
2686	done
2687	cd $TEMPDIR
2688	fi
2689	# If "ln -f" fails of if "$link_local_input = false" do a normal "cp -r"
2690	if [[ ! -f "${localin[$i]}/_0000" ]]
2691	then
2692	if [[ $link_local_input = true ]]
2693	then
2694	printf " ln failed for .../_0000, using cp...\n"
2695	fi
2696	cp -r ${absnamein[$i]}/* ${localin[$i]}
2697	fi
2698
2699	else
2700	# BEREITSTELLUNG AUF EINPROZESSORRECHNERN
2701	if [[ $link_local_input = true ]]
2702	then
2703	printf " using ln -f\n"
2704	ln -f ${absnamein[$i]} ${localin[$i]}
2705	fi
2706	# If "ln -f" fails of if "$link_local_input = false" do a normal "cp"
2707	if [[ ! -f "${localin[$i]}" ]]
2708	then
2709	if [[ $link_local_input = true ]]
2710	then
2711	printf " ln failed, using cp...\n"
2712	fi
2713	cp ${absnamein[$i]} ${localin[$i]}
2714	fi
2715	fi
2716	fi
2717	fi
2718
2719	done
2720	if (( i != 0 ))
2721	then
2722	printf "\n$striche\n *** all INPUT-files provided \n"
2723	fi
2724
2725
2726	# NAMELIST-DATEI MIT WERTEN VON ENVIRONMENT-VARIABLEN ERZEUGEN (ZU
2727	# LESEN VON PALM)
2728	cat > ENVPAR << %%END%%
2729	&envpar run_identifier = '$fname', host = '$localhost',
2730	write_binary = '$write_binary', tasks_per_node = $tasks_per_node,
2731	maximum_cpu_time_allowed = ${cpumax}.,
2732	revision = '$global_revision' /
2733
2734	%%END%%
2735
2736
2737	# EVENTUELLE INPUT-KOMMANDOS ABARBEITEN
2738	(( i = 0 ))
2739	while (( i < iic ))
2740	do
2741	(( i = i + 1 ))
2742	if (( i == 1 ))
2743	then
2744	printf "\n\n *** execution of INPUT-commands:\n$striche"
2745	fi
2746	printf "\n >>> ${in_command[$i]}"
2747	eval ${in_command[$i]}
2748	if (( i == iic ))
2749	then
2750	printf "\n$striche\n"
2751	fi
2752	done
2753
2754
2755	# VERBLEIBENDE CPU-ZEIT BERECHNEN
2756	cpurest=${cpumax}.
2757
2758
2759	# PROGRAMMSTART
2760	printf "\n\n *** execution starts in directory\n \"`pwd`\"\n$striche\n"
2761	PATH=$PATH:$TEMPDIR
2762
2763	if [[ "$cond1" = debug \|\| "$cond2" = debug ]]
2764	then
2765	if [[ "$ENVIRONMENT" = BATCH ]]
2766	then
2767	if [[ $(echo $localhost \| cut -c1-5) != lcsgi ]]
2768	then
2769	printf "\n +++ debug is allowed in interactive mode only"
2770	locat=debug
2771	exit
2772	fi
2773	fi
2774	if [[ $localhost = decalpha ]]
2775	then
2776	dxladebug a.out
2777	elif [[ $localhost = ibmb \|\| $localhost = ibmh ]]
2778	then
2779
2780	# SETUP THE IBM MPI ENVIRONMENT
2781	export MP_SHARED_MEMORY=yes
2782	export AIXTHREADS_SCOPE=S
2783	export OMP_NUM_THREADS=$threads_per_task
2784	export AUTHSTATE=files
2785	export XLFRTEOPTS="nlwidth=132:err_recovery=no" # RECORD-LENGTH OF NAMELIST-OUTPUT
2786
2787	# FOLLOWING OPTIONS ARE MANDATORY FOR TOTALVIEW
2788	export MP_ADAPTER_USE=shared
2789	export MP_CPU_USE=multiple
2790	export MP_TIMEOUT=1200
2791
2792	unset MP_TASK_AFFINITY
2793
2794	# SO FAR, TOTALVIEW NEEDS HOSTFILE MECHANISM FOR EXECUTION
2795	#(( ii = 1 ))
2796	#while (( ii <= $numprocs ))
2797	#do
2798	# echo $localhost_realname >> hostfile
2799	# (( ii = ii + 1 ))
2800	#done
2801	#export MP_HOSTFILE=hostfile
2802
2803	if [[ "$LOADLBATCH" = yes ]]
2804	then
2805	totalview poe a.out $ROPTS
2806	else
2807	echo totalview poe -a a.out -procs $numprocs -rmpool 0 -nodes 1 $ROPTS
2808	export TVDSVRLAUNCHCMD=ssh
2809	totalview poe -a a.out -procs $numprocs -rmpool 0 -nodes 1 $ROPTS
2810	fi
2811	elif [[ $(echo $localhost \| cut -c1-5) = lcsgi ]]
2812	then
2813	# CURRENTLY NO DEBUGGER ON LCSGI
2814	if [[ $run_coupled_model = true ]]
2815	then
2816	printf "\n +++ no debug in coupled mode available on \"$localhost\" "
2817	locat=debug
2818	exit
2819	fi
2820	(( ii = $numprocs / $threads_per_task ))
2821	export OMP_NUM_THREADS=$threads_per_task
2822	echo "OMP_NUM_THREADS=$OMP_NUM_THREADS"
2823	if [[ $threads_per_task != 1 ]]
2824	then
2825	printf "\n threads per task: $threads_per_task"
2826	fi
2827	printf "\n\n"
2828	# ulimit -s 300000 # A too large stack size causes problems
2829	# export MV2_NUM_PORTS=2
2830	# export MV2_CPU_MAPPING=0:1:2:3
2831	# mpiexec ./a.out $ROPTS
2832	# export MPI_LAUNCH_TIMEOUT=360
2833	echo "no_coupling" > runfile_atmos
2834	mpiexec_mpt -np $ii ./a.out $ROPTS
2835	else
2836	printf "\n +++ no debug available on \"$localhost\" "
2837	printf "\n or not implemented in mrun so far"
2838	locat=debug
2839	exit
2840	fi
2841	else
2842	if [[ -n $numprocs ]]
2843	then
2844
2845	# RUNNING THE PROGRAM ON PARALLEL MACHINES
2846	if [[ $(echo $host \| cut -c1-3) = ibm ]]
2847	then
2848	# SETUP THE IBM MPI ENVIRONMENT
2849	export MP_SHARED_MEMORY=yes
2850	export AIXTHREAD_SCOPE=S
2851	export OMP_NUM_THREADS=$threads_per_task
2852	export XLSMPOPTS="spins=0:yields=0:stack=20000000"
2853	export AUTHSTATE=files
2854	export XLFRTEOPTS="nlwidth=132:err_recovery=no" # RECORD-LENGTH OF NAMELIST-OUTPUT
2855	# export MP_PRINTENV=yes
2856
2857	# TUNING-VARIABLEN ZUR VERBESSERUNG DER KOMMUNIKATION
2858	# ZEIGEN ABER DERZEIT (SEP 04, FEDERATION) KAUM WIRKUNG
2859	export MP_WAIT_MODE=poll
2860	[[ $node_usage = not_shared ]] && export MP_SINGLE_THREAD=yes
2861	# export MP_EAGER_LIMIT=65535
2862
2863	# # TESTWEISE FUER TURBOMPI (JAN 05)
2864	# export MPJ_MTAB=128
2865	# export MPJ_ALLTOALL=1
2866	# export MPJ_ALLTOALLV=1
2867
2868	if [[ "$LOADLBATCH" = yes ]]
2869	then
2870	printf "\n--- Control: OMP_NUM_THREADS = \"$OMP_NUM_THREADS\" \n"
2871	if [[ "$cond1" = hpmcount \|\| "$cond2" = hpmcount ]]
2872	then
2873	/opt/optibm/HPM_2_4_1/bin/hpmcount a.out $ROPTS
2874	else
2875	poe ./a.out $ROPTS
2876	fi
2877	else
2878	if [[ $localhost = ibmb \|\| $localhost = ibmh \|\| $localhost = ibms ]]
2879	then
2880	poe a.out -procs $numprocs -nodes 1 -rmpool 0 $ROPTS
2881	elif [[ $localhost = ibmy ]]
2882	then
2883	if [[ -f $hostfile ]]
2884	then
2885	cp $hostfile hostfile
2886	else
2887	(( ii = 1 ))
2888	while (( ii <= $numprocs ))
2889	do
2890	echo $localhost_realname >> hostfile
2891	(( ii = ii + 1 ))
2892	done
2893	fi
2894	export MP_HOSTFILE=hostfile
2895	./a.out -procs $tasks_per_node $ROPTS
2896	else
2897	if [[ "$host_file" = "" ]]
2898	then
2899	printf "\n +++ no hostfile given in configuration file"
2900	locat=config_file
2901	exit
2902	else
