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source: palm/trunk/SCRIPTS/mrun @ 563

Last change on this file since 563 was 562, checked in by raasch, 14 years ago
bugfixes for wrong netcdf/3.6.3 module, last revision 561, and setting of MPI_TYPE_DEPTH for netCDF4/HDF5 with mpt -library
Property svn:keywords set to `Id Rev`
File size: 173.1 KB

Rev	Line
[71]	1	#!/bin/ksh
[503]	2	# mrun - script for running PALM jobs
[169]	3	# $Id: mrun 562 2010-09-13 13:48:16Z raasch $
[1]	4
[503]	5	# Procedure for interactive/batch PALM runs (initial runs and automatic
	6	# restart runs)
[1]	7
[503]	8	# Last changes:
[1]	9	# 03/03/94 - Siggi - Entwicklungsbeginn
	10	# 21/03/94 - Siggi - Entwicklungsabschluss (Version 1.0)
	11	# 09/12/94 - Siggi - allexport unterbunden; statt dessen werden jetzt ein-
	12	# zelne Variable exportiert. Dies ist noetig, weil an-
	13	# sonsten irgendein Speicher ueberlaeuft und von mrun
	14	# aufgerufene Programme (z.B. stageout) mit Fehlern
	15	# abbrechen (too many arguments)
	16	# 20/06/95 - Siggi - noclobber muss explizit abgeschaltet, da jetzt
	17	# defaultmaessig im RRZN-Profile eingeschaltet
	18	# 10/06/97 - Siggi - Zusaetzliche Option -C bei cpp, damit // nicht
	19	# wegfallen
	20	# 25/04/00 - Siggi - Version 1.5
	21	# remote_addres und remote_user in return_addres bzw.
	22	# return_username umbenannt, return_username wird dem
	23	# mrun-Aufruf im Job ueber Option -U mitgegeben.
	24	# Neue Variable remote_username, die beim interaktiven
	25	# mrun-Aufruf zwingend ueber die neue Option -u oder
	26	# in der Konfigurationsdatei angegeben werden muss.
	27	# 08/02/01 - Siggi - Alle mrun-Meldungen ins englische uebersetzt,
	28	# Version 1.7
	29	# 05/05/02 - Siggi - Uebersetzungen mittels make-Mechanismus moeglich
	30	# 21/11/02 - Siggi - ENV-Variable XLFRTEOPTS wird vor Ausfuehrung auf
	31	# IBM gesetzt, um Record-Laenge der NAMELIST-Dateien,
	32	# zu bestimmen; Praeprozessoroptionen haben nun alle
	33	# die Form -Dtext=text, weil auf IBM sonst text durch
	34	# die leere Zeichenkette ersetzt wird
	35	# 01/08/03 - Siggi - Test of implementing dvrp+1PE on ibm
	36	# 07/01/04 - Siggi - additional preprocessor directive for ibm included
	37	# (-D$OMP=OMP) in order to avoid problems with
	38	# OMP_NUM_THREADS
	39	# 04/01/05 - Siggi - archiving on hanni and berni is done in separate
	40	# tar files, one for each node used
	41	# 07/01/04 - Siggi - old code for t3e, vpp and hpcs eliminated
	42	# 09/01/05 - Siggi - workaround for getting the IP address on gfdl3
	43	# 17/01/05 - Siggi - job for data transfer to local machine now within
	44	# job class c1 (HLRN)
	45	# 27/01/05 - Siggi - IP address workaround for gfdl3 removed
	46	# 28/01/05 - Siggi - tar-filenames on $PERM (HLRN) now include the
	47	# base filename and cycle number
	48	# 16/02/05 - Gerald - hababai validated
	49	# 14/03/05 - Siggi - abort on NEC after first runtime error (F_ERRCNT)
	50	# 29/03/05 - Marcus - berni*-en0 validated
	51	# 21/04/05 - Siggi - transfer-job-protocol for avs-data is no more stored
	52	# 24/04/05 - Siggi - netcdf support on lcmuk
	53	# 25/04/05 - Siggi - netcdf support on gfld3 (decalpha)
	54	# 11/05/05 - Siggi - files with non-numeric extensions (.xxx after cycle
	55	# number) can now be used within interactive runs
	56	# 12/05/05 - Siggi - netcdf support on ibm
	57	# 13/05/05 - Siggi - error in tar-filenames on $PERM (HLRN) removed
	58	# 18/05/05 - Siggi - netcdf support on nec
	59	# 24/05/05 - Siggi - netcdf support on ibms
	60	# 14/06/05 - Siggi - sleep interval after submit of restart job increased
	61	# to 30 seconds
	62	# 28/06/05 - Siggi - bora adjusted to new intel compiler (LD_LIBRARY_
	63	# PATH is temporarily set)
	64	# 07/09/05 - Siggi - setting of MP_EAGER_LIMIT switched off because it
	65	# caused warnings in the job protocol
	66	# 20/10/05 - Siggi - update of netcdf-version on decalpha (gfdl3)
	67	# 25/10/05 - Siggi - error in listing files for getting the cycle number
	68	# removed
	69	# 26/10/05 - Siggi - new paths for dvrp-library, transfer of catalogs
	70	# realized by file attribute trpe
	71	# 28/10/05 - Siggi - if existing, the file extension is output in case
	72	# of missing input file - no job abort in case of
	73	# missing input files with file extensions
	74	# (preliminary solution)
	75	# 31/10/05 - Siggi - data transfer from nech now within seperate job
	76	# 04/11/05 - Siggi - netcdf 3.6.0-p1 on ibmh/ibmb
	77	# 07/12/05 - Siggi - gallego and elephanta admitted
	78	# 30/12/05 - Siggi - gfdl5 (ibmy) admitted
	79	# 10/01/06 - Siggi - cpp directive for NetCDF 64bit support
	80	# 20/01/06 - Siggi - cpp directive for ibmy
	81	# 09/02/06 - Siggi - ibmy admitted for batch mode
	82	# 13/04/06 - Siggi - ostria admitted
	83	# 18/04/06 - Siggi - usage of OpenMP implemented (additional option -O)
	84	# 10/05/06 - Siggi - environment variable XLSMPOPTS set on IBM for
	85	# optimization of OpenMP runs (option stacksize is
	86	# necessary for large gridpoint numbers because
	87	# otherwise a segmentation fault occurs)
	88	# 23/05/05 - Siggi - lctit (SUN Fire X4600) admitted
	89	# 21/08/06 - Siggi - standard mrun path on scirocco is as on bora
	90	# 23/08/06 - Siggi - netcdf support for scirocco (notebook)
	91	# 20/09/06 - Marcus - add DVRP library on nech
	92	# 24/10/06 - Siggi - Environment variables for PALM steering are written
	93	# on local NAMELIST file ENVPAR
	94	# 24/11/06 - Siggi - levanto admitted, maestro switched to ifc 9.1
	95	# 28/11/06 - Siggi - call to interpret_config.x_levanto because of SuSe 10
	96	# 06/02/07 - Siggi - add DVRP library on lcmuk
	97	# 07/02/07 - Siggi - revision of source code handling, source code is
	98	# now expected in directory given by source_path and
	99	# not in the current working directory, source code
	100	# files provided in add_source_path are allways
	101	# compiled, source code to be compiled is allways
	102	# sampled in SOURCES_FOR_RUN_$fname which is a
	103	# subdirectory of the current working directory,
[5]	104	# -s TEST changed to -s WRITE_PERMIT or -s WP,
[1]	105	# adapted for RIAM (neck)
[5]	106	# bugfix for cycle number of output file (extout)
	107	# all hpmuk-related code removed
[14]	108	# 14/02/07 - Siggi - dvrp support for neck added
[21]	109	# 28/02/07 - Siggi - empty lines in configuration file are accepted
[26]	110	# mrun_path replaced by PALM_BIN,
	111	# all machines are calling interpret_config.x
[66]	112	# 14/03/07 - Siggi - fimm admitted, revision number added to terminal
	113	# output
[69]	114	# 16/03/07 - Siggi - adjustments for lctit
[78]	115	# 29/03/07 - Siggi - global revision transfered to batch job by new
	116	# option -G
[82]	117	# 30/03/07 - Siggi - compilation "by hand" removed, cpp-directives/options
	118	# + netcdf/dvrp-options are read from configuration
	119	# file, host identifier (local_host) is read from
	120	# config file, code related to ftp filetransfer
	121	# removed (incl. option -f)
[97]	122	# 19/06/07 - Siggi - time limit for cdata jobs increased
[102]	123	# 25/07/07 - Siggi - two sets of executables can be started on lcmuk,
	124	# if new option -Y (coupling) is given,
	125	# output of executables to aout_output removed,
	126	# messages are immediately written to stdout instead
[108]	127	# 03/08/07 - Marcus - add XOPT="-X $numprocs" for lcfimm
	128	# 09/08/07 - Marcus - workaround on lcfimm to propagate environment
	129	# variables out to the nodes in coupled mode -disabled-
	130	# 13/08/07 - Marcus - start local restart jobs per ssh on lcfimm
[109]	131	# 28/08/07 - Marcus - completely remove workaround on lcfimm to propagate
	132	# environment variables out to the nodes in coupled mode
[118]	133	# 15/10/07 - Siggi - Preliminary adjustments for lctit, based on Jin's
	134	# suggestions
[122]	135	# 19/10/07 - Marcus - further adjustments for lctit: add new optional
	136	# argument -g group_number, admit all sla* node_usage
	137	# queues
[129]	138	# 30/10/07 - Marcus - further adjustments for queues on lctit
[149]	139	# 14/02/08 - Bjoern - link of restart files with long file name possible
	140	# 28/02/08 - Marcus - If environment variable link_local_output is set to
	141	# true, mrun tries "ln -f" on local output and resorts
	142	# to "cp" or "cp -r" on error
[164]	143	# 15/04/08 - Siggi - argument -c introduced to most of the subjob calls,
	144	# which allows the user to choose his own job catalog
	145	# by setting job_catalog in the configuration file
	146	# (default is ~/job_queue),
[172]	147	# workaround for mpiexec with -env option,
[164]	148	# adjustments for lcxt4 (Bergen Center for Computational
	149	# Science)
[183]	150	# 22/05/08 - Marcus - If environment variable link_local_input is set to
	151	# true, mrun tries "ln -f" on local input and resorts
	152	# to "cp" or "cp -r" on error
[180]	153	# 27/05/08 - Siggi - PATH is set to PALM_BIN everywhere (missing so far)
[179]	154	# 14/07/08 - Siggi - adjustments for lcsgih
[188]	155	# 08/08/08 - Marcus - typo removed in lcxt4 branch
[204]	156	# 17/09/08 - Siggi - restart mechanism adjusted for lcsgi
[210]	157	# 02/10/08 - BjornM - argument "-Y" modified, adjustments for coupled runs
	158	# 21/10/08 - Siggi - bugfix for the case that -K has more than one
	159	# argument
[211]	160	# 08/11/08 - Siggi - bugfix for depository path settings in configuration
	161	# file
	162	# 11/11/08 - Siggi - rules for using user code files changed: user
	163	# code splitted into one file per subroutine,
	164	# user can provide his/her own makefile, only
	165	# default source-code filenames are allowed
[215]	166	# 14/11/08 - Siggi - cond1 and cond2 are part of the depository name
[221]	167	# 08/01/09 - Siggi - mpi module on sgi machines to be used can be set
	168	# with environment variable mpilib
[223]	169	# 13/01/09 - Siggi - totalview on hice/bice can be used in debug mode
	170	# using environment variable totalview
[246]	171	# 25/02/09 - Siggi - cputime-option (-t) is allowed to be omitted for
	172	# interactive runs
[253]	173	# 05/03/09 - Siggi - adjustments for new NEC-SX9 at RIAM (necriam)
[260]	174	# 16/03/09 - Siggi - dvrp_lib, dvrp_inc replaced by dvr_lib, dvr_inc,
	175	# dvr streaming server is automatically started using
	176	# new variable dvr_server and a configuration file
	177	# .dvrserver.config,
[261]	178	# processing of dvr output files using new script
	179	# process_dvr_output implemented, in order to make
	180	# dvr application more user friendly
[265]	181	# 20/03/09 - Marcus - update of n1ge command for lctit
[291]	182	# 16/04/09 - Siggi - new option -y for precursor (uncoupled) ocean runs
	183	# to be followed by a coupled atmosphere-ocean run
[343]	184	# 21/04/09 - Siggi - adjustments for new IBM at DKRZ, which is now ibmh
	185	# 24/06/09 - BjornM - adjustments for coupled/precursor runs on ibmy
[352]	186	# 08/07/09 - Siggi - default value for email_notification is none,
	187	# option -e added to subjob
[359]	188	# 19/08/09 - Marcus - MPI debug option
[362]	189	# 21/08/09 - Marcus - totalview on hice/bice also available for mvapich2
[367]	190	# 25/08/09 - BjornM - adpated for lck
[369]	191	# 26/08/09 - Siggi - additional environment variables for mpt on ice2
[372]	192	# 26/08/09 - Marcus - adjustment for ice2 on lcsgib
[397]	193	# 29/09/09 - Siggi - default value for archiving is false, option "-A"
	194	# switches on archiving, archiving on SGI-ICE enabled
[416]	195	# 16/10/09 - Carolin- adjustments for archiving on SGI-ICE of binary files;
	196	# adjustment for special1q
	197	# 18/12/09 - Carolin- modification of archiving (permq)
[440]	198	# 01/02/10 - Siggi - adapted for lcxt5m and lckyoto (Fujitsu HX600)
[475]	199	# 03/02/10 - Siggi - make options (mopts) to be set by configuration file
	200	# implemented
[493]	201	# 08/02/10 - Siggi - loading of modules now controlled via configuration
	202	# file (modules)
[503]	203	# 02/03/10 - Siggi - for each block in the configuration file, separate
	204	# utility programs are used, combine_plot_fields is
	205	# directly called and must not be given by an output
	206	# command in the configuration file any more
[540]	207	# 15/06/10 - Rieke - ssh from compute nodes to login nodes on hosts
	208	# lcsgih/lcsgib is done using the names
	209	# hicegate0/bicegate0 instead of the IP addresses
[544]	210	# 17/08/10 - BjornM - adjustments for interactive runs on lcxt4
[555]	211	# 07/09/10 - Siggi - bugfix for wrong netcdf/3.6.3 module on lcsgi
[437]	212
	213
[1]	214
	215	# VARIABLENVEREINBARUNGEN + DEFAULTWERTE
	216
	217	set +o allexport # SICHERHEITSHALBER UNTERBINDEN, DA SONST EVTL. STAGEOUT
	218	# NICHT LAUEFT (TOO MANY ARGUMENTS - PROBLEM)
	219	set +o noclobber # EXISTIERENDE DATEIEN DUERFEN UEBERSCHRIEBEN WERDEN
	220
	221	AddFilenames=""
	222	additional_conditions=""
	223	add_source_path=""
	224	afname=""
	225	archive_save=true
	226	archive_system=none
	227	compiler_name=""
	228	cond1=""
	229	cond2=""
	230	config_file=.mrun.config
[206]	231	coupled_dist=""
	232	coupled_mode="mpi1"
[1]	233	cpp_opts=""
[82]	234	cpp_options=""
[1]	235	cpumax=0
	236	cpurest=0
	237	delete_temporary_catalog=true
	238	do_batch=false
	239	do_compile=true
	240	do_remote=false
	241	do_stagein=true
	242	do_stageout=true
	243	do_trace=false
[352]	244	email_notification="none"
[1]	245	exclude=""
	246	executable=""
	247	execution_error=false
[67]	248	fimm=false
[1]	249	fname=test
	250	fromhost=""
[78]	251	global_revision=""
[122]	252	group_number=none
[1]	253	host=""
	254	host_file=""
	255	hp=""
	256	ignore_archive_error=false
	257	input_list=""
	258	interpreted_config_file=""
[164]	259	job_catalog="~/job_queue"
[1]	260	job_on_file=""
	261	keep_data_from_previous_run=false
[183]	262	link_local_input=false
[149]	263	link_local_output=false
[1]	264	localhost_realname=$(hostname)
	265	local_compile=false
[260]	266	local_dvrserver_running=.FALSE.
[1]	267	locat=normal
	268	mainprog=""
	269	makefile=""
	270	mc=$0
	271	while [[ $(echo $mc \| grep -c "/") != 0 ]]
	272	do
	273	mc=`echo $mc \| cut -f2- -d"/"`
	274	done
[493]	275	module_calls=""
[1]	276	mrun_script_name=$mc
[82]	277	netcdf_inc=""
	278	netcdf_lib=""
[1]	279	netcdf_support=false
	280	node_usage=default
	281	numprocs=""
[206]	282	numprocs_atmos=0
	283	numprocs_ocean=0
[1]	284	OOPT=""
	285	openmp=false
	286	output_list=""
	287	package_list=""
	288	punkte="..........................................................."
	289	queue=none
	290	read_from_config=""
[5]	291	restart_run=false
[146]	292	return_addres=$(nslookup `hostname` 2>&1 \| grep "Address:" \| tail -1 \| awk '{print $2}')
[1]	293	if [[ $return_addres = 130.75.105.158 ]]
	294	then
	295	return_addres=172.20.25.41
	296	echo "+++ WARNING: return_addres changed to $return_addres !!!!!"
	297	fi
	298	return_password=""
	299	return_username=$LOGNAME
	300	remotecall=false
	301	remote_username=""
[102]	302	run_coupled_model=false
[1]	303	run_mode=""
	304	scirocco=false
[397]	305	store_on_archive_system=false
[1]	306	striche=" ----------------------------------------------------------------------------"
	307	silent=false
	308	source_list=""
	309	source_path=SOURCE
	310	tasks_per_node=""
	311	threads_per_task=1
	312	tmpcreate=false
	313	tmp_data_catalog=""
	314	transfer_problems=false
	315	usern=$LOGNAME
[377]	316	use_openmp=false
[1]	317	working_directory=`pwd`
	318	TOPT=""
	319	XOPT=""
	320	zeit=$( date \| cut -c 12-19 )
	321
	322	typeset -i iec=0 iic=0 iin=0 ioc=0 iout=0 memory=0 stagein_anz=0 stageout_anz=0
[206]	323	typeset -i cputime i ii iia iii iio icycle inode ival jobges jobsek maxcycle minuten nodes pes sekunden tp1
[1]	324
[66]	325	typeset -R30 calltime
[1]	326	typeset -L20 spalte1
	327	typeset -L40 spalte2
	328	typeset -L60 spalte3
	329	typeset -L35 string1=`date`
	330	typeset -L12 string2=$usern
	331	typeset -L12 string3=$localhost_realname
	332	typeset -L12 string4
	333	typeset -L12 string5
[201]	334	typeset -L30 version="MRUN 2.0 Rev$Rev: 562 $"
[1]	335
	336
	337
	338	# EINZELNE VARIABLE FUER HAUPTPROGRAMM EXPORTIEREN
	339	export cpurest fname host localhost return_addres return_username remotecall tasks_per_node
	340
	341	# FOLGENDE VARIABLEN MUESSEN FUER DIE INTERPRETATION DER KONFIGURATIONSDATEI
	342	# EXPORTIERT WERDEN
	343	export afname config_file cpp_opts cpumax do_batch do_trace fname fromhost
[127]	344	export group_number input_list memory numprocs output_list queue run_mode
[1]	345
	346
	347
	348	# FEHLERBEHANDLUNG
	349	# BEI EXIT:
[83]	350	trap 'rm -rf $working_directory/tmp_mrun
[69]	351	if [[ $locat != localhost ]]
[1]	352	then
[22]	353	# if [[ ! -f ${mrun_path}/statistik/mrun_statistik ]]
	354	# then
	355	# cat > ${mrun_path}/statistik/mrun_statistik << %STATEND%
	356	#MRUN-calls on $localhost
	357	#
	358	#date and time user localhost remotehost termination mrun-command
	359	#--------------------------------------------------------------------------------------------------------------------
	360	#%STATEND%
	361	# chmod 666 ${mrun_path}/statistik/mrun_statistik
	362	# fi
	363	#
	364	# # EINTRAG IN DIE STATISTIK-DATEI
	365	# string4=$host
	366	# string5=$locat
	367	# if [[ "$job_on_file" = "" && $locat != control_c && $locat != user_abort ]]
	368	# then
	369	# if [[ $do_batch = true ]]
	370	# then
	371	# printf "$string1$string2$string3$string4$string5$mrun_com \n" >> ${mrun_path}/statistik/mrun_statistik
	372	# else
	373	# printf "$string1$string2$string3$string4$string5$mc \n" >> ${mrun_path}/statistik/mrun_statistik
	374	# fi
	375	# fi
[69]	376	echo " " > /dev/null
[1]	377	fi
	378
	379	if [[ $locat != normal && $locat != control_c && $locat != local_compile ]]
	380	then
	381
	382	# EVENTUELLE ERROR-KOMMANDOS ABARBEITEN
	383	(( i = 0 ))
	384	while (( i < iec ))
	385	do
	386	(( i = i + 1 ))
	387	printf "\n *** Execution of ERROR-command:\n"
	388	printf " >>> ${err_command[$i]}\n"
	389	eval ${err_command[$i]}
	390	done
	391	if [[ -n $interpreted_config_file ]] then
	392	rm -rf $interpreted_config_file
	393	fi
[71]	394	if [[ -n .mrun_environment ]] then
	395	rm -rf .mrun_environment
	396	fi
[1]	397	if [[ $tmpcreate = true ]]
	398	then
	399	printf "\n *** Contents of \"$TEMPDIR\":\n"
	400	ls -al; cd
	401	[[ $delete_temporary_catalog = true ]] && rm -rf $TEMPDIR
	402	fi
[260]	403	if [[ "$dvrserver_id" != "" ]]
	404	then
	405	echo "+++ killing dvrserver_id=$dvrserver_id"
	406	kill $dvrserver_id
	407	fi
[1]	408	if [[ -f ~/job_queue/JOBINFO.$QSUB_REQID ]]
	409	then
	410	rm -rf ~/job_queue/JOBINFO.$QSUB_REQID
	411	fi
	412	printf "\n\n+++ MRUN killed \n\n"
	413	elif [[ $locat != control_c ]]
	414	then
	415	printf "\n\n --> all actions finished\n\n"
	416	printf " Bye, bye $usern !!\n\n"
	417	fi' exit
	418
	419
	420	# BEI TERMINAL-BREAK:
[83]	421	trap 'rm -rf $working_directory/tmp_mrun
[69]	422	[[ $tmpcreate = true ]] && (cd; rm -rf $TEMPDIR)
[1]	423	if [[ -f ~/job_queue/JOBINFO.$QSUB_REQID ]]
	424	then
	425	rm -rf ~/job_queue/JOBINFO.$QSUB_REQID
	426	fi
[260]	427	if [[ "$dvrserver_id" != "" ]]
	428	then
	429	echo "+++ killing dvrserver_id=$dvrserver_id"
	430	kill $dvrserver_id
	431	fi
[1]	432	printf "\n+++ MRUN killed by \"^C\" \n\n"
	433	locat=control_c
	434	exit
	435	' 2
	436
	437
[22]	438	# CHECK IF THE PATH FOR THE PALM BINARIES (SCRIPTS+UTILITY-PROGRAMS) HAS
	439	# BEEN SET
	440	if [[ "$PALM_BIN" = "" ]]
	441	then
	442	printf "\n +++ environment variable PALM_BIN has not been set"
	443	printf "\n please set it to the directory where the PALM scripts are located"
	444	locat=palm_bin; exit
	445	fi
[180]	446	export PATH=$PALM_BIN:$PATH
[22]	447
	448
[1]	449
	450	# SHELLSCRIPT-OPTIONEN EINLESEN UND KOMMANDO NEU ZUSAMMENSETZEN, FALLS ES
	451	# FUER FOLGEJOBS BENOETIGT WIRD
[291]	452	while getopts :a:AbBc:Cd:D:Fg:G:h:H:i:IkK:m:M:n:o:Op:P:q:r:R:s:St:T:u:U:vxX:yY: option
[1]	453	do
	454	case $option in
	455	(a) afname=$OPTARG;;
[397]	456	(A) store_on_archive_system=true; mc="$mc -A";;
[1]	457	(b) do_batch=true; mc="$mc -b";;
	458	(B) delete_temporary_catalog=false; mc="$mc -B";;
	459	(c) config_file=$OPTARG; mc="$mc -c$OPTARG";;
[5]	460	(C) restart_run=true; mc="$mc -C";;
[1]	461	(d) fname=$OPTARG; mc="$mc -d$OPTARG";;
[210]	462	(D) cpp_opts="$cpp_opts $OPTARG"; mc="$mc -D'$OPTARG'";;
[79]	463	(F) job_on_file="-D"; mc="$mc -F";;
[122]	464	(g) group_number=$OPTARG; mc="$mc -g$OPTARG";;
[78]	465	(G) global_revision=$OPTARG; mc="$mc -G'$OPTARG'";;
[1]	466	(h) host=$OPTARG; mc="$mc -h$OPTARG";;
	467	(H) fromhost=$OPTARG; mc="$mc -H$OPTARG";;
	468	(i) input_list=$OPTARG; mc="$mc -i'$OPTARG'";;
	469	(I) ignore_archive_error=true; mc="$mc -I";;
	470	(k) keep_data_from_previous_run=true; mc="$mc -k";;
[210]	471	(K) additional_conditions="$OPTARG"; mc="$mc -K'$OPTARG'";;
[1]	472	(m) memory=$OPTARG; mc="$mc -m$OPTARG";;
	473	(M) makefile=$OPTARG; mc="$mc -M$OPTARG";;
	474	(n) node_usage=$OPTARG; mc="$mc -n$OPTARG";;
	475	(o) output_list=$OPTARG; mc="$mc -o'$OPTARG'";;
	476	(O) use_openmp=true; mc="$mc -O";;
	477	(p) package_list=$OPTARG; mc="$mc -p'$OPTARG'";;
	478	(P) return_password=$OPTARG; mc="$mc -P$OPTARG";;
	479	(q) queue=$OPTARG; mc="$mc -q$OPTARG";;
	480	(r) run_mode=$OPTARG; mc="$mc -r'$OPTARG'";;
	481	(R) remotecall=true;return_addres=$OPTARG; mc="$mc -R$OPTARG";;
	482	(s) source_list=$OPTARG; mc="$mc -s'$OPTARG'";;
	483	(S) read_from_config=false; mc="$mc -S";;
	484	(t) cpumax=$OPTARG; mc="$mc -t$OPTARG";;
	485	(T) tasks_per_node=$OPTARG; mc="$mc -T$OPTARG";;
	486	(u) remote_username=$OPTARG; mc="$mc -u$OPTARG";;
	487	(U) return_username=$OPTARG; mc="$mc -U$OPTARG";;
	488	(v) silent=true; mc="$mc -v";;
	489	(x) do_trace=true;set -x; mc="$mc -x";;
	490	(X) numprocs=$OPTARG; mc="$mc -X$OPTARG";;
[291]	491	(y) ocean_file_appendix=true; mc="$mc -y";;
[206]	492	(Y) run_coupled_model=true; coupled_dist=$OPTARG; mc="$mc -Y'$OPTARG'";;
[1]	493	(\?) printf "\n +++ unknown option $OPTARG \n"
	494	printf "\n --> type \"$0 ?\" for available options \n"
	495	locat=parameter;exit;;
	496	esac
	497	done
	498
	499
	500	# EVTL. POSITIONSPARAMETER EINLESEN
	501	# ZUR ZEIT GIBT ES NUR DEN PARAMETER ? (=KURZINFO)
	502	shift OPTIND-1
	503
	504
	505	# KURZE AUFRUFBESCHREIBUNG WIRD HIER AUSGEGEBEN
	506	if [[ "$1" = "?" ]]
	507	then
	508	(printf "\n *** mrun can be called as follows:\n"
[291]	509	printf "\n $mrun_script_name -b -c.. -d.. -D.. -f.. -F -h.. -i.. -I -K.. -m.. -o.. -p.. -r.. -R -s.. -t.. -T.. -v -x -X.. -y -Y.. <modus>\n"
[1]	510	printf "\n Description of available options:\n"
	511	printf "\n Option Description Default-Value"
	512	printf "\n -a base name of input files equiv. -d"
[400]	513	printf "\n -A archiving when using file-attribute fl"
[1]	514	printf "\n -b batch-job on local machine ---"
	515	printf "\n -B do not delete temporary directory at end ---"
	516	printf "\n -c configuration file .mrun.config"
	517	printf "\n -d base name of files attached to program test"
	518	printf "\n -D preprocessor(cpp)-directives \"\" "
	519	printf "\n -F create remote job file only ---"
	520	printf "\n -h execution host $localhost_realname"
	521	printf "\n -i INPUT control list \"\" "
	522	printf "\n -I archiving errors of previous batch-jobs"
	523	printf "\n will be ignored"
	524	printf "\n -k keep data from previous run"
	525	printf "\n -K additional conditions for controling"
	526	printf "\n usage of conditional code and"
	527	printf "\n env-variables in configuration file \"\" "
	528	printf "\n -m memory demand in MB (batch-jobs) 0 MB"
	529	printf "\n -M Makefile name Makefile"
	530	printf "\n -n node usage (shared/not_shared) depending on -h"
	531	printf "\n -o OUTPUT control list \"\" "
	532	printf "\n -O use OpenMP ---"
	533	printf "\n -p software package list \"\" "
	534	printf "\n -q queue \"$queue\" "
	535	printf "\n -r run control list (combines -i -o) \"\" "
	536	printf "\n -s filenames of routines to be compiled \"\" "
	537	printf "\n must end with .f, .f90, .F, or .c !"
