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source: palm/trunk/SCRIPTS/mrun @ 251

Last change on this file since 251 was 251, checked in by raasch, 16 years ago
updates for using RIAMs NEC-SX9
Property svn:keywords set to `Id Rev`
File size: 157.2 KB

Rev	Line
[71]	1	#!/bin/ksh
[66]	2	# mrun - Plot-Shellskript
[169]	3	# $Id: mrun 251 2009-03-03 02:31:06Z raasch $
[1]	4
	5	# Prozedur zum Starten von Modellaeufen
	6
	7	# letzte Aenderung:
	8	# 03/03/94 - Siggi - Entwicklungsbeginn
	9	# 21/03/94 - Siggi - Entwicklungsabschluss (Version 1.0)
	10	# 09/12/94 - Siggi - allexport unterbunden; statt dessen werden jetzt ein-
	11	# zelne Variable exportiert. Dies ist noetig, weil an-
	12	# sonsten irgendein Speicher ueberlaeuft und von mrun
	13	# aufgerufene Programme (z.B. stageout) mit Fehlern
	14	# abbrechen (too many arguments)
	15	# 20/06/95 - Siggi - noclobber muss explizit abgeschaltet, da jetzt
	16	# defaultmaessig im RRZN-Profile eingeschaltet
	17	# 10/06/97 - Siggi - Zusaetzliche Option -C bei cpp, damit // nicht
	18	# wegfallen
	19	# 25/04/00 - Siggi - Version 1.5
	20	# remote_addres und remote_user in return_addres bzw.
	21	# return_username umbenannt, return_username wird dem
	22	# mrun-Aufruf im Job ueber Option -U mitgegeben.
	23	# Neue Variable remote_username, die beim interaktiven
	24	# mrun-Aufruf zwingend ueber die neue Option -u oder
	25	# in der Konfigurationsdatei angegeben werden muss.
	26	# 08/02/01 - Siggi - Alle mrun-Meldungen ins englische uebersetzt,
	27	# Version 1.7
	28	# 05/05/02 - Siggi - Uebersetzungen mittels make-Mechanismus moeglich
	29	# 21/11/02 - Siggi - ENV-Variable XLFRTEOPTS wird vor Ausfuehrung auf
	30	# IBM gesetzt, um Record-Laenge der NAMELIST-Dateien,
	31	# zu bestimmen; Praeprozessoroptionen haben nun alle
	32	# die Form -Dtext=text, weil auf IBM sonst text durch
	33	# die leere Zeichenkette ersetzt wird
	34	# 01/08/03 - Siggi - Test of implementing dvrp+1PE on ibm
	35	# 07/01/04 - Siggi - additional preprocessor directive for ibm included
	36	# (-D$OMP=OMP) in order to avoid problems with
	37	# OMP_NUM_THREADS
	38	# 04/01/05 - Siggi - archiving on hanni and berni is done in separate
	39	# tar files, one for each node used
	40	# 07/01/04 - Siggi - old code for t3e, vpp and hpcs eliminated
	41	# 09/01/05 - Siggi - workaround for getting the IP address on gfdl3
	42	# 17/01/05 - Siggi - job for data transfer to local machine now within
	43	# job class c1 (HLRN)
	44	# 27/01/05 - Siggi - IP address workaround for gfdl3 removed
	45	# 28/01/05 - Siggi - tar-filenames on $PERM (HLRN) now include the
	46	# base filename and cycle number
	47	# 16/02/05 - Gerald - hababai validated
	48	# 14/03/05 - Siggi - abort on NEC after first runtime error (F_ERRCNT)
	49	# 29/03/05 - Marcus - berni*-en0 validated
	50	# 21/04/05 - Siggi - transfer-job-protocol for avs-data is no more stored
	51	# 24/04/05 - Siggi - netcdf support on lcmuk
	52	# 25/04/05 - Siggi - netcdf support on gfld3 (decalpha)
	53	# 11/05/05 - Siggi - files with non-numeric extensions (.xxx after cycle
	54	# number) can now be used within interactive runs
	55	# 12/05/05 - Siggi - netcdf support on ibm
	56	# 13/05/05 - Siggi - error in tar-filenames on $PERM (HLRN) removed
	57	# 18/05/05 - Siggi - netcdf support on nec
	58	# 24/05/05 - Siggi - netcdf support on ibms
	59	# 14/06/05 - Siggi - sleep interval after submit of restart job increased
	60	# to 30 seconds
	61	# 28/06/05 - Siggi - bora adjusted to new intel compiler (LD_LIBRARY_
	62	# PATH is temporarily set)
	63	# 07/09/05 - Siggi - setting of MP_EAGER_LIMIT switched off because it
	64	# caused warnings in the job protocol
	65	# 20/10/05 - Siggi - update of netcdf-version on decalpha (gfdl3)
	66	# 25/10/05 - Siggi - error in listing files for getting the cycle number
	67	# removed
	68	# 26/10/05 - Siggi - new paths for dvrp-library, transfer of catalogs
	69	# realized by file attribute trpe
	70	# 28/10/05 - Siggi - if existing, the file extension is output in case
	71	# of missing input file - no job abort in case of
	72	# missing input files with file extensions
	73	# (preliminary solution)
	74	# 31/10/05 - Siggi - data transfer from nech now within seperate job
	75	# 04/11/05 - Siggi - netcdf 3.6.0-p1 on ibmh/ibmb
	76	# 07/12/05 - Siggi - gallego and elephanta admitted
	77	# 30/12/05 - Siggi - gfdl5 (ibmy) admitted
	78	# 10/01/06 - Siggi - cpp directive for NetCDF 64bit support
	79	# 20/01/06 - Siggi - cpp directive for ibmy
	80	# 09/02/06 - Siggi - ibmy admitted for batch mode
	81	# 13/04/06 - Siggi - ostria admitted
	82	# 18/04/06 - Siggi - usage of OpenMP implemented (additional option -O)
	83	# 10/05/06 - Siggi - environment variable XLSMPOPTS set on IBM for
	84	# optimization of OpenMP runs (option stacksize is
	85	# necessary for large gridpoint numbers because
	86	# otherwise a segmentation fault occurs)
	87	# 23/05/05 - Siggi - lctit (SUN Fire X4600) admitted
	88	# 21/08/06 - Siggi - standard mrun path on scirocco is as on bora
	89	# 23/08/06 - Siggi - netcdf support for scirocco (notebook)
	90	# 20/09/06 - Marcus - add DVRP library on nech
	91	# 24/10/06 - Siggi - Environment variables for PALM steering are written
	92	# on local NAMELIST file ENVPAR
	93	# 24/11/06 - Siggi - levanto admitted, maestro switched to ifc 9.1
	94	# 28/11/06 - Siggi - call to interpret_config.x_levanto because of SuSe 10
	95	# 06/02/07 - Siggi - add DVRP library on lcmuk
	96	# 07/02/07 - Siggi - revision of source code handling, source code is
	97	# now expected in directory given by source_path and
	98	# not in the current working directory, source code
	99	# files provided in add_source_path are allways
	100	# compiled, source code to be compiled is allways
	101	# sampled in SOURCES_FOR_RUN_$fname which is a
	102	# subdirectory of the current working directory,
[5]	103	# -s TEST changed to -s WRITE_PERMIT or -s WP,
[1]	104	# adapted for RIAM (neck)
[5]	105	# bugfix for cycle number of output file (extout)
	106	# all hpmuk-related code removed
[14]	107	# 14/02/07 - Siggi - dvrp support for neck added
[21]	108	# 28/02/07 - Siggi - empty lines in configuration file are accepted
[26]	109	# mrun_path replaced by PALM_BIN,
	110	# all machines are calling interpret_config.x
[66]	111	# 14/03/07 - Siggi - fimm admitted, revision number added to terminal
	112	# output
[69]	113	# 16/03/07 - Siggi - adjustments for lctit
[78]	114	# 29/03/07 - Siggi - global revision transfered to batch job by new
	115	# option -G
[82]	116	# 30/03/07 - Siggi - compilation "by hand" removed, cpp-directives/options
	117	# + netcdf/dvrp-options are read from configuration
	118	# file, host identifier (local_host) is read from
	119	# config file, code related to ftp filetransfer
	120	# removed (incl. option -f)
[97]	121	# 19/06/07 - Siggi - time limit for cdata jobs increased
[102]	122	# 25/07/07 - Siggi - two sets of executables can be started on lcmuk,
	123	# if new option -Y (coupling) is given,
	124	# output of executables to aout_output removed,
	125	# messages are immediately written to stdout instead
[108]	126	# 03/08/07 - Marcus - add XOPT="-X $numprocs" for lcfimm
	127	# 09/08/07 - Marcus - workaround on lcfimm to propagate environment
	128	# variables out to the nodes in coupled mode -disabled-
	129	# 13/08/07 - Marcus - start local restart jobs per ssh on lcfimm
[109]	130	# 28/08/07 - Marcus - completely remove workaround on lcfimm to propagate
	131	# environment variables out to the nodes in coupled mode
[118]	132	# 15/10/07 - Siggi - Preliminary adjustments for lctit, based on Jin's
	133	# suggestions
[122]	134	# 19/10/07 - Marcus - further adjustments for lctit: add new optional
	135	# argument -g group_number, admit all sla* node_usage
	136	# queues
[129]	137	# 30/10/07 - Marcus - further adjustments for queues on lctit
[149]	138	# 14/02/08 - Bjoern - link of restart files with long file name possible
	139	# 28/02/08 - Marcus - If environment variable link_local_output is set to
	140	# true, mrun tries "ln -f" on local output and resorts
	141	# to "cp" or "cp -r" on error
[164]	142	# 15/04/08 - Siggi - argument -c introduced to most of the subjob calls,
	143	# which allows the user to choose his own job catalog
	144	# by setting job_catalog in the configuration file
	145	# (default is ~/job_queue),
[172]	146	# workaround for mpiexec with -env option,
[164]	147	# adjustments for lcxt4 (Bergen Center for Computational
	148	# Science)
[183]	149	# 22/05/08 - Marcus - If environment variable link_local_input is set to
	150	# true, mrun tries "ln -f" on local input and resorts
	151	# to "cp" or "cp -r" on error
[180]	152	# 27/05/08 - Siggi - PATH is set to PALM_BIN everywhere (missing so far)
[179]	153	# 14/07/08 - Siggi - adjustments for lcsgih
[188]	154	# 08/08/08 - Marcus - typo removed in lcxt4 branch
[204]	155	# 17/09/08 - Siggi - restart mechanism adjusted for lcsgi
[210]	156	# 02/10/08 - BjornM - argument "-Y" modified, adjustments for coupled runs
	157	# 21/10/08 - Siggi - bugfix for the case that -K has more than one
	158	# argument
[211]	159	# 08/11/08 - Siggi - bugfix for depository path settings in configuration
	160	# file
	161	# 11/11/08 - Siggi - rules for using user code files changed: user
	162	# code splitted into one file per subroutine,
	163	# user can provide his/her own makefile, only
	164	# default source-code filenames are allowed
[215]	165	# 14/11/08 - Siggi - cond1 and cond2 are part of the depository name
[221]	166	# 08/01/09 - Siggi - mpi module on sgi machines to be used can be set
	167	# with environment variable mpilib
[223]	168	# 13/01/09 - Siggi - totalview on hice/bice can be used in debug mode
	169	# using environment variable totalview
[246]	170	# 25/02/09 - Siggi - cputime-option (-t) is allowed to be omitted for
	171	# interactive runs
[251]	172	# 02/03/09 - Siggi - adjustments for new NEC-SX9 at RIAM (necriam)
[211]	173
	174
[1]	175
	176	# VARIABLENVEREINBARUNGEN + DEFAULTWERTE
	177
	178	set +o allexport # SICHERHEITSHALBER UNTERBINDEN, DA SONST EVTL. STAGEOUT
	179	# NICHT LAUEFT (TOO MANY ARGUMENTS - PROBLEM)
	180	set +o noclobber # EXISTIERENDE DATEIEN DUERFEN UEBERSCHRIEBEN WERDEN
	181
	182	AddFilenames=""
	183	additional_conditions=""
	184	add_source_path=""
	185	afname=""
	186	archive_save=true
	187	archive_system=none
	188	compiler_name=""
	189	cond1=""
	190	cond2=""
	191	config_file=.mrun.config
[206]	192	coupled_dist=""
	193	coupled_mode="mpi1"
[1]	194	cpp_opts=""
[82]	195	cpp_options=""
[1]	196	cpumax=0
	197	cpurest=0
	198	delete_temporary_catalog=true
	199	do_batch=false
	200	do_compile=true
	201	do_remote=false
	202	do_stagein=true
	203	do_stageout=true
	204	do_trace=false
	205	email_notification=""
	206	exclude=""
	207	executable=""
	208	execution_error=false
[67]	209	fimm=false
[1]	210	fname=test
	211	fromhost=""
[78]	212	global_revision=""
[122]	213	group_number=none
[1]	214	host=""
	215	host_file=""
	216	hp=""
	217	ignore_archive_error=false
	218	input_list=""
	219	interpreted_config_file=""
[164]	220	job_catalog="~/job_queue"
[1]	221	job_on_file=""
	222	keep_data_from_previous_run=false
[183]	223	link_local_input=false
[149]	224	link_local_output=false
[1]	225	localhost_realname=$(hostname)
	226	local_compile=false
	227	locat=normal
	228	mainprog=""
	229	makefile=""
	230	mc=$0
	231	while [[ $(echo $mc \| grep -c "/") != 0 ]]
	232	do
	233	mc=`echo $mc \| cut -f2- -d"/"`
	234	done
	235	module_files=""
	236	mrun_script_name=$mc
[82]	237	netcdf_inc=""
	238	netcdf_lib=""
[1]	239	netcdf_support=false
	240	node_usage=default
	241	numprocs=""
[206]	242	numprocs_atmos=0
	243	numprocs_ocean=0
[1]	244	OOPT=""
	245	openmp=false
	246	output_list=""
	247	package_list=""
	248	punkte="..........................................................."