2903	eval host_file=$host_file
2904	fi
2905	export MP_HOSTFILE=$host_file
2906	poe a.out -procs $numprocs -tasks_per_node $numprocs $ROPTS
2907	fi
2908	fi
2909	elif [[ $host = nech \|\| $host = neck ]]
2910	then
2911	(( ii = nodes ))
2912	if [[ $ii = 1 ]]
2913	then
2914	export F_ERRCNT=0 # acceptable number of errors before program is stopped
2915	export MPIPROGINF=YES
2916	# export F_TRACE=YES\|FMT1\|FMT2 # output of ftrace informations to job protocol
2917	echo "*** execution on single node with mpirun"
2918	mpirun -np $numprocs ./a.out $ROPTS
2919	else
2920	(( i = 0 ))
2921	while (( i < ii ))
2922	do
2923	echo "-h $i -p $tasks_per_node -e ./mpi_exec_shell" >> multinode_config
2924	(( i = i + 1 ))
2925	done
2926
2927	echo "#!/bin/sh" > mpi_exec_shell
2928	echo " " >> mpi_exec_shell
2929	echo "set -u" >> mpi_exec_shell
2930	echo "F_ERRCNT=0" >> mpi_exec_shell
2931	echo "MPIPROGINV=YES" >> mpi_exec_shell
2932	echo "OMP_NUM_THREADS=$threads_per_task" >> mpi_exec_shell
2933	echo "cpurest=$cpurest" >> mpi_exec_shell
2934	echo "fname=$fname" >> mpi_exec_shell
2935	echo "localhost=$localhost" >> mpi_exec_shell
2936	echo "return_addres=$return_addres" >> mpi_exec_shell
2937	echo "return_username=$return_username" >> mpi_exec_shell
2938	echo "tasks_per_node=$tasks_per_node" >> mpi_exec_shell
2939	echo "write_binary=$write_binary" >> mpi_exec_shell
2940	echo "use_seperate_pe_for_dvrp_output=$use_seperate_pe_for_dvrp_output" >> mpi_exec_shell
2941	echo " " >> mpi_exec_shell
2942	echo "export F_ERRCNT" >> mpi_exec_shell
2943	echo "export MPIPROGINV" >> mpi_exec_shell
2944	echo "export OMP_NUM_THREADS" >> mpi_exec_shell
2945	echo "export cpurest" >> mpi_exec_shell
2946	echo "export fname" >> mpi_exec_shell
2947	echo "export localhost" >> mpi_exec_shell
2948	echo "export return_addres" >> mpi_exec_shell
2949	echo "export return_username" >> mpi_exec_shell
2950	echo "export tasks_per_node" >> mpi_exec_shell
2951	echo "export write_binary" >> mpi_exec_shell
2952	echo "export use_seperate_pe_for_dvrp_output" >> mpi_exec_shell
2953	echo " " >> mpi_exec_shell
2954	echo "exec ./a.out" >> mpi_exec_shell
2955
2956	chmod u+x mpi_exec_shell
2957	export MPIPROGINF=YES
2958	mpirun -f multinode_config &
2959	wait
2960
2961	fi
2962	elif [[ $(echo $host \| cut -c1-2) = lc && $host != lctit ]]
2963	then
2964
2965	# COPY HOSTFILE FROM SOURCE DIRECTORY OR CREATE IT, IF IT
2966	# DOES NOT EXIST
2967	if [[ $host != lcsgih && $host != lcsgib ]]
2968	then
2969	if [[ -f $hostfile ]]
2970	then
2971	cp $hostfile hostfile
2972	else
2973	(( ii = 1 ))
2974	while (( ii <= $numprocs / $threads_per_task ))
2975	do
2976	echo $localhost_realname >> hostfile
2977	(( ii = ii + 1 ))
2978	done
2979	fi
2980	eval zeile=\"`head -n $ii hostfile`\"
2981	printf "\n *** running on: $zeile"
2982	fi
2983
2984	(( ii = $numprocs / $threads_per_task ))
2985	export OMP_NUM_THREADS=$threads_per_task
2986	echo "OMP_NUM_THREADS=$OMP_NUM_THREADS"
2987	if [[ $threads_per_task != 1 ]]
2988	then
2989	printf "\n threads per task: $threads_per_task"
2990	fi
2991	if [[ $run_coupled_model = false ]]
2992	then
2993	printf "\n\n"
2994	if [[ $host = lcsgih \|\| $host = lcsgib ]]
2995	then
2996	# ulimit -s 300000 # A too large stack size causes problems
2997	# export MV2_NUM_PORTS=2
2998	# export MV2_CPU_MAPPING=0:1:2:3
2999	# mpiexec ./a.out $ROPTS
3000	# export MPI_LAUNCH_TIMEOUT=360
3001	mpiexec_mpt -np $ii ./a.out $ROPTS
3002	elif [[ $host = lcxt4 ]]
3003	then
3004	aprun -n $ii -N $tasks_per_node a.out $ROPTS
3005	else
3006	echo "no_coupling" > runfile_atmos
3007	mpiexec -machinefile hostfile -n $ii a.out < runfile_atmos $ROPTS
3008	fi
3009	else
3010
3011	# currently there is no full MPI-2 support on ICE and XT4
3012	(( iia = $numprocs_atmos / $threads_per_task ))
3013	(( iio = $numprocs_ocean / $threads_per_task ))
3014	printf "\n coupled run ($iia atmosphere, $iio ocean)"
3015	printf "\n using $coupled_mode coupling"
3016	printf "\n\n"
3017
3018	if [[ $coupled_mode = "mpi2" ]]
3019	then
3020	echo "atmosphere_to_ocean $iia $iio" > runfile_atmos
3021	echo "ocean_to_atmosphere $iia $iio" > runfile_ocean
3022	if [[ $host = lcsgih \|\| $host = lcsgib ]]
3023	then
3024
3025	mpiexec_mpt -np $iia ./palm $ROPTS < runfile_atmos &
3026	mpiexec_mpt -np $iio ./palm $ROPTS < runfile_ocean &
3027
3028	elif [[ $host = lcxt4 ]]
3029	then
3030
3031	aprun -n $iia -N $tasks_per_node a.out < runfile_atmos $ROPTS &
3032	aprun -n $iio -N $tasks_per_node a.out < runfile_ocean $ROPTS &
3033
3034	else
3035	# WORKAROUND BECAUSE mpiexec WITH -env option IS NOT AVAILABLE ON SOME SYSTEMS
3036	mpiexec -machinefile hostfile -n $iia a.out $ROPTS < runfile_atmos &
3037	mpiexec -machinefile hostfile -n $iio a.out $ROPTS < runfile_ocean &
3038	# mpiexec -machinefile hostfile -n $iia -env coupling_mode atmosphere_to_ocean a.out $ROPTS &
3039	# mpiexec -machinefile hostfile -n $iio -env coupling_mode ocean_to_atmosphere a.out $ROPTS &
3040	fi
3041	wait
3042
3043	else
3044
3045	echo "coupled_run $iia $iio" > runfile_atmos
3046	if [[ $host = lcsgih \|\| $host = lcsgib ]]
3047	then
3048
3049	mpiexec_mpt -np $ii a.out $ROPTS < runfile_atmos
3050
3051	elif [[ $host = lcxt4 ]]
3052	then
3053
3054	aprun -n $ii -N $tasks_per_node a.out < runfile_atmos $ROPTS
3055
3056	fi
3057	wait
3058	fi
3059
3060	# if [[ $scirocco = true ]]
3061	# then
3062	# mpiexec -machinefile hostfile -n $ii a.out $ROPTS
3063	# else
3064	# mpirun -machinefile hostfile -np $ii a.out $ROPTS
3065	# fi
3066	fi
3067	elif [[ $host = decalpha ]]
3068	then
3069	dmpirun -np $numprocs a.out $ROPTS
3070	elif [[ $host = lctit ]]
3071	then
3072	export runfile=runfile.$kennung
3073
3074	echo "cd $PWD" > $runfile
3075	echo "export OMP_NUM_THREADS=$OMP_NUM_THREADS" >> $runfile
3076	echo "export cpurest=$cpurest" >> $runfile
3077	echo "export fname=$fname" >> $runfile
3078	echo "export localhost=$localhost" >> $runfile
3079	echo "export return_addres=$return_addres" >> $runfile
3080	echo "export return_username=$return_username" >> $runfile
3081	echo "export tasks_per_node=$tasks_per_node" >> $runfile