	538	printf "\n use \"..\" for more than one file and wildcards"
	539	printf "\n -s TEST compiles all files with w-permit"
	540	printf "\n -S config file interpreted by shellscript ---"
	541	printf "\n -t allowed cpu-time in seconds (batch) 0"
	542	printf "\n -T tasks per node depending on -h"
	543	printf "\n -u username on remote machine \"\" "
	544	printf "\n -v no prompt for confirmation ---"
	545	printf "\n -x tracing of mrun for debug purposes ---"
	546	printf "\n -X # of processors (on parallel machines) 1"
[291]	547	printf "\n -y add appendix \"_O\" to all local output"
	548	printf "\n files (ocean precursor runs followed by"
	549	printf "\n coupled atmosphere-ocean runs) ---"
[206]	550	printf "\n -Y run coupled model, \"#1 #2\" with"
	551	printf "\n #1 atmosphere and #2 ocean processors \"#/2 #/2\" depending on -X"
[1]	552	printf "\n "
	553	printf "\n Possible values of positional parameter <modus>:"
	554	printf "\n \"?\" - this outline \n\n") \| more
	555	exit
	556	elif [[ "$1" != "" ]]
	557	then
	558	printf "\n +++ positional parameter $1 unknown \n"
	559	locat=parameter; exit
	560	fi
	561
	562
	563
	564	# KURZE STARTMELDUNG
	565	printf "\n*** $version "
	566	printf "\n will be executed. Please wait ..."
	567
	568
[82]	569
	570	# PRUEFEN, OB KONFIGURATIONS-DATEI VORHANDEN
	571	if [[ ! -f $config_file ]]
	572	then
	573	printf "\n\n +++ configuration file: "
	574	printf "\n $config_file"
	575	printf "\n does not exist"
	576	locat=connect; exit
	577	fi
	578
	579
	580	# HOST-IDENTIFIER (local_host) AUS KONFIGURATIONSDATEI BESTIMMEN
	581	line=""
	582	grep "%host_identifier" $config_file > tmp_mrun
	583	while read line
	584	do
[206]	585	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
[82]	586	then
	587	HOSTNAME=`echo $line \| cut -d" " -s -f2`
	588	host_identifier=`echo $line \| cut -d" " -s -f3`
[83]	589	if [[ $localhost_realname = $HOSTNAME ]]
[82]	590	then
	591	localhost=$host_identifier
	592	break
	593	fi
	594	fi
	595	done < tmp_mrun
	596
	597	if [[ "$localhost" = "" ]]
	598	then
	599	printf "\n\n +++ no host identifier found in configuration file \"$config_file\""
	600	printf "\n for local host \"$localhost_realname\"."
	601	printf "\n Please add line"
	602	printf "\n \"\%host_identifier $localhost_realname <identifier>\""
	603	printf "\n to the configuration file."
	604	locat=localhost; exit
	605	fi
	606
	607
	608	# HOSTSPEZIFISCHE VARIABLEN SETZEN
	609	case $localhost_realname in
[397]	610	(r1\|r2\|h01\|b01) archive_system=tivoli;;
[82]	611	(cs*) archive_system=ut;;
	612	(fimm.bccs.uib.no) fimm=true;;
	613	(gate\|n-sx) PATH=$PALM_BIN:$PATH:/usr/bin/nqsII;;
	614	(scirocco) scirocco=true;;
	615	esac
	616
	617
	618
[1]	619	# BASISNAME DER INPUT-DATEIEN GLEICH ALLGEMEINEM BASISNAMEN SETZEN,
	620	# WENN NICHT VOM BENUTZER ANDERS BESTIMMT
	621	[[ "$afname" = "" ]] && afname=$fname
	622
	623
	624	# EVTL. RUN-MODUS DEN I/O-LISTEN HINZUFUEGEN
	625	if [[ "$run_mode" != "" ]]
	626	then
	627	input_list="$input_list $run_mode"
	628	output_list="$output_list $run_mode"
	629	fi
	630
	631
	632	# RECHNERNAMEN ABSPEICHERN, VON DEM AUS JOB GESTARTET WIRD,
	633	# ALLERDINGS NUR DANN, WENN NICHT PER OPTION -H BEREITS EIN WERT
	634	# ZUGEWIESEN WURDE (MRUN MACHT DIES IMMER, WENN ES SELBST BATCH-JOBS
	635	# STARTET)
	636	if [[ "$fromhost" = "" ]]
	637	then
	638	fromhost=$localhost
	639	fi
	640
	641
	642	# PRUEFEN, OB MRUN NUR TESTWEISE AUF DER LOKALEN MASCHINE KOMPILIEREN SOLL
	643	if [[ "$source_list" = LOCAL_COMPILE_TEST ]]
	644	then
	645	source_list=TEST
	646	local_compile=true
	647	host=$localhost
	648	fi
	649
	650
	651	# PRUEFEN, OB AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL
	652	# WERT VON do_remote WIRD FUER DATEIVERBINDUNGEN BENOETIGT.
	653	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
	654	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
	655	if [[ -n $host && "$host" != $localhost ]]
	656	then
	657	do_batch=true
	658	do_remote=true
	659	case $host in
[440]	660	(ibm\|ibmb\|ibmh\|ibms\|ibmy\|nech\|necriam\|lckyoto\|lcsgib\|lcsgih\|lctit\|unics\|lcxt4\|lcxt5m\|lck) true;;
[1]	661	(*) printf "\n"
[83]	662	printf "\n +++ sorry: execution of batch jobs on remote host \"$host\""
	663	printf "\n is not available"
[1]	664	locat=nqs; (( iec = 0 )); exit;;
	665	esac
	666	else
	667	host=$localhost
	668	fi
	669
	670
	671	# ZUSATZBEDINGUNGEN (OPTION -K) AUSWERTEN
	672	if [[ -n $additional_conditions ]]
	673	then
[69]	674	# echo $additional_conditions \| cut -d" " -f1-3 \| read cond1 cond2 dummy
	675	cond1=`echo $additional_conditions \| cut -d" " -f1`
	676	cond2=`echo $additional_conditions \| cut -d" " -s -f2`
	677	dummy=`echo $additional_conditions \| cut -d" " -s -f3`
[1]	678	if [[ -n $dummy ]]
	679	then
	680	printf "\n +++ more than 2 additional conditions given for Option \"-K\""
	681	locat=options; exit
	682	fi
[503]	683	block=_$cond1
	684	[[ -n $cond2 ]] && block=${block}_$cond2
[1]	685	fi
	686
	687
[206]	688	# KOPPLUNGSEIGENSCHAFTEN (-Y) AUSWERTEN UND coupled_mode BESTIMMEN
	689	if [[ $run_coupled_model = true ]]
	690	then
	691
	692	if [[ -n $coupled_dist ]]
	693	then
	694
	695	numprocs_atmos=`echo $coupled_dist \| cut -d" " -s -f1`
	696	numprocs_ocean=`echo $coupled_dist \| cut -d" " -s -f2`
	697
	698	if (( $numprocs_ocean + $numprocs_atmos != $numprocs ))
	699	then
	700
	701	printf "\n +++ number of processors does not fit to specification by \"-Y\"."
	702	printf "\n PEs (total) : $numprocs"
	703	printf "\n PEs (atmosphere): $numprocs_atmos"
	704	printf "\n PEs (ocean) : $numprocs_ocean"
	705	locat=coupling; exit
	706
	707	# REARRANGING BECAUSE CURRENTLY ONLY 1:1 TOPOLOGIES ARE SUPPORTED
	708	# THIS SHOULD BE REMOVED IN FUTURE
	709	elif (( $numprocs_ocean != $numprocs_atmos ))
	710	then
	711
	712	printf "\n +++ currently only 1:1 topologies are supported"
	713	printf "\n PEs (total) : $numprocs"
	714	printf "\n PEs (atmosphere): $numprocs_atmos"
	715	printf "\n PEs (ocean) : $numprocs_ocean"
	716	(( numprocs_atmos = $numprocs / 2 ))
	717	(( numprocs_ocean = $numprocs / 2 ))
	718	printf "\n +++ rearranged topology to $numprocs_atmos:$numprocs_ocean"
	719
	720	fi
	721
	722	else
	723
	724	(( numprocs_ocean = $numprocs / 2 ))
	725	(( numprocs_atmos = $numprocs / 2 ))
	726
	727	fi
	728	coupled_dist=`echo "$numprocs_atmos $numprocs_ocean"`
	729
	730	# GET coupled_mode FROM THE CONFIG FILE
	731	line=""
	732	grep "%cpp_options.-D__mpi2.$host" $config_file > tmp_mrun
	733	while read line
	734	do
	735	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" && ( $(echo $line \| cut -d" " -s -f4) = $cond1 \|\| $(echo $line \| cut -d" " -s -f4) = $cond2 ) ]]
	736	then
	737	coupled_mode="mpi2"
	738	fi
	739	done < tmp_mrun
	740
	741	fi
	742
	743
[1]	744	# PRUEFEN, OB EVTL. BEI VORHERGEHENDEM LAUF (KETTENJOB) EINE
	745	# ARCHIVIERUNG FEHLGESCHLAGEN IST
	746	if [[ -f ~/job_queue/ARCHIVE_ERROR_$fname ]]
	747	then
	748	if [[ $ignore_archive_error = false ]]
	749	then
	750	printf "\n +++ data archiving of previous run failed"
	751	printf "\n see directory \~/job_queue on remote machine"
	752	locat=archive; exit
	753	else
	754	printf "\n +++ warning: data archiving in a previous run failed"
	755	printf "\n MRUN continues, trying to get backup copy"
	756	fi
	757	fi
	758
	759
	760
	761	# LESEN UND INTERPRETIEREN DER KONFIGURATIONS-DATEI VOM SHELLSCRIPT AUS
	762	# VORUEBERGEHEND ZWINGEND AUF LINUX-RECHNERN
	763	if [[ "$read_from_config" = false ]]
	764	then
	765
	766	[[ $silent = false ]] && printf "\n Reading the configuration file... "
	767	while read zeile
	768	do
	769	[[ $silent = false ]] && printf "."
	770
	771
	772	# ZUERST EVENTUELL VORKOMMENDE ENVIRONMENT-VARIABLEN DURCH IHRE WERTE
	773	# ERSETZEN
	774	eval zeile=\"$zeile\"
	775
	776
	777	# INTERPRETATION DER ZEILE
[21]	778	if [[ "$(echo $zeile)" = "" ]]
[1]	779	then
[21]	780	# LEERZEILE, KEINE AKTION
	781	continue
[1]	782
[21]	783	elif [[ "$(echo $zeile \| cut -c1)" = "#" ]]
	784	then
	785
[1]	786	# ZEILE IST KOMMENTARZEILE
	787	true
	788
	789	elif [[ "$(echo $zeile \| cut -c1)" = "%" ]]
	790	then
	791
	792	# ZEILE DEFINIERT ENVIRONMENT-VARIABLE
	793	zeile=$(echo $zeile \| cut -c2-)
[69]	794	# echo $zeile \| cut -d" " -f1-5 \| read var value for_host for_cond1 for_cond2
	795	var=`echo $zeile \| cut -d" " -f1`
	796	value=`echo $zeile \| cut -d" " -s -f2`
	797	for_host=`echo $zeile \| cut -d" " -s -f3`
	798	for_cond1=`echo $zeile \| cut -d" " -s -f4`
	799	for_cond2=`echo $zeile \| cut -d" " -s -f5`
[1]	800
	801	if [[ "$for_host" = "" \|\| ( "$for_host" = $host && "$for_cond1" = "$cond1" && "$for_cond2" = "$cond2" ) \|\| $(echo "$input_list$output_list"\|grep -c "$for_host") != 0 ]]
	802	then
	803
	804	# BEI COMPILER- CPP- ODER LINKEROPTIONEN EVTL ":" DURCH " "
	805	# ERSETZEN. "::" WIRD DURCH ":" ERSETZT.
	806	value=`echo $value \| sed 's/::/%DUM%/g' \| sed 's/:/ /g' \| sed 's/%DUM%/:/g'`
	807
	808
	809	# ENVIRONMENT-VARIABLE WIRD WERT AUS KONFIGURATIONSDATEI
	810	# ZUGEWIESEN, WENN SIE SELBST NOCH KEINEN WERT UEBER DIE
	811	# ENTSPRECHENDE SCRIPT-OPTION ERHALTEN HAT. SOLCHE
	812	# VARIABLEN HAETTEN DANN DEN WERT "" ODER IM INTEGER-FALL DEN
	813	# WERT 0. ALLGEMEINE REGEL ALSO: SCRIPT-OPTION GEHT UEBER
	814	# KONFIGURATIONSDATEI
	815	if [[ "$(eval echo \$$var)" = "" \|\| "$(eval echo \$$var)" = "0" ]]
	816	then
	817	eval $var=\$value
	818
	819	# EVTL. BILDSCHIRMAUSGABEN DER ENVIRONMENT-VARIABLEN
	820	if [[ $do_trace = true ]]
	821	then
	822	printf "\n*** ENVIRONMENT-VARIABLE $var = $value"
	823	fi
	824	fi
	825
	826	# WENN ENVIRONMENT-VARIABLE HOST VEREINBART, DANN SOFORT AUSWERTEN
	827	# WERT VON do-remote WIRD BEI DATEIVERBINDUNGEN BENOETIGT
	828	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
	829	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
	830	if [[ $var = host ]]
	831	then
	832	if [[ -n $host && "$host" != $localhost ]]
	833	then
	834	do_batch=true
	835	do_remote=true
	836	case $host in
[440]	837	(ibm\|ibms\|ibmy\|lckyoto\|lcsgib\|lcsgih\|lctit\|nech\|necriam\|unics\|lcxt4\|lcxt5m\|lck) true;;
[83]	838	(*) printf "\n +++ sorry: execution of batch jobs on remote host \"$host\""
	839	printf "\n is not available"
[1]	840	locat=nqs; exit;;
	841	esac
	842	else
	843	host=$localhost
	844	fi
	845	fi
	846
	847	# VOM BENUTZER DEFINIERTE ENVIRONMENT VARIABLEN MUESSEN PRINZIPIELL
	848	# EXPORTIERT WERDEN, DA SIE VIELLEICHT IN WEITER UNTEN AUFZURUFEN-
	849	# DEN PROGRAMMEN BENOETIGT WERDEN
	850	export $var
	851	fi
	852
	853
	854
	855
	856	elif [[ "$(echo $zeile \| cut -c1-3)" = "EC:" ]]
	857	then
	858
	859	# ZEILE DEFINIERT ERROR-KOMMANDO
	860	(( iec = iec + 1 ))
	861	zeile=$(echo $zeile \| cut -c4-)
	862	err_command[$iec]="$zeile"
	863
	864	elif [[ "$(echo $zeile \| cut -c1-3)" = "IC:" ]]
	865	then
	866
	867	# ZEILE DEFINIERT INPUT-KOMMANDO
	868	(( iic = iic + 1 ))
	869	zeile=$(echo $zeile \| cut -c4-)
	870	in_command[$iic]="$zeile"
	871
	872	elif [[ "$(echo $zeile \| cut -c1-3)" = "OC:" ]]
	873	then
	874
	875	# ZEILE DEFINIERT OUTPUT-KOMMANDO
	876	(( ioc = ioc + 1 ))
	877	zeile=$(echo $zeile \| cut -c4-)
	878	out_command[$ioc]="$zeile"
	879
	880	else
	881
	882	# ZEILE DEFINIERT DATEIVERBINDUNG. EINLESEN DER DATEIEIGENSCHAFTEN
	883	# s2a: in/out - Feld
	884	# s2b: loc - Feld (optional)
	885	# s2c: tr/ar - Feld (optional)
[69]	886	# echo $zeile \| cut -d" " -f1-2 \| read s1 s2
	887	s1=`echo $zeile \| cut -d" " -f1`
	888	s2=`echo $zeile \| cut -d" " -s -f2`
[1]	889	s2a=$(echo $s2 \| cut -d":" -f1)
	890	if [[ $(echo $s2 \| grep -c ":") = 0 ]]
	891	then
	892	s2b=""
	893	s2c=""
	894	else
[69]	895	# echo $s2 \| cut -d":" -f2-3 \| sed 's/:/ /g' \| read s2b s2c
	896	s2b=`echo $s2 \| cut -d":" -f2 \| sed 's/:/ /g'`
	897	s2c=`echo $s2 \| cut -d":" -s -f3 \| sed 's/:/ /g'`
[1]	898	fi
[69]	899	# echo $zeile \| cut -d" " -f3-6 \| read s3 s4 s5 s6
	900	s3=`echo $zeile \| cut -d" " -f3`
	901	s4=`echo $zeile \| cut -d" " -s -f4`
	902	s5=`echo $zeile \| cut -d" " -s -f5`
	903	s6=`echo $zeile \| cut -d" " -s -f6`
[1]	904
	905
	906	# ABSPEICHERN DER DATEIVERBINDUNG, FALLS IN INPUT- ODER OUTPUT-LIST
	907	# VERMERKT. VARIABLE S3 KANN AUCH LISTE ENTHALTEN (FELDTRENNER ":")
	908	# DATEIVERBINDUNG WIRD DANN NICHT ABGESPEICHERT UND GEPRUEFT, WENN
	909	# PROGRAMMLAUF AUF REMOTE-MASCHINE ERFOLGT UND DATEI NUR LOKAL VOR-
	910	# HANDEN SEIN MUSS (D.H. s2b = loc)
	911	IFSALT="$IFS"; IFS="$IFS:"
	912	if [[ "$s2a" = in && ! ( $do_remote = true && ( "$s2b" = loc \|\| "$s2b" = locopt ) ) ]]
	913	then
	914	found=false
	915	for actual in $input_list
	916	do
	917	for formal in $s3
	918	do
	919	[[ $actual = $formal \|\| "$formal" = "-" ]] && found=true
	920	done
	921	done
	922	if [[ $found = true ]]
	923	then
	924	(( iin = iin + 1 ))
	925	localin[$iin]=$s1; transin[$iin]=$s2b; actionin[$iin]=$s2c;
	926	typein[$iin]=$s3; pathin[$iin]=$s4; endin[$iin]=$s5;
	927	extin[$iin]=$s6
	928	fi
	929	elif [[ "$s2a" = out && ! ( $do_remote = true && "$s2b" = loc ) ]]
	930	then
	931	found=false
	932	for actual in $output_list
	933	do
	934	for formal in $s3
	935	do
	936	[[ $actual = $formal \|\| "$formal" = "-" ]] && found=true
	937	done
	938	done
	939	if [[ $found = true ]]
	940	then
	941	(( iout = iout + 1 ))
	942	localout[$iout]=$s1; actionout[$iout]=$s2c; typeout[$iout]=$s3;
	943	pathout[$iout]=$s4; endout[$iout]=$s5; extout[$iout]=$s6
	944	fi
	945	elif [[ "$s2a" != in && "$s2a" != out ]]
	946	then
	947	printf "\n +++ I/O-attribute in configuration file $config_file has the invalid"
	948	printf "\n value \"$s2\". Only \"in\" and \"out\" are allowed!"
	949	locat=connect; exit
	950	fi
	951	IFS="$IFSALT"
	952	fi
	953	done < $config_file
	954
	955	else
	956
	957
	958	# INTERPRETATION DER KONFIGURATIONSDATEI MITTELS FORTRAN 90 - PROGRAMM
	959	[[ $silent = false ]] && printf "..."
	960	export cond1 cond2 config_file do_remote do_trace input_list localhost output_list
	961	export interpreted_config_file=.icf.$RANDOM
	962
	963
[69]	964
	965	# ENVIRONMENT-VARIABLEN FUER INTERPRET_CONFIG UEBER NAMELIST_DATEI ZUR
	966	# VERFUEGUNG STELLEN
	967	cat > .mrun_environment << %%END%%
	968	&mrun_environment cond1 = '$cond1', cond2 = '$cond2',
	969	config_file = '$config_file', do_remote = '$do_remote',
	970	do_trace = '$do_trace', host = '$host',
	971	input_list = '$input_list', icf = '$interpreted_config_file',
	972	localhost = '$localhost', output_list = '$output_list' /
	973
	974	%%END%%
	975
	976	# WERTE VON MRUN-OPTIONEN SICHERN UND DAMIT GEGEBENENFALLS SPAETER DIE
	977	# IN DER KONFIGURAIONSDATEI ANGEGEBENEN WERTE UEBERSTEUERN
	978	mrun_memory=$memory
[127]	979	mrun_group_number=$group_number
[69]	980	mrun_cpumax=$cpumax
	981	mrun_numprocs=$numprocs
	982
[251]	983	if [[ $localhost_realname = "sx-fep" ]]
[66]	984	then
[251]	985	/home/COAR/NC/raasch/pub/interpret_config_necriam.x
[66]	986	else
[503]	987
	988	if [[ "$host" != $localhost ]]
	989	then
	990
	991	# REMOTE JOB FROM LOCAL HOST: JUST TAKE THE FIRST EXECUTABLE FOUND
	992	interpret_config_executable=`ls -1 ${PALM_BIN}/interpret_config*.x 2>/dev/null`
	993	if [[ $? != 0 ]]
	994	then
	995	printf "\n\n +++ no interpret_config found"
	996	printf "\n run \"mbuild -u -h ...\" to generate utilities for this host"
	997	locat=interpret_config; exit
	998	fi
	999	interpret_config_executable=`echo $interpret_config_executable \| cut -d" " -f1`
	1000	$interpret_config_executable
	1001
	1002	else
	1003
	1004	# CHECK, IF THERE IS AN EXECUTABLE FOR THE BLOCK
	1005	if [[ ! -f ${PALM_BIN}/interpret_config${block}.x ]]
	1006	then
	1007	printf "\n\n +++ no interpret_config found for given block \"$cond1 $cond2\""
	1008	printf "\n run \"mbuild -u -h ...\" to generate utilities for this block"
	1009	locat=interpret_config; exit
	1010	else
	1011	interpret_config${block}.x
	1012	fi
	1013
	1014	fi
[66]	1015	fi
[71]	1016	rm .mrun_environment
[1]	1017
[71]	1018
[1]	1019	# AUSFUEHRUNG DER GENERIERTEN SHELL-KOMMANDOS IN DIESER SHELL
	1020	chmod u+x $interpreted_config_file
	1021	export PATH=$PATH:.
	1022	. $interpreted_config_file
[71]	1023	rm $interpreted_config_file
[1]	1024
[71]	1025
[69]	1026	# OPTIONSWERTE UEBERSTEUERN KONFIGURATIONSDATEI
[71]	1027	[[ $mrun_memory != 0 ]] && memory=$mrun_memory
[127]	1028	[[ "$mrun_group_number" != "none" ]] && group_number=$mrun_group_number
[71]	1029	[[ $mrun_cpumax != 0 ]] && cpumax=$mrun_cpumax
	1030	[[ "$mrun_numprocs" != "" ]] && numprocs=$mrun_numprocs
[69]	1031
[1]	1032	fi
	1033
	1034
	1035	# QUELLTEXTVERZEICHNIS AUF LOKALER MASCHINE AUS KONFIGURATIONSDATEI
	1036	# BESTIMMEN (WUERDE SONST EVTL. DAS VERZEICHNIS DES JEWEILS UNTER -h
	1037	# ANGEGEBENEN REMOTE-RECHNERS SEIN)
	1038	# BEI BATCH-JOBS SIND DIE ZU UEBERSETZENDEN PROGRAMMTEILE SCHON KOMPLETT
	1039	if [[ "$SOURCES_COMPLETE" = "" ]]
	1040	then
	1041
	1042	# ZUERST PRUEFEN, OB EIN GLOBALER QUELLTEXTPFAD FUER ALLE RECHNER
	1043	# VEREINBART WURDE
	1044	source_path=""
	1045	line=""
	1046	grep "%source_path" $config_file > tmp_mrun
	1047	while read line
	1048	do
	1049	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
	1050	then
	1051	if [[ "$(echo $line \| cut -d" " -f3)" = "" ]]
	1052	then
	1053	global_source_path=`echo $line \| cut -d" " -f2`
	1054	fi
	1055	fi
	1056	done < tmp_mrun
	1057
	1058	line=""
	1059	found=false
	1060	grep " $localhost" $config_file \| grep "%source_path" > tmp_mrun
	1061	while read line
	1062	do
	1063	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
	1064	then
	1065	if [[ $found = true ]]
	1066	then
	1067	printf "\n\n +++ more than one source path found in configuration file"
	1068	printf "\n for local host \"$localhost\" "
	1069	locat=source_path; exit
	1070	fi
	1071	source_path=`echo $line \| cut -d" " -f2`
	1072	found=true
	1073	fi
	1074	done < tmp_mrun
	1075	rm tmp_mrun
	1076
	1077	if [[ "$source_path" = "" ]]
	1078	then
	1079	if [[ "$global_source_path" != "" ]]
	1080	then
	1081	source_path=$global_source_path
	1082	else
	1083	printf "\n\n +++ no source path found in configuration file"
	1084	printf "\n for local host \"$localhost\" "
	1085	locat=source_path; exit
	1086	fi
	1087	fi
	1088	eval source_path=$source_path
	1089
	1090	if [[ ! -d $source_path ]]
	1091	then
	1092	printf "\n\n +++ source path \"$source_path\" on local host"
	1093	printf "\n \"$localhost\" does not exist"
	1094	locat=source_path; exit
	1095	fi
	1096
	1097	fi
	1098
	1099
[78]	1100	# GLOBALE REVISIONSNUMMER ERMITTELN (FORTSETZUNGSLAEUFEN WIRD DIESE
	1101	# DURCH OPTION -G MITGETEILT)
	1102	if [[ "$global_revision" = "" ]]
	1103	then
	1104	global_revision=`svnversion $source_path 2>/dev/null`
	1105	global_revision="Rev: $global_revision"
	1106	fi
[1]	1107
[78]	1108
[1]	1109	# NOCHMAL PRUEFEN, OB AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL
	1110	# (HOST KANN IN KONFIGURATIONSDATEI ANDERS FESTGELEGT WORDEN SEIN)
	1111	# WERT VON do_remote WIRD FUER DATEIVERBINDUNGEN BENOETIGT.