	249	queue=none
	250	read_from_config=""
[5]	251	restart_run=false
[146]	252	return_addres=$(nslookup `hostname` 2>&1 \| grep "Address:" \| tail -1 \| awk '{print $2}')
[1]	253	if [[ $return_addres = 130.75.105.158 ]]
	254	then
	255	return_addres=172.20.25.41
	256	echo "+++ WARNING: return_addres changed to $return_addres !!!!!"
	257	fi
	258	return_password=""
	259	return_username=$LOGNAME
	260	remotecall=false
	261	remote_username=""
[102]	262	run_coupled_model=false
[1]	263	run_mode=""
	264	scirocco=false
	265	store_on_archive_system=true
	266	striche=" ----------------------------------------------------------------------------"
	267	silent=false
	268	source_list=""
	269	source_path=SOURCE
	270	tasks_per_node=""
	271	threads_per_task=1
	272	tmpcreate=false
	273	tmp_data_catalog=""
	274	transfer_problems=false
	275	usern=$LOGNAME
	276	working_directory=`pwd`
	277	TOPT=""
	278	XOPT=""
	279	zeit=$( date \| cut -c 12-19 )
	280
	281	typeset -i iec=0 iic=0 iin=0 ioc=0 iout=0 memory=0 stagein_anz=0 stageout_anz=0
[206]	282	typeset -i cputime i ii iia iii iio icycle inode ival jobges jobsek maxcycle minuten nodes pes sekunden tp1
[1]	283
[66]	284	typeset -R30 calltime
[1]	285	typeset -L20 spalte1
	286	typeset -L40 spalte2
	287	typeset -L60 spalte3
	288	typeset -L35 string1=`date`
	289	typeset -L12 string2=$usern
	290	typeset -L12 string3=$localhost_realname
	291	typeset -L12 string4
	292	typeset -L12 string5
[201]	293	typeset -L30 version="MRUN 2.0 Rev$Rev: 251 $"
[1]	294
	295
	296
	297	# EINZELNE VARIABLE FUER HAUPTPROGRAMM EXPORTIEREN
	298	export cpurest fname host localhost return_addres return_username remotecall tasks_per_node
	299
	300	# FOLGENDE VARIABLEN MUESSEN FUER DIE INTERPRETATION DER KONFIGURATIONSDATEI
	301	# EXPORTIERT WERDEN
	302	export afname config_file cpp_opts cpumax do_batch do_trace fname fromhost
[127]	303	export group_number input_list memory numprocs output_list queue run_mode
[1]	304
	305
	306
	307	# FEHLERBEHANDLUNG
	308	# BEI EXIT:
[83]	309	trap 'rm -rf $working_directory/tmp_mrun
[69]	310	if [[ $locat != localhost ]]
[1]	311	then
[22]	312	# if [[ ! -f ${mrun_path}/statistik/mrun_statistik ]]
	313	# then
	314	# cat > ${mrun_path}/statistik/mrun_statistik << %STATEND%
	315	#MRUN-calls on $localhost
	316	#
	317	#date and time user localhost remotehost termination mrun-command
	318	#--------------------------------------------------------------------------------------------------------------------
	319	#%STATEND%
	320	# chmod 666 ${mrun_path}/statistik/mrun_statistik
	321	# fi
	322	#
	323	# # EINTRAG IN DIE STATISTIK-DATEI
	324	# string4=$host
	325	# string5=$locat
	326	# if [[ "$job_on_file" = "" && $locat != control_c && $locat != user_abort ]]
	327	# then
	328	# if [[ $do_batch = true ]]
	329	# then
	330	# printf "$string1$string2$string3$string4$string5$mrun_com \n" >> ${mrun_path}/statistik/mrun_statistik
	331	# else
	332	# printf "$string1$string2$string3$string4$string5$mc \n" >> ${mrun_path}/statistik/mrun_statistik
	333	# fi
	334	# fi
[69]	335	echo " " > /dev/null
[1]	336	fi
	337
	338	if [[ $locat != normal && $locat != control_c && $locat != local_compile ]]
	339	then
	340
	341	# EVENTUELLE ERROR-KOMMANDOS ABARBEITEN
	342	(( i = 0 ))
	343	while (( i < iec ))
	344	do
	345	(( i = i + 1 ))
	346	printf "\n *** Execution of ERROR-command:\n"
	347	printf " >>> ${err_command[$i]}\n"
	348	eval ${err_command[$i]}
	349	done
	350	if [[ -n $interpreted_config_file ]] then
	351	rm -rf $interpreted_config_file
	352	fi
[71]	353	if [[ -n .mrun_environment ]] then
	354	rm -rf .mrun_environment
	355	fi
[1]	356	if [[ $tmpcreate = true ]]
	357	then
	358	printf "\n *** Contents of \"$TEMPDIR\":\n"
	359	ls -al; cd
	360	[[ $delete_temporary_catalog = true ]] && rm -rf $TEMPDIR
	361	fi
	362	if [[ -f ~/job_queue/JOBINFO.$QSUB_REQID ]]
	363	then
	364	rm -rf ~/job_queue/JOBINFO.$QSUB_REQID
	365	fi
	366	printf "\n\n+++ MRUN killed \n\n"
	367	elif [[ $locat != control_c ]]
	368	then
	369	printf "\n\n --> all actions finished\n\n"
	370	printf " Bye, bye $usern !!\n\n"
	371	fi' exit
	372
	373
	374	# BEI TERMINAL-BREAK:
[83]	375	trap 'rm -rf $working_directory/tmp_mrun
[69]	376	[[ $tmpcreate = true ]] && (cd; rm -rf $TEMPDIR)
[1]	377	if [[ -f ~/job_queue/JOBINFO.$QSUB_REQID ]]
	378	then
	379	rm -rf ~/job_queue/JOBINFO.$QSUB_REQID
	380	fi
	381	printf "\n+++ MRUN killed by \"^C\" \n\n"
	382	locat=control_c
	383	exit
	384	' 2
	385
	386
[22]	387	# CHECK IF THE PATH FOR THE PALM BINARIES (SCRIPTS+UTILITY-PROGRAMS) HAS
	388	# BEEN SET
	389	if [[ "$PALM_BIN" = "" ]]
	390	then
	391	printf "\n +++ environment variable PALM_BIN has not been set"
	392	printf "\n please set it to the directory where the PALM scripts are located"
	393	locat=palm_bin; exit
	394	fi
[180]	395	export PATH=$PALM_BIN:$PATH
[22]	396
	397
[1]	398
	399	# SHELLSCRIPT-OPTIONEN EINLESEN UND KOMMANDO NEU ZUSAMMENSETZEN, FALLS ES
	400	# FUER FOLGEJOBS BENOETIGT WIRD
[206]	401	while getopts :a:AbBc:Cd:D:Fg:G:h:H:i:IkK:m:M:n:o:Op:P:q:r:R:s:St:T:u:U:vxX:Y: option
[1]	402	do
	403	case $option in
	404	(a) afname=$OPTARG;;
	405	(A) store_on_archive_system=false; mc="$mc -A";;
	406	(b) do_batch=true; mc="$mc -b";;
	407	(B) delete_temporary_catalog=false; mc="$mc -B";;
	408	(c) config_file=$OPTARG; mc="$mc -c$OPTARG";;
[5]	409	(C) restart_run=true; mc="$mc -C";;
[1]	410	(d) fname=$OPTARG; mc="$mc -d$OPTARG";;
[210]	411	(D) cpp_opts="$cpp_opts $OPTARG"; mc="$mc -D'$OPTARG'";;
[79]	412	(F) job_on_file="-D"; mc="$mc -F";;
[122]	413	(g) group_number=$OPTARG; mc="$mc -g$OPTARG";;
[78]	414	(G) global_revision=$OPTARG; mc="$mc -G'$OPTARG'";;
[1]	415	(h) host=$OPTARG; mc="$mc -h$OPTARG";;
	416	(H) fromhost=$OPTARG; mc="$mc -H$OPTARG";;
	417	(i) input_list=$OPTARG; mc="$mc -i'$OPTARG'";;
	418	(I) ignore_archive_error=true; mc="$mc -I";;
	419	(k) keep_data_from_previous_run=true; mc="$mc -k";;
[210]	420	(K) additional_conditions="$OPTARG"; mc="$mc -K'$OPTARG'";;
[1]	421	(m) memory=$OPTARG; mc="$mc -m$OPTARG";;
	422	(M) makefile=$OPTARG; mc="$mc -M$OPTARG";;
	423	(n) node_usage=$OPTARG; mc="$mc -n$OPTARG";;
	424	(o) output_list=$OPTARG; mc="$mc -o'$OPTARG'";;
	425	(O) use_openmp=true; mc="$mc -O";;
	426	(p) package_list=$OPTARG; mc="$mc -p'$OPTARG'";;
	427	(P) return_password=$OPTARG; mc="$mc -P$OPTARG";;
	428	(q) queue=$OPTARG; mc="$mc -q$OPTARG";;
	429	(r) run_mode=$OPTARG; mc="$mc -r'$OPTARG'";;
	430	(R) remotecall=true;return_addres=$OPTARG; mc="$mc -R$OPTARG";;
	431	(s) source_list=$OPTARG; mc="$mc -s'$OPTARG'";;
	432	(S) read_from_config=false; mc="$mc -S";;
	433	(t) cpumax=$OPTARG; mc="$mc -t$OPTARG";;
	434	(T) tasks_per_node=$OPTARG; mc="$mc -T$OPTARG";;
	435	(u) remote_username=$OPTARG; mc="$mc -u$OPTARG";;
	436	(U) return_username=$OPTARG; mc="$mc -U$OPTARG";;
	437	(v) silent=true; mc="$mc -v";;
	438	(x) do_trace=true;set -x; mc="$mc -x";;
	439	(X) numprocs=$OPTARG; mc="$mc -X$OPTARG";;
[206]	440	(Y) run_coupled_model=true; coupled_dist=$OPTARG; mc="$mc -Y'$OPTARG'";;
[1]	441	(\?) printf "\n +++ unknown option $OPTARG \n"
	442	printf "\n --> type \"$0 ?\" for available options \n"
	443	locat=parameter;exit;;
	444	esac
	445	done
	446
	447
	448	# EVTL. POSITIONSPARAMETER EINLESEN
	449	# ZUR ZEIT GIBT ES NUR DEN PARAMETER ? (=KURZINFO)
	450	shift OPTIND-1
	451
	452
	453	# KURZE AUFRUFBESCHREIBUNG WIRD HIER AUSGEGEBEN
	454	if [[ "$1" = "?" ]]
	455	then
	456	(printf "\n *** mrun can be called as follows:\n"
[206]	457	printf "\n $mrun_script_name -b -c.. -d.. -D.. -f.. -F -h.. -i.. -I -K.. -m.. -o.. -p.. -r.. -R -s.. -t.. -T.. -v -x -X.. -Y.. <modus>\n"
[1]	458	printf "\n Description of available options:\n"
	459	printf "\n Option Description Default-Value"
	460	printf "\n -a base name of input files equiv. -d"
	461	printf "\n -A no archiving when using file-attribute fl"
	462	printf "\n -b batch-job on local machine ---"
	463	printf "\n -B do not delete temporary directory at end ---"
	464	printf "\n -c configuration file .mrun.config"
	465	printf "\n -d base name of files attached to program test"
	466	printf "\n -D preprocessor(cpp)-directives \"\" "
	467	printf "\n -F create remote job file only ---"
	468	printf "\n -h execution host $localhost_realname"
	469	printf "\n -i INPUT control list \"\" "
	470	printf "\n -I archiving errors of previous batch-jobs"
	471	printf "\n will be ignored"
	472	printf "\n -k keep data from previous run"
	473	printf "\n -K additional conditions for controling"
	474	printf "\n usage of conditional code and"
	475	printf "\n env-variables in configuration file \"\" "
	476	printf "\n -m memory demand in MB (batch-jobs) 0 MB"
	477	printf "\n -M Makefile name Makefile"
	478	printf "\n -n node usage (shared/not_shared) depending on -h"
	479	printf "\n -o OUTPUT control list \"\" "
	480	printf "\n -O use OpenMP ---"
	481	printf "\n -p software package list \"\" "
	482	printf "\n -q queue \"$queue\" "
	483	printf "\n -r run control list (combines -i -o) \"\" "
	484	printf "\n -s filenames of routines to be compiled \"\" "
	485	printf "\n must end with .f, .f90, .F, or .c !"