3082	echo "export write_binary=$write_binary" >> $runfile
3083	echo "export use_seperate_pe_for_dvrp_output=$use_seperate_pe_for_dvrp_output" >> $runfile
3084	echo "./a.out" >> $runfile
3085	chmod u+x $runfile
3086
3087	if [[ "$QUEUE" = interactive ]]
3088	then
3089	mpirun -np $numprocs a.out $ROPTS
3090	else
3091	(( mem_tsubame = $memory / 1024.0 ))
3092	echo "Memory for Tsubame for each process in GB:", $mem_tsubame
3093	# n1ge -fore -g 1S060156 -mpi $numprocs -mem 4 -N palm -q $queue a.out $ROPTS
3094	/n1ge/TITECH_GRID/tools/bin/n1ge -fore -g $group_number -mpi ${numprocs}:$tasks_per_node -mem $mem_tsubame -N palm -rt $minuten -q $queue a.out $ROPTS
3095	fi
3096
3097	rm $runfile
3098	else
3099	mpprun -n $numprocs a.out $ROPTS
3100	fi
3101	[[ $? != 0 ]] && execution_error=true
3102
3103
3104	# PERFORMANCE-AUSWERTUNG MIT APPRENTICE
3105	if [[ "$cond1" = apprentice \|\| "$cond2" = apprentice ]]
3106	then
3107	apprentice
3108	fi
3109	else
3110	a.out $ROPTS
3111	fi
3112	fi
3113	if [[ $? != 0 \|\| $execution_error = true ]]
3114	then
3115
3116	# ABBRUCH BEI LAUFZEITFEHLER
3117	# [[ ! ( "$cond1" = debug \|\| "$cond2" = debug ) ]] && cat aout_output*
3118	printf "\n +++ runtime error occured"
3119	locat=execution
3120	exit
3121	else
3122	# [[ ! ( "$cond1" = debug \|\| "$cond2" = debug ) ]] && cat aout_output*
3123	printf "\n$striche\n *** execution finished \n"
3124	fi
3125
3126
3127
3128	# EVENTUELLE OUTPUT-KOMMANDOS ABARBEITEN
3129	(( i = 0 ))
3130	while (( i < ioc ))
3131	do
3132	(( i = i + 1 ))
3133	if (( i == 1 ))
3134	then
3135	printf "\n\n *** execution of OUTPUT-commands:\n$striche"
3136	fi
3137	printf "\n >>> ${out_command[$i]}"
3138	eval ${out_command[$i]}
3139	if (( i == ioc ))
3140	then
3141	printf "\n$striche\n"
3142	fi
3143	done
3144
3145
3146	# EVTL. INHALT DES AKTUELLEN VERZEICHNISSES AUSGEBEN
3147	if [[ $do_trace = true ]]
3148	then
3149	printf "\n\n"
3150	ls -al
3151	fi
3152
3153
3154
3155	# OUTPUT-DATEIEN AN IHRE ZIELORTE KOPIEREN
3156	(( i = 0 ))
3157	while (( i < iout ))
3158	do
3159	(( i = i + 1 ))
3160	if (( i == 1 ))
3161	then
3162	printf "\n\n *** saving OUTPUT-files:\n$striche"
3163	fi
3164
3165	# PRUEFEN, OB EINZELDATEI ODER DATEI PRO PROZESSOR
3166	files_for_pes=false; filetyp=file
3167	if [[ "${actionout[$i]}" = pe && -n $numprocs ]]
3168	then
3169	files_for_pes=true; filetyp=directory
3170	actionout[$i]=""
3171	elif [[ "${actionout[$i]}" = pe && ! -n $numprocs ]]
3172	then
3173	actionout[$i]=""
3174	elif [[ "${actionout[$i]}" = arpe && -n $numprocs ]]
3175	then
3176	files_for_pes=true; filetyp=directory
3177	actionout[$i]="ar"
3178	elif [[ "${actionout[$i]}" = arpe && ! -n $numprocs ]]
3179	then
3180	actionout[$i]="ar"
3181	elif [[ "${actionout[$i]}" = flpe && -n $numprocs ]]
3182	then
3183	files_for_pes=true; filetyp=directory
3184	actionout[$i]="fl"
3185	elif [[ "${actionout[$i]}" = flpe && ! -n $numprocs ]]
3186	then
3187	actionout[$i]="fl"
3188	elif [[ "${actionout[$i]}" = trpe && -n $numprocs ]]
3189	then
3190	files_for_pes=true; filetyp=directory
3191	actionout[$i]="tr"
3192	elif [[ "${actionout[$i]}" = trpe && ! -n $numprocs ]]
3193	then
3194	actionout[$i]="tr"
3195	fi
3196
3197	if [[ ! -f ${localout[$i]} && $files_for_pes = false ]]
3198	then
3199	printf "\n +++ temporary OUTPUT-file ${localout[$i]} does not exist\n"
3200	elif [[ ! -f ${localout[$i]}/_0000 && $files_for_pes = true ]]
3201	then
3202	printf "\n +++ temporary OUTPUT-file ${localout[$i]}/.... does not exist\n"
3203	else
3204
3205
3206	# KOPIEREN PER FTP/SCP (IMMER IM BINAERMODUS, -M: FALLS ZIELKATALOG
3207	# NICHT VORHANDEN, WIRD VERSUCHT, IHN ANZULEGEN), ABER NUR BEI
3208	# REMOTE-RECHNUNGEN
3209	if [[ "${actionout[$i]}" = tr ]]
3210	then
3211	if [[ $localhost != $fromhost ]]
3212	then
3213	if [[ $files_for_pes = false ]]
3214	then
3215	cps=""
3216	cst=""
3217	else
3218	cps=-c
3219	cst="/"
3220	fi
3221	if [[ $localhost = ibmh \|\| $localhost = ibmb \|\| $localhost = nech ]]
3222	then
3223
3224	# TRANSFER IN EIGENSTAENDIGEM JOB
3225	# ZUERST KOPIE DER DATEI INS TEMPORAERE DATENVERZEICHNIS
3226	[[ ! -d $tmp_data_catalog/TRANSFER ]] && mkdir -p $tmp_data_catalog/TRANSFER
3227	file_to_transfer=${fname}_${localout[$i]}_to_transfer_$kennung
3228	if [[ $files_for_pes = false ]]
3229	then
3230	ln -f ${localout[$i]} $tmp_data_catalog/TRANSFER/$file_to_transfer
3231	else
3232	mkdir $tmp_data_catalog/TRANSFER/$file_to_transfer
3233	ln ${localout[$i]}/* $tmp_data_catalog/TRANSFER/$file_to_transfer
3234	fi
3235
3236	echo "set -x" > transfer_${localout[$i]}
3237	echo "cd $tmp_data_catalog/TRANSFER" >> transfer_${localout[$i]}
3238
3239	printf "\n >>> OUTPUT: ${localout[$i]}$cst by SCP in seperate job to"
3240	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}$cst"
3241	printf "\n or higher cycle\n"
3242	echo "batch_scp $cps -b -m -u $return_username $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
3243
3244	echo "[[ \$? = 0 ]] && rm $file_to_transfer" >> transfer_${localout[$i]}
3245
3246	if [[ $localhost = nech ]]
3247	then
3248	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 900 transfer_${localout[$i]}
3249	else
3250	if [[ "$LOGNAME" = b323013 ]]
3251	then
3252	subjob -v -q c1 -X 0 -m 1000 -t 900 -c $job_catalog transfer_${localout[$i]}
3253	else
3254	subjob -d -v -q c1 -X 0 -m 1000 -t 900 -c $job_catalog transfer_${localout[$i]}
3255	fi
3256	fi
3257
3258	else
3259
3260	# TRANSFER INNERHALB DIESES JOBS
3261	transfer_failed=false
3262	printf "\n >>> OUTPUT: ${localout[$i]}$cst by SCP to"
3263	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}$cst\n"
3264	batch_scp $cps -b -m -u $return_username $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
3265	[[ $? != 0 ]] && transfer_failed=true
3266
3267	# BEI FEHLGESCHLAGENEM TRANSFER SICHERUNGSKOPIE AUF
3268	# LOKALER MASCHINE ANLEGEN
3269	if [[ $transfer_failed = true ]]
3270	then
3271	printf " +++ transfer failed. Trying to save a copy on the local host under:\n"
3272	printf " ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung\n"
3273
3274	# ERSTMAL PRUEFEN, OB VERZEICHNIS EXISTIERT. GEGEBENENFALLS
3275	# ANLEGEN.