	1112	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
	1113	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
	1114	if [[ -n $host && "$host" != $localhost ]]
	1115	then
	1116	do_batch=true
	1117	do_remote=true
	1118	case $host in
[440]	1119	(ibm\|ibmb\|ibmh\|ibms\|ibmy\|lckyoto\|lcsgib\|lcsgih\|lctit\|nech\|necriam\|unics\|lcxt4\|lcxt5m\|lck) true;;
[1]	1120	(*) printf "\n"
[83]	1121	printf "\n +++ sorry: execution of batch jobs on remote host \"$host\""
	1122	printf "\n is not available"
[1]	1123	locat=nqs; (( iec = 0 )); exit;;
	1124	esac
	1125	else
	1126	host=$localhost
	1127	fi
	1128
	1129
	1130	# PRUEFUNG EINIGER PROZESSORZAHLANGABEN BEI RECHNUNGEN AUF PARALLELRECHNERN
	1131	if [[ "$cond1" = parallel \|\| "$cond2" = parallel ]]
	1132	then
	1133
	1134	# PRUEFEN, OB DIE ANZAHL DER ZU VERWENDENDEN PES ANGEGEBEN WURDE
	1135	if [[ ! -n $numprocs ]]
	1136	then
	1137	printf "\n"
	1138	printf "\n +++ option \"-K parallel\" requires additional specification"
	1139	printf "\n of the number of processors to be used by"
	1140	printf "\n mrun-option \"-X\" or by environment-variable"
	1141	printf "\n \"numprocs\" in the configuration file"
	1142	locat=numprocs; (( iec = 0 )); exit
	1143	fi
	1144
	1145	# PRUEFEN, OB DIE PROZESSORANZAHL PRO KNOTEN ANGEGEBEN WURDE (GGF.
	1146	# DEFAULT-WERT SETZEN) UND OB SIE EIN GANZZAHLIGER TEILER DER
	1147	# GESAMTPROZESSORANZAHL IST
[251]	1148	if [[ $host = nech \|\| $host = necriam \|\| $host = ibmh \|\| $host = ibmb \|\| $host = ibms ]]
[1]	1149	then
	1150	[[ "$tasks_per_node" = "" ]] && tasks_per_node=6
	1151	(( ival = $tasks_per_node ))
	1152	(( pes = numprocs ))
	1153	# if [[ $(echo $package_list \| grep -c dvrp_graphics+1PE) = 1 ]]
	1154	# then
	1155	# (( pes = pes - 1 ))
	1156	# fi
	1157	(( ii = pes / ival ))
	1158	if (( pes - ii * ival > 0 ))
	1159	then
	1160	printf "\n"
	1161	printf "\n +++ tasks per node (option \"-T\") must be an integral"
	1162	printf "\n divisor of the total number of processors (option \"-X\")"
	1163	printf "\n values of this mrun-call: \"-T $tasks_per_node\" \"-X $numprocs\""
	1164	locat=tasks_per_node; (( iec = 0 )); exit
	1165	fi
	1166	fi
	1167
	1168	# IBMY HAT NUR EINEN KNOTEN
	1169	if [[ $host = ibmy ]]
	1170	then
	1171	if [[ "$tasks_per_node" != "" && "$tasks_per_node" != "$numprocs" ]]
	1172	then
	1173	printf "\n"
	1174	printf "\n +++ on ibmy, tasks per node (option \"-T\") must be equal to the"
	1175	printf "\n total number of processors (option \"-X\")"
	1176	printf "\n values of this mrun-call: \"-T $tasks_per_node\" \"-X $numprocs\""
	1177	locat=tasks_per_node; (( iec = 0 )); exit
	1178	fi
	1179	fi
	1180
	1181	# FALLS OPENMP PARALLELISIERUNG VERWENDET WERDEN SOLL, ANZAHL VON THREADS
	1182	# SETZEN UND ZAHL DER TASKS PRO KNOTEN AUF 1 SETZEN
	1183	if [[ $use_openmp = true ]]
	1184	then
	1185	threads_per_task=$tasks_per_node
	1186	tasks_per_node=1
	1187	fi
[377]	1188
	1189	# SETTINGS FOR SUBJOB-COMMAND
	1190	if [[ $(echo $host \| cut -c1-5) = lcsgi ]]
	1191	then
	1192	(( tp1 = tasks_per_node * threads_per_task ))
	1193	TOPT="-T $tp1"
	1194	else
	1195	TOPT="-T $tasks_per_node"
	1196	fi
[1]	1197	OOPT="-O $threads_per_task"
	1198
	1199	# GESAMTZAHL DER KNOTEN BESTIMMEN
	1200	if [[ "$tasks_per_node" != "" ]]
	1201	then
	1202	(( nodes = numprocs / ( tasks_per_node * threads_per_task ) ))
	1203	fi
	1204
	1205	# PRUEFEN, OB NODE USAGE EINEN ERLAUBTEN WERT HAT BZW. DEN DEFAULT
	1206	# SETZEN
	1207	if [[ $node_usage = default ]]
	1208	then
	1209	if [[ $host = ibms ]]
	1210	then
	1211	node_usage=shared
[118]	1212	elif [[ $host = lctit ]]
	1213	then
[265]	1214	node_usage=RAM64GB
[181]	1215	elif [[ $(echo $host \| cut -c1-5) = lcsgi ]]
	1216	then
	1217	node_usage=singlejob
[1]	1218	else
	1219	node_usage=not_shared
	1220	fi
	1221	fi
[181]	1222
[265]	1223	if [[ $node_usage != shared && $node_usage != not_shared && $node_usage != singlejob && "$(echo $node_usage \| cut -c1-3)" != "sla" && $node_usage != RAM64GB ]]
[1]	1224	then
	1225	printf "\n"
	1226	printf "\n +++ node usage (option \"-n\") is only allowed to be set"
	1227	printf "\n \"shared\" or \"not_shared\""
	1228	locat=tasks_per_node; (( iec = 0 )); exit
	1229	fi
	1230
	1231	fi
	1232
	1233	# PRUEFEN, OB HOSTFILE EXISTIERT
	1234	if [[ -n $hostfile ]]
	1235	then
	1236	if [[ ! -f $hostfile ]]
	1237	then
	1238	printf "\n"
	1239	printf "\n +++ hostfile \"$hostfile\" does not exist"
	1240	locat=hostfile; exit
	1241	fi
	1242	fi
	1243
	1244	# PRUEFEN, OB RHOSTS DATEI EXISTIERT. GEGEBENENFALLS ANLEGEN BZW. ERWEITERN
	1245	if [[ $host = ibmy && $do_remote = false ]]
	1246	then
	1247	if [[ ! -f $HOME/.rhosts ]]
	1248	then
	1249	echo "gfdl5.yonsei.ac.kr" > $HOME/.rhosts
	1250	printf "\n\n *** file:"
	1251	printf "\n $HOME/.rhosts"
	1252	printf "\n was created\n"
	1253	fi
	1254	if [[ $(grep -c gfdl5.yonsei.ac.kr $HOME/.rhosts) = 0 ]]
	1255	then
	1256	echo "gfdl5.yonsei.ac.kr" >> $HOME/.rhosts
	1257	printf "\n\n *** file:"
	1258	printf "\n $HOME/.rhosts"
	1259	printf "\n was extended by the name of the current host\n"
	1260	fi
	1261	fi
	1262
	1263
	1264
	1265	# FALLS NICHT VORGEGEBEN, DEFAULT-QUEUE AUF DER ZIELMASCHINE FESTLEGEN
	1266	if [[ $queue = none ]]
	1267	then
	1268	case $host in
	1269	(ibmb) if [[ $node_usage = shared ]]
	1270	then
	1271	queue=cshare
	1272	else
	1273	queue=csolo
	1274	fi;;
[312]	1275	(ibmh) queue=no_class;;
[1]	1276	(ibmy) queue=parallel;;
[440]	1277	(lckyoto) queue=ph;;
[191]	1278	(lcsgib) queue=bigq;;
	1279	(lcsgih) queue=bigq;;
[265]	1280	(lctit) queue=RAM64GB;;
[1]	1281	(nech) queue=none;;
[253]	1282	(necriam) queue=SP;;
[1]	1283	(unics) queue=unics;;
	1284	esac
	1285	fi
	1286
	1287
	1288	# VOLLSTAENDIGE DATEINAMEN DER INPUT-FILES BILDEN,
	1289	# INPUT-DATEIEN AUF VORHANDENSEIN PRUEFEN UND EVTL. HOECHSTE ZYKLUSNUMMER
	1290	# ERMITTELN
	1291	(( i = 0 ))
	1292	while (( i < iin ))
	1293	do
	1294	(( i = i + 1 ))
	1295	(( maxcycle = 0 ))
	1296
	1297	# NAMENSBILDUNG (EVTL. IST FESTER DATEINAME VORGEGEBEN)
	1298	if [[ "${actionin[$i]}" = di ]]
	1299	then
	1300	remotepathin[$i]=${pathin[$i]}/${endin[$i]} # REMOTE-PFAD ERST AUF
	1301	# REM-MASCHINE AUSWERTEN
	1302	eval filename=${pathin[$i]}/${endin[$i]}
	1303	else
	1304	remotepathin[$i]=${pathin[$i]}/${afname}${endin[$i]} # REMOTE-PFAD ERST AUF
	1305	# REM-MASCHINE AUSWERTEN
	1306	eval filename=${pathin[$i]}/${afname}${endin[$i]}
	1307	fi
	1308
	1309	# PRUEFEN AUF VORHANDENSEIN
	1310	if [[ $(ls $filename* 2>&1 \| grep -c "not found") = 1 \|\| \
	1311	$(ls $filename* 2>&1 \| grep -c "No such file") = 1 \|\| \
	1312	$(ls $filename* 2>&1 \| grep -c "does not exist") = 1 ]]
	1313	then
	1314	# DATEIEN MIT EXTENSION (Z.B. NC) MUESSEN NICHT ZWINGEND VORHANDEN
	1315	# SEIN, DESHALB IN SOLCHEN FAELLEN KEIN ABBRUCH. DIES IST NUR EINE
	1316	# VORUEBERGEHENDE LOESUNG (OKT 05). NICHT ZWINGEND BENOETIGTE
	1317	# EINGABEDATEIEN SOLLTEN EINE SPEZIELLE OPTION IN DER DATEI-
	1318	# VERBINDUNGSANWEISUNG BEKOMMEN (Z.B. inopt?)
	1319	if [[ "${transin[$i]}" != "locopt" ]]
	1320	then
	1321	printf "\n\n +++ INPUT-file: "
	1322	if [[ "${extin[$i]}" = "" ]]
	1323	then
	1324	printf "\n $filename"
	1325	else
	1326	printf "\n $filename.${extin[$i]}"
	1327	fi
	1328	printf "\n does not exist\n"
	1329	locat=input; exit
	1330	else
	1331	transin[$i]="unavailable"
	1332	fi
	1333	else
	1334
	1335	# ZYKLUSNUMMER FESTSTELLEN
	1336	ls -1 -d $filename > filelist 2>/dev/null
	1337	ls -1 -d $filename.* >> filelist 2>/dev/null
	1338	while read zeile
	1339	do
	1340	cycle=$(print $zeile \| cut -f2 -d".")
	1341	if [[ "$cycle" = "$zeile" ]]
	1342	then
	1343	(( icycle = 0 ))
	1344	elif [[ "$cycle" = "${extin[$i]}" ]]
	1345	then
	1346	(( icycle = 0 ))
	1347	else
	1348	(( icycle = $cycle ))
	1349	fi
	1350	if (( icycle > maxcycle ))
	1351	then
	1352	(( maxcycle = icycle ))
	1353	file_to_be_used=$zeile
	1354	fi
	1355	done <filelist
	1356	rm filelist
	1357
	1358	# EVTL. ZYKLUSNUMMER AN DATEINAMEN ANFUEGEN
	1359	if (( maxcycle > 0 ))
	1360	then
	1361	if [[ "${extin[$i]}" != " " && "${extin[$i]}" != "" ]]
	1362	then
	1363	filename=${filename}.$maxcycle.${extin[$i]}
	1364	else
	1365	filename=${filename}.$maxcycle
	1366	fi
	1367	else
	1368	if [[ "${extin[$i]}" != " " && "${extin[$i]}" != "" ]]
	1369	then
	1370	filename=${filename}.${extin[$i]}
	1371	fi
	1372	fi
	1373
	1374	# DATEINAMEN OHNE PFAD ABER MIT ZYKLUSNUMMER ABSPEICHERN,
	1375	# DA SPAETER BEI RUECKSPEICHERN VOM ARCHIVSYSTEM EVTL. BENOETIGT
	1376	absnamein[$i]=$filename
	1377	if (( maxcycle > 0 ))
	1378	then
	1379	if [[ "${actionin[$i]}" = di ]]
	1380	then
	1381	frelin[$i]=${endin[$i]}.$maxcycle
	1382	else
	1383	frelin[$i]=${afname}${endin[$i]}.$maxcycle
	1384	fi
	1385	else
	1386	if [[ "${actionin[$i]}" = di ]]
	1387	then
	1388	frelin[$i]=${endin[$i]}
	1389	else
	1390	frelin[$i]=${afname}${endin[$i]}
	1391	fi
	1392	fi
	1393
	1394	fi
	1395	done
	1396
	1397
	1398	# VOLLSTAENDIGE DATEINAMEN (OHNE $ ODER ~) DER OUTPUT-FILES BILDEN,
	1399	# OUTPUT-DATEIEN AUF VORHANDENSEIN PRUEFEN UND EVTL. HOECHSTE ZYKLUSNUMMER
	1400	# ERMITTELN ODER, FALLS NICHT VORHANDEN, PRUEFEN, OB SIE SICH ANLEGEN LASSEN
	1401	# DIESE AKTIONEN FINDEN NICHT STATT, WENN PROGRAMM AUF REMOTE-MASCHINE
	1402	# RECHNET UND DATEI ANSCHLIESSEND TRANSFERIERT WERDEN SOLL!
	1403	(( i = 0 ))
	1404	while (( i < iout ))
	1405	do
	1406	(( i = i + 1 ))
	1407	if [[ ! ( $fromhost != $localhost && ( "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = tra \|\| "${actionout[$i]}" = trpe ) ) ]]
	1408	then
[260]	1409	if [[ "${actionout[$i]}" = tr ]]
[1]	1410	then
	1411	actionout[$i]=""
[260]	1412	elif [[ "${actionout[$i]}" = trpe ]]
	1413	then
	1414	actionout[$i]=pe
[1]	1415	elif [[ "${actionout[$i]}" = tra ]]
	1416	then
	1417	actionout[$i]=a
	1418	fi
	1419	(( maxcycle = 0 ))
	1420	eval filename=${pathout[$i]}/${fname}${endout[$i]}
	1421	eval catalogname=${pathout[$i]}
	1422	if [[ $(ls $filename* 2>&1 \| grep -c "not found") = 1 \|\| \
	1423	$(ls $filename* 2>&1 \| grep -c "No such file") = 1 \|\| \
	1424	$(ls $filename* 2>&1 \| grep -c "does not exist") = 1 ]]
	1425	then
	1426
	1427	# OUTPUT-DATEI NICHT VORHANDEN. PRUEFEN, OB ANLEGEN MOEGLICH.
	1428	if cat /dev/null > $filename
	1429	then
	1430	rm $filename
	1431	else
	1432
	1433	# PRUEFEN, OB KATALOG VORHANDEN UND EVTL. DIESEN ANLEGEN
	1434	if [[ ! -d $catalogname ]]
	1435	then
	1436	if mkdir -p $catalogname
	1437	then
	1438	printf "\n\n *** directory:"
	1439	printf "\n $catalogname"
	1440	printf "\n was created\n"
	1441	else
	1442	printf "\n\n +++ OUTPUT-file:"
	1443	printf "\n $filename"
	1444	printf "\n cannot be created, because directory does not exist"
	1445	printf "\n and cannot be created either"
	1446	printf "\n"
	1447	locat=output ; exit
	1448	fi 2>/dev/null
	1449	else
	1450	printf "\n\n +++ OUTPUT-file:"
	1451	printf "\n $filename"
	1452	printf "\n cannot be created, although directory exists"
	1453	printf "\n"
	1454	locat=output ; exit
	1455	fi
	1456	fi 2>/dev/null
	1457	else
	1458
	1459	# ZYKLUSNUMMER FESTSTELLEN
	1460	ls -1 -d $filename > filelist 2>/dev/null
	1461	ls -1 -d $filename.* >> filelist 2>/dev/null
	1462	while read zeile
	1463	do
	1464	cycle=$(print $zeile \| cut -f2 -d".")
	1465	if [[ "$cycle" = "$zeile" \|\| "$cycle" = ${extout[$i]} ]]
	1466	then
	1467	(( icycle = 1 ))
	1468	else
	1469	(( icycle = $cycle + 1 ))
	1470	fi
	1471	if (( icycle > maxcycle ))
	1472	then
	1473	(( maxcycle = icycle ))
	1474	fi
	1475	done <filelist
	1476	rm filelist
	1477	fi
	1478
	1479	# EVTL. ZYKLUSNUMMER AN DATEINAMEN ANFUEGEN UND PRUEFEN, OB SICH
	1480	# DATEI AUCH WIRKLICH ANLEGEN LAESST. IM APPEND-FALL MUSS AN DEN
	1481	# HOECHSTEN VORHANDENEN ZYKLUS-ANGEHAENGT WERDEN. ANLAGEPRUEFUNG
	1482	# IST DANN NATUERLICH NICHT ZULAESSIG BZW. MOEGLICH
	1483	if [[ "${actionout[$i]}" != a ]]
	1484	then
	1485	if (( maxcycle > 0 ))
	1486	then
	1487	filename=${filename}.$maxcycle
	1488	if cat /dev/null > $filename
	1489	then
	1490	rm $filename
	1491	else
	1492	printf "\n +++ OUTPUT-file:"
	1493	printf "\n $filename"
	1494	printf "\n cannot be created"
	1495	locat=output ; exit
	1496	fi
	1497	fi
	1498	else
	1499	(( maxcycle = maxcycle - 1 ))
	1500	if (( maxcycle > 0 ))
	1501	then
	1502	filename=${filename}.$maxcycle
	1503	fi
	1504	fi
	1505
	1506	# DATEINAMEN OHNE PFAD ABER MIT ZYKLUSNUMMER ABSPEICHERN,
	1507	# DA SPAETER BEI ABLAGE AUF ARCHIVSYSTEM BZW. FUER
	1508	# DATEI OUTPUT_FILE_CONNECTIONS EVTL. BENOETIGT
	1509	pathout[$i]=$filename
	1510	if (( maxcycle > 0 ))
	1511	then
	1512	frelout[$i]=${fname}${endout[$i]}.$maxcycle
	1513	else
	1514	frelout[$i]=${fname}${endout[$i]}
	1515	fi
	1516
	1517	fi
	1518	done
	1519
	1520
[260]	1521	# DAS DVR-PAKET ERFORDERT EINE ENTSPRECHENDE BIBLIOTHEK
[83]	1522	if [[ $(echo $package_list \| grep -c dvrp_graphics) != 0 ]]
	1523	then
[260]	1524	if [[ "$dvr_inc" = "" ]]
[83]	1525	then
[260]	1526	printf "\n\n +++ no value for \"dvr_inc\" given in configuration file"
[83]	1527	printf "\n This is required for the dvrp_graphics package.\n"
[260]	1528	locat=dvr; exit
[83]	1529	fi
[260]	1530	if [[ "$dvr_lib" = "" ]]
[83]	1531	then
[260]	1532	printf "\n\n +++ no value for \"dvr_lib\" given in configuration file"
[83]	1533	printf "\n This is required for the dvrp_graphics package.\n"
[260]	1534	locat=dvr; exit
[83]	1535	fi
	1536	fi
	1537
	1538
[1]	1539	# PRUEFEN, OB ENTWEDER HAUPTPROGRAMM ODER NUR EIN AUSFUEHRBARES
	1540	# PROGRAMM VEREINBART WURDE (IN DIESEM FALL BRAUCHT IM WEITEREN NICHT
	1541	# UEBERSETZT ZU WERDEN)
	1542	if [[ "$mainprog" = "" && "$executable" = "" ]]
	1543	then
	1544	printf "\n +++ neither main program nor executable defined"
	1545	locat=source; exit
	1546	elif [[ "$mainprog" != "" && "$executable" != "" ]]
	1547	then
	1548	printf "\n +++ main program as well as executable defined"
	1549	locat=source; exit
	1550	elif [[ "$mainprog" = "" && "$executable" != "" ]]
	1551	then
	1552	do_compile=false
	1553	fi
	1554
	1555
[191]	1556	# SOURCE-VERZEICHNIS ZUM AUFSAMMELN DER ZU UEBERSETZENDEN PROGRAMMTEILE
	1557	# ERZEUGEN. HIERHIN WERDEN SPAETER IM FALL VON BATCH-JOBS AUCH DAS MRUN-
	1558	# SCRIPTS SOWIE DIE KONFIGURATIONSDATEI KOPIERT
[193]	1559	if [[ $restart_run != true && "$SOURCES_COMPLETE" = "" ]]
[191]	1560	then
	1561	rm -rf SOURCES_FOR_RUN_$fname
	1562	mkdir SOURCES_FOR_RUN_$fname
	1563	fi
	1564
	1565
[1]	1566	# ALLE ZU UEBERSETZENDEN PROGRAMMTEILE ZUSAMMENSAMMELN
	1567	# BEI BATCH-JOBS IST DIES NICHT NOETIG, WEIL DIE PROGRAMMTEILE BEREITS DURCH
	1568	# DEN MRUN-AUFRUF ERMITTELT SIND, DER DEN BATCH-JOB GENERIERT HAT, UND
	1569	# IM VERZEICHNIS SOURCES_FOR_RUN_... ABGELEGT SIND
	1570	if [[ $do_compile = true && "$SOURCES_COMPLETE" = "" ]]
	1571	then
	1572
[5]	1573	[[ "$source_list" = LM ]] && source_list=LOCALLY_MODIFIED
	1574	[[ "$source_list" = WP ]] && source_list=WRITE_PERMIT
[1]	1575
	1576
	1577	# EVTL. ZU UEBERSETZENDE PROGRAMMTEILE DADURCH BESTIMMEN, DASS GEPRUEFT
	1578	# WIRD, WELCHE DATEIEN WRITE-PERMIT BESITZEN (DATEIEN SOLLTEN DESHALB
	1579	# UNTER RCS-KONTROLLE STEHEN). MIT DER VARIABLEN EXCLUDE KOENNEN
	1580	# BESTIMMTE DATEIEN GRUNDSAETZLICH VON DER UEBERSETZUNG AUSGESCHLOSSEN
	1581	# WERDEN. DIES IST NUR BEI MANUELLEM START VON MRUN DURCH DEN BENUTZER
	1582	# MOEGLICH, DA BEI AUTOMATISCHEN RESTARTS TEST DURCH DIE TATSAECHLICH
	1583	# ZU UBERSETZENDEN DATEIEN ERSETZT IST.
	1584	# ALLE ERMITTELTEN DATEIEN WERDEN IM VERZEICHNIS SOURCES_FOR_RUN_...
	1585	# GESAMMELT
[5]	1586	if [[ "$source_list" = WRITE_PERMIT ]]
[1]	1587	then
	1588
	1589	source_list=""
	1590	cd $source_path
	1591
	1592
	1593	# ALLE MOEGLICHEN QUELLCODEDATEIEN AUFLISTEN
	1594	Names=$(ls -1 *.f90 2>&1)
	1595	[[ $(echo $Names \| grep -c '*.f90') = 0 ]] && Filenames="$Names"
	1596	Names=$(ls -1 *.F90 2>&1)
	1597	[[ $(echo $Names \| grep -c '*.F90') = 0 ]] && Filenames="$Filenames $Names"
	1598	Names=$(ls -1 *.F 2>&1)
	1599	[[ $(echo $Names \| grep -c '*.F') = 0 ]] && Filenames="$Filenames $Names"
	1600	Names=$(ls -1 *.f 2>&1)
	1601	[[ $(echo $Names \| grep -c '*.f') = 0 ]] && Filenames="$Filenames $Names"
	1602	Names=$(ls -1 *.c 2>&1)
	1603	[[ $(echo $Names \| grep -c '*.c') = 0 ]] && Filenames="$Filenames $Names"
	1604
	1605
	1606	# DATEIEN MIT WRITE-PERMIT NACH SOURCES_FOR_RUN_... KOPIEREN
	1607	for dateiname in $Filenames
	1608	do
	1609	if [[ -w $dateiname ]]
	1610	then
	1611	if [[ "$exclude" = "" \|\| $(echo $exclude \| grep -c $dateiname) = 0 ]]
	1612	then
	1613	cp $dateiname $working_directory/SOURCES_FOR_RUN_$fname
	1614	source_list=$source_list"$dateiname "
	1615	fi
	1616	fi
	1617	done
	1618
	1619	cd - > /dev/null
	1620
	1621
[5]	1622	elif [[ "$source_list" = LOCALLY_MODIFIED ]]
	1623	then
	1624
	1625	# MODIFIZIERTE DATEIEN DER SVN-ARBEITSKOPIE BESTIMMEN
	1626	source_list=""
	1627	cd $source_path
	1628
	1629
	1630	# PRUEFEN, OB VERZEICHNIS UEBERHAUPT UNTER SVN-KONTROLLE STEHT
	1631	if [[ ! -d .svn ]]
	1632	then
	1633	printf "\n\n +++ source directory"
	1634	printf "\n \"$source_path\" "
	1635	printf "\n is not under control of \"subversion\"."