	486	printf "\n use \"..\" for more than one file and wildcards"
	487	printf "\n -s TEST compiles all files with w-permit"
	488	printf "\n -S config file interpreted by shellscript ---"
	489	printf "\n -t allowed cpu-time in seconds (batch) 0"
	490	printf "\n -T tasks per node depending on -h"
	491	printf "\n -u username on remote machine \"\" "
	492	printf "\n -v no prompt for confirmation ---"
	493	printf "\n -x tracing of mrun for debug purposes ---"
	494	printf "\n -X # of processors (on parallel machines) 1"
[206]	495	printf "\n -Y run coupled model, \"#1 #2\" with"
	496	printf "\n #1 atmosphere and #2 ocean processors \"#/2 #/2\" depending on -X"
[1]	497	printf "\n "
	498	printf "\n Possible values of positional parameter <modus>:"
	499	printf "\n \"?\" - this outline \n\n") \| more
	500	exit
	501	elif [[ "$1" != "" ]]
	502	then
	503	printf "\n +++ positional parameter $1 unknown \n"
	504	locat=parameter; exit
	505	fi
	506
	507
	508
	509	# KURZE STARTMELDUNG
	510	printf "\n*** $version "
	511	printf "\n will be executed. Please wait ..."
	512
	513
[82]	514
	515	# PRUEFEN, OB KONFIGURATIONS-DATEI VORHANDEN
	516	if [[ ! -f $config_file ]]
	517	then
	518	printf "\n\n +++ configuration file: "
	519	printf "\n $config_file"
	520	printf "\n does not exist"
	521	locat=connect; exit
	522	fi
	523
	524
	525	# HOST-IDENTIFIER (local_host) AUS KONFIGURATIONSDATEI BESTIMMEN
	526	line=""
	527	grep "%host_identifier" $config_file > tmp_mrun
	528	while read line
	529	do
[206]	530	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
[82]	531	then
	532	HOSTNAME=`echo $line \| cut -d" " -s -f2`
	533	host_identifier=`echo $line \| cut -d" " -s -f3`
[83]	534	if [[ $localhost_realname = $HOSTNAME ]]
[82]	535	then
	536	localhost=$host_identifier
	537	break
	538	fi
	539	fi
	540	done < tmp_mrun
	541
	542	if [[ "$localhost" = "" ]]
	543	then
	544	printf "\n\n +++ no host identifier found in configuration file \"$config_file\""
	545	printf "\n for local host \"$localhost_realname\"."
	546	printf "\n Please add line"
	547	printf "\n \"\%host_identifier $localhost_realname <identifier>\""
	548	printf "\n to the configuration file."
	549	locat=localhost; exit
	550	fi
	551
	552
	553	# HOSTSPEZIFISCHE VARIABLEN SETZEN
	554	case $localhost_realname in
	555	(breg-en0\|berni-en0) archive_system=tivoli;;
	556	(cs*) archive_system=ut;;
	557	(fimm.bccs.uib.no) fimm=true;;
	558	(gate\|n-sx) PATH=$PALM_BIN:$PATH:/usr/bin/nqsII;;
	559	(hreg-en0\|hanni-en0) archive_system=tivoli;;
	560	(scirocco) scirocco=true;;
	561	esac
	562
	563
	564
[1]	565	# BASISNAME DER INPUT-DATEIEN GLEICH ALLGEMEINEM BASISNAMEN SETZEN,
	566	# WENN NICHT VOM BENUTZER ANDERS BESTIMMT
	567	[[ "$afname" = "" ]] && afname=$fname
	568
	569
	570	# EVTL. RUN-MODUS DEN I/O-LISTEN HINZUFUEGEN
	571	if [[ "$run_mode" != "" ]]
	572	then
	573	input_list="$input_list $run_mode"
	574	output_list="$output_list $run_mode"
	575	fi
	576
	577
	578	# RECHNERNAMEN ABSPEICHERN, VON DEM AUS JOB GESTARTET WIRD,
	579	# ALLERDINGS NUR DANN, WENN NICHT PER OPTION -H BEREITS EIN WERT
	580	# ZUGEWIESEN WURDE (MRUN MACHT DIES IMMER, WENN ES SELBST BATCH-JOBS
	581	# STARTET)
	582	if [[ "$fromhost" = "" ]]
	583	then
	584	fromhost=$localhost
	585	fi
	586
	587
	588	# PRUEFEN, OB MRUN NUR TESTWEISE AUF DER LOKALEN MASCHINE KOMPILIEREN SOLL
	589	if [[ "$source_list" = LOCAL_COMPILE_TEST ]]
	590	then
	591	source_list=TEST
	592	local_compile=true
	593	host=$localhost
	594	fi
	595
	596
	597	# PRUEFEN, OB AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL
	598	# WERT VON do_remote WIRD FUER DATEIVERBINDUNGEN BENOETIGT.
	599	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
	600	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
	601	if [[ -n $host && "$host" != $localhost ]]
	602	then
	603	do_batch=true
	604	do_remote=true
	605	case $host in
[251]	606	(ibm\|ibmb\|ibmh\|ibms\|ibmy\|nech\|necriam\|lcsgib\|lcsgih\|lctit\|unics\|lcxt4) true;;
[1]	607	(*) printf "\n"
[83]	608	printf "\n +++ sorry: execution of batch jobs on remote host \"$host\""
	609	printf "\n is not available"
[1]	610	locat=nqs; (( iec = 0 )); exit;;
	611	esac
	612	else
	613	host=$localhost
	614	fi
	615
	616
	617	# ZUSATZBEDINGUNGEN (OPTION -K) AUSWERTEN
	618	if [[ -n $additional_conditions ]]
	619	then
[69]	620	# echo $additional_conditions \| cut -d" " -f1-3 \| read cond1 cond2 dummy
	621	cond1=`echo $additional_conditions \| cut -d" " -f1`
	622	cond2=`echo $additional_conditions \| cut -d" " -s -f2`
	623	dummy=`echo $additional_conditions \| cut -d" " -s -f3`
[1]	624	if [[ -n $dummy ]]
	625	then
	626	printf "\n +++ more than 2 additional conditions given for Option \"-K\""
	627	locat=options; exit
	628	fi
	629	fi
	630
	631
[206]	632	# KOPPLUNGSEIGENSCHAFTEN (-Y) AUSWERTEN UND coupled_mode BESTIMMEN
	633	if [[ $run_coupled_model = true ]]
	634	then
	635
	636	if [[ -n $coupled_dist ]]
	637	then
	638
	639	numprocs_atmos=`echo $coupled_dist \| cut -d" " -s -f1`
	640	numprocs_ocean=`echo $coupled_dist \| cut -d" " -s -f2`
	641
	642	if (( $numprocs_ocean + $numprocs_atmos != $numprocs ))
	643	then
	644
	645	printf "\n +++ number of processors does not fit to specification by \"-Y\"."
	646	printf "\n PEs (total) : $numprocs"
	647	printf "\n PEs (atmosphere): $numprocs_atmos"
	648	printf "\n PEs (ocean) : $numprocs_ocean"
	649	locat=coupling; exit
	650
	651	# REARRANGING BECAUSE CURRENTLY ONLY 1:1 TOPOLOGIES ARE SUPPORTED
	652	# THIS SHOULD BE REMOVED IN FUTURE
	653	elif (( $numprocs_ocean != $numprocs_atmos ))
	654	then
	655
	656	printf "\n +++ currently only 1:1 topologies are supported"
	657	printf "\n PEs (total) : $numprocs"
	658	printf "\n PEs (atmosphere): $numprocs_atmos"
	659	printf "\n PEs (ocean) : $numprocs_ocean"
	660	(( numprocs_atmos = $numprocs / 2 ))
	661	(( numprocs_ocean = $numprocs / 2 ))
	662	printf "\n +++ rearranged topology to $numprocs_atmos:$numprocs_ocean"
	663
	664	fi
	665
	666	else
	667
	668	(( numprocs_ocean = $numprocs / 2 ))
	669	(( numprocs_atmos = $numprocs / 2 ))
	670
	671	fi
	672	coupled_dist=`echo "$numprocs_atmos $numprocs_ocean"`
	673
	674	# GET coupled_mode FROM THE CONFIG FILE
	675	line=""
	676	grep "%cpp_options.-D__mpi2.$host" $config_file > tmp_mrun
	677	while read line
	678	do
	679	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" && ( $(echo $line \| cut -d" " -s -f4) = $cond1 \|\| $(echo $line \| cut -d" " -s -f4) = $cond2 ) ]]
	680	then
	681	coupled_mode="mpi2"
	682	fi
	683	done < tmp_mrun
	684
	685	fi
	686
	687
[1]	688	# PRUEFEN, OB EVTL. BEI VORHERGEHENDEM LAUF (KETTENJOB) EINE
	689	# ARCHIVIERUNG FEHLGESCHLAGEN IST
	690	if [[ -f ~/job_queue/ARCHIVE_ERROR_$fname ]]
	691	then
	692	if [[ $ignore_archive_error = false ]]
	693	then
	694	printf "\n +++ data archiving of previous run failed"
	695	printf "\n see directory \~/job_queue on remote machine"
	696	locat=archive; exit
	697	else
	698	printf "\n +++ warning: data archiving in a previous run failed"
	699	printf "\n MRUN continues, trying to get backup copy"
	700	fi
	701	fi
	702
	703
	704
	705	# LESEN UND INTERPRETIEREN DER KONFIGURATIONS-DATEI VOM SHELLSCRIPT AUS
	706	# VORUEBERGEHEND ZWINGEND AUF LINUX-RECHNERN
	707	if [[ "$read_from_config" = false ]]
	708	then
	709
	710	[[ $silent = false ]] && printf "\n Reading the configuration file... "
	711	while read zeile
	712	do
	713	[[ $silent = false ]] && printf "."