3276	eval local_catalog=${pathout[$i]}
3277	if [[ ! -d $local_catalog ]]
3278	then
3279	printf " *** local directory does not exist. Trying to create:\n"
3280	printf " $local_catalog \n"
3281	mkdir -p $local_catalog
3282	fi
3283	eval cp ${localout[$i]} ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung
3284	transfer_problems=true
3285	fi
3286	fi
3287	else
3288
3289	# WERTZUWEISUNG, SO DASS WEITER UNTEN NUR KOPIERT WIRD
3290	actionout[$i]=""
3291	fi
3292	fi
3293
3294
3295	# APPEND PER FTP/SCP (IMMER IM BINAERMODUS, -M: FALLS ZIELKATALOG
3296	# NICHT VORHANDEN, WIRD VERSUCHT, IHN ANZULEGEN), ABER NUR BEI
3297	# REMOTE-RECHNUNGEN
3298	if [[ "${actionout[$i]}" = tra ]]
3299	then
3300	if [[ $localhost != $fromhost ]]
3301	then
3302	if [[ $localhost = ibmh \|\| $localhost = ibmb \|\| $localhost = nech ]]
3303	then
3304
3305	# TRANSFER IN EIGENSTAENDIGEM JOB
3306	# ZUERST KOPIE DER DATEI INS TEMPORAERE DATENVERZEICHNIS
3307	[[ ! -d $tmp_data_catalog/TRANSFER ]] && mkdir -p $tmp_data_catalog/TRANSFER
3308	file_to_transfer=${fname}_${localout[$i]}_to_transfer_$kennung
3309	ln -f ${localout[$i]} $tmp_data_catalog/TRANSFER/$file_to_transfer
3310
3311	echo "set -x" > transfer_${localout[$i]}
3312	echo "cd $tmp_data_catalog/TRANSFER" >> transfer_${localout[$i]}
3313
3314	printf "\n >>> OUTPUT: ${localout[$i]} append by SCP in seperate job to"
3315	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}"
3316	printf "\n or higher cycle\n"
3317	echo "batch_scp -A -b -m -u $return_username $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
3318
3319	echo "[[ \$? = 0 ]] && rm $file_to_transfer" >> transfer_${localout[$i]}
3320
3321	if [[ $localhost = nech ]]
3322	then
3323	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 900 transfer_${localout[$i]}
3324	else
3325	if [[ $LOGNAME = b323013 ]]
3326	then
3327	subjob -v -q c1 -X 0 -m 1000 -t 900 -c $job_catalog transfer_${localout[$i]}
3328	else
3329	subjob -d -v -q c1 -X 0 -m 1000 -t 900 -c $job_catalog transfer_${localout[$i]}
3330	fi
3331	fi
3332
3333	else
3334
3335	# TRANSFER INNERHALB DIESES JOBS
3336	transfer_failed=false
3337	printf "\n >>> OUTPUT: ${localout[$i]} append by SCP to"
3338	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}\n"
3339	batch_scp -A -b -m -u $return_username $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
3340	[[ $? != 0 ]] && transfer_failed=true
3341
3342	# BEI FEHLGESCHLAGENEM TRANSFER SICHERUNGSKOPIE AUF
3343	# LOKALER MASCHINE ANLEGEN
3344	if [[ $transfer_failed = true ]]
3345	then
3346	printf " +++ transfer failed. Trying to save a copy on the local host under:\n"
3347	printf " ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung\n"
3348
3349	# ERSTMAL PRUEFEN, OB VERZEICHNIS EXISTIERT. GEGEBENENFALLS
3350	# ANLEGEN
3351	eval local_catalog=${pathout[$i]}
3352	if [[ ! -d $local_catalog ]]
3353	then
3354	printf " *** local directory does not exist. Trying to create:\n"
3355	printf " $local_catalog \n"
3356	mkdir -p $local_catalog
3357	fi
3358
3359	eval cp ${localout[$i]} ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung
3360	transfer_problems=true
3361	fi
3362	fi
3363	else
3364
3365	# WERTZUWEISUNG, SO DASS WEITER UNTEN NUR APPEND AUF
3366	# LOKALER MASCHINE DURCHGEFUEHRT WIRD
3367	actionout[$i]=a
3368	fi
3369	fi
3370
3371
3372	# OUTPUT-DATEI FUER EINEN FORTSETZUNGSLAUF. DATEI WIRD PER
3373	# LINK AUF DEN TEMPORAEREN DATENKATALOG GELEGT. OPTION -f WIRD
3374	# VERWENDET, FALLS DORT NOCH EINE DATEI GLEICHEN NAMENS VORHANDEN
3375	# SEIN SOLLTE. ANSCHLIESSEND WIRD SEINE ARCHIVIERUNG ANGESTOSSEN
3376	if [[ "${actionout[$i]}" = fl ]]
3377	then
3378	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
3379	chmod g+rx $tmp_data_catalog
3380	if [[ $files_for_pes = false ]]
3381	then
3382	printf "\n >>> OUTPUT: ${localout[$i]} to"
3383	printf "\n $tmp_data_catalog/${frelout[$i]} (temporary data catalog)\n"
3384	ln -f ${localout[$i]} $tmp_data_catalog/${frelout[$i]}
3385	else
3386	printf "\n >>> OUTPUT: ${localout[$i]}/.... to"
3387	printf "\n $tmp_data_catalog/${frelout[$i]} (temporary data catalog)\n"
3388	mkdir $tmp_data_catalog/${frelout[$i]}
3389	cd ${localout[$i]}
3390	for file in $(ls *)
3391	do
3392	ln -f $file $tmp_data_catalog/${frelout[$i]}
3393	done
3394	cd $TEMPDIR
3395	fi
3396
3397
3398	# ARCHIVIERUNGSJOB WIRD ERZEUGT UND ABGESCHICKT
3399	if [[ $store_on_archive_system = true ]]
3400	then
3401
3402	if [[ $archive_system = asterix ]]
3403	then
3404	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3405	if [[ $files_for_pes = false ]]
3406	then
3407	echo "stageout ${frelout[$i]} > STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3408	else
3409	echo "stageout -t ${frelout[$i]} > STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3410	fi
3411	echo "cat STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3412	echo "if [[ \$(grep -c \"st.msg:150\" STAGE_OUTPUT${i}_$kennung) != 0 ]]" >> archive_${frelout[$i]}
3413	echo "then" >> archive_${frelout[$i]}
3414	echo " do_stageout=false" >> archive_${frelout[$i]}
3415	echo "else" >> archive_${frelout[$i]}
3416	echo " echo \" +++ $filetyp ${frelout[$i]} could not be stored on archive-system\" " >> archive_${frelout[$i]}
3417	echo " cat /dev/null > ~/job_queue/ARCHIVE_ERROR_$fname" >> archive_${frelout[$i]}
3418	echo " cat STAGE_OUTPUT${i}_$kennung > ~/job_queue/archive_${frelout[$i]}_error" >> archive_${frelout[$i]}
3419	echo " echo \" *** $filetyp ${frelout[$i]} will be copied to \$WORK as backup\" " >> archive_${frelout[$i]}
3420	if [[ $files_for_pes = false ]]
3421	then
3422	echo " cp ${frelout[$i]} \$WORK" >> archive_${frelout[$i]}
3423	else
3424	echo " cp -r ${frelout[$i]} \$WORK/${frelout[$i]}" >> archive_${frelout[$i]}
3425	fi
3426	echo " echo \" *** $filetyp ${frelout[$i]} saved\" " >> archive_${frelout[$i]}
3427	echo "fi" >> archive_${frelout[$i]}
3428	echo "rm STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3429	elif [[ $archive_system = DMF ]]
3430	then
3431	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3432	if [[ $files_for_pes = false ]]
3433	then
3434	printf "\n +++ archiving of single files impossible with $archive_system !\n"
3435	locat=DMF
3436	exit
3437	else
3438	# FUER RECHNER IN JUELICH. DORT KOENNTEN AUCH
3439	# EINZELNE DATEIEN GESICHERT WERDEN (SPAETER KORR.)