[306]	1636	printf "\n Please do not use mrun-option \"-s LOCALLY_MODIFIED\"\n"
[5]	1637	fi
	1638
	1639
	1640	# ALLE MODIFIZIERTEN QUELLCODEDATEIEN AUFLISTEN
	1641	Filenames=""
[69]	1642	svn status > tmp_mrun
	1643	while read line
[5]	1644	do
	1645	firstc=`echo $line \| cut -c1`
	1646	if [[ $firstc = M \|\| $firstc = "?" ]]
	1647	then
	1648	Name=`echo "$line" \| cut -c8-`
	1649	extension=`echo $Name \| cut -d. -f2`
	1650	if [[ "$extension" = f90 \|\| "$extension" = F90 \|\| "$extension" = f \|\| "$extension" = F \|\| "$extension" = c ]]
	1651	then
	1652	Filenames="$Filenames "$Name
	1653	fi
	1654	fi
[69]	1655	done < tmp_mrun
[5]	1656
	1657
	1658	# DATEIEN NACH SOURCES_FOR_RUN_... KOPIEREN
	1659	for dateiname in $Filenames
	1660	do
	1661	cp $dateiname $working_directory/SOURCES_FOR_RUN_$fname
	1662	source_list=$source_list"$dateiname "
	1663	done
	1664
	1665	cd - > /dev/null
	1666
	1667
[1]	1668	# MITTELS OPTION -s ANGEGEBENE DATEIEN NACH SOURCES_FOR_RUN_... KOPIEREN
	1669	# BEI AUTOMATISCHEN FORTSETZUNGSLAEUFEN SIND DORT SCHON ALLE DATEIEN
	1670	# VORHANDEN
[5]	1671	elif [[ "$source_list" != "" && $restart_run != true ]]
[1]	1672	then
	1673
	1674	cd $source_path
	1675
	1676	for filename in $source_list
	1677	do
	1678
	1679	# QUELLTEXT-DATEI DARF KEINE PFADE BEINHALTEN
	1680	if [[ $(print $filename \| grep -c "/") != 0 ]]
	1681	then
	1682	printf "\n +++ source code file: $filename"
	1683	printf "\n must not contain (\"/\") "
	1684	locat=source; exit
	1685	fi
	1686
	1687	if [[ ! -f $filename ]]
	1688	then
	1689	printf "\n +++ source code file: $filename"
	1690	printf "\n does not exist"
	1691	locat=source; exit
	1692	else
	1693	cp $filename $working_directory/SOURCES_FOR_RUN_$fname
	1694	fi
	1695
	1696	done
	1697
	1698	cd - > /dev/null
	1699
	1700	fi
	1701
	1702
	1703	# PRUEFEN, OB ENTWEDER HAUPTPROGRAMM VORHANDEN UND ES EVTL. IN DER
	1704	# LISTE DER ZU UEBERSETZENDEN PROGRAMMTEILE MIT ENTHALTEN IST (WENN
	1705	# NICHT, WIRD ES DIESER LISTE HINZUGEFUEGT)
[5]	1706	if [[ $restart_run != true ]]
[1]	1707	then
	1708
	1709	if [[ ! -f "$source_path/$mainprog" ]]
	1710	then
	1711	printf "\n\n +++ main program: $mainprog"
	1712	printf "\n does not exist in source directory"
	1713	printf "\n \"$source_path\"\n"
	1714	locat=source; exit
	1715	else
	1716	if [[ $(echo $source_list \| grep -c $mainprog) = 0 ]]
	1717	then
	1718	cp $source_path/$mainprog SOURCES_FOR_RUN_$fname
	1719	source_list=${mainprog}" $source_list"
	1720	fi
	1721	fi
	1722	fi
	1723
	1724
[211]	1725	# MAKEFILE AUF VORHANDENSEIN PRUEFEN UND KOPIEREN
	1726	# BEI RESTART-LAEUFEN LIEGT ES SCHON IM VERZEICHNIS SOURCES_FOR_RUN...
	1727	if [[ "$restart_run" != true ]]
	1728	then
	1729	[[ "$makefile" = "" ]] && makefile=$source_path/Makefile
	1730	if [[ ! -f $makefile ]]
	1731	then
	1732	printf "\n +++ file \"$makefile\" does not exist"
	1733	locat=make; exit
	1734	else
	1735	cp $makefile SOURCES_FOR_RUN_$fname/Makefile
	1736	fi
	1737	fi
	1738
	1739
[1]	1740	# DATEIEN AUS ZUSAETZLICHEM QUELLVERZEICHNIS HINZUFUEGEN
[5]	1741	if [[ $restart_run != true && "$add_source_path" != "" ]]
[1]	1742	then
	1743
	1744	# GIBT ES DAS VERZEICHNIS UEBERHAUPT?
	1745	if [[ ! -d $add_source_path ]]
	1746	then
	1747	printf "\n\n +++ WARNING: additional source code directory"
	1748	printf "\n \"$add_source_path\" "
	1749	printf "\n does not exist or is not a directory."
	1750	printf "\n No source code will be used from this directory!\n"
	1751	add_source_path=""
	1752	sleep 3
	1753	else
	1754
	1755	cd $add_source_path
[211]	1756	found=false
[1]	1757
	1758	Names=$(ls -1 *.f90 2>&1)
	1759	[[ $(echo $Names \| grep -c '*.f90') = 0 ]] && AddFilenames="$Names"
	1760	Names=$(ls -1 *.F90 2>&1)
	1761	[[ $(echo $Names \| grep -c '*.F90') = 0 ]] && AddFilenames="$AddFilenames $Names"
	1762	Names=$(ls -1 *.F 2>&1)
	1763	[[ $(echo $Names \| grep -c '*.F') = 0 ]] && AddFilenames="$AddFilenames $Names"
	1764	Names=$(ls -1 *.f 2>&1)
	1765	[[ $(echo $Names \| grep -c '*.f') = 0 ]] && AddFilenames="$AddFilenames $Names"
	1766	Names=$(ls -1 *.c 2>&1)
	1767	[[ $(echo $Names \| grep -c '*.c') = 0 ]] && AddFilenames="$AddFilenames $Names"
	1768
	1769	cd - > /dev/null
	1770	cd SOURCES_FOR_RUN_$fname
	1771
[211]	1772	# COPY MAKEFILE IF EXISTING
	1773	if [[ -f $add_source_path/Makefile ]]
	1774	then
	1775	printf "\n\n *** user Makefile from directory"
	1776	printf "\n \"$add_source_path\" is used \n"
	1777	sleep 1
	1778	cp $add_source_path/Makefile .
	1779	fi
	1780
[1]	1781	for dateiname in $AddFilenames
	1782	do
	1783	if [[ -f $dateiname ]]
	1784	then
	1785	printf "\n +++ source code file \"$dateiname\" found in additional"
	1786	printf "\n source code directory \"$add_source_path\" "
[211]	1787	printf "\n but was also given with option \"-s\" which means that it should be taken"
	1788	printf "\n from directory \"$source_path\"."
[1]	1789	locat=source; exit
	1790	fi
	1791
	1792	cp $add_source_path/$dateiname .
	1793	source_list="$source_list $dateiname"
	1794
[211]	1795	# CHECK IF FILE IS CONTAINED IN MAKEFILE
	1796	if [[ $(grep -c $dateiname Makefile) = 0 ]]
	1797	then
	1798	printf "\n\n +++ user file \"$dateiname\" "
	1799	printf "\n is not listed in Makefile \n"
	1800	locat=source; exit
	1801	else
	1802
[1]	1803	# Default User-Interface von der Liste entfernen, falls Datei
	1804	# ein User-Interface enthaelt
[211]	1805	# if [[ $( cat $dateiname \| grep -c "END SUBROUTINE user_parin" ) != 0 ]]
	1806	# then
	1807	# if [[ $dateiname != user_interface.f90 && -f user_interface.f90 ]]
	1808	# then
	1809	# rm -rf user_interface.f90
	1810	# source_list=`echo $source_list \| sed -e 's/user_interface.f90//'`
	1811	# printf "\n\n *** default \"user_interface.f90\" removed from the files to be translated"
	1812	# printf "\n since a user-interface is found in file"
	1813	# printf "\n \"$add_source_path/$dateiname\" \n"
	1814	# sleep 3
	1815	# else
	1816	if [[ $found = false ]]
[1]	1817	then
[211]	1818	found=true
	1819	printf "\n\n *** following user file(s) added to the"
	1820	printf " files to be translated:\n "
[1]	1821	fi
[211]	1822	printf "$dateiname "
	1823	sleep 0.5
[1]	1824	fi
	1825	done
[211]	1826	[[ $found = true ]] && printf "\n"
[1]	1827	cd - > /dev/null
	1828	fi
	1829	fi
	1830
	1831
	1832	# ALLE UNTERPROGRAMME, DIE ZU VEREINBARTEN SOFTWAREPAKETEN GEHOEREN,
	1833	# DER LISTE DER ZU UEBERSETZENDEN DATEIEN HINZUFUEGEN
[5]	1834	if [[ $restart_run != true && -n $package_list ]]
[1]	1835	then
	1836
	1837	cd $source_path
	1838
	1839	for package in $package_list
	1840	do
	1841
	1842	[[ $package = "dvrp_graphics+1PE" ]] && package=dvrp_graphics
	1843
	1844	# ERMITTELE ALLE DATEIEN, DIE ZUM PAKET GEHOEREN
	1845	# FEHLERMELDUNGEN WERDEN ABGEFANGEN, DA * AUCH VERZEICHNISSNAMEN
	1846	# LIEFERT
	1847	package_source_list=`grep "defined( __$package " * 2>/dev/null \| cut -f1 -d:`
	1848
	1849
	1850	# FUEGE DIESE DATEIEN DER LISTE DER ZU UEBERSETZENDEN DATEIEN
	1851	# HINZU, FALLS SIE NOCH NICHT DAZUGEHOEREN
	1852	for source_list_name in $package_source_list
	1853	do
	1854	if [[ $(echo $source_list \| grep -c $source_list_name) = 0 ]]
	1855	then
	1856
	1857	# NUR DATEIEN MIT GUELTIGEN ENDUNGEN VERWENDEN
	1858	ending=`echo $source_list_name \| cut -f2 -d.`
	1859	if [[ "$ending" = f90 \|\| "$ending" = F90 \|\| "$ending" = f \|\| "$ending" = F \|\| "$ending" = c ]]
	1860	then
	1861	cp $source_list_name $working_directory/SOURCES_FOR_RUN_$fname
	1862	source_list="$source_list $source_list_name"
	1863	fi
	1864	fi
	1865	done
	1866	done
	1867
	1868	cd - > /dev/null
	1869	fi
	1870
	1871
	1872	# MAKEFILE AUF VORHANDENSEIN PRUEFEN UND KOPIEREN
	1873	# BEI RESTART-LAEUFEN LIEGT ES SCHON IM VERZEICHNIS SOURCES_FOR_RUN...
[211]	1874	# if [[ "$restart_run" != true ]]
	1875	# then
	1876	# [[ "$makefile" = "" ]] && makefile=$source_path/Makefile
	1877	# if [[ ! -f $makefile ]]
	1878	# then
	1879	# printf "\n +++ file \"$makefile\" does not exist"
	1880	# locat=make; exit
	1881	# else
	1882	# cp $makefile SOURCES_FOR_RUN_$fname/Makefile
	1883	# fi
	1884	# fi
[1]	1885
	1886	fi # do_compile=true
	1887
	1888
	1889	# FALLS PROGRAMMTEILE UEBERSETZT WERDEN SOLLEN, FOLGEN JETZT EINIGE
	1890	# UEBERPRUEFUNGEN UND DAS SETZEN DER PRAEPROZESSOR-DIREKTIVEN
	1891	if [[ $do_compile = true ]]
	1892	then
	1893
	1894	# PRAEPROZESSOR-DIREKTIVEN ZUM SELEKTIVEN AUSWAEHLEN VON CODETEILEN
	1895	# ZUSAMMENSETZEN
[83]	1896	# DIREKTIVEN ZUM AKTIVIEREN VON RECHNERSPEZIFISCHEM CODE
[1]	1897	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
	1898	then
[82]	1899	cpp_options="${cpp_options},-D__ibm=__ibm"
[1]	1900	elif [[ $(echo $localhost \| cut -c1-3) = nec ]]
	1901	then
[82]	1902	cpp_options="$cpp_options -D__nec"
	1903	elif [[ $(echo $localhost \| cut -c1-2) = lc ]]
	1904	then
	1905	cpp_options="$cpp_options -D__lc"
[1]	1906	else
[82]	1907	cpp_options="$cpp_options -D__$localhost"
[1]	1908	fi
[83]	1909
	1910	# DIREKTIVEN DIE DURCH OPTION -K BESTIMMT WERDEN (Z.B. PARALLEL)
[1]	1911	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
	1912	then
[82]	1913	[[ -n $cond1 ]] && cpp_options="${cpp_options},-D__$cond1=__$cond1"
	1914	[[ -n $cond2 ]] && cpp_options="${cpp_options},-D__$cond2=__$cond2"
[1]	1915	else
[82]	1916	[[ -n $cond1 ]] && cpp_options="$cpp_options -D__$cond1"
	1917	[[ -n $cond2 ]] && cpp_options="$cpp_options -D__$cond2"
[1]	1918	fi
[83]	1919
	1920	# DIREKTIVEN DIE SOFTWAREPAKETE AKTIVIEREN (OPTION -p)
[1]	1921	if [[ -n $package_list ]]
	1922	then
	1923	for package in $package_list
	1924	do
	1925	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
	1926	then
	1927	if [[ $package != "dvrp_graphics+1PE" ]]
	1928	then
[82]	1929	cpp_options="${cpp_options},-D__$package=__$package"
[1]	1930	else
[82]	1931	cpp_options="${cpp_options},-D__dvrp_graphics=__dvrp_graphics"
[1]	1932	export use_seperate_pe_for_dvrp_output=true
	1933	fi
	1934	else
	1935	if [[ $package != "dvrp_graphics+1PE" ]]
	1936	then
[82]	1937	cpp_options="$cpp_options -D__$package"
[1]	1938	else
[82]	1939	cpp_options="$cpp_options -D__dvrp_graphics"
[1]	1940	export use_seperate_pe_for_dvrp_output=true
	1941	fi
	1942	fi
	1943	done
	1944	fi
[83]	1945
	1946	# DIREKTIVEN DIE DURCH OPTION -D FESTGELEGT SIND
[1]	1947	if [[ -n $cpp_opts ]]
	1948	then
	1949	for popts in $cpp_opts
	1950	do
[82]	1951	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
	1952	then
	1953	cpp_options="${cpp_options},-D__$popts=__$popts"
	1954	else
	1955	cpp_options="$cpp_options -D__$popts"
	1956	fi
[1]	1957	done
	1958	fi
	1959
	1960	else
	1961
	1962
	1963	# BEI LOKALEN RECHNUNGEN PRUEFEN, OB EXECUTABLE VORHANDEN
	1964	if [[ $do_remote = false ]]
	1965	then
	1966	if [[ ! -f $executable ]]
	1967	then
	1968	printf "\n +++ executable file: $executable"
	1969	printf "\n does not exist"
	1970	locat=executable; exit
	1971	fi
	1972	fi
	1973	fi
	1974
	1975
	1976	# JOBMODUS FESTSTELLEN
	1977	if [[ "$ENVIRONMENT" = BATCH && $localhost != lctit \|\| "$QUEUE" != interactive && $localhost = lctit ]]
	1978	then
	1979	jobmo=BATCH
	1980	else
	1981	jobmo=INTERACTIVE
	1982	fi
	1983
	1984
	1985	# HOSTSPEZIFISCHE DEFAULT-COMPILER SETZEN, FALLS NICHT BEREITS
	1986	# DURCH BENUTZER ANDERWEITIG VEREINBART
	1987	if [[ "$compiler_name" = "" ]]
	1988	then
[82]	1989
[220]	1990	printf "\n +++ no compiler specified for \"$host $cond1 $cond2\""
[82]	1991	locat=compiler_name; exit
	1992
[1]	1993	fi
	1994
	1995
[251]	1996	# COMPILER AUF RIAMS NEC UEBERSCHREIBEN
	1997	[[ $localhost = necriam ]] && compiler_name=mpif90
[1]	1998
	1999
	2000
	2001	# TEMPORAEREN KATALOGNAMEN BESTIMMEN
	2002	kennung=$RANDOM
	2003	if [[ "$tmp_user_catalog" = "" ]]
	2004	then
[312]	2005	if [[ $localhost = ibmh ]]
[1]	2006	then
[312]	2007	tmp_user_catalog=$SCRATCH
[1]	2008	elif [[ $localhost = nech ]]
	2009	then
	2010	tmp_user_catalog=$WRKSHR
	2011	else
	2012	tmp_user_catalog=/tmp
	2013	fi
	2014	fi
	2015	TEMPDIR=$tmp_user_catalog/${usern}.$kennung
	2016
	2017
	2018	# KATALOGNAMEN FUER ZWISCHENSPEICHERUNG VON FORTSETZUNGSLAUFDATEIEN
	2019	# BESTIMMEN
	2020	if [[ "$tmp_data_catalog" = "" ]]
	2021	then
[312]	2022	if [[ $localhost = ibmb ]]
[1]	2023	then
	2024	tmp_data_catalog=$WORK/mrun_restart_data
	2025	elif [[ $localhost = nech ]]
	2026	then
	2027	tmp_data_catalog=$WRKSHR/mrun_restart_data
	2028	else
	2029	tmp_data_catalog=/tmp/mrun_restart_data
	2030	fi
	2031	fi
	2032
	2033
	2034	# EVENTUELL BEI LOKALEN RECHNUNGEN $-ZEICHEN IN ENVIRONMENT-VARIABLEN
	2035	# ERSETZEN
	2036	if [[ $do_remote = false && $do_compile = true ]]
	2037	then
	2038	eval fopts=\"$fopts\"
	2039	eval lopts=\"$lopts\"
	2040	fi
	2041
	2042
	2043
	2044	# COMPILE- UND LINK-OPTIONEN BESTIMMEN
[260]	2045	fopts="$fopts $netcdf_inc $dvr_inc"
	2046	lopts="$lopts $netcdf_lib $dvr_lib"
[1]	2047	ROPTS="$ropts"
[440]	2048	if [[ ( $(echo $host \| cut -c1-3) = nec \|\| $(echo $host \| cut -c1-3) = ibm \|\| $host = lckyoto \|\| $host = lcsgih \|\| $host = lcsgib \|\| $host = lctit \|\| $host = lcfimm \|\| $host = lcxt4 \|\| $host = lcxt5m \|\| $host = lck ) && -n $numprocs ]]
[1]	2049	then
	2050	XOPT="-X $numprocs"
	2051	fi
	2052
	2053
	2054
	2055	# PRUEFEN DER CPU-ZEIT. (CPUMAX WIRD ALS ENV-VARIABLE VOM HAUTPRO-
	2056	# GRAMM BENOETIGT
	2057	done=false
	2058	while [[ $done = false ]]
	2059	do
	2060	cputime=$cpumax
	2061	if (( $cputime == 0 ))
	2062	then
[246]	2063	if [[ $do_batch = true ]]
	2064	then
	2065	printf "\n +++ cpu-time is undefined"
	2066	printf "\n >>> Please type CPU-time in seconds as INTEGER:"
	2067	printf "\n >>> "
	2068	read cputime 1>/dev/null 2>&1
	2069	else
	2070	cputime=10000000 # NO CPU LIMIT FOR INTERACTIVE RUNS
	2071	fi
[1]	2072	else
	2073	done=true
	2074	fi
	2075	cpumax=$cputime
	2076	done
	2077
	2078	(( minuten = cputime / 60 ))
	2079	(( sekunden = cputime - minuten * 60 ))
	2080
	2081
	2082	# PRUEFEN DER KERNSPEICHERANFORDERUNG
	2083	if [[ $do_batch = true ]]
	2084	then
	2085	done=false
	2086	while [[ $done = false ]]
	2087	do
	2088	if (( memory == 0 ))
	2089	then
	2090	printf "\n +++ memory demand is undefined"
	2091	printf "\n >>> Please type memory in MByte per process as INTEGER:"
	2092	printf "\n >>> "
	2093	read memory 1>/dev/null 2>&1
	2094	else
	2095	done=true
	2096	fi
	2097	done
	2098	fi
	2099
	2100
	2101	# PRUEFEN, OB FUER REMOTE-RECHNUNGEN EIN BENUTZERNAME ANGEGEBEN WURDE
	2102	if [[ $do_remote = true && -z $remote_username ]]
	2103	then
	2104	while [[ -z $remote_username ]]
	2105	do
	2106	printf "\n +++ username on remote host \"$host\" is undefined"
	2107	printf "\n >>> Please type username:"
	2108	printf "\n >>> "
	2109	read remote_username
	2110	done
	2111	mc="$mc -u$remote_username"
	2112	fi
	2113
[221]	2114
[493]	2115	# set module load command and export for subjob
	2116	if [[ "$modules" != "" ]]
	2117	then
	2118	export module_calls="module load ${modules};"
	2119	fi
	2120
[555]	2121	# bugfix for wrong netcdf module
[562]	2122	if [[ $host = lcsgib \|\| $host = lcsgih ]]
[555]	2123	then
	2124	if [[ $(echo $module_calls \| grep -c netcdf/3.6.3-intel) != 0 ]]
	2125	then
[562]	2126	export module_calls="$module_calls export LD_LIBRARY_PATH=/sw/dataformats/netcdf/3.6.3-intel/lib:\$LD_LIBRARY_PATH;"
[555]	2127	fi
	2128	fi
[493]	2129
[555]	2130
[221]	2131	# SET DEFAULT VALUE FOR MPI MODULE TO BE USED ON SGI-ALTIX
	2132	if [[ $host = lcsgib \|\| $host = lcsgih ]]
	2133	then
[493]	2134	if [[ $(echo $modules \| grep -c mpt ) != 0 ]]
	2135	then
	2136	mpilib=mpt
	2137	elif [[ $(echo $modules \| grep -c mvapich ) != 0 ]]
	2138	then
	2139	mpilib=mvapich
	2140	fi
[221]	2141	fi
	2142
	2143
	2144
[1]	2145	###########################################################################
	2146	# HEADER-AUSGABE
	2147	###########################################################################
	2148
	2149
	2150	calltime=$(date)
	2151	printf "\n"
	2152	# [[ $silent = false ]] && clear
	2153	printf "#--------------------------------------------------------------# \n"
	2154	printf "\| $version$calltime \| \n"
	2155	printf "\| \| \n"
	2156	spalte1="called on:"; spalte2=$localhost_realname
	2157	printf "\| $spalte1$spalte2 \| \n"
	2158	if [[ $local_compile = false ]]
	2159	then
	2160	if [[ $do_remote = true ]]
	2161	then
	2162	spalte1="execution on:"; spalte2="$host (username: $remote_username)"
	2163	else
	2164	spalte1="execution on:"; spalte2="$host ($localhost_realname)"
	2165	fi
	2166	else
	2167	spalte1="compiling test only!"; spalte2=""
	2168	fi
	2169	printf "\| $spalte1$spalte2 \| \n"
	2170	if [[ -n $numprocs ]]
	2171	then
	2172	spalte1="number of PEs:"; spalte2=$numprocs
	2173	printf "\| $spalte1$spalte2 \| \n"
	2174	fi
	2175	if [[ -n $tasks_per_node ]]
	2176	then
	2177	spalte1="tasks per node:"; spalte2="$tasks_per_node (number of nodes: $nodes)"
	2178	printf "\| $spalte1$spalte2 \| \n"
	2179	fi
	2180	if [[ $threads_per_task != 1 ]]
	2181	then
	2182	spalte1="threads per task:"; spalte2="$threads_per_task"
	2183	printf "\| $spalte1$spalte2 \| \n"
	2184	fi
	2185	printf "\| \| \n"
	2186	if [[ $do_compile = true ]]
	2187	then
[475]	2188	if [[ "$mopts" != "" ]]
	2189	then
[493]	2190	spalte1="make options:"; spalte2=$mopts
[475]	2191	printf "\| $spalte1$spalte2 \| \n"
	2192	zeile=$(echo "$mopts" \| cut -c41-)
	2193	while [[ "$zeile" != "" ]]
	2194	do
	2195	spalte1=""
	2196	spalte2=$zeile
	2197	printf "\| $spalte1$spalte2 \| \n"
	2198	zeile=$(echo "$zeile" \| cut -c41-)
	2199	done
	2200	fi
	2201
[493]	2202	spalte1="cpp directives:"; spalte2=$cpp_options
[1]	2203	printf "\| $spalte1$spalte2 \| \n"
[82]	2204	zeile=$(echo "$cpp_options" \| cut -c41-)
[1]	2205	while [[ "$zeile" != "" ]]
	2206	do
	2207	spalte1=""
	2208	spalte2=$zeile
	2209	printf "\| $spalte1$spalte2 \| \n"
	2210	zeile=$(echo "$zeile" \| cut -c41-)
	2211	done
	2212
[493]	2213	spalte1="compiler options:"; spalte2="$fopts"
[1]	2214	printf "\| $spalte1$spalte2 \| \n"
[82]	2215	zeile=$(echo "$fopts" \| cut -c41-)
[1]	2216	while [[ "$zeile" != "" ]]
	2217	do
	2218	spalte1=""
	2219	spalte2=$zeile
	2220	printf "\| $spalte1$spalte2 \| \n"
	2221	zeile=$(echo "$zeile" \| cut -c41-)
	2222	done
	2223
[493]	2224	spalte1="linker options:"; spalte2=$lopts
[1]	2225	printf "\| $spalte1$spalte2 \| \n"
[82]	2226	zeile=$(echo "$lopts" \| cut -c41-)
[1]	2227	while [[ "$zeile" != "" ]]
	2228	do
	2229	spalte1=""
	2230	spalte2=$zeile
	2231	printf "\| $spalte1$spalte2 \| \n"
	2232	zeile=$(echo "$zeile" \| cut -c41-)
	2233	done
	2234
[493]	2235	spalte1="modules to be load:"; spalte2=$modules
	2236	printf "\| $spalte1$spalte2 \| \n"
	2237	zeile=$(echo "$modules" \| cut -c41-)
	2238	while [[ "$zeile" != "" ]]
	2239	do
	2240	spalte1=""
	2241	spalte2=$zeile
	2242	printf "\| $spalte1$spalte2 \| \n"
	2243	zeile=$(echo "$zeile" \| cut -c41-)
	2244	done
	2245
[1]	2246	spalte1="main program":; spalte2=$mainprog
	2247	printf "\| $spalte1$spalte2 \| \n"
	2248	else
	2249	spalte1=executable:; spalte2=$executable
	2250	printf "\| $spalte1$spalte2 \| \n"
	2251	fi
	2252	printf "\| \| \n"
	2253	spalte1="base name of files":; spalte2=$fname
	2254	printf "\| $spalte1$spalte2 \| \n"
	2255	if [[ $fname != $afname ]]
	2256	then
	2257	spalte1="base name of input files":; spalte2=$afname
	2258	printf "\| $spalte1$spalte2 \| \n"
	2259	fi
	2260	spalte1="INPUT control list":; spalte2=$input_list
	2261	printf "\| $spalte1$spalte2 \| \n"
	2262	spalte1="OUTPUT control list":; spalte2=$output_list
	2263	printf "\| $spalte1$spalte2 \| \n"
	2264
	2265	if [[ $do_batch = true \|\| "$LOADLBATCH" = yes ]]
	2266	then
	2267	spalte1="memory demand / PE":; spalte2="$memory MB"
	2268	printf "\| $spalte1$spalte2 \| \n"
	2269	spalte1=CPU-time:; spalte2="$minuten:$sekunden"
	2270	printf "\| $spalte1$spalte2 \| \n"
	2271	fi
	2272
	2273	if [[ $do_compile = true ]]
	2274	then
	2275	printf "\| \| \n"
	2276	printf "\| Files to be compiled: \| \n"
	2277	zeile=$source_list
	2278	while [[ "$zeile" != "" ]]
	2279	do
	2280	spalte3=$zeile
	2281	printf "\| $spalte3 \| \n"
	2282	zeile=$(echo "$zeile" \| cut -c61-)
	2283	done
	2284	fi