	714
	715
	716	# ZUERST EVENTUELL VORKOMMENDE ENVIRONMENT-VARIABLEN DURCH IHRE WERTE
	717	# ERSETZEN
	718	eval zeile=\"$zeile\"
	719
	720
	721	# INTERPRETATION DER ZEILE
[21]	722	if [[ "$(echo $zeile)" = "" ]]
[1]	723	then
[21]	724	# LEERZEILE, KEINE AKTION
	725	continue
[1]	726
[21]	727	elif [[ "$(echo $zeile \| cut -c1)" = "#" ]]
	728	then
	729
[1]	730	# ZEILE IST KOMMENTARZEILE
	731	true
	732
	733	elif [[ "$(echo $zeile \| cut -c1)" = "%" ]]
	734	then
	735
	736	# ZEILE DEFINIERT ENVIRONMENT-VARIABLE
	737	zeile=$(echo $zeile \| cut -c2-)
[69]	738	# echo $zeile \| cut -d" " -f1-5 \| read var value for_host for_cond1 for_cond2
	739	var=`echo $zeile \| cut -d" " -f1`
	740	value=`echo $zeile \| cut -d" " -s -f2`
	741	for_host=`echo $zeile \| cut -d" " -s -f3`
	742	for_cond1=`echo $zeile \| cut -d" " -s -f4`
	743	for_cond2=`echo $zeile \| cut -d" " -s -f5`
[1]	744
	745	if [[ "$for_host" = "" \|\| ( "$for_host" = $host && "$for_cond1" = "$cond1" && "$for_cond2" = "$cond2" ) \|\| $(echo "$input_list$output_list"\|grep -c "$for_host") != 0 ]]
	746	then
	747
	748	# BEI COMPILER- CPP- ODER LINKEROPTIONEN EVTL ":" DURCH " "
	749	# ERSETZEN. "::" WIRD DURCH ":" ERSETZT.
	750	value=`echo $value \| sed 's/::/%DUM%/g' \| sed 's/:/ /g' \| sed 's/%DUM%/:/g'`
	751
	752
	753	# ENVIRONMENT-VARIABLE WIRD WERT AUS KONFIGURATIONSDATEI
	754	# ZUGEWIESEN, WENN SIE SELBST NOCH KEINEN WERT UEBER DIE
	755	# ENTSPRECHENDE SCRIPT-OPTION ERHALTEN HAT. SOLCHE
	756	# VARIABLEN HAETTEN DANN DEN WERT "" ODER IM INTEGER-FALL DEN
	757	# WERT 0. ALLGEMEINE REGEL ALSO: SCRIPT-OPTION GEHT UEBER
	758	# KONFIGURATIONSDATEI
	759	if [[ "$(eval echo \$$var)" = "" \|\| "$(eval echo \$$var)" = "0" ]]
	760	then
	761	eval $var=\$value
	762
	763	# EVTL. BILDSCHIRMAUSGABEN DER ENVIRONMENT-VARIABLEN
	764	if [[ $do_trace = true ]]
	765	then
	766	printf "\n*** ENVIRONMENT-VARIABLE $var = $value"
	767	fi
	768	fi
	769
	770	# WENN ENVIRONMENT-VARIABLE HOST VEREINBART, DANN SOFORT AUSWERTEN
	771	# WERT VON do-remote WIRD BEI DATEIVERBINDUNGEN BENOETIGT
	772	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
	773	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
	774	if [[ $var = host ]]
	775	then
	776	if [[ -n $host && "$host" != $localhost ]]
	777	then
	778	do_batch=true
	779	do_remote=true
	780	case $host in
[251]	781	(ibm\|ibms\|ibmy\|lcsgib\|lcsgih\|lctit\|nech\|necriam\|unics\|lcxt4) true;;
[83]	782	(*) printf "\n +++ sorry: execution of batch jobs on remote host \"$host\""
	783	printf "\n is not available"
[1]	784	locat=nqs; exit;;
	785	esac
	786	else
	787	host=$localhost
	788	fi
	789	fi
	790
	791	# VOM BENUTZER DEFINIERTE ENVIRONMENT VARIABLEN MUESSEN PRINZIPIELL
	792	# EXPORTIERT WERDEN, DA SIE VIELLEICHT IN WEITER UNTEN AUFZURUFEN-
	793	# DEN PROGRAMMEN BENOETIGT WERDEN
	794	export $var
	795	fi
	796
	797
	798
	799
	800	elif [[ "$(echo $zeile \| cut -c1-3)" = "EC:" ]]
	801	then
	802
	803	# ZEILE DEFINIERT ERROR-KOMMANDO
	804	(( iec = iec + 1 ))
	805	zeile=$(echo $zeile \| cut -c4-)
	806	err_command[$iec]="$zeile"
	807
	808	elif [[ "$(echo $zeile \| cut -c1-3)" = "IC:" ]]
	809	then
	810
	811	# ZEILE DEFINIERT INPUT-KOMMANDO
	812	(( iic = iic + 1 ))
	813	zeile=$(echo $zeile \| cut -c4-)
	814	in_command[$iic]="$zeile"
	815
	816	elif [[ "$(echo $zeile \| cut -c1-3)" = "OC:" ]]
	817	then
	818
	819	# ZEILE DEFINIERT OUTPUT-KOMMANDO
	820	(( ioc = ioc + 1 ))
	821	zeile=$(echo $zeile \| cut -c4-)
	822	out_command[$ioc]="$zeile"
	823
	824	else
	825
	826	# ZEILE DEFINIERT DATEIVERBINDUNG. EINLESEN DER DATEIEIGENSCHAFTEN
	827	# s2a: in/out - Feld
	828	# s2b: loc - Feld (optional)
	829	# s2c: tr/ar - Feld (optional)
[69]	830	# echo $zeile \| cut -d" " -f1-2 \| read s1 s2
	831	s1=`echo $zeile \| cut -d" " -f1`
	832	s2=`echo $zeile \| cut -d" " -s -f2`
[1]	833	s2a=$(echo $s2 \| cut -d":" -f1)
	834	if [[ $(echo $s2 \| grep -c ":") = 0 ]]
	835	then
	836	s2b=""
	837	s2c=""
	838	else
[69]	839	# echo $s2 \| cut -d":" -f2-3 \| sed 's/:/ /g' \| read s2b s2c
	840	s2b=`echo $s2 \| cut -d":" -f2 \| sed 's/:/ /g'`
	841	s2c=`echo $s2 \| cut -d":" -s -f3 \| sed 's/:/ /g'`
[1]	842	fi
[69]	843	# echo $zeile \| cut -d" " -f3-6 \| read s3 s4 s5 s6
	844	s3=`echo $zeile \| cut -d" " -f3`
	845	s4=`echo $zeile \| cut -d" " -s -f4`
	846	s5=`echo $zeile \| cut -d" " -s -f5`
	847	s6=`echo $zeile \| cut -d" " -s -f6`
[1]	848
	849
	850	# ABSPEICHERN DER DATEIVERBINDUNG, FALLS IN INPUT- ODER OUTPUT-LIST
	851	# VERMERKT. VARIABLE S3 KANN AUCH LISTE ENTHALTEN (FELDTRENNER ":")
	852	# DATEIVERBINDUNG WIRD DANN NICHT ABGESPEICHERT UND GEPRUEFT, WENN
	853	# PROGRAMMLAUF AUF REMOTE-MASCHINE ERFOLGT UND DATEI NUR LOKAL VOR-
	854	# HANDEN SEIN MUSS (D.H. s2b = loc)
	855	IFSALT="$IFS"; IFS="$IFS:"
	856	if [[ "$s2a" = in && ! ( $do_remote = true && ( "$s2b" = loc \|\| "$s2b" = locopt ) ) ]]
	857	then
	858	found=false
	859	for actual in $input_list
	860	do
	861	for formal in $s3
	862	do
	863	[[ $actual = $formal \|\| "$formal" = "-" ]] && found=true
	864	done
	865	done
	866	if [[ $found = true ]]
	867	then
	868	(( iin = iin + 1 ))
	869	localin[$iin]=$s1; transin[$iin]=$s2b; actionin[$iin]=$s2c;
	870	typein[$iin]=$s3; pathin[$iin]=$s4; endin[$iin]=$s5;
	871	extin[$iin]=$s6
	872	fi
	873	elif [[ "$s2a" = out && ! ( $do_remote = true && "$s2b" = loc ) ]]
	874	then
	875	found=false
	876	for actual in $output_list
	877	do
	878	for formal in $s3
	879	do
	880	[[ $actual = $formal \|\| "$formal" = "-" ]] && found=true
	881	done
	882	done
	883	if [[ $found = true ]]
	884	then
	885	(( iout = iout + 1 ))
	886	localout[$iout]=$s1; actionout[$iout]=$s2c; typeout[$iout]=$s3;
	887	pathout[$iout]=$s4; endout[$iout]=$s5; extout[$iout]=$s6
	888	fi
	889	elif [[ "$s2a" != in && "$s2a" != out ]]
	890	then
	891	printf "\n +++ I/O-attribute in configuration file $config_file has the invalid"
	892	printf "\n value \"$s2\". Only \"in\" and \"out\" are allowed!"
	893	locat=connect; exit
	894	fi
	895	IFS="$IFSALT"
	896	fi
	897	done < $config_file
	898
	899	else
	900
	901
	902	# INTERPRETATION DER KONFIGURATIONSDATEI MITTELS FORTRAN 90 - PROGRAMM
	903	[[ $silent = false ]] && printf "..."
	904	export cond1 cond2 config_file do_remote do_trace input_list localhost output_list
	905	export interpreted_config_file=.icf.$RANDOM
	906
	907
[69]	908
	909	# ENVIRONMENT-VARIABLEN FUER INTERPRET_CONFIG UEBER NAMELIST_DATEI ZUR
	910	# VERFUEGUNG STELLEN
	911	cat > .mrun_environment << %%END%%
	912	&mrun_environment cond1 = '$cond1', cond2 = '$cond2',
	913	config_file = '$config_file', do_remote = '$do_remote',
	914	do_trace = '$do_trace', host = '$host',
	915	input_list = '$input_list', icf = '$interpreted_config_file',
	916	localhost = '$localhost', output_list = '$output_list' /
	917
	918	%%END%%
	919
	920	# WERTE VON MRUN-OPTIONEN SICHERN UND DAMIT GEGEBENENFALLS SPAETER DIE
	921	# IN DER KONFIGURAIONSDATEI ANGEGEBENEN WERTE UEBERSTEUERN
	922	mrun_memory=$memory
[127]	923	mrun_group_number=$group_number
[69]	924	mrun_cpumax=$cpumax
	925	mrun_numprocs=$numprocs
	926
[251]	927	if [[ $localhost_realname = "sx-fep" ]]
[66]	928	then
[251]	929	/home/COAR/NC/raasch/pub/interpret_config_necriam.x
[66]	930	else
	931	interpret_config.x
	932	fi
[71]	933	rm .mrun_environment
[1]	934
[71]	935
[1]	936	# AUSFUEHRUNG DER GENERIERTEN SHELL-KOMMANDOS IN DIESER SHELL
	937	chmod u+x $interpreted_config_file
	938	export PATH=$PATH:.