3440	echo "rm -rf \$ARCHIVE/${frelout[$i]}" >> archive_${frelout[$i]}
3441	echo "cp -r ${frelout[$i]} \$ARCHIVE" >> archive_${frelout[$i]}
3442	fi
3443	elif [[ $archive_system = tivoli ]]
3444	then
3445	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3446	if [[ $files_for_pes = false ]]
3447	then
3448	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3449	echo "set -x" >> archive_${frelout[$i]}
3450	echo "rm -rf \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3451	echo "cp ${frelout[$i]} \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3452	else
3453
3454	echo "set -x" >> archive_${frelout[$i]}
3455	echo "rm -rf \$PERM/${frelout[$i]}/*" >> archive_${frelout[$i]}
3456	echo "[[ ! -d \$PERM/${frelout[$i]} ]] && mkdir $PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3457	cd $tmp_data_catalog
3458	all_files=`ls -1 ${frelout[$i]}/*`
3459	cd - > /dev/null
3460	(( inode = 0 ))
3461	(( tp1 = tasks_per_node + 1 ))
3462	while (( inode < nodes ))
3463	do
3464	# echo "*** all_files = \"$all_files\" "
3465	files=`echo $all_files \| cut -d" " -f1-$tasks_per_node`
3466	all_files=`echo $all_files \| cut -d" " -f$tp1-`
3467	# echo "*** tasks_per_node = \"$tasks_per_node\" "
3468	# echo "*** files = \"$files\" "
3469	# echo "*** all_files = \"$all_files\" "
3470	echo "tar cvf \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar $files" >> archive_${frelout[$i]}
3471	echo "dsmc incremental \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar" >> archive_${frelout[$i]}
3472	echo "dsmmigrate \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar" >> archive_${frelout[$i]}
3473	(( inode = inode + 1 ))
3474	done
3475	# echo "rm -rf \$PERM/${frelout[$i]}.tar" >> archive_${frelout[$i]}
3476	# echo "tar cvf \$PERM/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
3477	fi
3478	elif [[ $archive_system = ut ]]
3479	then
3480	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3481	if [[ $files_for_pes = false ]]
3482	then
3483	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3484	echo "set -x" >> archive_${frelout[$i]}
3485	echo "rm -rf \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3486	echo "cp ${frelout[$i]} \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3487	else
3488
3489	echo "set -x" >> archive_${frelout[$i]}
3490	echo "rm -rf \$UT/${frelout[$i]}/*" >> archive_${frelout[$i]}
3491	echo "[[ ! -d \$UT/${frelout[$i]} ]] && mkdir $UT/${frelout[$i]}" >> archive_${frelout[$i]}
3492	cd $tmp_data_catalog
3493	all_files=`ls -1 ${frelout[$i]}/*`
3494	cd - > /dev/null
3495	(( inode = 0 ))
3496	(( tp1 = tasks_per_node + 1 ))
3497	while (( inode < nodes ))
3498	do
3499	files=`echo $all_files \| cut -d" " -f1-$tasks_per_node`
3500	all_files=`echo $all_files \| cut -d" " -f$tp1-`
3501	echo "tar cvf \$UT/${frelout[$i]}/${frelout[$i]}.node_$inode.tar $files" >> archive_${frelout[$i]}
3502	(( inode = inode + 1 ))
3503	done
3504	fi
3505	elif [[ $archive_system = none ]]
3506	then
3507	printf " +++ archiving on $localhost not available!\n"
3508	fi
3509
3510	if [[ $archive_system != none ]]
3511	then
3512	if [[ $localhost = ibmh \|\| $localhost = ibmb ]]
3513	then
3514	# subjob -d -v -q cdata -X 0 -m 1000 -t 43200 -c $job_catalog archive_${frelout[$i]}
3515	subjob -v -q cdata -X 0 -m 1000 -t 43200 -c $job_catalog archive_${frelout[$i]}
3516	elif [[ $localhost = nech ]]
3517	then
3518	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 7200 archive_${frelout[$i]}
3519	fi
3520	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
3521	fi
3522	else
3523	printf " +++ caution: option -A is switched on. No archiving on $archive_system!\n"
3524	fi
3525
3526
3527	# LEERDATEI IM BENUTZERVERZEICHNIS ANLEGEN, DAMIT BEKANNT IST,
3528	# WIE DIE HOECHSTE ZYKLUSNUMMER AUF DEM ARCHIV-SYSTEM LAUTET
3529	if [[ $files_for_pes = false ]]
3530	then
3531	cat /dev/null > ${pathout[$i]}
3532	else
3533	mkdir -p ${pathout[$i]}
3534	fi
3535
3536	fi
3537
3538
3539	# KOPIEREN AUF LOKALER MASCHINE ZUM ARCHIV-SYSTEM
3540	# AUSSERDEM MUSS LEERDATEI ANGELEGT WERDEN, DAMIT BEKANNT IST,
3541	# WIE DIE HOECHSTE ZYKLUSNUMMER AUF DEM ARCHIV-SYSTEM LAUTET
3542	# FALLS IRGENDEINE (VON MEHREREN) ARCHIVIERUNGEN SCHIEF GEHT,
3543	# WIRD FLAG GESETZT UND BLEIBT AUCH BEI WEITEREN ORDNUNGS-
3544	# GEMAESSEN ARCHIVIERUNGEN GESETZT
3545	if [[ "${actionout[$i]}" = ar ]]
3546	then
3547	if [[ $files_for_pes = false ]]
3548	then
3549	printf "\n >>> OUTPUT: ${localout[$i]} to"
3550	printf "\n ${pathout[$i]}"
3551	printf "\n File will be copied to archive-system ($archive_system) !\n"
3552	else
3553	printf "\n >>> OUTPUT: ${localout[$i]}/_.... to"
3554	printf "\n ${pathout[$i]}"
3555	printf "\n Directory will be copied to archive-system ($archive_system) !\n"
3556	fi
3557	mv ${localout[$i]} ${frelout[$i]}
3558
3559	file_saved=false
3560
3561	if [[ $archive_system = asterix ]]
3562	then
3563	do_stageout=true
3564	(( stageout_anz = 0 ))
3565	while [[ $do_stageout = true ]]
3566	do
3567	if [[ $files_for_pes = false ]]
3568	then
3569	stageout ${frelout[$i]} > STAGE_OUTPUT
3570	else
3571	stageout -t ${frelout[$i]} > STAGE_OUTPUT
3572	fi
3573	cat STAGE_OUTPUT
3574	if [[ $(grep -c "st.msg:150" STAGE_OUTPUT) != 0 ]]
3575	then
3576	file_saved=true
3577	do_stageout=false
3578	else
3579	if [[ $files_for_pes = false ]]
3580	then
3581	printf "\n +++ file ${frelout[$i]} could not be saved on archive-system"
3582	else
3583	printf "\n +++ directory ${frelout[$i]} could not be saved on archive-system"
3584	fi
3585	(( stageout_anz = stageout_anz + 1 ))
3586	if (( stageout_anz == 10 ))
3587	then
3588	printf "\n +++ stoped after 10 unsuccessful tries!"