	2285	printf "#--------------------------------------------------------------#"
	2286
	2287
	2288
	2289	# BEDINGTE AUSGABE DER DATEIVERBINDUNGEN
	2290	if [[ $do_trace = true ]]
	2291	then
	2292	(( i = 0 ))
	2293	while (( i < iin ))
	2294	do
	2295	(( i = i + 1 ))
	2296	if (( i == 1 ))
	2297	then
	2298	printf "\n\n >>> INPUT-file assignments:\n"
	2299	fi
	2300	printf "\n ${localin[$i]} : ${absnamein[$i]}"
	2301	done
	2302	(( i = 0 ))
	2303	while (( i < iout ))
	2304	do
	2305	(( i = i + 1 ))
	2306	if (( i == 1 ))
	2307	then
	2308	printf "\n\n >>> OUTPUT-file assignments:\n"
	2309	fi
	2310	printf "\n ${localout[$i]} : ${pathout[$i]}"
	2311	done
	2312	(( i = 0 ))
	2313	while (( i < iic ))
	2314	do
	2315	(( i = i + 1 ))
	2316	if (( i == 1 ))
	2317	then
	2318	printf "\n\n >>> INPUT-commands:\n"
	2319	fi
	2320	printf "\n ${in_command[$i]}"
	2321	done
	2322	(( i = 0 ))
	2323	while (( i < ioc ))
	2324	do
	2325	(( i = i + 1 ))
	2326	if (( i == 1 ))
	2327	then
	2328	printf "\n\n >>> OUTPUT-commands:\n"
	2329	fi
	2330	printf "\n ${out_command[$i]}"
	2331	done
	2332	fi
	2333
	2334
	2335	# ABFRAGEN BEI AUFRUF AUF LOKALER MASCHINE
	2336	if [[ $remotecall = false && $silent = false && $jobmo != BATCH ]]
	2337	then
	2338	antwort=dummy
	2339	printf "\n\n"
	2340	while [[ "$antwort" != y && "$antwort" != Y && "$antwort" != n && "$antwort" != N ]]
	2341	do
	2342	printf " >>> everything o.k. (y/n) ? "
	2343	read antwort
	2344	done
	2345	if [[ $antwort = n \|\| $antwort = N ]]
	2346	then
	2347	locat=user_abort; (( iec = 0 )); exit
	2348	fi
	2349	if [[ $do_batch = true ]]
	2350	then
	2351	printf " >>> batch-job will be created and submitted"
	2352	else
	2353	if [[ $local_compile = false ]]
	2354	then
	2355	printf " >>> MRUN will now continue to execute on this machine"
	2356	else
	2357	printf " >>> a test compilation will now be carried out on this machine"
	2358	fi
	2359	fi
	2360	fi
	2361
	2362
	2363
	2364
	2365	# FALLS AUF DIESER MASCHINE GERECHNET WERDEN SOLL, WERDEN JETZT ENTSPRE-
	2366	# CHENDE AKTIONEN DURCHGEFUEHRT
	2367	if [[ $do_batch = false ]]
	2368	then
	2369
	2370
	2371	# TEMPORAEREN KATALOG ERZEUGEN
	2372	mkdir -p $TEMPDIR
	2373	chmod go+rx $TEMPDIR
	2374	tmpcreate=true
	2375
[493]	2376	# set striping on lustre file system
	2377	# if [[ $localhost = lcsgih ]]
	2378	# then
	2379	# lfs setstripe -s 8192k -c 16 $TEMPDIR
	2380	# lfs getstripe $TEMPDIR
	2381	# fi
[1]	2382
[493]	2383
[1]	2384	# SAEMTLICHE QUELLTEXT-DATEIEN BZW. AUSFUEHRBARES PROGRAMM IN
	2385	# TEMPORAERES VERZEICHNIS KOPIEREN
	2386	if [[ $do_compile = true ]]
	2387	then
	2388
	2389	# ON NEC, COMPILATION IS DONE ON HOST CROSS VIA CROSS COMPILING
	2390	# CREATE A TEMPORARY DIRECTORY ON THAT MACHINE (HOME MOUNTED VIA NFS)
	2391	if [[ $localhost = nech ]]
	2392	then
	2393	TEMPDIR_COMPILE=$HOME/work/${usern}.$kennung
	2394	if mkdir -p $TEMPDIR_COMPILE
	2395	then
	2396	printf "\n *** \"$TEMPDIR_COMPILE\" "
	2397	printf "\n is generated as temporary directory for cross compiling\n"
	2398	else
	2399	printf "\n +++ creating directory \"$TEMPDIR_COMPILE\" "
	2400	printf "\n needed for cross compilation failed"
	2401	locat=compile
	2402	exit
	2403	fi
	2404	else
	2405	TEMPDIR_COMPILE=$TEMPDIR
	2406	fi
	2407
	2408
[82]	2409	# PFADNAMEN FUER DAS MAKE-DEPOSITORY ERMITTELN
	2410	line=""
	2411	grep "%depository_path" $config_file > tmp_mrun
	2412	while read line
	2413	do
	2414	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
	2415	then
	2416	if [[ "$(echo $line \| cut -d" " -s -f3)" = "" ]]
[1]	2417	then
[82]	2418	global_depository_path=`echo $line \| cut -d" " -s -f2`
[1]	2419	fi
[82]	2420	fi
	2421	done < tmp_mrun
[1]	2422
[82]	2423	line=""
	2424	grep " $localhost" $config_file \| grep "%depository_path" > tmp_mrun
	2425	while read line
	2426	do
	2427	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
[1]	2428	then
[211]	2429	if [[ "$(echo $line \| cut -d" " -s -f4)" = "$cond1" && "$(echo $line \| cut -d" " -s -f5)" = "$cond2" ]]
	2430	then
	2431	local_depository_path=`echo $line \| cut -d" " -s -f2`
	2432	fi
[1]	2433	fi
[82]	2434	done < tmp_mrun
[1]	2435
[82]	2436	if [[ "$local_depository_path" = "" ]]
	2437	then
	2438	if [[ "$global_depository_path" != "" ]]
[1]	2439	then
[82]	2440	local_depository_path=$global_depository_path
[1]	2441	else
[82]	2442	printf "\n\n +++ no depository path found in configuration file"
	2443	printf "\n for local host \"$localhost\" "
	2444	printf "\n please set \"\%depository_path\" in configuration file\n"
	2445	locat=config_file; exit
[1]	2446	fi
[82]	2447	fi
	2448	eval local_depository_path=$local_depository_path
[215]	2449	[[ "$cond1" != "" ]] && local_depository_path=${local_depository_path}_$cond1
	2450	[[ "$cond2" != "" ]] && local_depository_path=${local_depository_path}_$cond2
[1]	2451
[215]	2452
[82]	2453	basename=`print $mainprog \| cut -f1 -d"."`
	2454	eval make_depository=${local_depository_path}/${basename}_current_version.tar
	2455	if [[ ! -f $make_depository ]]
	2456	then
	2457	printf "\n"
	2458	printf "\n *** WARNING: make depository \"$make_depository\" not found"
	2459	printf "\n \"make\" will fail, if the Makefile or other source files are missing\n"
	2460	else
	2461	cp $make_depository $TEMPDIR_COMPILE
[1]	2462	cd $TEMPDIR_COMPILE
[82]	2463	tar -xf $make_depository > /dev/null 2>&1
[1]	2464	cd - > /dev/null
	2465	fi
[82]	2466
	2467	cp SOURCES_FOR_RUN_$fname/* $TEMPDIR_COMPILE
	2468
[1]	2469	else
[475]	2470
[1]	2471	cp $executable ${TEMPDIR}/a.out
[475]	2472
[1]	2473	fi
	2474
	2475
	2476	# WECHSEL IN TEMPORAEREN KATALOG
[475]	2477	cd $TEMPDIR
[1]	2478	printf "\n *** changed to temporary directory: $TEMPDIR"
	2479
	2480
	2481	# OUTPUT-DATEI-VERBINDUNGEN AUF TEMPORAERER DATEI ABLEGEN
	2482	# DIESE DATEI KANN VON SPAETER AUFZURUFENDEN BENUTZERPROZEDUREN GELESEN
	2483	# WERDEN, UM ZU LOKALEN DATEINAMEN GEHOERENDE PERMANENTE NAMEN ZU
	2484	# ERMITTELN
	2485	(( i = 0 ))
	2486	while (( i < iout ))
	2487	do
	2488	(( i = i + 1 ))
	2489	if [[ "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = tra \|\| "${actionout[$i]}" = trpe ]]
	2490	then
	2491	printf "${localout[$i]} ${actionout[$i]}\n${pathout[$i]}\n${localhost}_${fname}${endout[$i]}\n" >> OUTPUT_FILE_CONNECTIONS
	2492	else
	2493	printf "${localout[$i]} ${actionout[$i]}\n${pathout[$i]}\n${frelout[$i]}\n" >> OUTPUT_FILE_CONNECTIONS
	2494	fi
	2495	done
	2496
	2497
	2498	# EVTL. UEBERSETZUNGSAKTIONEN STARTEN
	2499	if [[ $do_compile = true ]]
	2500	then
	2501
	2502
	2503	# COMPILING WITH MAKE (ON NEC COMPILER IS CALLED ON HOST CROSS)
[82]	2504	printf "\n\n\n *** compilation starts \n$striche\n"
	2505	printf " *** compilation with make using following options:\n"
[211]	2506	printf " make depository: $make_depository"
[475]	2507	if [[ "$mopts" != "" ]]
	2508	then
	2509	printf " make options: $mopts\n"
	2510	fi
[82]	2511	printf " compilername: $compiler_name\n"
[475]	2512	printf " compiler options: $fopts\n"
[493]	2513	printf " preprocessor directives: $cpp_options \n"
	2514	printf " linker options: $lopts \n"
	2515	if [[ "$modules" != "" ]]
	2516	then
	2517	printf " modules to be load: $modules \n"
	2518	fi
[82]	2519	printf " source code files: $source_list \n"
	2520
	2521	if [[ $localhost = nech ]]
[1]	2522	then
[493]	2523	ssh 136.172.44.192 -l $usern ". /SX/opt/etc/initsx.sh; $module_calls cd \$HOME/work/${usern}.$kennung; sxmake $mopts -f Makefile PROG=a.out F90=$compiler_name COPT=\"$cpp_options\" F90FLAGS=\"$fopts\" LDFLAGS=\"$lopts\" "
[82]	2524	cp $TEMPDIR_COMPILE/a.out .
	2525	[[ $? != 0 ]] && compile_error=true
	2526	rm -rf $TEMPDIR_COMPILE
[312]	2527	elif [[ $localhost = ibmh ]]
	2528	then
[325]	2529	printf " compiler is called via ssh on \"plogin1\" \n"
[493]	2530	ssh plogin1 -l $usern "export PATH=/sw/ibm/xlf/12.1.0.3/usr/bin:$PATH; $module_calls cd $TEMPDIR; make $mopts -f Makefile PROG=a.out F90=$compiler_name COPT=\"$cpp_options\" F90FLAGS=\"$fopts\" LDFLAGS=\"$lopts\" "
[312]	2531	[[ ! -f a.out ]] && compile_error=true
	2532	continue # ANDERENFALLS IST STATUS=1, FALLS A.OUT VORHANDEN
[197]	2533	elif [[ $localhost = lcsgib ]]
	2534	then
[540]	2535	printf " compiler is called via ssh on \"bicegate0\" \n"
	2536	ssh bicegate0 -l $usern ". /usr/share/modules/init/bash; $module_calls cd $TEMPDIR; make $mopts -f Makefile PROG=a.out F90=$compiler_name COPT=\"$cpp_options\" F90FLAGS=\"$fopts\" LDFLAGS=\"$lopts\" "
[197]	2537	[[ ! -f a.out ]] && compile_error=true
	2538	continue # ANDERENFALLS IST STATUS=1, FALLS A.OUT VORHANDEN
	2539	elif [[ $localhost = lcsgih ]]
	2540	then
[540]	2541	printf " compiler is called via ssh on \"hicegate0\" \n"
	2542	ssh hicegate0 -l $usern ". /usr/share/modules/init/bash; $module_calls cd $TEMPDIR; make $mopts -f Makefile PROG=a.out F90=$compiler_name COPT=\"$cpp_options\" F90FLAGS=\"$fopts\" LDFLAGS=\"$lopts\" 2>&1 "
[197]	2543	[[ ! -f a.out ]] && compile_error=true
	2544	continue # ANDERENFALLS IST STATUS=1, FALLS A.OUT VORHANDEN
[1]	2545	else
[118]	2546	[[ $localhost = lctit ]] && export LM_LICENSE_FILE=27050@tggls
[544]	2547	[[ $localhost = lcxt4 ]] && . /opt/modules/default/init/ksh
[493]	2548	[[ "$module_calls" != "" ]] && eval $module_calls
[475]	2549	make $mopts -f Makefile PROG=a.out F90=$compiler_name COPT="$cpp_options" F90FLAGS="$fopts" LDFLAGS="$lopts"
[82]	2550	fi
[1]	2551
	2552	if [[ $? != 0 \|\| "$compile_error" = true \|\| "$module_compile_error" = true ]]
	2553	then
	2554	printf "\n +++ error occured while compiling or linking"
	2555	locat=compile
[181]	2556
[182]	2557	# WORKAROUND: REMOVE IF CONSTRUCT LATER, BUT KEEP THE EXIT!
[197]	2558	# if [[ $localhost != lcsgib && $localhost != lcsgih ]]
	2559	# then
[181]	2560	exit
[197]	2561	# else
	2562	# locat=normal
	2563	# fi
[1]	2564	else
	2565	printf "$striche\n *** compilation finished \n"
	2566	fi
	2567	fi
	2568
	2569
	2570	# FALLS NUR TESTWEISE KOMPILIERT WERDEN SOLLTE, IST MRUN JETZT FERTIG
	2571	if [[ $local_compile = true ]]
	2572	then
	2573	cd $HOME
	2574	rm -rf $TEMPDIR
	2575	locat=local_compile; exit
	2576	fi
	2577
	2578
	2579	# BEREITSTELLEN DER INPUT-DATEIEN
	2580	# SCHLEIFE UEBER ALLE VOM BENUTZER ANGEGEBENEN DATEIEN
	2581	(( i = 0 ))
	2582	while (( i < iin ))
	2583	do
	2584	(( i = i + 1 ))
	2585	if (( i == 1 ))
	2586	then
	2587	printf "\n\n *** providing INPUT-files:\n$striche"
	2588	fi
	2589
	2590
	2591	# OPTIONALE DATEIEN BEI NICHTVORHANDENSEIN UEBERGEHEN
	2592	if [[ "${transin[$i]}" = unavailable ]]
	2593	then
	2594	if [[ "${extin[$i]}" = "" \|\| "${extin[$i]}" = " " ]]
	2595	then
	2596	printf "\n +++ WARNING: input file \"${pathin[$i]}/${afname}${endin[$i]}\" "
	2597	printf "\n is not available!"
	2598	else
	2599	printf "\n +++ WARNING: input file \"${pathin[$i]}/${afname}${endin[$i]}.${extin[$i]}\" "
	2600	printf "\n is not available!"
	2601	fi
	2602	continue
	2603	fi
	2604
	2605	# PRUEFEN, OB EINZELDATEI ODER DATEI PRO PROZESSOR
	2606	files_for_pes=false; datentyp=file
	2607	if [[ "${actionin[$i]}" = pe && -n $numprocs ]]
	2608	then
	2609	files_for_pes=true; datentyp=directory
	2610	actionin[$i]=""
	2611	elif [[ "${actionin[$i]}" = pe && ! -n $numprocs ]]
	2612	then
	2613	actionin[$i]=""
	2614	elif [[ "${actionin[$i]}" = arpe && -n $numprocs ]]
	2615	then
	2616	files_for_pes=true; datentyp=directory
	2617	actionin[$i]="ar"
	2618	elif [[ "${actionin[$i]}" = arpe && ! -n $numprocs ]]
	2619	then
	2620	actionin[$i]="ar"
	2621	elif [[ "${actionin[$i]}" = flpe && -n $numprocs ]]
	2622	then
	2623	files_for_pes=true; datentyp=directory
	2624	actionin[$i]="fl"
	2625	elif [[ "${actionin[$i]}" = flpe && ! -n $numprocs ]]
	2626	then
	2627	actionin[$i]="fl"
	2628	fi
	2629
	2630	if [[ $files_for_pes = true ]]
	2631	then
	2632	printf "\n >>> INPUT: ${absnamein[$i]}/.... to ${localin[$i]}"
	2633	else
	2634	printf "\n >>> INPUT: ${absnamein[$i]} to ${localin[$i]}"
	2635	fi
	2636
	2637	# INPUT-DATEI FUER EINEN FORTSETZUNGSLAUF. ES WIRD GEPRUEFT,
	2638	# OB DIESE DATEI NOCH AUF DEM TEMPORAEREN DATENKATALOG VORHANDEN
	2639	# IST. FALLS NICHT, WIRD VERSUCHT, SIE ANSCHLIESSEND VOM ARCHIV-
	2640	# SERVER ZU HOLEN
	2641	if [[ "${actionin[$i]}" = fl ]]
	2642	then
	2643	printf "\n $datentyp will be fetched from temporary directory \"${tmp_data_catalog}\" !"
	2644	if [[ $files_for_pes = false ]]
	2645	then
	2646	if [[ -f "$tmp_data_catalog/${frelin[$i]}" ]]
	2647	then
	2648	ln $tmp_data_catalog/${frelin[$i]} ${localin[$i]}
	2649	got_tmp[$i]=true
	2650	elif [[ -f "$WORK/${frelin[$i]}" && $ignore_archive_error = true ]]
	2651	then
	2652	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" !"
	2653	printf "\n *** trying to use backup copy in \"$WORK\" "
	2654	cp $WORK/${frelin[$i]} ${localin[$i]}
	2655	else
	2656	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" "
	2657	printf "\n or \"$tmp_data_catalog\" does not exist!"
	2658	printf "\n *** trying to get copy from archive"
	2659	actionin[$i]=ar
	2660	fi
	2661	else
	2662	if [[ -d "$tmp_data_catalog/${frelin[$i]}" ]]
	2663	then
	2664	mkdir ${localin[$i]}
[149]	2665	cd $tmp_data_catalog/${frelin[$i]}
	2666	for file in $(ls *)
	2667	do
	2668	ln $file $TEMPDIR/${localin[$i]}
	2669	done
	2670	cd $TEMPDIR
[1]	2671	got_tmp[$i]=true
	2672	elif [[ -d "$WORK/${frelin[$i]}" && $ignore_archive_error = true ]]
	2673	then
	2674	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" !"
	2675	printf "\n *** trying to use backup copy in \"$WORK\" "
	2676	cp -r $WORK/${frelin[$i]} ${localin[$i]}
	2677	else
	2678	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" "
	2679	printf "\n or \"$tmp_data_catalog\" does not exist!"
	2680	printf "\n *** trying to get copy from archive"
	2681	actionin[$i]=ar
	2682	fi
	2683	fi
	2684	fi
	2685
	2686
	2687	# DATEI LIEGT AUF ARCHIV-SERVER
	2688	if [[ "${actionin[$i]}" = ar ]]
	2689	then
	2690
	2691	if [[ $files_for_pes = false ]]
	2692	then
	2693	printf "\n file will be restored from archive-system ($archive_system)!"
	2694	else
	2695	printf "\n directory will be restored from archive-system ($archive_system)!"
	2696	fi
	2697
	2698	file_restored=false
	2699
	2700	if [[ $archive_system = asterix ]]
	2701	then
	2702	do_stagein=true
	2703	(( stagein_anz = 0 ))
	2704	while [[ $do_stagein = true ]]
	2705	do
	2706	if [[ $files_for_pes = false ]]
	2707	then
	2708	stagein -O ${frelin[$i]} > STAGEIN_OUTPUT
	2709	else
	2710	stagein -t -O ${frelin[$i]} > STAGEIN_OUTPUT
	2711	fi
	2712	cat STAGEIN_OUTPUT
	2713	if [[ $(grep -c "st.msg:i24" STAGEIN_OUTPUT) != 0 ]]
	2714	then
	2715	file_restored=true
	2716	do_stagein=false
	2717	else
	2718	(( stagein_anz = stagein_anz + 1 ))
	2719	if (( stagein_anz == 10 ))
	2720	then
	2721	printf "\n +++ stagein stoped after 10 tries"
	2722	locat=stage
	2723	exit
	2724	fi
	2725	printf "\n +++ restoring from archive failed, trying again:"
	2726	sleep 900
	2727	fi
	2728	done
	2729	elif [[ $archive_system = DMF ]]
	2730	then
	2731	if [[ $files_for_pes = false ]]
	2732	then
	2733	printf "\n +++ restoring of single files impossible with $archive_system !\n"
	2734	locat=DMF
	2735	exit
	2736	else
	2737	find $ARCHIVE/${frelin[$i]} -type m -print \| dmget
	2738	cp -r $ARCHIVE/${frelin[$i]} $PWD
	2739	file_restored=true
	2740	fi
	2741	elif [[ $archive_system = tivoli ]]
	2742	then
	2743	if [[ $files_for_pes = false ]]
	2744	then
[399]	2745	if [[ $localhost = lcsgih ]]
[1]	2746	then
[399]	2747	ssh $usern@hicedata.hlrn.de "cp $PERM/${frelin[$i]} $PWD"
[1]	2748	else
[399]	2749	ssh $usern@bicedata.hlrn.de "cp $PERM/${frelin[$i]} $PWD"
[1]	2750	fi
	2751	else
	2752	(( inode = 0 ))
	2753	while (( inode < nodes ))
	2754	do
[399]	2755	if [[ $localhost = lcsgih ]]
[1]	2756	then
[399]	2757	ssh $usern@hicedata.hlrn.de "cd $PWD; tar xf $PERM/${frelin[$i]}/${frelin[$i]}.node_$inode.tar"
[1]	2758	else
[399]	2759	ssh $usern@bicedata.hlrn.de "cd $PWD; tar xf $PERM/${frelin[$i]}/${frelin[$i]}.node_$inode.tar"
[1]	2760	fi
	2761	(( inode = inode + 1 ))
	2762	done
	2763	fi
	2764	file_restored=true
	2765	elif [[ $archive_system = ut ]]
	2766	then
	2767	if [[ $files_for_pes = false ]]
	2768	then
	2769	cp $UT/${frelin[$i]} .
	2770	else
	2771	(( inode = 0 ))
	2772	while (( inode < nodes ))
	2773	do
	2774	tar xf $UT/${frelin[$i]}/${frelin[$i]}.node_$inode.tar
	2775	(( inode = inode + 1 ))
	2776	done
	2777	fi
	2778	file_restored=true
	2779	else
	2780	printf "\n +++ archive_system=\"$archive_system\" restore impossible!"
	2781	locat=rearchive
	2782	exit
	2783	fi
	2784
	2785	if [[ $file_restored = true ]]
	2786	then
	2787
	2788	# DATEI AUCH AUF TEMPORAERES DATENVERZEICHNIS LEGEN, DAMIT
	2789	# SIE BEI WEITEREN ZUGRIFFEN NOCH VORHANDEN IST
	2790	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog; chmod g+rx $tmp_data_catalog
	2791	if [[ $files_for_pes = false ]]
	2792	then
	2793	ln -f ${frelin[$i]} $tmp_data_catalog/${frelin[$i]}
	2794	else
	2795	mkdir $tmp_data_catalog/${frelin[$i]}
	2796	ln -f ${frelin[$i]}/* $tmp_data_catalog/${frelin[$i]}
	2797	fi
	2798	got_tmp[$i]=true
	2799
	2800	# DATEI UNTER LOKALEM NAMEN ZUR VERFUEGUNG STELLEN
	2801	mv ${frelin[$i]} ${localin[$i]}
	2802
	2803	fi
	2804	fi
	2805
	2806
	2807	# DATEI LIEGT IM VOM BENUTZER ANGEGEBENEN VERZEICHNIS
	2808	if [[ "${actionin[$i]}" = "" \|\| "${actionin[$i]}" = "di" \|\| "${actionin[$i]}" = "npe" ]]
	2809	then
	2810
	2811	if [[ "${actionin[$i]}" = "npe" && -n $numprocs ]]
	2812	then
	2813
	2814	# DATEI WIRD FUER DIE PROZESSOREN EINES PARALLERECHNERS BEREITGESTELLT
	2815	printf "\n file will be provided for $numprocs processors"
	2816	mkdir ${localin[$i]}
	2817	ival=$numprocs
	2818	(( ii = 0 ))
	2819	while (( ii <= ival-1 ))
	2820	do
	2821	if (( ii < 10 ))
	2822	then
	2823	cp ${absnamein[$i]} ${localin[$i]}/_000$ii
	2824	elif (( ii < 100 ))
	2825	then
	2826	cp ${absnamein[$i]} ${localin[$i]}/_00$ii
	2827	elif (( ii < 1000 ))
	2828	then
	2829	cp ${absnamein[$i]} ${localin[$i]}/_0$ii
	2830	else
	2831	cp ${absnamein[$i]} ${localin[$i]}/_$ii
	2832	fi
	2833	(( ii = ii + 1 ))
	2834	done
	2835
	2836	else
	2837
	2838	if [[ $files_for_pes = true ]]
	2839	then
	2840
	2841	# DIE DEN PROZESSOREN EINES PARALLELRECHNERS ZUGEHOERIGEN
	2842	# DATEIEN WERDEN BEREITGESTELLT, INDEM ZUERST DER GESAMTE
	2843	# KATALOGINHALT KOPIERT UND DANN DIE EINZELNEN DATEIEN
	2844	# PER MOVE UMBENANNT WERDEN
	2845	printf "\n providing $numprocs files for the respective processors"
	2846	mkdir ${localin[$i]}
[183]	2847	if [[ $link_local_input = true ]]
	2848	then
	2849	printf " using ln -f\n"
	2850	cd ${absnamein[$i]}
	2851	for file in $(ls *)
	2852	do
	2853	ln -f $file ${localin[$i]}
	2854	done
	2855	cd $TEMPDIR
	2856	fi
	2857	# If "ln -f" fails of if "$link_local_input = false" do a normal "cp -r"
	2858	if [[ ! -f "${localin[$i]}/_0000" ]]
	2859	then
	2860	if [[ $link_local_input = true ]]
	2861	then
	2862	printf " ln failed for .../_0000, using cp...\n"
	2863	fi
	2864	cp -r ${absnamein[$i]}/* ${localin[$i]}
	2865	fi
[1]	2866
	2867	else
	2868	# BEREITSTELLUNG AUF EINPROZESSORRECHNERN
[183]	2869	if [[ $link_local_input = true ]]
	2870	then
	2871	printf " using ln -f\n"
	2872	ln -f ${absnamein[$i]} ${localin[$i]}
	2873	fi
	2874	# If "ln -f" fails of if "$link_local_input = false" do a normal "cp"
	2875	if [[ ! -f "${localin[$i]}" ]]
	2876	then
	2877	if [[ $link_local_input = true ]]
	2878	then
	2879	printf " ln failed, using cp...\n"
	2880	fi
	2881	cp ${absnamein[$i]} ${localin[$i]}
	2882	fi
[1]	2883	fi
	2884	fi
	2885	fi
	2886
	2887	done
	2888	if (( i != 0 ))
	2889	then
	2890	printf "\n$striche\n *** all INPUT-files provided \n"
	2891	fi
	2892
	2893
	2894	# EVENTUELLE INPUT-KOMMANDOS ABARBEITEN
	2895	(( i = 0 ))
	2896	while (( i < iic ))
	2897	do
	2898	(( i = i + 1 ))
	2899	if (( i == 1 ))
	2900	then
	2901	printf "\n\n *** execution of INPUT-commands:\n$striche"
	2902	fi
	2903	printf "\n >>> ${in_command[$i]}"
	2904	eval ${in_command[$i]}
	2905	if (( i == iic ))
	2906	then
	2907	printf "\n$striche\n"
	2908	fi
	2909	done
	2910
	2911
	2912	# VERBLEIBENDE CPU-ZEIT BERECHNEN
	2913	cpurest=${cpumax}.