	939	. $interpreted_config_file
[71]	940	rm $interpreted_config_file
[1]	941
[71]	942
[69]	943	# OPTIONSWERTE UEBERSTEUERN KONFIGURATIONSDATEI
[71]	944	[[ $mrun_memory != 0 ]] && memory=$mrun_memory
[127]	945	[[ "$mrun_group_number" != "none" ]] && group_number=$mrun_group_number
[71]	946	[[ $mrun_cpumax != 0 ]] && cpumax=$mrun_cpumax
	947	[[ "$mrun_numprocs" != "" ]] && numprocs=$mrun_numprocs
[69]	948
[1]	949	fi
	950
	951
	952	# QUELLTEXTVERZEICHNIS AUF LOKALER MASCHINE AUS KONFIGURATIONSDATEI
	953	# BESTIMMEN (WUERDE SONST EVTL. DAS VERZEICHNIS DES JEWEILS UNTER -h
	954	# ANGEGEBENEN REMOTE-RECHNERS SEIN)
	955	# BEI BATCH-JOBS SIND DIE ZU UEBERSETZENDEN PROGRAMMTEILE SCHON KOMPLETT
	956	if [[ "$SOURCES_COMPLETE" = "" ]]
	957	then
	958
	959	# ZUERST PRUEFEN, OB EIN GLOBALER QUELLTEXTPFAD FUER ALLE RECHNER
	960	# VEREINBART WURDE
	961	source_path=""
	962	line=""
	963	grep "%source_path" $config_file > tmp_mrun
	964	while read line
	965	do
	966	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
	967	then
	968	if [[ "$(echo $line \| cut -d" " -f3)" = "" ]]
	969	then
	970	global_source_path=`echo $line \| cut -d" " -f2`
	971	fi
	972	fi
	973	done < tmp_mrun
	974
	975	line=""
	976	found=false
	977	grep " $localhost" $config_file \| grep "%source_path" > tmp_mrun
	978	while read line
	979	do
	980	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
	981	then
	982	if [[ $found = true ]]
	983	then
	984	printf "\n\n +++ more than one source path found in configuration file"
	985	printf "\n for local host \"$localhost\" "
	986	locat=source_path; exit
	987	fi
	988	source_path=`echo $line \| cut -d" " -f2`
	989	found=true
	990	fi
	991	done < tmp_mrun
	992	rm tmp_mrun
	993
	994	if [[ "$source_path" = "" ]]
	995	then
	996	if [[ "$global_source_path" != "" ]]
	997	then
	998	source_path=$global_source_path
	999	else
	1000	printf "\n\n +++ no source path found in configuration file"
	1001	printf "\n for local host \"$localhost\" "
	1002	locat=source_path; exit
	1003	fi
	1004	fi
	1005	eval source_path=$source_path
	1006
	1007	if [[ ! -d $source_path ]]
	1008	then
	1009	printf "\n\n +++ source path \"$source_path\" on local host"
	1010	printf "\n \"$localhost\" does not exist"
	1011	locat=source_path; exit
	1012	fi
	1013
	1014	fi
	1015
	1016
[78]	1017	# GLOBALE REVISIONSNUMMER ERMITTELN (FORTSETZUNGSLAEUFEN WIRD DIESE
	1018	# DURCH OPTION -G MITGETEILT)
	1019	if [[ "$global_revision" = "" ]]
	1020	then
	1021	global_revision=`svnversion $source_path 2>/dev/null`
	1022	global_revision="Rev: $global_revision"
	1023	fi
[1]	1024
[78]	1025
[1]	1026	# NOCHMAL PRUEFEN, OB AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL
	1027	# (HOST KANN IN KONFIGURATIONSDATEI ANDERS FESTGELEGT WORDEN SEIN)
	1028	# WERT VON do_remote WIRD FUER DATEIVERBINDUNGEN BENOETIGT.
	1029	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
	1030	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
	1031	if [[ -n $host && "$host" != $localhost ]]
	1032	then
	1033	do_batch=true
	1034	do_remote=true
	1035	case $host in
[251]	1036	(ibm\|ibmb\|ibmh\|ibms\|ibmy\|lcsgib\|lcsgih\|lctit\|nech\|necriam\|unics\|lcxt4) true;;
[1]	1037	(*) printf "\n"
[83]	1038	printf "\n +++ sorry: execution of batch jobs on remote host \"$host\""
	1039	printf "\n is not available"
[1]	1040	locat=nqs; (( iec = 0 )); exit;;
	1041	esac
	1042	else
	1043	host=$localhost
	1044	fi
	1045
	1046
	1047	# PRUEFUNG EINIGER PROZESSORZAHLANGABEN BEI RECHNUNGEN AUF PARALLELRECHNERN
	1048	if [[ "$cond1" = parallel \|\| "$cond2" = parallel ]]
	1049	then
	1050
	1051	# PRUEFEN, OB DIE ANZAHL DER ZU VERWENDENDEN PES ANGEGEBEN WURDE
	1052	if [[ ! -n $numprocs ]]
	1053	then
	1054	printf "\n"
	1055	printf "\n +++ option \"-K parallel\" requires additional specification"
	1056	printf "\n of the number of processors to be used by"
	1057	printf "\n mrun-option \"-X\" or by environment-variable"
	1058	printf "\n \"numprocs\" in the configuration file"
	1059	locat=numprocs; (( iec = 0 )); exit
	1060	fi
	1061
	1062	# PRUEFEN, OB DIE PROZESSORANZAHL PRO KNOTEN ANGEGEBEN WURDE (GGF.
	1063	# DEFAULT-WERT SETZEN) UND OB SIE EIN GANZZAHLIGER TEILER DER
	1064	# GESAMTPROZESSORANZAHL IST
[251]	1065	if [[ $host = nech \|\| $host = necriam \|\| $host = ibmh \|\| $host = ibmb \|\| $host = ibms ]]
[1]	1066	then
	1067	[[ "$tasks_per_node" = "" ]] && tasks_per_node=6
	1068	(( ival = $tasks_per_node ))
	1069	(( pes = numprocs ))
	1070	# if [[ $(echo $package_list \| grep -c dvrp_graphics+1PE) = 1 ]]
	1071	# then
	1072	# (( pes = pes - 1 ))
	1073	# fi
	1074	(( ii = pes / ival ))
	1075	if (( pes - ii * ival > 0 ))
	1076	then
	1077	printf "\n"
	1078	printf "\n +++ tasks per node (option \"-T\") must be an integral"
	1079	printf "\n divisor of the total number of processors (option \"-X\")"
	1080	printf "\n values of this mrun-call: \"-T $tasks_per_node\" \"-X $numprocs\""
	1081	locat=tasks_per_node; (( iec = 0 )); exit
	1082	fi
	1083	fi
	1084
	1085	# IBMY HAT NUR EINEN KNOTEN
	1086	if [[ $host = ibmy ]]
	1087	then
	1088	if [[ "$tasks_per_node" != "" && "$tasks_per_node" != "$numprocs" ]]
	1089	then
	1090	printf "\n"
	1091	printf "\n +++ on ibmy, tasks per node (option \"-T\") must be equal to the"
	1092	printf "\n total number of processors (option \"-X\")"
	1093	printf "\n values of this mrun-call: \"-T $tasks_per_node\" \"-X $numprocs\""
	1094	locat=tasks_per_node; (( iec = 0 )); exit
	1095	fi
	1096	fi
	1097
	1098	# FALLS OPENMP PARALLELISIERUNG VERWENDET WERDEN SOLL, ANZAHL VON THREADS
	1099	# SETZEN UND ZAHL DER TASKS PRO KNOTEN AUF 1 SETZEN
	1100	if [[ $use_openmp = true ]]
	1101	then
	1102	threads_per_task=$tasks_per_node
	1103	tasks_per_node=1
	1104	fi
	1105	OOPT="-O $threads_per_task"
	1106	TOPT="-T $tasks_per_node"
	1107
	1108	# GESAMTZAHL DER KNOTEN BESTIMMEN
	1109	if [[ "$tasks_per_node" != "" ]]
	1110	then
	1111	(( nodes = numprocs / ( tasks_per_node * threads_per_task ) ))
	1112	fi
	1113
	1114	# PRUEFEN, OB NODE USAGE EINEN ERLAUBTEN WERT HAT BZW. DEN DEFAULT
	1115	# SETZEN
	1116	if [[ $node_usage = default ]]
	1117	then
	1118	if [[ $host = ibms ]]
	1119	then
	1120	node_usage=shared
[118]	1121	elif [[ $host = lctit ]]
	1122	then
[129]	1123	node_usage=sla3
[181]	1124	elif [[ $(echo $host \| cut -c1-5) = lcsgi ]]
	1125	then
	1126	node_usage=singlejob
[1]	1127	else
	1128	node_usage=not_shared
	1129	fi
	1130	fi
[181]	1131
	1132	if [[ $node_usage != shared && $node_usage != not_shared && $node_usage != singlejob && "$(echo $node_usage \| cut -c1-3)" != "sla" && $node_usage != novice ]]
[1]	1133	then
	1134	printf "\n"
	1135	printf "\n +++ node usage (option \"-n\") is only allowed to be set"
	1136	printf "\n \"shared\" or \"not_shared\""
	1137	locat=tasks_per_node; (( iec = 0 )); exit
	1138	fi
	1139
	1140	fi
	1141
	1142	# PRUEFEN, OB HOSTFILE EXISTIERT
	1143	if [[ -n $hostfile ]]
	1144	then
	1145	if [[ ! -f $hostfile ]]
	1146	then
	1147	printf "\n"
	1148	printf "\n +++ hostfile \"$hostfile\" does not exist"
	1149	locat=hostfile; exit
	1150	fi
	1151	fi
	1152
	1153	# PRUEFEN, OB RHOSTS DATEI EXISTIERT. GEGEBENENFALLS ANLEGEN BZW. ERWEITERN
	1154	if [[ $host = ibmy && $do_remote = false ]]
	1155	then
	1156	if [[ ! -f $HOME/.rhosts ]]
	1157	then
	1158	echo "gfdl5.yonsei.ac.kr" > $HOME/.rhosts
	1159	printf "\n\n *** file:"
	1160	printf "\n $HOME/.rhosts"
	1161	printf "\n was created\n"
	1162	fi
	1163	if [[ $(grep -c gfdl5.yonsei.ac.kr $HOME/.rhosts) = 0 ]]
	1164	then
	1165	echo "gfdl5.yonsei.ac.kr" >> $HOME/.rhosts
	1166	printf "\n\n *** file:"
	1167	printf "\n $HOME/.rhosts"
	1168	printf "\n was extended by the name of the current host\n"
	1169	fi
	1170	fi
	1171
	1172
	1173
	1174	# FALLS NICHT VORGEGEBEN, DEFAULT-QUEUE AUF DER ZIELMASCHINE FESTLEGEN
	1175	if [[ $queue = none ]]
	1176	then
	1177	case $host in
	1178	(ibmb) if [[ $node_usage = shared ]]
	1179	then
	1180	queue=cshare
	1181	else
	1182	queue=csolo
	1183	fi;;
	1184	(ibmh) if [[ $node_usage = shared ]]
	1185	then
	1186	queue=cshare
	1187	else
	1188	queue=csolo
	1189	fi;;
	1190	(ibmy) queue=parallel;;
[191]	1191	(lcsgib) queue=bigq;;
	1192	(lcsgih) queue=bigq;;
[129]	1193	(lctit) queue=sla3;;
[1]	1194	(nech) queue=none;;
[251]	1195	(necriam) queue=SS;;
[1]	1196	(unics) queue=unics;;
	1197	esac
	1198	fi
	1199
	1200
	1201	# VOLLSTAENDIGE DATEINAMEN DER INPUT-FILES BILDEN,
	1202	# INPUT-DATEIEN AUF VORHANDENSEIN PRUEFEN UND EVTL. HOECHSTE ZYKLUSNUMMER
	1203	# ERMITTELN
	1204	(( i = 0 ))
	1205	while (( i < iin ))
	1206	do
	1207	(( i = i + 1 ))
	1208	(( maxcycle = 0 ))
	1209
	1210	# NAMENSBILDUNG (EVTL. IST FESTER DATEINAME VORGEGEBEN)
	1211	if [[ "${actionin[$i]}" = di ]]
	1212	then
	1213	remotepathin[$i]=${pathin[$i]}/${endin[$i]} # REMOTE-PFAD ERST AUF
	1214	# REM-MASCHINE AUSWERTEN
	1215	eval filename=${pathin[$i]}/${endin[$i]}
	1216	else
	1217	remotepathin[$i]=${pathin[$i]}/${afname}${endin[$i]} # REMOTE-PFAD ERST AUF
	1218	# REM-MASCHINE AUSWERTEN
	1219	eval filename=${pathin[$i]}/${afname}${endin[$i]}
	1220	fi
	1221
	1222	# PRUEFEN AUF VORHANDENSEIN
	1223	if [[ $(ls $filename* 2>&1 \| grep -c "not found") = 1 \|\| \
	1224	$(ls $filename* 2>&1 \| grep -c "No such file") = 1 \|\| \
	1225	$(ls $filename* 2>&1 \| grep -c "does not exist") = 1 ]]
	1226	then
	1227	# DATEIEN MIT EXTENSION (Z.B. NC) MUESSEN NICHT ZWINGEND VORHANDEN
	1228	# SEIN, DESHALB IN SOLCHEN FAELLEN KEIN ABBRUCH. DIES IST NUR EINE
	1229	# VORUEBERGEHENDE LOESUNG (OKT 05). NICHT ZWINGEND BENOETIGTE
	1230	# EINGABEDATEIEN SOLLTEN EINE SPEZIELLE OPTION IN DER DATEI-
	1231	# VERBINDUNGSANWEISUNG BEKOMMEN (Z.B. inopt?)