3589	archive_save=false
3590	do_stageout=false
3591	else
3592	printf "\n *** new try to store on archive after 15 min:"
3593	sleep 900
3594	fi
3595	fi
3596	done
3597	elif [[ $archive_system = DMF ]]
3598	then
3599	if [[ $files_for_pes = false ]]
3600	then
3601	printf "\n +++ archiving of single files impossible on $archive_system!\n"
3602	locat=DMF
3603	exit
3604	else
3605	rm -rf $ARCHIVE/${frelout[$i]}
3606	cp -r ${frelout[$i]} $ARCHIVE
3607	fi
3608	file_saved=true
3609	elif [[ $archive_system = tivoli ]]
3610	then
3611	# ARCHIVIERUNG NUR PER BATCH-JOB MOEGLICH
3612	# DATEI MUSS ZWISCHENZEITLICH INS TEMPORAERE DATENVERZEICHNIS
3613	# GELEGT WERDEN
3614	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
3615	chmod g+rx $tmp_data_catalog
3616	if [[ $files_for_pes = false ]]
3617	then
3618	ln -f ${frelout[$i]} $tmp_data_catalog/${frelout[$i]}
3619	else
3620	mkdir $tmp_data_catalog/${frelout[$i]}
3621	ln -f ${frelout[$i]}/* $tmp_data_catalog/${frelout[$i]}
3622	fi
3623
3624	# BATCH JOB GENERIEREN UND ABSCHICKEN; DATEI MUSS WIEDER
3625	# AUS TEMPORAEREM DATENVERZEICHNIS ENTFERNT WERDEN
3626	echo "cd $tmp_data_catalog" > archive_${frelout[$i]}
3627	if [[ $files_for_pes = false ]]
3628	then
3629	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3630	echo "rm -rf \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3631	echo "cp ${frelout[$i]} \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3632	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3633	else
3634	echo "rm -rf \$PERM/${frelout[$i]}.tar" >> archive_${frelout[$i]}
3635	echo "tar cvf \$PERM/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
3636	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3637	fi
3638
3639	subjob -v -d -q cdata -X 0 -m 1000 -t 43200 -c $job_catalog archive_${frelout[$i]}
3640	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
3641	file_saved=true
3642
3643	elif [[ $archive_system = ut ]]
3644	then
3645	# ARCHIVIERUNG NUR PER BATCH-JOB MOEGLICH
3646	# DATEI MUSS ZWISCHENZEITLICH INS TEMPORAERE DATENVERZEICHNIS
3647	# GELEGT WERDEN
3648	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
3649	chmod g+rx $tmp_data_catalog
3650	if [[ $files_for_pes = false ]]
3651	then
3652	ln -f ${frelout[$i]} $tmp_data_catalog/${frelout[$i]}
3653	else
3654	mkdir $tmp_data_catalog/${frelout[$i]}
3655	ln -f ${frelout[$i]}/* $tmp_data_catalog/${frelout[$i]}
3656	fi
3657
3658	# BATCH JOB GENERIEREN UND ABSCHICKEN; DATEI MUSS WIEDER
3659	# AUS TEMPORAEREM DATENVERZEICHNIS ENTFERNT WERDEN
3660	echo "cd $tmp_data_catalog" > archive_${frelout[$i]}
3661	if [[ $files_for_pes = false ]]
3662	then
3663	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3664	echo "rm -rf \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3665	echo "cp ${frelout[$i]} \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3666	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3667	else
3668	echo "rm -rf \$UT/${frelout[$i]}.tar" >> archive_${frelout[$i]}
3669	echo "tar cvf \$UT/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
3670	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3671	fi
3672
3673	subjob -v -c /pf/b/$usern/job_queue -d -q pp -X 0 -m 1000 -t 7200 archive_${frelout[$i]}
3674	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
3675	file_saved=true
3676
3677	else
3678	printf "\n +++ archive_system=\"$archive_system\" archiving impossible!"
3679	archive_save=false
3680	fi
3681	if [[ $file_saved = true ]]
3682	then
3683	if [[ $files_for_pes = false ]]
3684	then
3685	cat /dev/null > ${pathout[$i]}
3686	else
3687	mkdir -p ${pathout[$i]}
3688	fi
3689	fi
3690	fi
3691
3692	# APPEND AUF LOKALER MASCHINE
3693	if [[ "${actionout[$i]}" = "a" ]]
3694	then
3695	printf "\n >>> OUTPUT: ${localout[$i]} append to ${pathout[$i]}\n"
3696	cat ${localout[$i]} >> ${pathout[$i]}
3697	fi
3698
3699	# KOPIEREN AUF LOKALER MASCHINE
3700	# ES MUSS KOPIERT WERDEN, DA MOVE NICHT UEBER FILESYSTEM HINAUS MOEGLICH
3701	if [[ "${actionout[$i]}" = "" && $files_for_pes = false ]]
3702	then
3703
3704	# KOPIEREN AUF EINPROZESSORMASCHINE
3705	if [[ "${extout[$i]}" != " " && "${extout[$i]}" != "" ]]
3706	then
3707	printf "\n >>> OUTPUT: ${localout[$i]} to ${pathout[$i]}.${extout[$i]}\n"
3708	if [[ $link_local_output = true ]]
3709	then
3710	printf " using ln -f\n"
3711	ln -f ${localout[$i]} ${pathout[$i]}.${extout[$i]}
3712	fi
3713	# If "ln -f" fails of if "$link_local_output = false" do a normal "cp"
3714	if [[ ! -f "${pathout[$i]}.${extout[$i]}" ]]
3715	then
3716	if [[ $link_local_output = true ]]
3717	then
3718	printf " ln failed, using cp...\n"
3719	fi
3720	cp ${localout[$i]} ${pathout[$i]}.${extout[$i]}
3721	fi
3722	else
3723	printf "\n >>> OUTPUT: ${localout[$i]} to ${pathout[$i]}\n"
3724	if [[ $link_local_output = true ]]
3725	then
3726	printf " using ln -f\n"
3727	ln -f ${localout[$i]} ${pathout[$i]}
3728	fi
3729	# If "ln -f" fails of if "$link_local_output = false" do a normal "cp"
3730	if [[ ! -f "${pathout[$i]}" ]]
3731	then
3732	if [[ $link_local_output = true ]]
3733	then
3734	printf " ln failed, using cp...\n"
3735	fi
3736	cp ${localout[$i]} ${pathout[$i]}
3737	fi
3738	fi
3739
3740	elif [[ "${actionout[$i]}" = "" && $files_for_pes = true ]]
3741	then
3742
3743	# DIE DEN PROZESSOREN EINES PARALLELRECHNERS ZUGEHOERIGEN
3744	# DATEIEN WERDEN ERST IN EINEM KATALOG GESAMMELT UND DIESER
3745	# WIRD DANN KOPIERT
3746	# PER MOVE UMBENANNT WERDEN
3747	printf "\n >>> OUTPUT: ${localout[$i]}/_.... to ${pathout[$i]}\n"
3748	if [[ $link_local_output = true ]]
3749	then
3750	printf " using ln -f\n"
3751	mkdir ${pathout[$i]}
3752	cd ${localout[$i]}
3753	for file in $(ls *)
3754	do
3755	ln -f $file ${pathout[$i]}
3756	done
3757	cd $TEMPDIR
3758	fi
3759	# If "ln -f" fails of if "$link_local_output = false" do a normal "cp -r"
3760	if [[ ! -f "${pathout[$i]}/_0000" ]]
3761	then
3762	if [[ $link_local_output = true ]]
3763	then
3764	printf " ln failed for .../_0000, using cp...\n"
3765	fi
3766	cp -r ${localout[$i]} ${pathout[$i]}
3767	fi
3768
3769	fi
3770	fi
3771	done
3772	if (( i != 0 ))
3773	then
3774	if [[ $transfer_problems = true ]]
3775	then
3776	printf "\n$striche\n *** OUTPUT-files saved"
3777	printf "\n +++ WARNING: some data transfers failed! \n"
3778	else
3779	printf "\n$striche\n *** all OUTPUT-files saved \n"
3780	fi
3781	fi
3782
3783
3784	# EVENTUELL FOLGEJOB STARTEN
3785	# DATEI CONTINUE_RUN MUSS VOM BENUTZERPROGRAMM AUS ERZEUGT WERDEN
3786	if [[ -f CONTINUE_RUN ]]
3787	then
3788
3789	if [[ $archive_save = true ]]
3790	then
3791
3792	# ZUERST IN MRUN-AUFRUF OPTIONEN FUER FORTSETZUNGSLAUF, FUER
3793	# STILLES ABARBEITEN (OHNE INTERAKTIVE RUECKFAGEN) UND FUER
3794	# BATCH-BETRIEB (NUR WICHTIG, FALLS BATCH AUF LOKALER MASCHINE
3795	# DURCHGEFUEHRT WERDEN SOLL) EINFUEGEN, FALLS NICHT BEREITS VOR-
3796	# HANDEN
3797	[[ $(echo $mc \| grep -c "\-C") = 0 ]] && mc="$mc -C"
3798	[[ $(echo $mc \| grep -c "\-v") = 0 ]] && mc="$mc -v"
3799	[[ $(echo $mc \| grep -c "\-b") = 0 ]] && mc="$mc -b"
3800	if [[ $(echo $mc \| grep -c "#") != 0 ]]
3801	then
3802	mc=`echo $mc \| sed 's/#/f/g'`
3803	fi
3804
3805
3806	# JOB STARTEN
3807	printf "\n\n *** initiating restart-run on \"$return_addres\" using command:\n"
3808	echo " $mc"
3809	printf "\n$striche\n"
3810	if [[ $localhost != $fromhost ]]
3811	then
3812
3813	if [[ $localhost = lcsgih \|\| $localhost = lcsgib \|\| $localhost = nech \|\| $localhost = ibmb \|\| $localhost = ibmh \|\| $localhost = ibms \|\| $localhost = lctit ]]
3814	then
3815	echo "*** ssh will be used to initiate restart-runs!"