	2914
	2915
[260]	2916	# START DVR STREAMING SERVER
	2917	if [[ $(echo $package_list \| grep -c dvrp_graphics) != 0 ]]
	2918	then
	2919	if [[ "$dvr_server" != "" ]]
	2920	then
	2921
	2922	printf "\n\n *** preparing the dvr streaming server configuration file"
	2923
	2924	# Check, if a dvr server is already running
	2925	running_dvrserver_id=`echo $(ps -edaf \| grep .dvrserver.config \| grep -v grep) \| cut -d" " -f2`
	2926	if [[ "$running_dvrserver_id" != "" ]]
	2927	then
	2928
[261]	2929	printf "\n\n +++ WARNING: A dvr server with id=$running_dvrserver_id is already running!"
[260]	2930	printf "\n This server is used instead starting a new one!"
[261]	2931	printf "\n If required, script \"process_dvr_output\" has to be run manually."
[260]	2932
	2933	else
	2934
	2935	# COPY CONFIGURATION FILE FOR STREAMING SERVER FROM REPOSITORY TO HERE
	2936	if [[ -f ${PALM_BIN}/.dvrserver.config ]]
	2937	then
	2938	cp ${PALM_BIN}/.dvrserver.config .
	2939
	2940	# Entering the BASEDIR, UID and GID into this file
	2941	user_id=`id -u`
	2942	group_id=`id -g`
	2943	# & is needed as seperator, because TEMPDIR contains /
	2944	sed "s&<replace by dvr data directory>&${TEMPDIR}&g" .dvrserver.config > .dvrserver.1
	2945	sed "s/<replace by user id>/$user_id/g" .dvrserver.1 > .dvrserver.2
	2946	sed "s/<replace by group id>/$group_id/g" .dvrserver.2 > .dvrserver.3
	2947	mv .dvrserver.3 .dvrserver.config
	2948	rm .dvrserver.1 .dvrserver.2
	2949
	2950	# Start dvr server in background, get his id and print on terminal
	2951	$dvr_server .dvrserver.config >> DVR_LOGFILE 2>&1 &
	2952	dvrserver_id=`echo $(ps -edaf \| grep .dvrserver.config) \| cut -d" " -f2`
	2953	printf "\n *** streaming server with id=$dvrserver_id is started in background"
	2954	local_dvrserver_running=.TRUE.
	2955	else
	2956	printf "\n +++ missing file \".dvrserver.config\" in directory:"
	2957	printf "\n \"$PALM_BIN\" "
	2958	locat=dvr
	2959	exit
	2960	fi
	2961
	2962	fi
	2963
	2964	else
	2965	printf "\n\n --- INFORMATIVE: no dvr streaming server will be started"
	2966	fi
	2967	fi
	2968
	2969
	2970	# NAMELIST-DATEI MIT WERTEN VON ENVIRONMENT-VARIABLEN ERZEUGEN (ZU
	2971	# LESEN VON PALM)
	2972	cat > ENVPAR << %%END%%
	2973	&envpar run_identifier = '$fname', host = '$localhost',
	2974	write_binary = '$write_binary', tasks_per_node = $tasks_per_node,
	2975	maximum_cpu_time_allowed = ${cpumax}.,
	2976	revision = '$global_revision',
	2977	local_dvrserver_running = $local_dvrserver_running /
	2978
	2979	%%END%%
	2980
	2981
[1]	2982	# PROGRAMMSTART
	2983	printf "\n\n *** execution starts in directory\n \"`pwd`\"\n$striche\n"
	2984	PATH=$PATH:$TEMPDIR
	2985
[359]	2986	# MPI debug option (argument checking, slows down execution due to increased latency)
	2987	if [[ "$mpi_debug" = true ]]
	2988	then
	2989	export MPI_CHECK_ARGS=1
	2990	printf "\n +++ MPI_CHECK_ARGS=$MPI_CHECK_ARGS"
	2991	fi
	2992
[1]	2993	if [[ "$cond1" = debug \|\| "$cond2" = debug ]]
	2994	then
	2995	if [[ "$ENVIRONMENT" = BATCH ]]
	2996	then
[211]	2997	if [[ $(echo $localhost \| cut -c1-5) != lcsgi ]]
	2998	then
	2999	printf "\n +++ debug is allowed in interactive mode only"
	3000	locat=debug
	3001	exit
	3002	fi
[1]	3003	fi
[5]	3004	if [[ $localhost = decalpha ]]
[1]	3005	then
	3006	dxladebug a.out
	3007	elif [[ $localhost = ibmb \|\| $localhost = ibmh ]]
	3008	then
	3009
	3010	# SETUP THE IBM MPI ENVIRONMENT
	3011	export MP_SHARED_MEMORY=yes
	3012	export AIXTHREADS_SCOPE=S
	3013	export OMP_NUM_THREADS=$threads_per_task
	3014	export AUTHSTATE=files
	3015	export XLFRTEOPTS="nlwidth=132:err_recovery=no" # RECORD-LENGTH OF NAMELIST-OUTPUT
	3016
	3017	# FOLLOWING OPTIONS ARE MANDATORY FOR TOTALVIEW
	3018	export MP_ADAPTER_USE=shared
	3019	export MP_CPU_USE=multiple
	3020	export MP_TIMEOUT=1200
	3021
	3022	unset MP_TASK_AFFINITY
	3023
	3024	# SO FAR, TOTALVIEW NEEDS HOSTFILE MECHANISM FOR EXECUTION
	3025	#(( ii = 1 ))
	3026	#while (( ii <= $numprocs ))
	3027	#do
	3028	# echo $localhost_realname >> hostfile
	3029	# (( ii = ii + 1 ))
	3030	#done
	3031	#export MP_HOSTFILE=hostfile
	3032
	3033	if [[ "$LOADLBATCH" = yes ]]
	3034	then
	3035	totalview poe a.out $ROPTS
	3036	else
	3037	echo totalview poe -a a.out -procs $numprocs -rmpool 0 -nodes 1 $ROPTS
	3038	export TVDSVRLAUNCHCMD=ssh
	3039	totalview poe -a a.out -procs $numprocs -rmpool 0 -nodes 1 $ROPTS
	3040	fi
[211]	3041	elif [[ $(echo $localhost \| cut -c1-5) = lcsgi ]]
	3042	then
	3043	# CURRENTLY NO DEBUGGER ON LCSGI
	3044	if [[ $run_coupled_model = true ]]
	3045	then
	3046	printf "\n +++ no debug in coupled mode available on \"$localhost\" "
	3047	locat=debug
	3048	exit
[223]	3049	else
	3050	echo "no_coupling" > runfile_atmos
[211]	3051	fi
	3052	(( ii = $numprocs / $threads_per_task ))
	3053	export OMP_NUM_THREADS=$threads_per_task
	3054	echo "OMP_NUM_THREADS=$OMP_NUM_THREADS"
	3055	if [[ $threads_per_task != 1 ]]
	3056	then
	3057	printf "\n threads per task: $threads_per_task"
	3058	fi
	3059	printf "\n\n"
[223]	3060	if [[ $( echo $mpilib \| cut -c1-3 ) = mpt ]]
	3061	then
	3062	# export MPI_LAUNCH_TIMEOUT=360
	3063	if [[ "$totalview" = true ]]
	3064	then
	3065	printf "\n running totalview debugger"
	3066	mpiexec_mpt -tv -n $ii ./a.out $ROPTS < runfile_atmos
	3067	else
	3068	mpiexec_mpt -np $ii ./a.out $ROPTS < runfile_atmos
	3069	fi
	3070	elif [[ $( echo $mpilib \| cut -c1-3 ) = mva ]]
	3071	then
	3072	# ulimit -s 300000 # A too large stack size causes problems
	3073	# export MV2_NUM_PORTS=2
	3074	# export MV2_CPU_MAPPING=0:1:2:3
[362]	3075	if [[ "$totalview" = true ]]
	3076	then
	3077	printf "\n running totalview debugger"
	3078	mpiexec -tv ./a.out $ROPTS < runfile_atmos
	3079	else
	3080	mpiexec ./a.out $ROPTS < runfile_atmos
	3081	fi
[223]	3082	fi
[1]	3083	else
	3084	printf "\n +++ no debug available on \"$localhost\" "
	3085	printf "\n or not implemented in mrun so far"
	3086	locat=debug
	3087	exit
	3088	fi
	3089	else
	3090	if [[ -n $numprocs ]]
	3091	then
	3092	# RUNNING THE PROGRAM ON PARALLEL MACHINES
	3093	if [[ $(echo $host \| cut -c1-3) = ibm ]]
	3094	then
	3095	# SETUP THE IBM MPI ENVIRONMENT
[312]	3096	if [[ $host != ibmh ]]
	3097	then
	3098	export MP_SHARED_MEMORY=yes
	3099	export AIXTHREAD_SCOPE=S
	3100	export OMP_NUM_THREADS=$threads_per_task
	3101	export XLSMPOPTS="spins=0:yields=0:stack=20000000"
	3102	export AUTHSTATE=files
	3103	export XLFRTEOPTS="nlwidth=132:err_recovery=no" # RECORD-LENGTH OF NAMELIST-OUTPUT
	3104	# export MP_PRINTENV=yes
[1]	3105
[312]	3106	# TUNING-VARIABLEN ZUR VERBESSERUNG DER KOMMUNIKATION
	3107	# ZEIGEN ABER DERZEIT (SEP 04, FEDERATION) KAUM WIRKUNG
	3108	export MP_WAIT_MODE=poll
	3109	[[ $node_usage = not_shared ]] && export MP_SINGLE_THREAD=yes
	3110	fi
[1]	3111	if [[ "$LOADLBATCH" = yes ]]
	3112	then
	3113	printf "\n--- Control: OMP_NUM_THREADS = \"$OMP_NUM_THREADS\" \n"
	3114	if [[ "$cond1" = hpmcount \|\| "$cond2" = hpmcount ]]
	3115	then
[102]	3116	/opt/optibm/HPM_2_4_1/bin/hpmcount a.out $ROPTS
[1]	3117	else
[343]	3118	if [[ $run_coupled_model = false ]]
	3119	then
	3120	if [[ "$ocean_file_appendix" = true ]]
	3121	then
	3122	echo "precursor_ocean" > runfile_atmos
	3123	else
	3124	echo "precursor_atmos" > runfile_atmos
	3125	fi
	3126	else
	3127	(( iia = $numprocs_atmos / $threads_per_task ))
	3128	(( iio = $numprocs_ocean / $threads_per_task ))
	3129	printf "\n coupled run ($iia atmosphere, $iio ocean)"
	3130	printf "\n using $coupled_mode coupling"
	3131	printf "\n\n"
	3132	echo "coupled_run $iia $iio" > runfile_atmos
	3133	fi
	3134	poe ./a.out $ROPTS < runfile_atmos
[1]	3135	fi
	3136	else
	3137	if [[ $localhost = ibmb \|\| $localhost = ibmh \|\| $localhost = ibms ]]
	3138	then
[102]	3139	poe a.out -procs $numprocs -nodes 1 -rmpool 0 $ROPTS
[1]	3140	elif [[ $localhost = ibmy ]]
	3141	then
	3142	if [[ -f $hostfile ]]
	3143	then
	3144	cp $hostfile hostfile
	3145	else
	3146	(( ii = 1 ))
	3147	while (( ii <= $numprocs ))
	3148	do
	3149	echo $localhost_realname >> hostfile
	3150	(( ii = ii + 1 ))
	3151	done
	3152	fi
	3153	export MP_HOSTFILE=hostfile
[331]	3154	if [[ $run_coupled_model = false ]]
	3155	then
	3156	if [[ "$ocean_file_appendix" = true ]]
	3157	then
	3158	echo "precursor_ocean" > runfile_atmos
	3159	else
	3160	echo "precursor_atmos" > runfile_atmos
	3161	fi
	3162	else
	3163	(( iia = $numprocs_atmos / $threads_per_task ))
	3164	(( iio = $numprocs_ocean / $threads_per_task ))
	3165	printf "\n coupled run ($iia atmosphere, $iio ocean)"
	3166	printf "\n using $coupled_mode coupling"
	3167	printf "\n\n"
	3168	echo "coupled_run $iia $iio" > runfile_atmos
	3169	fi
	3170	./a.out -procs $tasks_per_node $ROPTS < runfile_atmos
	3171
[1]	3172	else
	3173	if [[ "$host_file" = "" ]]
	3174	then
	3175	printf "\n +++ no hostfile given in configuration file"
	3176	locat=config_file
	3177	exit
	3178	else
	3179	eval host_file=$host_file
	3180	fi
	3181	export MP_HOSTFILE=$host_file
[102]	3182	poe a.out -procs $numprocs -tasks_per_node $numprocs $ROPTS
[1]	3183	fi
	3184	fi
[251]	3185	elif [[ $host = nech \|\| $host = necriam ]]
[1]	3186	then
	3187	(( ii = nodes ))
	3188	if [[ $ii = 1 ]]
	3189	then
	3190	export F_ERRCNT=0 # acceptable number of errors before program is stopped
	3191	export MPIPROGINF=YES
[61]	3192	# export F_TRACE=YES\|FMT1\|FMT2 # output of ftrace informations to job protocol
[1]	3193	echo "*** execution on single node with mpirun"
[102]	3194	mpirun -np $numprocs ./a.out $ROPTS
[1]	3195	else
	3196	(( i = 0 ))
	3197	while (( i < ii ))
	3198	do
	3199	echo "-h $i -p $tasks_per_node -e ./mpi_exec_shell" >> multinode_config
	3200	(( i = i + 1 ))
	3201	done
	3202
	3203	echo "#!/bin/sh" > mpi_exec_shell
	3204	echo " " >> mpi_exec_shell
	3205	echo "set -u" >> mpi_exec_shell
	3206	echo "F_ERRCNT=0" >> mpi_exec_shell
	3207	echo "MPIPROGINV=YES" >> mpi_exec_shell
	3208	echo "OMP_NUM_THREADS=$threads_per_task" >> mpi_exec_shell
	3209	echo "cpurest=$cpurest" >> mpi_exec_shell
	3210	echo "fname=$fname" >> mpi_exec_shell
	3211	echo "localhost=$localhost" >> mpi_exec_shell
	3212	echo "return_addres=$return_addres" >> mpi_exec_shell
	3213	echo "return_username=$return_username" >> mpi_exec_shell
	3214	echo "tasks_per_node=$tasks_per_node" >> mpi_exec_shell
	3215	echo "write_binary=$write_binary" >> mpi_exec_shell
	3216	echo "use_seperate_pe_for_dvrp_output=$use_seperate_pe_for_dvrp_output" >> mpi_exec_shell
	3217	echo " " >> mpi_exec_shell
	3218	echo "export F_ERRCNT" >> mpi_exec_shell
	3219	echo "export MPIPROGINV" >> mpi_exec_shell
	3220	echo "export OMP_NUM_THREADS" >> mpi_exec_shell
	3221	echo "export cpurest" >> mpi_exec_shell
	3222	echo "export fname" >> mpi_exec_shell
	3223	echo "export localhost" >> mpi_exec_shell
	3224	echo "export return_addres" >> mpi_exec_shell
	3225	echo "export return_username" >> mpi_exec_shell
	3226	echo "export tasks_per_node" >> mpi_exec_shell
	3227	echo "export write_binary" >> mpi_exec_shell
	3228	echo "export use_seperate_pe_for_dvrp_output" >> mpi_exec_shell
	3229	echo " " >> mpi_exec_shell
[102]	3230	echo "exec ./a.out" >> mpi_exec_shell
[1]	3231
	3232	chmod u+x mpi_exec_shell
	3233	export MPIPROGINF=YES
	3234	mpirun -f multinode_config &
	3235	wait
	3236
	3237	fi
[440]	3238	elif [[ $(echo $host \| cut -c1-2) = lc && $host != lckyoto && $host != lctit ]]
[1]	3239	then
	3240
	3241	# COPY HOSTFILE FROM SOURCE DIRECTORY OR CREATE IT, IF IT
	3242	# DOES NOT EXIST
[179]	3243	if [[ $host != lcsgih && $host != lcsgib ]]
[1]	3244	then
[179]	3245	if [[ -f $hostfile ]]
	3246	then
	3247	cp $hostfile hostfile
	3248	else
	3249	(( ii = 1 ))
	3250	while (( ii <= $numprocs / $threads_per_task ))
	3251	do
	3252	echo $localhost_realname >> hostfile
	3253	(( ii = ii + 1 ))
	3254	done
	3255	fi
	3256	eval zeile=\"`head -n $ii hostfile`\"
	3257	printf "\n *** running on: $zeile"
[1]	3258	fi
[179]	3259
[1]	3260	(( ii = $numprocs / $threads_per_task ))
	3261	export OMP_NUM_THREADS=$threads_per_task
[246]	3262	# echo "OMP_NUM_THREADS=$OMP_NUM_THREADS"
[1]	3263	if [[ $threads_per_task != 1 ]]
	3264	then
[405]	3265	# increase stack size to unlimited, because large runs
	3266	# may abort otherwise
	3267	ulimit -Ss unlimited
	3268	printf "\n threads per task: $threads_per_task stacksize: unlimited"
[1]	3269	fi
[102]	3270	if [[ $run_coupled_model = false ]]
[1]	3271	then
[291]	3272	if [[ "$ocean_file_appendix" = true ]]
	3273	then
	3274	echo "precursor_ocean" > runfile_atmos
	3275	else
	3276	echo "precursor_atmos" > runfile_atmos
	3277	fi
[102]	3278	printf "\n\n"
[179]	3279	if [[ $host = lcsgih \|\| $host = lcsgib ]]
[164]	3280	then
[221]	3281	if [[ $( echo $mpilib \| cut -c1-3 ) = mpt ]]
	3282	then
[366]	3283	# MPI_DSM_DISTRIBUTE not necessary when MPI_DSM_CPULIST is set
	3284	# export MPI_DSM_DISTRIBUTE=1
	3285	# MPI_DSM_CPULIST: pin MPI processes to cores
[377]	3286	if [[ $use_openmp = false ]]
	3287	then
[412]	3288	if [[ "$sgi_feature" = ice2 ]]
	3289	then
	3290	export MPI_DSM_CPULIST="0,4,1,5,2,6,3,7:allhosts"
	3291	else
	3292	export MPI_DSM_CPULIST="0,1,4,5,2,3,6,7:allhosts"
	3293	fi
[377]	3294	fi
[366]	3295	# MPI_IB_RAILS: use both IB rails on ICE2
	3296	export MPI_BUFS_PER_HOST=512
	3297	export MPI_IB_RAILS=2
[369]	3298	# NECESSARY, IF MORE THAN 4096 PEs ARE USED
	3299	export MPI_CONNECTIONS_THRESHOLD=8192
[412]	3300	echo "*** MPI_DSM_CPULIST=$MPI_DSM_CPULIST"
[562]	3301	export MPI_TYPE_DEPTH=20
	3302	echo "*** MPI_TYPE_DEPTH=$MPI_TYPE_DEPTH"
[223]	3303	mpiexec_mpt -np $ii ./a.out $ROPTS < runfile_atmos
[388]	3304
	3305	# next is test for openmp usage
	3306	# mpiexec -n $ii -pernode ./a.out $ROPTS < runfile_atmos
[221]	3307	elif [[ $( echo $mpilib \| cut -c1-3 ) = mva ]]
	3308	then
[374]	3309	export MV2_NUM_PORTS=2
[376]	3310	# The default setting of MV2_CPU_MAPPING gives best results
[405]	3311	# export MV2_ENABLE_AFFINITY=1
[376]	3312	# export MV2_CPU_MAPPING=0,1,4,5,2,3,6,7
[412]	3313	# if [[ "$sgi_feature" = ice2 ]]
	3314	# then
	3315	# export MV2_CPU_MAPPING=0,4,1,5,2,6,3,7
	3316	# else
	3317	# export MV2_CPU_MAPPING=0,1,4,5,2,3,6,7
	3318	# fi
	3319	echo "*** MV2_CPU_MAPPING=$MV2_CPU_MAPPING"
[405]	3320	if [[ $threads_per_task != 1 ]]
	3321	then
	3322	mpiexec -npernode 1 ./a.out $ROPTS < runfile_atmos
	3323	else
	3324	mpiexec -np $ii ./a.out $ROPTS < runfile_atmos
	3325	fi
[221]	3326	fi
[437]	3327	elif [[ $host = lcxt4 \|\| $host = lcxt5m ]]
[179]	3328	then
[544]	3329	aprun -n $ii -N $tasks_per_node a.out $ROPTS < runfile_atmos
[164]	3330	else
[223]	3331	mpiexec -machinefile hostfile -n $ii a.out < runfile_atmos $ROPTS
[164]	3332	fi
[1]	3333	else
[164]	3334
[206]	3335	# currently there is no full MPI-2 support on ICE and XT4
	3336	(( iia = $numprocs_atmos / $threads_per_task ))
	3337	(( iio = $numprocs_ocean / $threads_per_task ))
	3338	printf "\n coupled run ($iia atmosphere, $iio ocean)"
	3339	printf "\n using $coupled_mode coupling"
[102]	3340	printf "\n\n"
[164]	3341
[206]	3342	if [[ $coupled_mode = "mpi2" ]]
[164]	3343	then
[206]	3344	echo "atmosphere_to_ocean $iia $iio" > runfile_atmos
	3345	echo "ocean_to_atmosphere $iia $iio" > runfile_ocean
	3346	if [[ $host = lcsgih \|\| $host = lcsgib ]]
	3347	then
[197]	3348
[221]	3349	if [[ $( echo $mpilib \| cut -c1-3 ) = mpt ]]
	3350	then
	3351	# export MPI_LAUNCH_TIMEOUT=360
	3352	mpiexec_mpt -np $iia ./a.out $ROPTS < runfile_atmos &
	3353	mpiexec_mpt -np $iio ./a.out $ROPTS < runfile_ocean &
	3354	elif [[ $( echo $mpilib \| cut -c1-3 ) = mva ]]
	3355	then
	3356	# ulimit -s 300000 # A too large stack size causes problems
	3357	# export MV2_NUM_PORTS=2
	3358	# export MV2_CPU_MAPPING=0:1:2:3
	3359	mpiexec -n $iia ./a.out $ROPTS < runfile_atmos &
	3360	mpiexec -n $iio ./a.out $ROPTS < runfile_ocean &
	3361	fi
[197]	3362
[437]	3363	elif [[ $host = lcxt4 \|\| $host = lcxt5m ]]
[206]	3364	then
[197]	3365
[206]	3366	aprun -n $iia -N $tasks_per_node a.out < runfile_atmos $ROPTS &
	3367	aprun -n $iio -N $tasks_per_node a.out < runfile_ocean $ROPTS &
	3368
	3369	else
	3370	# WORKAROUND BECAUSE mpiexec WITH -env option IS NOT AVAILABLE ON SOME SYSTEMS
	3371	mpiexec -machinefile hostfile -n $iia a.out $ROPTS < runfile_atmos &
	3372	mpiexec -machinefile hostfile -n $iio a.out $ROPTS < runfile_ocean &
	3373	# mpiexec -machinefile hostfile -n $iia -env coupling_mode atmosphere_to_ocean a.out $ROPTS &
	3374	# mpiexec -machinefile hostfile -n $iio -env coupling_mode ocean_to_atmosphere a.out $ROPTS &
	3375	fi
	3376	wait
	3377
[164]	3378	else
	3379
[206]	3380	echo "coupled_run $iia $iio" > runfile_atmos
	3381	if [[ $host = lcsgih \|\| $host = lcsgib ]]
	3382	then
	3383
[221]	3384	if [[ $( echo $mpilib \| cut -c1-3 ) = mpt ]]
	3385	then
	3386	# export MPI_LAUNCH_TIMEOUT=360
	3387	mpiexec_mpt -np $ii ./a.out $ROPTS < runfile_atmos
	3388	elif [[ $( echo $mpilib \| cut -c1-3 ) = mva ]]
	3389	then
	3390	# ulimit -s 300000 # A too large stack size causes problems
	3391	# export MV2_NUM_PORTS=2
	3392	# export MV2_CPU_MAPPING=0:1:2:3
	3393	mpiexec ./a.out $ROPTS < runfile_atmos
	3394	fi
[206]	3395
[437]	3396	elif [[ $host = lcxt4 \|\| $host = lcxt5m ]]
[206]	3397	then
	3398
	3399	aprun -n $ii -N $tasks_per_node a.out < runfile_atmos $ROPTS
	3400
[367]	3401	elif [[ $host = lck ]]
	3402	then
	3403	mpiexec -n $ii ./a.out $ROPTS < runfile_atmos &
[206]	3404	fi
	3405	wait
[164]	3406	fi
[102]	3407
[206]	3408	fi
[1]	3409	elif [[ $host = decalpha ]]
	3410	then
[102]	3411	dmpirun -np $numprocs a.out $ROPTS
[440]	3412	elif [[ $host = lckyoto ]]
	3413	then
	3414	set -xv
	3415	export P4_RSHCOMMAND=plesh
	3416	echo " P4_RSHCOMMAND = $P4_RSHCOMMAND"
	3417	if [[ "$ENVIRONMENT" = BATCH ]]
	3418	then
[505]	3419	if [[ "$cond2" = fujitsu ]]
	3420	then
	3421	mpiexec -n $numprocs ./a.out $ROPTS # for fujitsu-compiler
	3422	elif [[ "cond2" = pgi ]]
	3423	then
	3424	mpirun -np $numprocs -machinefile ${QSUB_NODEINF} ./a.out $ROPTS
	3425	else
	3426	mpirun_rsh -np $numprocs -hostfile ${QSUB_NODEINF} MV2_USE_SRQ=0 ./a.out ${ROPTS} \|\| /bin/true
	3427	fi
[440]	3428	else
[505]	3429	if [[ "$cond2" = "" ]]
	3430	then
	3431	mpiruni_rsh -np $numprocs ./a.out $ROPTS # for intel
	3432	else
	3433	mpirun -np $numprocs ./a.out $ROPTS
	3434	fi
[440]	3435	fi
	3436	set +xv
[1]	3437	elif [[ $host = lctit ]]
	3438	then
	3439	export runfile=runfile.$kennung
	3440
	3441	echo "cd $PWD" > $runfile
	3442	echo "export OMP_NUM_THREADS=$OMP_NUM_THREADS" >> $runfile
	3443	echo "export cpurest=$cpurest" >> $runfile
	3444	echo "export fname=$fname" >> $runfile
	3445	echo "export localhost=$localhost" >> $runfile
	3446	echo "export return_addres=$return_addres" >> $runfile
	3447	echo "export return_username=$return_username" >> $runfile
	3448	echo "export tasks_per_node=$tasks_per_node" >> $runfile
	3449	echo "export write_binary=$write_binary" >> $runfile
	3450	echo "export use_seperate_pe_for_dvrp_output=$use_seperate_pe_for_dvrp_output" >> $runfile
	3451	echo "./a.out" >> $runfile
	3452	chmod u+x $runfile
	3453
	3454	if [[ "$QUEUE" = interactive ]]
	3455	then
[102]	3456	mpirun -np $numprocs a.out $ROPTS
[1]	3457	else
[127]	3458	(( mem_tsubame = $memory / 1024.0 ))
	3459	echo "Memory for Tsubame for each process in GB:", $mem_tsubame
[118]	3460	# n1ge -fore -g 1S060156 -mpi $numprocs -mem 4 -N palm -q $queue a.out $ROPTS
[265]	3461	# /n1ge/TITECH_GRID/tools/bin/n1ge -fore -g $group_number -mpi ${numprocs}:$tasks_per_node -mem $mem_tsubame -N palm -rt $minuten -q $queue a.out $ROPTS
	3462	n1ge -fore -g $group_number -mpi ${numprocs}:$tasks_per_node -mem $mem_tsubame -N palm -rt $minuten -q $queue a.out $ROPTS
[1]	3463	fi
	3464
	3465	rm $runfile
	3466	else
[102]	3467	mpprun -n $numprocs a.out $ROPTS
[1]	3468	fi
	3469	[[ $? != 0 ]] && execution_error=true
	3470
	3471
	3472	# PERFORMANCE-AUSWERTUNG MIT APPRENTICE
	3473	if [[ "$cond1" = apprentice \|\| "$cond2" = apprentice ]]
	3474	then
	3475	apprentice
	3476	fi
	3477	else
[102]	3478	a.out $ROPTS
[1]	3479	fi
	3480	fi
	3481	if [[ $? != 0 \|\| $execution_error = true ]]
	3482	then
	3483
	3484	# ABBRUCH BEI LAUFZEITFEHLER
[102]	3485	# [[ ! ( "$cond1" = debug \|\| "$cond2" = debug ) ]] && cat aout_output*
[1]	3486	printf "\n +++ runtime error occured"
	3487	locat=execution
	3488	exit
	3489	else
[102]	3490	# [[ ! ( "$cond1" = debug \|\| "$cond2" = debug ) ]] && cat aout_output*
[1]	3491	printf "\n$striche\n *** execution finished \n"
[260]	3492
[261]	3493	# Stop the dvr streaming server and process the dvr output in order
	3494	# to create dvrs- and html-files containing all streams
[260]	3495	if [[ "$dvrserver_id" != "" ]]
	3496	then
	3497	kill $dvrserver_id
	3498	printf "\n *** dvr server with id=$dvrserver_id has been stopped"
[261]	3499
[262]	3500	# If there is a directory, data have been output by the
	3501	# streaming server. Otherwise, user has chosen dvrp_output=local
	3502	if [[ -d DATA_DVR ]]
	3503	then
[261]	3504
[262]	3505	# Add the current dvr configuration file to the dvr output
	3506	# directory
	3507	cp .dvrserver.config DATA_DVR
	3508
	3509	# Process the dvr output (option -s for also generating
	3510	# sequence mode data)
	3511	process_dvr_output -d DATA_DVR -f $fname -s
	3512
	3513	else
	3514
	3515	# Process the local output
	3516	process_dvr_output -l -d DATA_DVR -f $fname
	3517
	3518	fi
	3519
	3520	elif [[ $(echo $package_list \| grep -c dvrp_graphics) != 0 ]]
	3521	then
	3522
	3523	# Process dvr output generated in local mode (dvrp_output=local)
	3524	process_dvr_output -l -d DATA_DVR -f $fname
	3525
[260]	3526	fi
[1]	3527	fi
	3528
	3529
	3530
[503]	3531	# Call of combine_plot_fields in order to merge single files written
	3532	# by each PE into one file.