	1232	if [[ "${transin[$i]}" != "locopt" ]]
	1233	then
	1234	printf "\n\n +++ INPUT-file: "
	1235	if [[ "${extin[$i]}" = "" ]]
	1236	then
	1237	printf "\n $filename"
	1238	else
	1239	printf "\n $filename.${extin[$i]}"
	1240	fi
	1241	printf "\n does not exist\n"
	1242	locat=input; exit
	1243	else
	1244	transin[$i]="unavailable"
	1245	fi
	1246	else
	1247
	1248	# ZYKLUSNUMMER FESTSTELLEN
	1249	ls -1 -d $filename > filelist 2>/dev/null
	1250	ls -1 -d $filename.* >> filelist 2>/dev/null
	1251	while read zeile
	1252	do
	1253	cycle=$(print $zeile \| cut -f2 -d".")
	1254	if [[ "$cycle" = "$zeile" ]]
	1255	then
	1256	(( icycle = 0 ))
	1257	elif [[ "$cycle" = "${extin[$i]}" ]]
	1258	then
	1259	(( icycle = 0 ))
	1260	else
	1261	(( icycle = $cycle ))
	1262	fi
	1263	if (( icycle > maxcycle ))
	1264	then
	1265	(( maxcycle = icycle ))
	1266	file_to_be_used=$zeile
	1267	fi
	1268	done <filelist
	1269	rm filelist
	1270
	1271	# EVTL. ZYKLUSNUMMER AN DATEINAMEN ANFUEGEN
	1272	if (( maxcycle > 0 ))
	1273	then
	1274	if [[ "${extin[$i]}" != " " && "${extin[$i]}" != "" ]]
	1275	then
	1276	filename=${filename}.$maxcycle.${extin[$i]}
	1277	else
	1278	filename=${filename}.$maxcycle
	1279	fi
	1280	else
	1281	if [[ "${extin[$i]}" != " " && "${extin[$i]}" != "" ]]
	1282	then
	1283	filename=${filename}.${extin[$i]}
	1284	fi
	1285	fi
	1286
	1287	# DATEINAMEN OHNE PFAD ABER MIT ZYKLUSNUMMER ABSPEICHERN,
	1288	# DA SPAETER BEI RUECKSPEICHERN VOM ARCHIVSYSTEM EVTL. BENOETIGT
	1289	absnamein[$i]=$filename
	1290	if (( maxcycle > 0 ))
	1291	then
	1292	if [[ "${actionin[$i]}" = di ]]
	1293	then
	1294	frelin[$i]=${endin[$i]}.$maxcycle
	1295	else
	1296	frelin[$i]=${afname}${endin[$i]}.$maxcycle
	1297	fi
	1298	else
	1299	if [[ "${actionin[$i]}" = di ]]
	1300	then
	1301	frelin[$i]=${endin[$i]}
	1302	else
	1303	frelin[$i]=${afname}${endin[$i]}
	1304	fi
	1305	fi
	1306
	1307	fi
	1308	done
	1309
	1310
	1311	# VOLLSTAENDIGE DATEINAMEN (OHNE $ ODER ~) DER OUTPUT-FILES BILDEN,
	1312	# OUTPUT-DATEIEN AUF VORHANDENSEIN PRUEFEN UND EVTL. HOECHSTE ZYKLUSNUMMER
	1313	# ERMITTELN ODER, FALLS NICHT VORHANDEN, PRUEFEN, OB SIE SICH ANLEGEN LASSEN
	1314	# DIESE AKTIONEN FINDEN NICHT STATT, WENN PROGRAMM AUF REMOTE-MASCHINE
	1315	# RECHNET UND DATEI ANSCHLIESSEND TRANSFERIERT WERDEN SOLL!
	1316	(( i = 0 ))
	1317	while (( i < iout ))
	1318	do
	1319	(( i = i + 1 ))
	1320	if [[ ! ( $fromhost != $localhost && ( "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = tra \|\| "${actionout[$i]}" = trpe ) ) ]]
	1321	then
	1322	if [[ "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = trpe ]]
	1323	then
	1324	actionout[$i]=""
	1325	elif [[ "${actionout[$i]}" = tra ]]
	1326	then
	1327	actionout[$i]=a
	1328	fi
	1329	(( maxcycle = 0 ))
	1330	eval filename=${pathout[$i]}/${fname}${endout[$i]}
	1331	eval catalogname=${pathout[$i]}
	1332	if [[ $(ls $filename* 2>&1 \| grep -c "not found") = 1 \|\| \
	1333	$(ls $filename* 2>&1 \| grep -c "No such file") = 1 \|\| \
	1334	$(ls $filename* 2>&1 \| grep -c "does not exist") = 1 ]]
	1335	then
	1336
	1337	# OUTPUT-DATEI NICHT VORHANDEN. PRUEFEN, OB ANLEGEN MOEGLICH.
	1338	if cat /dev/null > $filename
	1339	then
	1340	rm $filename
	1341	else
	1342
	1343	# PRUEFEN, OB KATALOG VORHANDEN UND EVTL. DIESEN ANLEGEN
	1344	if [[ ! -d $catalogname ]]
	1345	then
	1346	if mkdir -p $catalogname
	1347	then
	1348	printf "\n\n *** directory:"
	1349	printf "\n $catalogname"
	1350	printf "\n was created\n"
	1351	else
	1352	printf "\n\n +++ OUTPUT-file:"
	1353	printf "\n $filename"
	1354	printf "\n cannot be created, because directory does not exist"
	1355	printf "\n and cannot be created either"
	1356	printf "\n"
	1357	locat=output ; exit
	1358	fi 2>/dev/null
	1359	else
	1360	printf "\n\n +++ OUTPUT-file:"
	1361	printf "\n $filename"
	1362	printf "\n cannot be created, although directory exists"
	1363	printf "\n"
	1364	locat=output ; exit
	1365	fi
	1366	fi 2>/dev/null
	1367	else
	1368
	1369	# ZYKLUSNUMMER FESTSTELLEN
	1370	ls -1 -d $filename > filelist 2>/dev/null
	1371	ls -1 -d $filename.* >> filelist 2>/dev/null
	1372	while read zeile
	1373	do
	1374	cycle=$(print $zeile \| cut -f2 -d".")
	1375	if [[ "$cycle" = "$zeile" \|\| "$cycle" = ${extout[$i]} ]]
	1376	then
	1377	(( icycle = 1 ))
	1378	else
	1379	(( icycle = $cycle + 1 ))
	1380	fi
	1381	if (( icycle > maxcycle ))
	1382	then
	1383	(( maxcycle = icycle ))
	1384	fi
	1385	done <filelist
	1386	rm filelist
	1387	fi
	1388
	1389	# EVTL. ZYKLUSNUMMER AN DATEINAMEN ANFUEGEN UND PRUEFEN, OB SICH
	1390	# DATEI AUCH WIRKLICH ANLEGEN LAESST. IM APPEND-FALL MUSS AN DEN
	1391	# HOECHSTEN VORHANDENEN ZYKLUS-ANGEHAENGT WERDEN. ANLAGEPRUEFUNG
	1392	# IST DANN NATUERLICH NICHT ZULAESSIG BZW. MOEGLICH
	1393	if [[ "${actionout[$i]}" != a ]]
	1394	then
	1395	if (( maxcycle > 0 ))
	1396	then
	1397	filename=${filename}.$maxcycle
	1398	if cat /dev/null > $filename
	1399	then
	1400	rm $filename
	1401	else
	1402	printf "\n +++ OUTPUT-file:"
	1403	printf "\n $filename"
	1404	printf "\n cannot be created"
	1405	locat=output ; exit
	1406	fi
	1407	fi
	1408	else
	1409	(( maxcycle = maxcycle - 1 ))
	1410	if (( maxcycle > 0 ))
	1411	then
	1412	filename=${filename}.$maxcycle
	1413	fi
	1414	fi
	1415
	1416	# DATEINAMEN OHNE PFAD ABER MIT ZYKLUSNUMMER ABSPEICHERN,
	1417	# DA SPAETER BEI ABLAGE AUF ARCHIVSYSTEM BZW. FUER
	1418	# DATEI OUTPUT_FILE_CONNECTIONS EVTL. BENOETIGT
	1419	pathout[$i]=$filename
	1420	if (( maxcycle > 0 ))
	1421	then
	1422	frelout[$i]=${fname}${endout[$i]}.$maxcycle
	1423	else
	1424	frelout[$i]=${fname}${endout[$i]}
	1425	fi
	1426
	1427	fi
	1428	done
	1429
	1430
[83]	1431	# DAS DVRP-PAKET ERFORDERT EINE ENTSPRECHENDE BIBLIOTHEK
	1432	if [[ $(echo $package_list \| grep -c dvrp_graphics) != 0 ]]
	1433	then
	1434	if [[ "$dvrp_inc" = "" ]]
	1435	then
	1436	printf "\n\n +++ no value for \"dvrp_inc\" given in configuration file"
	1437	printf "\n This is required for the dvrp_graphics package.\n"
	1438	locat=dvrp; exit
	1439	fi
	1440	if [[ "$dvrp_lib" = "" ]]
	1441	then
	1442	printf "\n\n +++ no value for \"dvrp_lib\" given in configuration file"
	1443	printf "\n This is required for the dvrp_graphics package.\n"
	1444	locat=dvrp; exit
	1445	fi
	1446	fi
	1447
	1448
[1]	1449	# PRUEFEN, OB ENTWEDER HAUPTPROGRAMM ODER NUR EIN AUSFUEHRBARES
	1450	# PROGRAMM VEREINBART WURDE (IN DIESEM FALL BRAUCHT IM WEITEREN NICHT
	1451	# UEBERSETZT ZU WERDEN)
	1452	if [[ "$mainprog" = "" && "$executable" = "" ]]
	1453	then
	1454	printf "\n +++ neither main program nor executable defined"
	1455	locat=source; exit
	1456	elif [[ "$mainprog" != "" && "$executable" != "" ]]
	1457	then
	1458	printf "\n +++ main program as well as executable defined"
	1459	locat=source; exit
	1460	elif [[ "$mainprog" = "" && "$executable" != "" ]]
	1461	then
	1462	do_compile=false
	1463	fi
	1464
	1465
[191]	1466	# SOURCE-VERZEICHNIS ZUM AUFSAMMELN DER ZU UEBERSETZENDEN PROGRAMMTEILE
	1467	# ERZEUGEN. HIERHIN WERDEN SPAETER IM FALL VON BATCH-JOBS AUCH DAS MRUN-
	1468	# SCRIPTS SOWIE DIE KONFIGURATIONSDATEI KOPIERT
[193]	1469	if [[ $restart_run != true && "$SOURCES_COMPLETE" = "" ]]
[191]	1470	then
	1471	rm -rf SOURCES_FOR_RUN_$fname
	1472	mkdir SOURCES_FOR_RUN_$fname
	1473	fi
	1474
	1475
[1]	1476	# ALLE ZU UEBERSETZENDEN PROGRAMMTEILE ZUSAMMENSAMMELN
	1477	# BEI BATCH-JOBS IST DIES NICHT NOETIG, WEIL DIE PROGRAMMTEILE BEREITS DURCH
	1478	# DEN MRUN-AUFRUF ERMITTELT SIND, DER DEN BATCH-JOB GENERIERT HAT, UND
	1479	# IM VERZEICHNIS SOURCES_FOR_RUN_... ABGELEGT SIND
	1480	if [[ $do_compile = true && "$SOURCES_COMPLETE" = "" ]]
	1481	then
	1482
[5]	1483	[[ "$source_list" = LM ]] && source_list=LOCALLY_MODIFIED
	1484	[[ "$source_list" = WP ]] && source_list=WRITE_PERMIT
[1]	1485
	1486
	1487	# EVTL. ZU UEBERSETZENDE PROGRAMMTEILE DADURCH BESTIMMEN, DASS GEPRUEFT
	1488	# WIRD, WELCHE DATEIEN WRITE-PERMIT BESITZEN (DATEIEN SOLLTEN DESHALB
	1489	# UNTER RCS-KONTROLLE STEHEN). MIT DER VARIABLEN EXCLUDE KOENNEN
	1490	# BESTIMMTE DATEIEN GRUNDSAETZLICH VON DER UEBERSETZUNG AUSGESCHLOSSEN
	1491	# WERDEN. DIES IST NUR BEI MANUELLEM START VON MRUN DURCH DEN BENUTZER
	1492	# MOEGLICH, DA BEI AUTOMATISCHEN RESTARTS TEST DURCH DIE TATSAECHLICH
	1493	# ZU UBERSETZENDEN DATEIEN ERSETZT IST.