3816	echo " return_addres=\"$return_addres\" "
3817	echo " return_username=\"$return_username\" "
3818	if [[ $return_addres = 172.20.25.41 ]]
3819	then
3820	# WORKAROUND AUF SCIROCCO AM TIT
3821	print "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc " \| ssh $return_addres -l $return_username
3822	else
3823	ssh $return_addres -l $return_username "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc "
3824	fi
3825	else
3826	printf "\n +++ no restart mechanism available for host \"$localhost\" "
3827	locat=restart; exit
3828	fi
3829
3830	# WARTEN, DAMIT SICH RESTART JOB IN QUEUE EINREIHEN KANN, BEVOR
3831	# DER AKTUELLE JOB ENDET
3832	sleep 30
3833
3834	else
3835
3836	# BEI RECHNUNGEN AUF LOKALER MASCHINE KANN MRUN DIREKT AUFGE-
3837	# RUFEN WERDEN, AUSSER AUF lcfimm
3838	cd $LOCAL_PWD
3839	if [[ $localhost = lcfimm ]]
3840	then
3841	ssh $return_addres -l $return_username "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc "
3842	else
3843	eval $mc # ' MUESSEN AUSGEWERTET WERDEN
3844	fi
3845	cd - > /dev/null
3846	fi
3847	printf "\n$striche\n *** restart-run initiated \n"
3848
3849
3850	# EVENTUELL INPUT-DATEIEN, DIE VON TEMPORAEREM DATENVERZEICHNIS
3851	# GEHOLT WORDEN SIND, LOESCHEN
3852	(( i = 0 ))
3853	while (( i < iin ))
3854	do
3855	(( i = i + 1 ))
3856	if [[ "${got_tmp[$i]}" = true && $keep_data_from_previous_run = false ]]
3857	then
3858	rm -r $tmp_data_catalog/${frelin[$i]}
3859	fi
3860	done
3861
3862	else
3863
3864	printf "\n +++ no restart-run possible, since errors occured"
3865	printf "\n during the archive process"
3866	fi
3867
3868	fi
3869
3870
3871
3872	# EVTL. EMAIL-BENACHRICHTIGUNG UEBER ABGESCHLOSSENEN LAUF
3873	if [[ "$email_notification" != "" ]]
3874	then
3875
3876	if [[ $localhost != $fromhost ]]
3877	then
3878	if [[ -f CONTINUE_RUN ]]
3879	then
3880	echo "PALM restart run necessary" > email_text
3881	echo "description header of actual run:" >> email_text
3882	cat CONTINUE_RUN >> email_text
3883	echo "mrun-command to restart:" >> email_text
3884	echo "$mc" >> email_text
3885	else
3886	echo "PALM run with base filename \"$fname\" on host \"$localhost\" finished" > email_text
3887	fi
3888	mail $email_notification < email_text
3889	printf "\n *** email notification sent to \"$email_notification\" "
3890	fi
3891	fi
3892
3893
3894
3895	# ALLE ARBEITEN BEENDET. TEMPORAERER KATALOG KANN GELOESCHT WERDEN
3896	cd $HOME
3897	[[ $delete_temporary_catalog = true ]] && rm -rf $TEMPDIR
3898
3899	else
3900
3901
3902	# FALLS AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL, WERDEN JETZT ENTSPRE-
3903	# CHENDE AKTIONEN DURCHGEFUEHRT
3904
3905	# MRUN-BEFEHL FUER REMOTE-MASCHINE ZUSAMMENSTELLEN
3906	mrun_com="$mrun_script_name -a $afname -c $config_file -d $fname -h $host -H $fromhost -m $memory -t $cpumax -q $queue -R $return_addres -U $return_username -u $remote_username"
3907	[[ "$cpp_opts" != "" ]] && mrun_com=${mrun_com}" -D \"$cpp_opts\""
3908	[[ "$global_revision" != "" ]] && mrun_com=${mrun_com}" -G \"$global_revision\""
3909	[[ $group_number != none ]] && mrun_com=${mrun_com}" -g $group_number"
3910	[[ $do_compile = true ]] && mrun_com=${mrun_com}" -s \"$source_list\""
3911	[[ "$input_list" != "" ]] && mrun_com=${mrun_com}" -i \"$input_list\""
3912	[[ $ignore_archive_error = true ]] && mrun_com=${mrun_com}" -I"
3913	[[ $keep_data_from_previous_run = true ]] && mrun_com=${mrun_com}" -k"
3914	[[ "$additional_conditions" != "" ]] && mrun_com=${mrun_com}" -K \"$additional_conditions\""
3915	# [[ "$makefile" != "$source_path/Makefile" ]] && mrun_com=${mrun_com}" -M \"$makefile\""
3916	[[ "$output_list" != "" ]] && mrun_com=${mrun_com}" -o \"$output_list\""
3917	[[ "$read_from_config" = false ]] && mrun_com=${mrun_com}" -S"
3918	[[ $do_trace = true ]] && mrun_com=${mrun_com}" -x"
3919	[[ "$numprocs" != "" ]] && mrun_com=${mrun_com}" -X $numprocs"
3920	if [[ $use_openmp = true ]]
3921	then
3922	mrun_com=${mrun_com}" -O"
3923	[[ "$tasks_per_node" != "" ]] && mrun_com=${mrun_com}" -T $threads_per_task"
3924	else
3925	[[ "$tasks_per_node" != "" ]] && mrun_com=${mrun_com}" -T $tasks_per_node"
3926	fi
3927	[[ $store_on_archive_system = false ]] && mrun_com=${mrun_com}" -A"
3928	[[ $package_list != "" ]] && mrun_com=${mrun_com}" -p \"$package_list\""
3929	[[ $return_password != "" ]] && mrun_com=${mrun_com}" -P $return_password"
3930	[[ $delete_temporary_catalog = false ]] && mrun_com=${mrun_com}" -B"
3931	[[ $node_usage != default && "$(echo $node_usage \| cut -c1-3)" != "sla" && $node_usage != novice ]] && mrun_com=${mrun_com}" -n $node_usage"
3932	[[ $run_coupled_model = true ]] && mrun_com=${mrun_com}" -Y \"$coupled_dist\""
3933	if [[ $do_remote = true ]]
3934	then
3935	printf "\n>>>> MRUN-command on execution host:\n>>>> $mrun_com \n"
3936	fi
3937
3938
3939	# ZUSAMMENSTELLUNG DES JOBSCRIPTS AUF DATEI jobfile
3940	jobfile=jobfile.$RANDOM
3941
3942
3943	# TEMPORAERES VERZEICHNIS GENERIEREN UND NACH DORT WECHSELN
3944	echo "mkdir $TEMPDIR" >> $jobfile
3945	echo "cd $TEMPDIR" >> $jobfile
3946
3947
3948	# EVENTUELL FEHLERVERFOLGUNG AKTIVIEREN
3949	if [[ $do_trace = true ]]
3950	then
3951	echo "set -x" >> $jobfile
3952	else
3953	echo "set +vx" >> $jobfile
3954	fi
3955
3956
3957	# BEREITSTELLUNG VON QUELLTEXTEN, MRUN-SCRIPTS UND KONFIGURATIONS-
3958	# DATEI FUER DEN JOB
3959	if [[ $( echo $host \| cut -c1-5 ) = lcsgi ]]
3960	then
3961
3962	# KONFIGURATIONSDATEI UND MRUN_SCRIPT IN DAS SOURCE-VERZEICHNIS
3963	# KOPIEREN