	3533	if [[ ! -f ${PALM_BIN}/combine_plot_fields${block}.x ]]
	3534	then
	3535	printf "\n\n\n +++ WARNING: no combine_plot_fields found for given block \"$cond1 $cond2\""
	3536	printf "\n 2d- and/or 3d-data may be incomplete!"
	3537	printf "\n Run \"mbuild -u -h $localhost\" to generate utilities for this block.\n"
	3538	else
	3539	printf "\n\n\n *** post-processing: now executing \"combine_plot_fields${block}.x\" ..."
	3540	combine_plot_fields${block}.x
	3541	fi
	3542
	3543
	3544
[1]	3545	# EVENTUELLE OUTPUT-KOMMANDOS ABARBEITEN
	3546	(( i = 0 ))
	3547	while (( i < ioc ))
	3548	do
	3549	(( i = i + 1 ))
	3550	if (( i == 1 ))
	3551	then
	3552	printf "\n\n *** execution of OUTPUT-commands:\n$striche"
	3553	fi
	3554	printf "\n >>> ${out_command[$i]}"
	3555	eval ${out_command[$i]}
	3556	if (( i == ioc ))
	3557	then
	3558	printf "\n$striche\n"
	3559	fi
	3560	done
	3561
	3562
	3563	# EVTL. INHALT DES AKTUELLEN VERZEICHNISSES AUSGEBEN
	3564	if [[ $do_trace = true ]]
	3565	then
	3566	printf "\n\n"
	3567	ls -al
	3568	fi
	3569
	3570
	3571
	3572	# OUTPUT-DATEIEN AN IHRE ZIELORTE KOPIEREN
	3573	(( i = 0 ))
	3574	while (( i < iout ))
	3575	do
	3576	(( i = i + 1 ))
	3577	if (( i == 1 ))
	3578	then
	3579	printf "\n\n *** saving OUTPUT-files:\n$striche"
	3580	fi
	3581
	3582	# PRUEFEN, OB EINZELDATEI ODER DATEI PRO PROZESSOR
	3583	files_for_pes=false; filetyp=file
	3584	if [[ "${actionout[$i]}" = pe && -n $numprocs ]]
	3585	then
	3586	files_for_pes=true; filetyp=directory
	3587	actionout[$i]=""
	3588	elif [[ "${actionout[$i]}" = pe && ! -n $numprocs ]]
	3589	then
	3590	actionout[$i]=""
	3591	elif [[ "${actionout[$i]}" = arpe && -n $numprocs ]]
	3592	then
	3593	files_for_pes=true; filetyp=directory
	3594	actionout[$i]="ar"
	3595	elif [[ "${actionout[$i]}" = arpe && ! -n $numprocs ]]
	3596	then
	3597	actionout[$i]="ar"
	3598	elif [[ "${actionout[$i]}" = flpe && -n $numprocs ]]
	3599	then
	3600	files_for_pes=true; filetyp=directory
	3601	actionout[$i]="fl"
	3602	elif [[ "${actionout[$i]}" = flpe && ! -n $numprocs ]]
	3603	then
	3604	actionout[$i]="fl"
	3605	elif [[ "${actionout[$i]}" = trpe && -n $numprocs ]]
	3606	then
	3607	files_for_pes=true; filetyp=directory
	3608	actionout[$i]="tr"
	3609	elif [[ "${actionout[$i]}" = trpe && ! -n $numprocs ]]
	3610	then
	3611	actionout[$i]="tr"
	3612	fi
	3613
	3614	if [[ ! -f ${localout[$i]} && $files_for_pes = false ]]
	3615	then
	3616	printf "\n +++ temporary OUTPUT-file ${localout[$i]} does not exist\n"
[260]	3617	elif [[ ! -d ${localout[$i]} && $files_for_pes = true ]]
[1]	3618	then
	3619	printf "\n +++ temporary OUTPUT-file ${localout[$i]}/.... does not exist\n"
	3620	else
	3621
	3622
	3623	# KOPIEREN PER FTP/SCP (IMMER IM BINAERMODUS, -M: FALLS ZIELKATALOG
	3624	# NICHT VORHANDEN, WIRD VERSUCHT, IHN ANZULEGEN), ABER NUR BEI
	3625	# REMOTE-RECHNUNGEN
	3626	if [[ "${actionout[$i]}" = tr ]]
	3627	then
	3628	if [[ $localhost != $fromhost ]]
	3629	then
	3630	if [[ $files_for_pes = false ]]
	3631	then
	3632	cps=""
	3633	cst=""
	3634	else
	3635	cps=-c
	3636	cst="/"
	3637	fi
[325]	3638	if [[ $localhost = ibmb \|\| $localhost = nech ]]
[1]	3639	then
	3640
	3641	# TRANSFER IN EIGENSTAENDIGEM JOB
	3642	# ZUERST KOPIE DER DATEI INS TEMPORAERE DATENVERZEICHNIS
	3643	[[ ! -d $tmp_data_catalog/TRANSFER ]] && mkdir -p $tmp_data_catalog/TRANSFER
	3644	file_to_transfer=${fname}_${localout[$i]}_to_transfer_$kennung
	3645	if [[ $files_for_pes = false ]]
	3646	then
	3647	ln -f ${localout[$i]} $tmp_data_catalog/TRANSFER/$file_to_transfer
	3648	else
	3649	mkdir $tmp_data_catalog/TRANSFER/$file_to_transfer
	3650	ln ${localout[$i]}/* $tmp_data_catalog/TRANSFER/$file_to_transfer
	3651	fi
	3652
	3653	echo "set -x" > transfer_${localout[$i]}
	3654	echo "cd $tmp_data_catalog/TRANSFER" >> transfer_${localout[$i]}
[82]	3655
	3656	printf "\n >>> OUTPUT: ${localout[$i]}$cst by SCP in seperate job to"
	3657	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}$cst"
	3658	printf "\n or higher cycle\n"
	3659	echo "batch_scp $cps -b -m -u $return_username $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
	3660
[1]	3661	echo "[[ \$? = 0 ]] && rm $file_to_transfer" >> transfer_${localout[$i]}
	3662
	3663	if [[ $localhost = nech ]]
	3664	then
[82]	3665	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 900 transfer_${localout[$i]}
[1]	3666	else
	3667	if [[ "$LOGNAME" = b323013 ]]
	3668	then
[164]	3669	subjob -v -q c1 -X 0 -m 1000 -t 900 -c $job_catalog transfer_${localout[$i]}
[1]	3670	else
[164]	3671	subjob -d -v -q c1 -X 0 -m 1000 -t 900 -c $job_catalog transfer_${localout[$i]}
[1]	3672	fi
	3673	fi
	3674
	3675	else
	3676
	3677	# TRANSFER INNERHALB DIESES JOBS
	3678	transfer_failed=false
[82]	3679	printf "\n >>> OUTPUT: ${localout[$i]}$cst by SCP to"
	3680	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}$cst\n"
	3681	batch_scp $cps -b -m -u $return_username $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
	3682	[[ $? != 0 ]] && transfer_failed=true
[1]	3683
	3684	# BEI FEHLGESCHLAGENEM TRANSFER SICHERUNGSKOPIE AUF
	3685	# LOKALER MASCHINE ANLEGEN
	3686	if [[ $transfer_failed = true ]]
	3687	then
	3688	printf " +++ transfer failed. Trying to save a copy on the local host under:\n"
	3689	printf " ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung\n"
	3690
	3691	# ERSTMAL PRUEFEN, OB VERZEICHNIS EXISTIERT. GEGEBENENFALLS
	3692	# ANLEGEN.
	3693	eval local_catalog=${pathout[$i]}
	3694	if [[ ! -d $local_catalog ]]
	3695	then
	3696	printf " *** local directory does not exist. Trying to create:\n"
	3697	printf " $local_catalog \n"
	3698	mkdir -p $local_catalog
	3699	fi
	3700	eval cp ${localout[$i]} ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung
	3701	transfer_problems=true
	3702	fi
	3703	fi
	3704	else
	3705
	3706	# WERTZUWEISUNG, SO DASS WEITER UNTEN NUR KOPIERT WIRD
	3707	actionout[$i]=""
	3708	fi
	3709	fi
	3710
	3711
	3712	# APPEND PER FTP/SCP (IMMER IM BINAERMODUS, -M: FALLS ZIELKATALOG
	3713	# NICHT VORHANDEN, WIRD VERSUCHT, IHN ANZULEGEN), ABER NUR BEI
	3714	# REMOTE-RECHNUNGEN
	3715	if [[ "${actionout[$i]}" = tra ]]
	3716	then
	3717	if [[ $localhost != $fromhost ]]
	3718	then
	3719	if [[ $localhost = ibmh \|\| $localhost = ibmb \|\| $localhost = nech ]]
	3720	then
	3721
	3722	# TRANSFER IN EIGENSTAENDIGEM JOB
	3723	# ZUERST KOPIE DER DATEI INS TEMPORAERE DATENVERZEICHNIS
	3724	[[ ! -d $tmp_data_catalog/TRANSFER ]] && mkdir -p $tmp_data_catalog/TRANSFER
	3725	file_to_transfer=${fname}_${localout[$i]}_to_transfer_$kennung
	3726	ln -f ${localout[$i]} $tmp_data_catalog/TRANSFER/$file_to_transfer
	3727
	3728	echo "set -x" > transfer_${localout[$i]}
	3729	echo "cd $tmp_data_catalog/TRANSFER" >> transfer_${localout[$i]}
[82]	3730
	3731	printf "\n >>> OUTPUT: ${localout[$i]} append by SCP in seperate job to"
	3732	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}"
	3733	printf "\n or higher cycle\n"
	3734	echo "batch_scp -A -b -m -u $return_username $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
	3735
[1]	3736	echo "[[ \$? = 0 ]] && rm $file_to_transfer" >> transfer_${localout[$i]}
	3737
	3738	if [[ $localhost = nech ]]
	3739	then
[82]	3740	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 900 transfer_${localout[$i]}
[1]	3741	else
	3742	if [[ $LOGNAME = b323013 ]]
	3743	then
[164]	3744	subjob -v -q c1 -X 0 -m 1000 -t 900 -c $job_catalog transfer_${localout[$i]}
[1]	3745	else
[164]	3746	subjob -d -v -q c1 -X 0 -m 1000 -t 900 -c $job_catalog transfer_${localout[$i]}
[1]	3747	fi
	3748	fi
	3749
	3750	else
	3751
	3752	# TRANSFER INNERHALB DIESES JOBS
	3753	transfer_failed=false
[82]	3754	printf "\n >>> OUTPUT: ${localout[$i]} append by SCP to"
	3755	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}\n"
	3756	batch_scp -A -b -m -u $return_username $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
	3757	[[ $? != 0 ]] && transfer_failed=true
[1]	3758
	3759	# BEI FEHLGESCHLAGENEM TRANSFER SICHERUNGSKOPIE AUF
	3760	# LOKALER MASCHINE ANLEGEN
	3761	if [[ $transfer_failed = true ]]
	3762	then
	3763	printf " +++ transfer failed. Trying to save a copy on the local host under:\n"
	3764	printf " ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung\n"
	3765
	3766	# ERSTMAL PRUEFEN, OB VERZEICHNIS EXISTIERT. GEGEBENENFALLS
	3767	# ANLEGEN
	3768	eval local_catalog=${pathout[$i]}
	3769	if [[ ! -d $local_catalog ]]
	3770	then
	3771	printf " *** local directory does not exist. Trying to create:\n"
	3772	printf " $local_catalog \n"
	3773	mkdir -p $local_catalog
	3774	fi
	3775
	3776	eval cp ${localout[$i]} ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung
	3777	transfer_problems=true
	3778	fi
	3779	fi
	3780	else
	3781
	3782	# WERTZUWEISUNG, SO DASS WEITER UNTEN NUR APPEND AUF
	3783	# LOKALER MASCHINE DURCHGEFUEHRT WIRD
	3784	actionout[$i]=a
	3785	fi
	3786	fi
	3787
	3788
	3789	# OUTPUT-DATEI FUER EINEN FORTSETZUNGSLAUF. DATEI WIRD PER
	3790	# LINK AUF DEN TEMPORAEREN DATENKATALOG GELEGT. OPTION -f WIRD
	3791	# VERWENDET, FALLS DORT NOCH EINE DATEI GLEICHEN NAMENS VORHANDEN
	3792	# SEIN SOLLTE. ANSCHLIESSEND WIRD SEINE ARCHIVIERUNG ANGESTOSSEN
	3793	if [[ "${actionout[$i]}" = fl ]]
	3794	then
	3795	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
	3796	chmod g+rx $tmp_data_catalog
	3797	if [[ $files_for_pes = false ]]
	3798	then
	3799	printf "\n >>> OUTPUT: ${localout[$i]} to"
	3800	printf "\n $tmp_data_catalog/${frelout[$i]} (temporary data catalog)\n"
	3801	ln -f ${localout[$i]} $tmp_data_catalog/${frelout[$i]}
	3802	else
	3803	printf "\n >>> OUTPUT: ${localout[$i]}/.... to"
	3804	printf "\n $tmp_data_catalog/${frelout[$i]} (temporary data catalog)\n"
	3805	mkdir $tmp_data_catalog/${frelout[$i]}
[149]	3806	cd ${localout[$i]}
	3807	for file in $(ls *)
	3808	do
	3809	ln -f $file $tmp_data_catalog/${frelout[$i]}
	3810	done
	3811	cd $TEMPDIR
[1]	3812	fi
	3813
	3814
	3815	# ARCHIVIERUNGSJOB WIRD ERZEUGT UND ABGESCHICKT
	3816	if [[ $store_on_archive_system = true ]]
	3817	then
	3818
	3819	if [[ $archive_system = asterix ]]
	3820	then
	3821	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
	3822	if [[ $files_for_pes = false ]]
	3823	then
	3824	echo "stageout ${frelout[$i]} > STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
	3825	else
	3826	echo "stageout -t ${frelout[$i]} > STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
	3827	fi
	3828	echo "cat STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
	3829	echo "if [[ \$(grep -c \"st.msg:150\" STAGE_OUTPUT${i}_$kennung) != 0 ]]" >> archive_${frelout[$i]}
	3830	echo "then" >> archive_${frelout[$i]}
	3831	echo " do_stageout=false" >> archive_${frelout[$i]}
	3832	echo "else" >> archive_${frelout[$i]}
	3833	echo " echo \" +++ $filetyp ${frelout[$i]} could not be stored on archive-system\" " >> archive_${frelout[$i]}
	3834	echo " cat /dev/null > ~/job_queue/ARCHIVE_ERROR_$fname" >> archive_${frelout[$i]}
	3835	echo " cat STAGE_OUTPUT${i}_$kennung > ~/job_queue/archive_${frelout[$i]}_error" >> archive_${frelout[$i]}
	3836	echo " echo \" *** $filetyp ${frelout[$i]} will be copied to \$WORK as backup\" " >> archive_${frelout[$i]}
	3837	if [[ $files_for_pes = false ]]
	3838	then
	3839	echo " cp ${frelout[$i]} \$WORK" >> archive_${frelout[$i]}
	3840	else
	3841	echo " cp -r ${frelout[$i]} \$WORK/${frelout[$i]}" >> archive_${frelout[$i]}
	3842	fi
	3843	echo " echo \" *** $filetyp ${frelout[$i]} saved\" " >> archive_${frelout[$i]}
	3844	echo "fi" >> archive_${frelout[$i]}
	3845	echo "rm STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
	3846	elif [[ $archive_system = DMF ]]
	3847	then
	3848	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
	3849	if [[ $files_for_pes = false ]]
	3850	then
	3851	printf "\n +++ archiving of single files impossible with $archive_system !\n"
	3852	locat=DMF
	3853	exit
	3854	else
	3855	# FUER RECHNER IN JUELICH. DORT KOENNTEN AUCH
	3856	# EINZELNE DATEIEN GESICHERT WERDEN (SPAETER KORR.)
	3857	echo "rm -rf \$ARCHIVE/${frelout[$i]}" >> archive_${frelout[$i]}
	3858	echo "cp -r ${frelout[$i]} \$ARCHIVE" >> archive_${frelout[$i]}
	3859	fi
	3860	elif [[ $archive_system = tivoli ]]
	3861	then
	3862	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
	3863	if [[ $files_for_pes = false ]]
	3864	then
	3865	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
	3866	echo "set -x" >> archive_${frelout[$i]}
	3867	echo "rm -rf \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
	3868	echo "cp ${frelout[$i]} \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
	3869	else
	3870
	3871	echo "set -x" >> archive_${frelout[$i]}
	3872	echo "rm -rf \$PERM/${frelout[$i]}/*" >> archive_${frelout[$i]}
	3873	echo "[[ ! -d \$PERM/${frelout[$i]} ]] && mkdir $PERM/${frelout[$i]}" >> archive_${frelout[$i]}
	3874	cd $tmp_data_catalog
	3875	all_files=`ls -1 ${frelout[$i]}/*`
	3876	cd - > /dev/null
	3877	(( inode = 0 ))
	3878	(( tp1 = tasks_per_node + 1 ))
	3879	while (( inode < nodes ))
	3880	do
	3881	# echo "*** all_files = \"$all_files\" "
	3882	files=`echo $all_files \| cut -d" " -f1-$tasks_per_node`
	3883	all_files=`echo $all_files \| cut -d" " -f$tp1-`
	3884	# echo "*** tasks_per_node = \"$tasks_per_node\" "
	3885	# echo "*** files = \"$files\" "
	3886	# echo "*** all_files = \"$all_files\" "
[416]	3887	echo "tar cvf \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar $files" >> archive_${frelout[$i]}
	3888	### echo "tar cvf ${frelout[$i]}.node_$inode.tar $files" >> archive_${frelout[$i]}
	3889	### echo "cp ${frelout[$i]}.node_$inode.tar \$PERM/${frelout[$i]}/" >> archive_${frelout[$i]}
	3890	###echo "rm ${frelout[$i]}.node_$inode.tar" >> archive_${frelout[$i]}
[397]	3891	# echo "dsmc incremental \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar" >> archive_${frelout[$i]}
	3892	# echo "dsmmigrate \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar" >> archive_${frelout[$i]}
[1]	3893	(( inode = inode + 1 ))
	3894	done
	3895	# echo "rm -rf \$PERM/${frelout[$i]}.tar" >> archive_${frelout[$i]}
	3896	# echo "tar cvf \$PERM/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
	3897	fi
	3898	elif [[ $archive_system = ut ]]
	3899	then
	3900	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
	3901	if [[ $files_for_pes = false ]]
	3902	then
	3903	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
	3904	echo "set -x" >> archive_${frelout[$i]}
	3905	echo "rm -rf \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
	3906	echo "cp ${frelout[$i]} \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
	3907	else
	3908
	3909	echo "set -x" >> archive_${frelout[$i]}
	3910	echo "rm -rf \$UT/${frelout[$i]}/*" >> archive_${frelout[$i]}
	3911	echo "[[ ! -d \$UT/${frelout[$i]} ]] && mkdir $UT/${frelout[$i]}" >> archive_${frelout[$i]}
	3912	cd $tmp_data_catalog
	3913	all_files=`ls -1 ${frelout[$i]}/*`
	3914	cd - > /dev/null
	3915	(( inode = 0 ))
	3916	(( tp1 = tasks_per_node + 1 ))
	3917	while (( inode < nodes ))
	3918	do
	3919	files=`echo $all_files \| cut -d" " -f1-$tasks_per_node`
	3920	all_files=`echo $all_files \| cut -d" " -f$tp1-`
	3921	echo "tar cvf \$UT/${frelout[$i]}/${frelout[$i]}.node_$inode.tar $files" >> archive_${frelout[$i]}
	3922	(( inode = inode + 1 ))
	3923	done
	3924	fi
	3925	elif [[ $archive_system = none ]]
	3926	then
	3927	printf " +++ archiving on $localhost not available!\n"
	3928	fi
	3929
	3930	if [[ $archive_system != none ]]
	3931	then
[399]	3932	if [[ $localhost = lcsgih \|\| $localhost = lcsgib ]]
[1]	3933	then
[164]	3934	# subjob -d -v -q cdata -X 0 -m 1000 -t 43200 -c $job_catalog archive_${frelout[$i]}
[416]	3935	subjob -v -q permq -X 1 -T 1 -m 1000 -t 172800 -c $job_catalog archive_${frelout[$i]}
[1]	3936	elif [[ $localhost = nech ]]
	3937	then
[82]	3938	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 7200 archive_${frelout[$i]}
[1]	3939	fi
	3940	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
	3941	fi
	3942	else
[399]	3943	printf " +++ caution: option -A is switched off. No archiving on $archive_system!\n"
[1]	3944	fi
	3945
	3946
	3947	# LEERDATEI IM BENUTZERVERZEICHNIS ANLEGEN, DAMIT BEKANNT IST,
	3948	# WIE DIE HOECHSTE ZYKLUSNUMMER AUF DEM ARCHIV-SYSTEM LAUTET
	3949	if [[ $files_for_pes = false ]]
	3950	then
	3951	cat /dev/null > ${pathout[$i]}
	3952	else
	3953	mkdir -p ${pathout[$i]}
	3954	fi
	3955
	3956	fi
	3957
	3958
	3959	# KOPIEREN AUF LOKALER MASCHINE ZUM ARCHIV-SYSTEM
	3960	# AUSSERDEM MUSS LEERDATEI ANGELEGT WERDEN, DAMIT BEKANNT IST,
	3961	# WIE DIE HOECHSTE ZYKLUSNUMMER AUF DEM ARCHIV-SYSTEM LAUTET
	3962	# FALLS IRGENDEINE (VON MEHREREN) ARCHIVIERUNGEN SCHIEF GEHT,
	3963	# WIRD FLAG GESETZT UND BLEIBT AUCH BEI WEITEREN ORDNUNGS-
	3964	# GEMAESSEN ARCHIVIERUNGEN GESETZT
	3965	if [[ "${actionout[$i]}" = ar ]]
	3966	then
	3967	if [[ $files_for_pes = false ]]
	3968	then
	3969	printf "\n >>> OUTPUT: ${localout[$i]} to"
	3970	printf "\n ${pathout[$i]}"
	3971	printf "\n File will be copied to archive-system ($archive_system) !\n"
	3972	else
	3973	printf "\n >>> OUTPUT: ${localout[$i]}/_.... to"
	3974	printf "\n ${pathout[$i]}"
	3975	printf "\n Directory will be copied to archive-system ($archive_system) !\n"
	3976	fi
	3977	mv ${localout[$i]} ${frelout[$i]}
	3978
	3979	file_saved=false
	3980
	3981	if [[ $archive_system = asterix ]]
	3982	then
	3983	do_stageout=true
	3984	(( stageout_anz = 0 ))
	3985	while [[ $do_stageout = true ]]
	3986	do
	3987	if [[ $files_for_pes = false ]]
	3988	then
	3989	stageout ${frelout[$i]} > STAGE_OUTPUT
	3990	else
	3991	stageout -t ${frelout[$i]} > STAGE_OUTPUT
	3992	fi
	3993	cat STAGE_OUTPUT
	3994	if [[ $(grep -c "st.msg:150" STAGE_OUTPUT) != 0 ]]
	3995	then
	3996	file_saved=true
	3997	do_stageout=false
	3998	else
	3999	if [[ $files_for_pes = false ]]
	4000	then
	4001	printf "\n +++ file ${frelout[$i]} could not be saved on archive-system"
	4002	else
	4003	printf "\n +++ directory ${frelout[$i]} could not be saved on archive-system"
	4004	fi
	4005	(( stageout_anz = stageout_anz + 1 ))
	4006	if (( stageout_anz == 10 ))
	4007	then
	4008	printf "\n +++ stoped after 10 unsuccessful tries!"