	1494	# ALLE ERMITTELTEN DATEIEN WERDEN IM VERZEICHNIS SOURCES_FOR_RUN_...
	1495	# GESAMMELT
[5]	1496	if [[ "$source_list" = WRITE_PERMIT ]]
[1]	1497	then
	1498
	1499	source_list=""
	1500	cd $source_path
	1501
	1502
	1503	# ALLE MOEGLICHEN QUELLCODEDATEIEN AUFLISTEN
	1504	Names=$(ls -1 *.f90 2>&1)
	1505	[[ $(echo $Names \| grep -c '*.f90') = 0 ]] && Filenames="$Names"
	1506	Names=$(ls -1 *.F90 2>&1)
	1507	[[ $(echo $Names \| grep -c '*.F90') = 0 ]] && Filenames="$Filenames $Names"
	1508	Names=$(ls -1 *.F 2>&1)
	1509	[[ $(echo $Names \| grep -c '*.F') = 0 ]] && Filenames="$Filenames $Names"
	1510	Names=$(ls -1 *.f 2>&1)
	1511	[[ $(echo $Names \| grep -c '*.f') = 0 ]] && Filenames="$Filenames $Names"
	1512	Names=$(ls -1 *.c 2>&1)
	1513	[[ $(echo $Names \| grep -c '*.c') = 0 ]] && Filenames="$Filenames $Names"
	1514
	1515
	1516	# DATEIEN MIT WRITE-PERMIT NACH SOURCES_FOR_RUN_... KOPIEREN
	1517	for dateiname in $Filenames
	1518	do
	1519	if [[ -w $dateiname ]]
	1520	then
	1521	if [[ "$exclude" = "" \|\| $(echo $exclude \| grep -c $dateiname) = 0 ]]
	1522	then
	1523	cp $dateiname $working_directory/SOURCES_FOR_RUN_$fname
	1524	source_list=$source_list"$dateiname "
	1525	fi
	1526	fi
	1527	done
	1528
	1529	cd - > /dev/null
	1530
	1531
[5]	1532	elif [[ "$source_list" = LOCALLY_MODIFIED ]]
	1533	then
	1534
	1535	# MODIFIZIERTE DATEIEN DER SVN-ARBEITSKOPIE BESTIMMEN
	1536	source_list=""
	1537	cd $source_path
	1538
	1539
	1540	# PRUEFEN, OB VERZEICHNIS UEBERHAUPT UNTER SVN-KONTROLLE STEHT
	1541	if [[ ! -d .svn ]]
	1542	then
	1543	printf "\n\n +++ source directory"
	1544	printf "\n \"$source_path\" "
	1545	printf "\n is not under control of \"subversion\"."
	1546	printf "\n Please do not use mrun-option \"-s LOCALLY MODIFIED\"\n"
	1547	fi
	1548
	1549
	1550	# ALLE MODIFIZIERTEN QUELLCODEDATEIEN AUFLISTEN
	1551	Filenames=""
[69]	1552	svn status > tmp_mrun
	1553	while read line
[5]	1554	do
	1555	firstc=`echo $line \| cut -c1`
	1556	if [[ $firstc = M \|\| $firstc = "?" ]]
	1557	then
	1558	Name=`echo "$line" \| cut -c8-`
	1559	extension=`echo $Name \| cut -d. -f2`
	1560	if [[ "$extension" = f90 \|\| "$extension" = F90 \|\| "$extension" = f \|\| "$extension" = F \|\| "$extension" = c ]]
	1561	then
	1562	Filenames="$Filenames "$Name
	1563	fi
	1564	fi
[69]	1565	done < tmp_mrun
[5]	1566
	1567
	1568	# DATEIEN NACH SOURCES_FOR_RUN_... KOPIEREN
	1569	for dateiname in $Filenames
	1570	do
	1571	cp $dateiname $working_directory/SOURCES_FOR_RUN_$fname
	1572	source_list=$source_list"$dateiname "
	1573	done
	1574
	1575	cd - > /dev/null
	1576
	1577
[1]	1578	# MITTELS OPTION -s ANGEGEBENE DATEIEN NACH SOURCES_FOR_RUN_... KOPIEREN
	1579	# BEI AUTOMATISCHEN FORTSETZUNGSLAEUFEN SIND DORT SCHON ALLE DATEIEN
	1580	# VORHANDEN
[5]	1581	elif [[ "$source_list" != "" && $restart_run != true ]]
[1]	1582	then
	1583
	1584	cd $source_path
	1585
	1586	for filename in $source_list
	1587	do
	1588
	1589	# QUELLTEXT-DATEI DARF KEINE PFADE BEINHALTEN
	1590	if [[ $(print $filename \| grep -c "/") != 0 ]]
	1591	then
	1592	printf "\n +++ source code file: $filename"
	1593	printf "\n must not contain (\"/\") "
	1594	locat=source; exit
	1595	fi
	1596
	1597	if [[ ! -f $filename ]]
	1598	then
	1599	printf "\n +++ source code file: $filename"
	1600	printf "\n does not exist"
	1601	locat=source; exit
	1602	else
	1603	cp $filename $working_directory/SOURCES_FOR_RUN_$fname
	1604	fi
	1605
	1606	done
	1607
	1608	cd - > /dev/null
	1609
	1610	fi
	1611
	1612
	1613	# PRUEFEN, OB ENTWEDER HAUPTPROGRAMM VORHANDEN UND ES EVTL. IN DER
	1614	# LISTE DER ZU UEBERSETZENDEN PROGRAMMTEILE MIT ENTHALTEN IST (WENN
	1615	# NICHT, WIRD ES DIESER LISTE HINZUGEFUEGT)
[5]	1616	if [[ $restart_run != true ]]
[1]	1617	then
	1618
	1619	if [[ ! -f "$source_path/$mainprog" ]]
	1620	then
	1621	printf "\n\n +++ main program: $mainprog"
	1622	printf "\n does not exist in source directory"
	1623	printf "\n \"$source_path\"\n"
	1624	locat=source; exit
	1625	else
	1626	if [[ $(echo $source_list \| grep -c $mainprog) = 0 ]]
	1627	then
	1628	cp $source_path/$mainprog SOURCES_FOR_RUN_$fname
	1629	source_list=${mainprog}" $source_list"
	1630	fi
	1631	fi
	1632	fi
	1633
	1634
[211]	1635	# MAKEFILE AUF VORHANDENSEIN PRUEFEN UND KOPIEREN
	1636	# BEI RESTART-LAEUFEN LIEGT ES SCHON IM VERZEICHNIS SOURCES_FOR_RUN...
	1637	if [[ "$restart_run" != true ]]
	1638	then
	1639	[[ "$makefile" = "" ]] && makefile=$source_path/Makefile
	1640	if [[ ! -f $makefile ]]
	1641	then
	1642	printf "\n +++ file \"$makefile\" does not exist"
	1643	locat=make; exit
	1644	else
	1645	cp $makefile SOURCES_FOR_RUN_$fname/Makefile
	1646	fi
	1647	fi
	1648
	1649
[1]	1650	# DATEIEN AUS ZUSAETZLICHEM QUELLVERZEICHNIS HINZUFUEGEN
[5]	1651	if [[ $restart_run != true && "$add_source_path" != "" ]]
[1]	1652	then
	1653
	1654	# GIBT ES DAS VERZEICHNIS UEBERHAUPT?
	1655	if [[ ! -d $add_source_path ]]
	1656	then
	1657	printf "\n\n +++ WARNING: additional source code directory"
	1658	printf "\n \"$add_source_path\" "
	1659	printf "\n does not exist or is not a directory."
	1660	printf "\n No source code will be used from this directory!\n"
	1661	add_source_path=""
	1662	sleep 3
	1663	else
	1664
	1665	cd $add_source_path
[211]	1666	found=false
[1]	1667
	1668	Names=$(ls -1 *.f90 2>&1)
	1669	[[ $(echo $Names \| grep -c '*.f90') = 0 ]] && AddFilenames="$Names"
	1670	Names=$(ls -1 *.F90 2>&1)
	1671	[[ $(echo $Names \| grep -c '*.F90') = 0 ]] && AddFilenames="$AddFilenames $Names"
	1672	Names=$(ls -1 *.F 2>&1)
	1673	[[ $(echo $Names \| grep -c '*.F') = 0 ]] && AddFilenames="$AddFilenames $Names"
	1674	Names=$(ls -1 *.f 2>&1)
	1675	[[ $(echo $Names \| grep -c '*.f') = 0 ]] && AddFilenames="$AddFilenames $Names"
	1676	Names=$(ls -1 *.c 2>&1)
	1677	[[ $(echo $Names \| grep -c '*.c') = 0 ]] && AddFilenames="$AddFilenames $Names"
	1678
	1679	cd - > /dev/null
	1680	cd SOURCES_FOR_RUN_$fname
	1681
[211]	1682	# COPY MAKEFILE IF EXISTING
	1683	if [[ -f $add_source_path/Makefile ]]
	1684	then
	1685	printf "\n\n *** user Makefile from directory"
	1686	printf "\n \"$add_source_path\" is used \n"
	1687	sleep 1
	1688	cp $add_source_path/Makefile .
	1689	fi
	1690
[1]	1691	for dateiname in $AddFilenames
	1692	do
	1693	if [[ -f $dateiname ]]
	1694	then
	1695	printf "\n +++ source code file \"$dateiname\" found in additional"
	1696	printf "\n source code directory \"$add_source_path\" "
[211]	1697	printf "\n but was also given with option \"-s\" which means that it should be taken"
	1698	printf "\n from directory \"$source_path\"."
[1]	1699	locat=source; exit
	1700	fi
	1701
	1702	cp $add_source_path/$dateiname .