3964	if [[ $restart_run != true ]]
3965	then
3966	cp $config_file $working_directory/SOURCES_FOR_RUN_$fname
3967	cp ${PALM_BIN}/$mrun_script_name $working_directory/SOURCES_FOR_RUN_$fname
3968	fi
3969
3970	# SOURCE-VERZEICHNIS VOM LOKALEN RECHNER PER SCP TRANSFERIEREN
3971	echo "set -x" >> $jobfile
3972	echo "scp -r $return_username@$return_addres:$working_directory/SOURCES_FOR_RUN_$fname ." >> $jobfile
3973	echo "export SOURCES_COMPLETE=true" >> $jobfile
3974
3975	# QUELLTEXTE, MRUN-SCRIPT UND KONFIGURATIONSDATEI IN DAS AKTUELLE
3976	# ARBEITSVERZEICHNIS VERSCHIEBEN
3977	echo "mv SOURCES_FOR_RUN_$fname/$config_file . " >> $jobfile
3978	echo "mv SOURCES_FOR_RUN_$fname/$mrun_script_name . " >> $jobfile
3979	echo "execute_mrun=true" >> $jobfile
3980	echo " " >> $jobfile
3981
3982	else
3983
3984	# ABSPEICHERN DER QUELLTEXTE (NUR FALLS UEBERSETZT WERDEN SOLL)
3985	# SOWIE GEGEBENENFALLS DES MAKEFILES
3986	if [[ $do_compile = true ]]
3987	then
3988
3989	source_catalog=SOURCES_FOR_RUN_$fname
3990
3991	# UNTERVERZEICHNIS FUER QUELLTEXTE UND MAKEFILE ANLEGEN
3992	# MRUN WIRD DIESES VRZEICHNIS UEBER ENVIRONMENT VARIABLE
3993	# MITGETEILT (UEBERSTEUERT ANGABE IN KONFIGURATIONSDATEI)
3994	echo "mkdir SOURCES_FOR_RUN_$fname" >> $jobfile
3995	echo "export SOURCES_COMPLETE=true" >> $jobfile
3996	echo "cd SOURCES_FOR_RUN_$fname" >> $jobfile
3997
3998	for filename in $source_list
3999	do
4000	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
4001	echo "cat > $filename << \"%END%\"" >> $jobfile
4002	cat $source_catalog/$filename >> $jobfile
4003	echo " " >> $jobfile
4004	echo "%END%" >> $jobfile
4005	echo " " >> $jobfile
4006	done
4007
4008	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
4009	echo "cat > Makefile << \"%END%\"" >> $jobfile
4010	cat $source_catalog/Makefile >> $jobfile
4011	echo " " >> $jobfile
4012	echo "%END%" >> $jobfile
4013	echo " " >> $jobfile
4014
4015	echo "cd - > /dev/null" >> $jobfile
4016
4017	fi
4018
4019
4020	# ABSPEICHERN DER KONFIGURATIONSDATEI
4021	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
4022	echo "cat > $config_file << \"%END%\"" >> $jobfile
4023	cat $config_file >> $jobfile
4024	echo "%END%" >> $jobfile
4025	echo " " >> $jobfile
4026
4027
4028	# ABSPEICHERN DER AKTUELLEN MRUN-VERSION
4029	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
4030	echo "cat > $mrun_script_name <<\"%END%\"" >> $jobfile
4031	cat ${PALM_BIN}/$mrun_script_name >> $jobfile
4032	echo "%END%" >> $jobfile
4033	if [[ $host = lctit ]]
4034	then
4035	echo "sed 's/bin\/ksh/home2\/usr5\/mkanda\/pub\/ksh/' < $mrun_script_name > mrun_new" >> $jobfile
4036	echo "mv mrun_new $mrun_script_name" >> $jobfile
4037	fi
4038	echo "chmod u+x $mrun_script_name" >> $jobfile
4039	echo "execute_mrun=true" >> $jobfile
4040	echo " " >> $jobfile
4041
4042	fi
4043
4044
4045	# EVTL. BENOETIGTE INPUT-DATEIEN PER FTP HOLEN ODER DEM JOB DIREKT
4046	# MITGEBEN UND AUF DEM REMOTE-RECHNER IM BENUTZERVERZEICHNIS ABLEGEN
4047	# FALLS DIESES NICHT EXISTIERT, WIRD VERSUCHT, DAS JEWEILS LETZTE
4048	# UNTERVERZEICHNIS DES PFADNAMENS ANZULEGEN
4049	if [[ $do_remote = true ]]
4050	then
4051	(( i = 0 ))
4052	while (( i < iin ))
4053	do
4054	(( i = i + 1 ))
4055	echo "[[ ! -d ${pathin[$i]} ]] && mkdir -p ${pathin[$i]}" >> $jobfile
4056	if [[ "${transin[$i]}" = job ]]
4057	then
4058	echo "cat > ${remotepathin[$i]} <<\"%END%\"" >> $jobfile
4059	eval cat ${pathin[$i]}/${frelin[$i]} >> $jobfile
4060	echo " " >> $jobfile
4061	echo "%END%" >> $jobfile
4062	else
4063	echo "batch_scp -b -o -g -s -u $return_username $return_addres ${remotepathin[$i]} \"${pathin[$i]}\" ${frelin[$i]}" >> $jobfile
4064	fi
4065
4066	# UEBERPRUEFEN, OB DATEI ANGELEGT WERDEN KONNTE
4067	echo "if [[ \$? = 1 ]]" >> $jobfile
4068	echo "then" >> $jobfile
4069	echo " echo \" \" " >> $jobfile
4070	echo " echo \"+++ file ${remotepathin[$i]} could not be created\" " >> $jobfile
4071	echo " echo \" please check, if directory exists on $host!\" " >> $jobfile
4072	echo " echo \"+++ MRUN will not be continued\" " >> $jobfile
4073	echo " execute_mrun=false" >> $jobfile
4074	echo "fi" >> $jobfile
4075	done
4076	fi
4077
4078	# ARBEITSKATALOG AUF DER LOKALEN MASCHINE FUER EVENTUELLE
4079	# FORTSETZUNGSLAUEFE PER ENV-VARIABLE UEBERGEBEN
4080	echo "LOCAL_PWD=$working_directory" >> $jobfile
4081	echo "export LOCAL_PWD" >> $jobfile
4082
4083	# EBENSO LOKALEN MRUN-KATALOG UEBERGEBEN
4084	echo "LOCAL_MRUN_PATH=$PALM_BIN" >> $jobfile
4085	echo "export LOCAL_MRUN_PATH" >> $jobfile
4086
4087	# WORKAROUND FUER RIAM-NEC-JOBS WEGEN PROFILE-SCHWIERIGKEITEN
4088	if [[ $localhost_realname = "gate" \|\| $localhost = lctit ]]
4089	then
4090	echo "export PALM_BIN=$PALM_BIN" >> $jobfile
4091	fi
4092
4093	# MRUN AUF ZIELRECHNER AUFRUFEN
4094	echo "set -x" >> $jobfile
4095	echo "[[ \$execute_mrun = true ]] && ./$mrun_com" >> $jobfile
4096
4097	echo 'ls -al; echo `pwd`' >> $jobfile
4098	echo "cd \$HOME" >> $jobfile
4099	echo "rm -rf $TEMPDIR" >> $jobfile
4100
4101
4102
4103
4104	# JOB PER SUBJOB STARTEN
4105	if [[ $silent = false ]]
4106	then
4107	printf "\n "
4108	else
4109	printf "\n\n"
4110	fi
4111
4112	subjob $job_on_file -h $host -u $remote_username -g $group_number -q $queue -m $memory -N $node_usage -t $cpumax $XOPT $TOPT $OOPT -n $fname -v -c $job_catalog $jobfile
4113	rm -rf $jobfile
4114
4115
4116	fi # ENDE REMOTE-TEIL
4117
4118
4119
4120	# ENDE DER PROZEDUR

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