	4009	archive_save=false
	4010	do_stageout=false
	4011	else
	4012	printf "\n *** new try to store on archive after 15 min:"
	4013	sleep 900
	4014	fi
	4015	fi
	4016	done
	4017	elif [[ $archive_system = DMF ]]
	4018	then
	4019	if [[ $files_for_pes = false ]]
	4020	then
	4021	printf "\n +++ archiving of single files impossible on $archive_system!\n"
	4022	locat=DMF
	4023	exit
	4024	else
	4025	rm -rf $ARCHIVE/${frelout[$i]}
	4026	cp -r ${frelout[$i]} $ARCHIVE
	4027	fi
	4028	file_saved=true
	4029	elif [[ $archive_system = tivoli ]]
	4030	then
	4031	# ARCHIVIERUNG NUR PER BATCH-JOB MOEGLICH
	4032	# DATEI MUSS ZWISCHENZEITLICH INS TEMPORAERE DATENVERZEICHNIS
	4033	# GELEGT WERDEN
	4034	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
	4035	chmod g+rx $tmp_data_catalog
	4036	if [[ $files_for_pes = false ]]
	4037	then
	4038	ln -f ${frelout[$i]} $tmp_data_catalog/${frelout[$i]}
	4039	else
	4040	mkdir $tmp_data_catalog/${frelout[$i]}
	4041	ln -f ${frelout[$i]}/* $tmp_data_catalog/${frelout[$i]}
	4042	fi
	4043
	4044	# BATCH JOB GENERIEREN UND ABSCHICKEN; DATEI MUSS WIEDER
	4045	# AUS TEMPORAEREM DATENVERZEICHNIS ENTFERNT WERDEN
	4046	echo "cd $tmp_data_catalog" > archive_${frelout[$i]}
	4047	if [[ $files_for_pes = false ]]
	4048	then
	4049	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
	4050	echo "rm -rf \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
	4051	echo "cp ${frelout[$i]} \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
	4052	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
	4053	else
	4054	echo "rm -rf \$PERM/${frelout[$i]}.tar" >> archive_${frelout[$i]}
	4055	echo "tar cvf \$PERM/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
	4056	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
	4057	fi
	4058
[164]	4059	subjob -v -d -q cdata -X 0 -m 1000 -t 43200 -c $job_catalog archive_${frelout[$i]}
[1]	4060	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
	4061	file_saved=true
	4062
	4063	elif [[ $archive_system = ut ]]
	4064	then
	4065	# ARCHIVIERUNG NUR PER BATCH-JOB MOEGLICH
	4066	# DATEI MUSS ZWISCHENZEITLICH INS TEMPORAERE DATENVERZEICHNIS
	4067	# GELEGT WERDEN
	4068	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
	4069	chmod g+rx $tmp_data_catalog
	4070	if [[ $files_for_pes = false ]]
	4071	then
	4072	ln -f ${frelout[$i]} $tmp_data_catalog/${frelout[$i]}
	4073	else
	4074	mkdir $tmp_data_catalog/${frelout[$i]}
	4075	ln -f ${frelout[$i]}/* $tmp_data_catalog/${frelout[$i]}
	4076	fi
	4077
	4078	# BATCH JOB GENERIEREN UND ABSCHICKEN; DATEI MUSS WIEDER
	4079	# AUS TEMPORAEREM DATENVERZEICHNIS ENTFERNT WERDEN
	4080	echo "cd $tmp_data_catalog" > archive_${frelout[$i]}
	4081	if [[ $files_for_pes = false ]]
	4082	then
	4083	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
	4084	echo "rm -rf \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
	4085	echo "cp ${frelout[$i]} \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
	4086	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
	4087	else
	4088	echo "rm -rf \$UT/${frelout[$i]}.tar" >> archive_${frelout[$i]}
	4089	echo "tar cvf \$UT/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
	4090	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
	4091	fi
	4092
[82]	4093	subjob -v -c /pf/b/$usern/job_queue -d -q pp -X 0 -m 1000 -t 7200 archive_${frelout[$i]}
[1]	4094	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
	4095	file_saved=true
	4096
	4097	else
	4098	printf "\n +++ archive_system=\"$archive_system\" archiving impossible!"
	4099	archive_save=false
	4100	fi
	4101	if [[ $file_saved = true ]]
	4102	then
	4103	if [[ $files_for_pes = false ]]
	4104	then
	4105	cat /dev/null > ${pathout[$i]}
	4106	else
	4107	mkdir -p ${pathout[$i]}
	4108	fi
	4109	fi
	4110	fi
	4111
	4112	# APPEND AUF LOKALER MASCHINE
	4113	if [[ "${actionout[$i]}" = "a" ]]
	4114	then
	4115	printf "\n >>> OUTPUT: ${localout[$i]} append to ${pathout[$i]}\n"
	4116	cat ${localout[$i]} >> ${pathout[$i]}
	4117	fi
	4118
	4119	# KOPIEREN AUF LOKALER MASCHINE
	4120	# ES MUSS KOPIERT WERDEN, DA MOVE NICHT UEBER FILESYSTEM HINAUS MOEGLICH
	4121	if [[ "${actionout[$i]}" = "" && $files_for_pes = false ]]
	4122	then
	4123
	4124	# KOPIEREN AUF EINPROZESSORMASCHINE
[5]	4125	if [[ "${extout[$i]}" != " " && "${extout[$i]}" != "" ]]
[1]	4126	then
	4127	printf "\n >>> OUTPUT: ${localout[$i]} to ${pathout[$i]}.${extout[$i]}\n"
[149]	4128	if [[ $link_local_output = true ]]
	4129	then
	4130	printf " using ln -f\n"
	4131	ln -f ${localout[$i]} ${pathout[$i]}.${extout[$i]}
	4132	fi
	4133	# If "ln -f" fails of if "$link_local_output = false" do a normal "cp"
	4134	if [[ ! -f "${pathout[$i]}.${extout[$i]}" ]]
	4135	then
	4136	if [[ $link_local_output = true ]]
	4137	then
	4138	printf " ln failed, using cp...\n"
	4139	fi
	4140	cp ${localout[$i]} ${pathout[$i]}.${extout[$i]}
	4141	fi
[1]	4142	else
	4143	printf "\n >>> OUTPUT: ${localout[$i]} to ${pathout[$i]}\n"
[149]	4144	if [[ $link_local_output = true ]]
	4145	then
	4146	printf " using ln -f\n"
	4147	ln -f ${localout[$i]} ${pathout[$i]}
	4148	fi
	4149	# If "ln -f" fails of if "$link_local_output = false" do a normal "cp"
	4150	if [[ ! -f "${pathout[$i]}" ]]
	4151	then
	4152	if [[ $link_local_output = true ]]
	4153	then
	4154	printf " ln failed, using cp...\n"
	4155	fi
	4156	cp ${localout[$i]} ${pathout[$i]}
	4157	fi
[1]	4158	fi
	4159
	4160	elif [[ "${actionout[$i]}" = "" && $files_for_pes = true ]]
	4161	then
	4162
	4163	# DIE DEN PROZESSOREN EINES PARALLELRECHNERS ZUGEHOERIGEN
	4164	# DATEIEN WERDEN ERST IN EINEM KATALOG GESAMMELT UND DIESER
	4165	# WIRD DANN KOPIERT
	4166	# PER MOVE UMBENANNT WERDEN
	4167	printf "\n >>> OUTPUT: ${localout[$i]}/_.... to ${pathout[$i]}\n"
[149]	4168	if [[ $link_local_output = true ]]
	4169	then
	4170	printf " using ln -f\n"
	4171	mkdir ${pathout[$i]}
	4172	cd ${localout[$i]}
	4173	for file in $(ls *)
	4174	do
	4175	ln -f $file ${pathout[$i]}
	4176	done
	4177	cd $TEMPDIR
	4178	fi
	4179	# If "ln -f" fails of if "$link_local_output = false" do a normal "cp -r"
	4180	if [[ ! -f "${pathout[$i]}/_0000" ]]
	4181	then
	4182	if [[ $link_local_output = true ]]
	4183	then
	4184	printf " ln failed for .../_0000, using cp...\n"
	4185	fi
	4186	cp -r ${localout[$i]} ${pathout[$i]}
	4187	fi
[1]	4188
	4189	fi
	4190	fi
	4191	done
	4192	if (( i != 0 ))
	4193	then
	4194	if [[ $transfer_problems = true ]]
	4195	then
	4196	printf "\n$striche\n *** OUTPUT-files saved"
	4197	printf "\n +++ WARNING: some data transfers failed! \n"
	4198	else
	4199	printf "\n$striche\n *** all OUTPUT-files saved \n"
	4200	fi
	4201	fi
	4202
	4203
	4204	# EVENTUELL FOLGEJOB STARTEN
	4205	# DATEI CONTINUE_RUN MUSS VOM BENUTZERPROGRAMM AUS ERZEUGT WERDEN
	4206	if [[ -f CONTINUE_RUN ]]
	4207	then
	4208
	4209	if [[ $archive_save = true ]]
	4210	then
	4211
	4212	# ZUERST IN MRUN-AUFRUF OPTIONEN FUER FORTSETZUNGSLAUF, FUER
	4213	# STILLES ABARBEITEN (OHNE INTERAKTIVE RUECKFAGEN) UND FUER
	4214	# BATCH-BETRIEB (NUR WICHTIG, FALLS BATCH AUF LOKALER MASCHINE
	4215	# DURCHGEFUEHRT WERDEN SOLL) EINFUEGEN, FALLS NICHT BEREITS VOR-
	4216	# HANDEN
	4217	[[ $(echo $mc \| grep -c "\-C") = 0 ]] && mc="$mc -C"
	4218	[[ $(echo $mc \| grep -c "\-v") = 0 ]] && mc="$mc -v"
	4219	[[ $(echo $mc \| grep -c "\-b") = 0 ]] && mc="$mc -b"
	4220	if [[ $(echo $mc \| grep -c "#") != 0 ]]
	4221	then
	4222	mc=`echo $mc \| sed 's/#/f/g'`
	4223	fi
	4224
	4225
	4226	# JOB STARTEN
	4227	printf "\n\n *** initiating restart-run on \"$return_addres\" using command:\n"
	4228	echo " $mc"
	4229	printf "\n$striche\n"
	4230	if [[ $localhost != $fromhost ]]
	4231	then
	4232
[204]	4233	if [[ $localhost = lcsgih \|\| $localhost = lcsgib \|\| $localhost = nech \|\| $localhost = ibmb \|\| $localhost = ibmh \|\| $localhost = ibms \|\| $localhost = lctit ]]
[1]	4234	then
	4235	echo "*** ssh will be used to initiate restart-runs!"
	4236	echo " return_addres=\"$return_addres\" "
	4237	echo " return_username=\"$return_username\" "
	4238	if [[ $return_addres = 172.20.25.41 ]]
	4239	then
	4240	# WORKAROUND AUF SCIROCCO AM TIT
[374]	4241	print "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc " \| ssh $return_addres -l $return_username
	4242	elif [[ $(echo $return_addres \| grep -c "130.75.105") = 1 ]]
	4243	then
	4244	ssh $return_addres -l $return_username "PATH=\$PATH:$LOCAL_MRUN_PATH;export LD_LIBRARY_PATH=\$LD_LIBRARY_PATH:/muksoft/packages/intel/Compiler/11.0/083/lib/intel64/;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc "
[1]	4245	else
[33]	4246	ssh $return_addres -l $return_username "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc "
[1]	4247	fi
	4248	else
	4249	printf "\n +++ no restart mechanism available for host \"$localhost\" "
	4250	locat=restart; exit
	4251	fi
	4252
	4253	# WARTEN, DAMIT SICH RESTART JOB IN QUEUE EINREIHEN KANN, BEVOR
	4254	# DER AKTUELLE JOB ENDET
[399]	4255	if [[ $queue = special1q ]]
	4256	then
	4257	sleep 120
	4258	else
	4259	sleep 30
	4260	fi
[1]	4261
	4262	else
	4263
	4264	# BEI RECHNUNGEN AUF LOKALER MASCHINE KANN MRUN DIREKT AUFGE-
[108]	4265	# RUFEN WERDEN, AUSSER AUF lcfimm
[1]	4266	cd $LOCAL_PWD
[108]	4267	if [[ $localhost = lcfimm ]]
	4268	then
	4269	ssh $return_addres -l $return_username "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc "
	4270	else
	4271	eval $mc # ' MUESSEN AUSGEWERTET WERDEN
	4272	fi
[1]	4273	cd - > /dev/null
	4274	fi
	4275	printf "\n$striche\n *** restart-run initiated \n"
	4276
	4277
	4278	# EVENTUELL INPUT-DATEIEN, DIE VON TEMPORAEREM DATENVERZEICHNIS
	4279	# GEHOLT WORDEN SIND, LOESCHEN
	4280	(( i = 0 ))
	4281	while (( i < iin ))
	4282	do
	4283	(( i = i + 1 ))
	4284	if [[ "${got_tmp[$i]}" = true && $keep_data_from_previous_run = false ]]
	4285	then
	4286	rm -r $tmp_data_catalog/${frelin[$i]}
	4287	fi
	4288	done
	4289
	4290	else
	4291
	4292	printf "\n +++ no restart-run possible, since errors occured"
	4293	printf "\n during the archive process"
	4294	fi
	4295
	4296	fi
	4297
	4298
	4299
	4300	# EVTL. EMAIL-BENACHRICHTIGUNG UEBER ABGESCHLOSSENEN LAUF
[352]	4301	if [[ "$email_notification" != "none" ]]
[1]	4302	then
	4303
	4304	if [[ $localhost != $fromhost ]]
	4305	then
	4306	if [[ -f CONTINUE_RUN ]]
	4307	then
	4308	echo "PALM restart run necessary" > email_text
	4309	echo "description header of actual run:" >> email_text
	4310	cat CONTINUE_RUN >> email_text
	4311	echo "mrun-command to restart:" >> email_text
	4312	echo "$mc" >> email_text
	4313	else
	4314	echo "PALM run with base filename \"$fname\" on host \"$localhost\" finished" > email_text
	4315	fi
	4316	mail $email_notification < email_text
	4317	printf "\n *** email notification sent to \"$email_notification\" "
	4318	fi
	4319	fi
	4320
	4321
	4322
	4323	# ALLE ARBEITEN BEENDET. TEMPORAERER KATALOG KANN GELOESCHT WERDEN
	4324	cd $HOME
	4325	[[ $delete_temporary_catalog = true ]] && rm -rf $TEMPDIR
	4326
	4327	else
	4328
	4329
	4330	# FALLS AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL, WERDEN JETZT ENTSPRE-
	4331	# CHENDE AKTIONEN DURCHGEFUEHRT
	4332
	4333	# MRUN-BEFEHL FUER REMOTE-MASCHINE ZUSAMMENSTELLEN
[82]	4334	mrun_com="$mrun_script_name -a $afname -c $config_file -d $fname -h $host -H $fromhost -m $memory -t $cpumax -q $queue -R $return_addres -U $return_username -u $remote_username"
[1]	4335	[[ "$cpp_opts" != "" ]] && mrun_com=${mrun_com}" -D \"$cpp_opts\""
[79]	4336	[[ "$global_revision" != "" ]] && mrun_com=${mrun_com}" -G \"$global_revision\""
[123]	4337	[[ $group_number != none ]] && mrun_com=${mrun_com}" -g $group_number"
[1]	4338	[[ $do_compile = true ]] && mrun_com=${mrun_com}" -s \"$source_list\""
	4339	[[ "$input_list" != "" ]] && mrun_com=${mrun_com}" -i \"$input_list\""
	4340	[[ $ignore_archive_error = true ]] && mrun_com=${mrun_com}" -I"
	4341	[[ $keep_data_from_previous_run = true ]] && mrun_com=${mrun_com}" -k"
	4342	[[ "$additional_conditions" != "" ]] && mrun_com=${mrun_com}" -K \"$additional_conditions\""
	4343	# [[ "$makefile" != "$source_path/Makefile" ]] && mrun_com=${mrun_com}" -M \"$makefile\""
	4344	[[ "$output_list" != "" ]] && mrun_com=${mrun_com}" -o \"$output_list\""
	4345	[[ "$read_from_config" = false ]] && mrun_com=${mrun_com}" -S"
	4346	[[ $do_trace = true ]] && mrun_com=${mrun_com}" -x"
	4347	[[ "$numprocs" != "" ]] && mrun_com=${mrun_com}" -X $numprocs"
	4348	if [[ $use_openmp = true ]]
	4349	then
	4350	mrun_com=${mrun_com}" -O"
	4351	[[ "$tasks_per_node" != "" ]] && mrun_com=${mrun_com}" -T $threads_per_task"
	4352	else
	4353	[[ "$tasks_per_node" != "" ]] && mrun_com=${mrun_com}" -T $tasks_per_node"
	4354	fi
[397]	4355	[[ $store_on_archive_system = true ]] && mrun_com=${mrun_com}" -A"
[1]	4356	[[ $package_list != "" ]] && mrun_com=${mrun_com}" -p \"$package_list\""
	4357	[[ $return_password != "" ]] && mrun_com=${mrun_com}" -P $return_password"
	4358	[[ $delete_temporary_catalog = false ]] && mrun_com=${mrun_com}" -B"
[127]	4359	[[ $node_usage != default && "$(echo $node_usage \| cut -c1-3)" != "sla" && $node_usage != novice ]] && mrun_com=${mrun_com}" -n $node_usage"
[291]	4360	[[ "$ocean_file_appendix" = true ]] && mrun_com=${mrun_com}" -y"
[206]	4361	[[ $run_coupled_model = true ]] && mrun_com=${mrun_com}" -Y \"$coupled_dist\""
[1]	4362	if [[ $do_remote = true ]]
	4363	then
	4364	printf "\n>>>> MRUN-command on execution host:\n>>>> $mrun_com \n"
	4365	fi
	4366
	4367
	4368	# ZUSAMMENSTELLUNG DES JOBSCRIPTS AUF DATEI jobfile
	4369	jobfile=jobfile.$RANDOM
	4370
	4371
	4372	# TEMPORAERES VERZEICHNIS GENERIEREN UND NACH DORT WECHSELN
	4373	echo "mkdir $TEMPDIR" >> $jobfile
	4374	echo "cd $TEMPDIR" >> $jobfile
	4375
	4376
	4377	# EVENTUELL FEHLERVERFOLGUNG AKTIVIEREN
	4378	if [[ $do_trace = true ]]
	4379	then
	4380	echo "set -x" >> $jobfile
	4381	else
	4382	echo "set +vx" >> $jobfile
	4383	fi
	4384
	4385
[191]	4386	# BEREITSTELLUNG VON QUELLTEXTEN, MRUN-SCRIPTS UND KONFIGURATIONS-
	4387	# DATEI FUER DEN JOB
	4388	if [[ $( echo $host \| cut -c1-5 ) = lcsgi ]]
[1]	4389	then
	4390
[191]	4391	# KONFIGURATIONSDATEI UND MRUN_SCRIPT IN DAS SOURCE-VERZEICHNIS
	4392	# KOPIEREN
	4393	if [[ $restart_run != true ]]
	4394	then
	4395	cp $config_file $working_directory/SOURCES_FOR_RUN_$fname
	4396	cp ${PALM_BIN}/$mrun_script_name $working_directory/SOURCES_FOR_RUN_$fname
	4397	fi
[1]	4398
[191]	4399	# SOURCE-VERZEICHNIS VOM LOKALEN RECHNER PER SCP TRANSFERIEREN
[193]	4400	echo "set -x" >> $jobfile
	4401	echo "scp -r $return_username@$return_addres:$working_directory/SOURCES_FOR_RUN_$fname ." >> $jobfile
	4402	echo "export SOURCES_COMPLETE=true" >> $jobfile
[1]	4403
[193]	4404	# QUELLTEXTE, MRUN-SCRIPT UND KONFIGURATIONSDATEI IN DAS AKTUELLE
	4405	# ARBEITSVERZEICHNIS VERSCHIEBEN
	4406	echo "mv SOURCES_FOR_RUN_$fname/$config_file . " >> $jobfile
	4407	echo "mv SOURCES_FOR_RUN_$fname/$mrun_script_name . " >> $jobfile
	4408	echo "execute_mrun=true" >> $jobfile
	4409	echo " " >> $jobfile
	4410
[191]	4411	else
	4412
	4413	# ABSPEICHERN DER QUELLTEXTE (NUR FALLS UEBERSETZT WERDEN SOLL)
	4414	# SOWIE GEGEBENENFALLS DES MAKEFILES
	4415	if [[ $do_compile = true ]]
	4416	then
	4417
	4418	source_catalog=SOURCES_FOR_RUN_$fname
	4419
	4420	# UNTERVERZEICHNIS FUER QUELLTEXTE UND MAKEFILE ANLEGEN
	4421	# MRUN WIRD DIESES VRZEICHNIS UEBER ENVIRONMENT VARIABLE
	4422	# MITGETEILT (UEBERSTEUERT ANGABE IN KONFIGURATIONSDATEI)
	4423	echo "mkdir SOURCES_FOR_RUN_$fname" >> $jobfile
	4424	echo "export SOURCES_COMPLETE=true" >> $jobfile
	4425	echo "cd SOURCES_FOR_RUN_$fname" >> $jobfile
	4426
	4427	for filename in $source_list
	4428	do
	4429	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
	4430	echo "cat > $filename << \"%END%\"" >> $jobfile
	4431	cat $source_catalog/$filename >> $jobfile
	4432	echo " " >> $jobfile
	4433	echo "%END%" >> $jobfile
	4434	echo " " >> $jobfile
	4435	done
	4436
[1]	4437	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
[191]	4438	echo "cat > Makefile << \"%END%\"" >> $jobfile
	4439	cat $source_catalog/Makefile >> $jobfile
[1]	4440	echo " " >> $jobfile
	4441	echo "%END%" >> $jobfile
	4442	echo " " >> $jobfile
	4443
[191]	4444	echo "cd - > /dev/null" >> $jobfile
[1]	4445
[191]	4446	fi
[1]	4447
	4448
[191]	4449	# ABSPEICHERN DER KONFIGURATIONSDATEI
	4450	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
	4451	echo "cat > $config_file << \"%END%\"" >> $jobfile
	4452	cat $config_file >> $jobfile
	4453	echo "%END%" >> $jobfile
	4454	echo " " >> $jobfile
[1]	4455
	4456
[191]	4457	# ABSPEICHERN DER AKTUELLEN MRUN-VERSION
	4458	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
	4459	echo "cat > $mrun_script_name <<\"%END%\"" >> $jobfile
	4460	cat ${PALM_BIN}/$mrun_script_name >> $jobfile
	4461	echo "%END%" >> $jobfile
	4462	if [[ $host = lctit ]]
	4463	then
	4464	echo "sed 's/bin\/ksh/home2\/usr5\/mkanda\/pub\/ksh/' < $mrun_script_name > mrun_new" >> $jobfile
	4465	echo "mv mrun_new $mrun_script_name" >> $jobfile
	4466	fi
	4467	echo "chmod u+x $mrun_script_name" >> $jobfile
	4468	echo "execute_mrun=true" >> $jobfile
	4469	echo " " >> $jobfile
[1]	4470
	4471	fi
	4472
[191]	4473
[1]	4474	# EVTL. BENOETIGTE INPUT-DATEIEN PER FTP HOLEN ODER DEM JOB DIREKT
	4475	# MITGEBEN UND AUF DEM REMOTE-RECHNER IM BENUTZERVERZEICHNIS ABLEGEN
	4476	# FALLS DIESES NICHT EXISTIERT, WIRD VERSUCHT, DAS JEWEILS LETZTE
	4477	# UNTERVERZEICHNIS DES PFADNAMENS ANZULEGEN
	4478	if [[ $do_remote = true ]]
	4479	then
	4480	(( i = 0 ))
	4481	while (( i < iin ))
	4482	do
	4483	(( i = i + 1 ))
	4484	echo "[[ ! -d ${pathin[$i]} ]] && mkdir -p ${pathin[$i]}" >> $jobfile
	4485	if [[ "${transin[$i]}" = job ]]
	4486	then
	4487	echo "cat > ${remotepathin[$i]} <<\"%END%\"" >> $jobfile
	4488	eval cat ${pathin[$i]}/${frelin[$i]} >> $jobfile
	4489	echo " " >> $jobfile
	4490	echo "%END%" >> $jobfile
	4491	else
[82]	4492	echo "batch_scp -b -o -g -s -u $return_username $return_addres ${remotepathin[$i]} \"${pathin[$i]}\" ${frelin[$i]}" >> $jobfile
[1]	4493	fi
	4494
	4495	# UEBERPRUEFEN, OB DATEI ANGELEGT WERDEN KONNTE
	4496	echo "if [[ \$? = 1 ]]" >> $jobfile
	4497	echo "then" >> $jobfile
	4498	echo " echo \" \" " >> $jobfile
	4499	echo " echo \"+++ file ${remotepathin[$i]} could not be created\" " >> $jobfile
	4500	echo " echo \" please check, if directory exists on $host!\" " >> $jobfile
	4501	echo " echo \"+++ MRUN will not be continued\" " >> $jobfile
	4502	echo " execute_mrun=false" >> $jobfile
	4503	echo "fi" >> $jobfile
	4504	done
	4505	fi
	4506
	4507	# ARBEITSKATALOG AUF DER LOKALEN MASCHINE FUER EVENTUELLE
	4508	# FORTSETZUNGSLAUEFE PER ENV-VARIABLE UEBERGEBEN
	4509	echo "LOCAL_PWD=$working_directory" >> $jobfile
	4510	echo "export LOCAL_PWD" >> $jobfile
	4511
	4512	# EBENSO LOKALEN MRUN-KATALOG UEBERGEBEN
[22]	4513	echo "LOCAL_MRUN_PATH=$PALM_BIN" >> $jobfile
[1]	4514	echo "export LOCAL_MRUN_PATH" >> $jobfile
	4515
[66]	4516	# WORKAROUND FUER RIAM-NEC-JOBS WEGEN PROFILE-SCHWIERIGKEITEN
[69]	4517	if [[ $localhost_realname = "gate" \|\| $localhost = lctit ]]
[66]	4518	then
	4519	echo "export PALM_BIN=$PALM_BIN" >> $jobfile
	4520	fi
[1]	4521
	4522	# MRUN AUF ZIELRECHNER AUFRUFEN
	4523	echo "set -x" >> $jobfile
	4524	echo "[[ \$execute_mrun = true ]] && ./$mrun_com" >> $jobfile
	4525
	4526	echo 'ls -al; echo `pwd`' >> $jobfile
	4527	echo "cd \$HOME" >> $jobfile
	4528	echo "rm -rf $TEMPDIR" >> $jobfile
	4529
	4530
	4531
	4532
	4533	# JOB PER SUBJOB STARTEN
	4534	if [[ $silent = false ]]
	4535	then
	4536	printf "\n "
	4537	else
	4538	printf "\n\n"
	4539	fi
	4540
[352]	4541	subjob $job_on_file -h $host -u $remote_username -g $group_number -q $queue -m $memory -N $node_usage -t $cpumax $XOPT $TOPT $OOPT -n $fname -v -c $job_catalog -e $email_notification $jobfile
[1]	4542	rm -rf $jobfile
	4543
	4544
	4545	fi # ENDE REMOTE-TEIL
	4546
	4547
	4548
	4549	# ENDE DER PROZEDUR

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