	1703	source_list="$source_list $dateiname"
	1704
[211]	1705	# CHECK IF FILE IS CONTAINED IN MAKEFILE
	1706	if [[ $(grep -c $dateiname Makefile) = 0 ]]
	1707	then
	1708	printf "\n\n +++ user file \"$dateiname\" "
	1709	printf "\n is not listed in Makefile \n"
	1710	locat=source; exit
	1711	else
	1712
[1]	1713	# Default User-Interface von der Liste entfernen, falls Datei
	1714	# ein User-Interface enthaelt
[211]	1715	# if [[ $( cat $dateiname \| grep -c "END SUBROUTINE user_parin" ) != 0 ]]
	1716	# then
	1717	# if [[ $dateiname != user_interface.f90 && -f user_interface.f90 ]]
	1718	# then
	1719	# rm -rf user_interface.f90
	1720	# source_list=`echo $source_list \| sed -e 's/user_interface.f90//'`
	1721	# printf "\n\n *** default \"user_interface.f90\" removed from the files to be translated"
	1722	# printf "\n since a user-interface is found in file"
	1723	# printf "\n \"$add_source_path/$dateiname\" \n"
	1724	# sleep 3
	1725	# else
	1726	if [[ $found = false ]]
[1]	1727	then
[211]	1728	found=true
	1729	printf "\n\n *** following user file(s) added to the"
	1730	printf " files to be translated:\n "
[1]	1731	fi
[211]	1732	printf "$dateiname "
	1733	sleep 0.5
[1]	1734	fi
	1735	done
[211]	1736	[[ $found = true ]] && printf "\n"
[1]	1737	cd - > /dev/null
	1738	fi
	1739	fi
	1740
	1741
	1742	# ALLE UNTERPROGRAMME, DIE ZU VEREINBARTEN SOFTWAREPAKETEN GEHOEREN,
	1743	# DER LISTE DER ZU UEBERSETZENDEN DATEIEN HINZUFUEGEN
[5]	1744	if [[ $restart_run != true && -n $package_list ]]
[1]	1745	then
	1746
	1747	cd $source_path
	1748
	1749	for package in $package_list
	1750	do
	1751
	1752	[[ $package = "dvrp_graphics+1PE" ]] && package=dvrp_graphics
	1753
	1754	# ERMITTELE ALLE DATEIEN, DIE ZUM PAKET GEHOEREN
	1755	# FEHLERMELDUNGEN WERDEN ABGEFANGEN, DA * AUCH VERZEICHNISSNAMEN
	1756	# LIEFERT
	1757	package_source_list=`grep "defined( __$package " * 2>/dev/null \| cut -f1 -d:`
	1758
	1759
	1760	# FUEGE DIESE DATEIEN DER LISTE DER ZU UEBERSETZENDEN DATEIEN
	1761	# HINZU, FALLS SIE NOCH NICHT DAZUGEHOEREN
	1762	for source_list_name in $package_source_list
	1763	do
	1764	if [[ $(echo $source_list \| grep -c $source_list_name) = 0 ]]
	1765	then
	1766
	1767	# NUR DATEIEN MIT GUELTIGEN ENDUNGEN VERWENDEN
	1768	ending=`echo $source_list_name \| cut -f2 -d.`
	1769	if [[ "$ending" = f90 \|\| "$ending" = F90 \|\| "$ending" = f \|\| "$ending" = F \|\| "$ending" = c ]]
	1770	then
	1771	cp $source_list_name $working_directory/SOURCES_FOR_RUN_$fname
	1772	source_list="$source_list $source_list_name"
	1773	fi
	1774	fi
	1775	done
	1776	done
	1777
	1778	cd - > /dev/null
	1779	fi
	1780
	1781
	1782	# MAKEFILE AUF VORHANDENSEIN PRUEFEN UND KOPIEREN
	1783	# BEI RESTART-LAEUFEN LIEGT ES SCHON IM VERZEICHNIS SOURCES_FOR_RUN...
[211]	1784	# if [[ "$restart_run" != true ]]
	1785	# then
	1786	# [[ "$makefile" = "" ]] && makefile=$source_path/Makefile
	1787	# if [[ ! -f $makefile ]]
	1788	# then
	1789	# printf "\n +++ file \"$makefile\" does not exist"
	1790	# locat=make; exit
	1791	# else
	1792	# cp $makefile SOURCES_FOR_RUN_$fname/Makefile
	1793	# fi
	1794	# fi
[1]	1795
	1796	fi # do_compile=true
	1797
	1798
	1799	# FALLS PROGRAMMTEILE UEBERSETZT WERDEN SOLLEN, FOLGEN JETZT EINIGE
	1800	# UEBERPRUEFUNGEN UND DAS SETZEN DER PRAEPROZESSOR-DIREKTIVEN
	1801	if [[ $do_compile = true ]]
	1802	then
	1803
	1804	# PRAEPROZESSOR-DIREKTIVEN ZUM SELEKTIVEN AUSWAEHLEN VON CODETEILEN
	1805	# ZUSAMMENSETZEN
[83]	1806	# DIREKTIVEN ZUM AKTIVIEREN VON RECHNERSPEZIFISCHEM CODE
[1]	1807	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
	1808	then
[82]	1809	cpp_options="${cpp_options},-D__ibm=__ibm"
[1]	1810	elif [[ $(echo $localhost \| cut -c1-3) = nec ]]
	1811	then
[82]	1812	cpp_options="$cpp_options -D__nec"
	1813	elif [[ $(echo $localhost \| cut -c1-2) = lc ]]
	1814	then
	1815	cpp_options="$cpp_options -D__lc"
[1]	1816	else
[82]	1817	cpp_options="$cpp_options -D__$localhost"
[1]	1818	fi
[83]	1819
	1820	# DIREKTIVEN DIE DURCH OPTION -K BESTIMMT WERDEN (Z.B. PARALLEL)
[1]	1821	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
	1822	then
[82]	1823	[[ -n $cond1 ]] && cpp_options="${cpp_options},-D__$cond1=__$cond1"
	1824	[[ -n $cond2 ]] && cpp_options="${cpp_options},-D__$cond2=__$cond2"
[1]	1825	else
[82]	1826	[[ -n $cond1 ]] && cpp_options="$cpp_options -D__$cond1"
	1827	[[ -n $cond2 ]] && cpp_options="$cpp_options -D__$cond2"
[1]	1828	fi
[83]	1829
	1830	# DIREKTIVEN DIE SOFTWAREPAKETE AKTIVIEREN (OPTION -p)
[1]	1831	if [[ -n $package_list ]]
	1832	then
	1833	for package in $package_list
	1834	do
	1835	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
	1836	then
	1837	if [[ $package != "dvrp_graphics+1PE" ]]
	1838	then
[82]	1839	cpp_options="${cpp_options},-D__$package=__$package"
[1]	1840	else
[82]	1841	cpp_options="${cpp_options},-D__dvrp_graphics=__dvrp_graphics"
[1]	1842	export use_seperate_pe_for_dvrp_output=true
	1843	fi
	1844	else
	1845	if [[ $package != "dvrp_graphics+1PE" ]]
	1846	then
[82]	1847	cpp_options="$cpp_options -D__$package"
[1]	1848	else
[82]	1849	cpp_options="$cpp_options -D__dvrp_graphics"
[1]	1850	export use_seperate_pe_for_dvrp_output=true
	1851	fi
	1852	fi
	1853	done
	1854	fi
[83]	1855
	1856	# DIREKTIVEN DIE DURCH OPTION -D FESTGELEGT SIND
[1]	1857	if [[ -n $cpp_opts ]]
	1858	then
	1859	for popts in $cpp_opts
	1860	do
[82]	1861	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
	1862	then
	1863	cpp_options="${cpp_options},-D__$popts=__$popts"
	1864	else
	1865	cpp_options="$cpp_options -D__$popts"
	1866	fi
[1]	1867	done
	1868	fi
	1869
	1870	else
	1871
	1872
	1873	# BEI LOKALEN RECHNUNGEN PRUEFEN, OB EXECUTABLE VORHANDEN
	1874	if [[ $do_remote = false ]]
	1875	then
	1876	if [[ ! -f $executable ]]
	1877	then
	1878	printf "\n +++ executable file: $executable"
	1879	printf "\n does not exist"
	1880	locat=executable; exit
	1881	fi
	1882	fi
	1883	fi
	1884
	1885
	1886	# JOBMODUS FESTSTELLEN
	1887	if [[ "$ENVIRONMENT" = BATCH && $localhost != lctit \|\| "$QUEUE" != interactive && $localhost = lctit ]]
	1888	then
	1889	jobmo=BATCH
	1890	else
	1891	jobmo=INTERACTIVE
	1892	fi
	1893
	1894
	1895	# HOSTSPEZIFISCHE DEFAULT-COMPILER SETZEN, FALLS NICHT BEREITS
	1896	# DURCH BENUTZER ANDERWEITIG VEREINBART
	1897	if [[ "$compiler_name" = "" ]]
	1898	then
[82]	1899
[220]	1900	printf "\n +++ no compiler specified for \"$host $cond1 $cond2\""
[82]	1901	locat=compiler_name; exit
	1902
[1]	1903	fi
	1904
	1905
[251]	1906	# COMPILER AUF RIAMS NEC UEBERSCHREIBEN
	1907	[[ $localhost = necriam ]] && compiler_name=mpif90
[1]	1908
	1909
	1910
	1911	# TEMPORAEREN KATALOGNAMEN BESTIMMEN
	1912	kennung=$RANDOM
	1913	if [[ "$tmp_user_catalog" = "" ]]
	1914	then
	1915	if [[ $localhost = ibmb \|\| $localhost = ibmh ]]
	1916	then
	1917	tmp_user_catalog=$TMPDIR
	1918	elif [[ $localhost = nech ]]
	1919	then
	1920	tmp_user_catalog=$WRKSHR
	1921	else
	1922	tmp_user_catalog=/tmp
	1923	fi
	1924	fi
	1925	TEMPDIR=$tmp_user_catalog/${usern}.$kennung
	1926
	1927
	1928	# KATALOGNAMEN FUER ZWISCHENSPEICHERUNG VON FORTSETZUNGSLAUFDATEIEN
	1929	# BESTIMMEN
	1930	if [[ "$tmp_data_catalog" = "" ]]
	1931	then
	1932	if [[ $localhost = ibmb \|\| $localhost = ibmh ]]
	1933	then
	1934	tmp_data_catalog=$WORK/mrun_restart_data
	1935	elif [[ $localhost = nech ]]
	1936	then
	1937	tmp_data_catalog=$WRKSHR/mrun_restart_data
	1938	else
	1939	tmp_data_catalog=/tmp/mrun_restart_data
	1940	fi
	1941	fi
	1942
	1943
	1944	# EVENTUELL BEI LOKALEN RECHNUNGEN $-ZEICHEN IN ENVIRONMENT-VARIABLEN
	1945	# ERSETZEN
	1946	if [[ $do_remote = false && $do_compile = true ]]
	1947	then
	1948	eval fopts=\"$fopts\"
	1949	eval lopts=\"$lopts\"
	1950	fi
	1951
	1952
	1953
	1954	# COMPILE- UND LINK-OPTIONEN BESTIMMEN
[82]	1955	fopts="$fopts $netcdf_inc $dvrp_inc"
	1956	lopts="$lopts $netcdf_lib $dvrp_lib"
[1]	1957	ROPTS="$ropts"
[179]	1958	if [[ ( $(echo $host \| cut -c1-3) = nec \|\| $(echo $host \| cut -c1-3) = ibm \|\| $host = lcsgih \|\| $host = lcsgib \|\| $host = lctit \|\| $host = lcfimm \|\| $host = lcxt4 ) && -n $numprocs ]]
[1]	1959	then
	1960	XOPT="-X $numprocs"
	1961	fi
	1962
	1963
	1964
	1965	# PRUEFEN DER CPU-ZEIT. (CPUMAX WIRD ALS ENV-VARIABLE VOM HAUTPRO-
	1966	# GRAMM BENOETIGT
	1967	done=false
	1968	while [[ $done = false ]]
	1969	do
	1970	cputime=$cpumax
	1971	if (( $cputime == 0 ))
	1972	then
[246]	1973	if [[ $do_batch = true ]]
	1974	then
	1975	printf "\n +++ cpu-time is undefined"
	1976	printf "\n >>> Please type CPU-time in seconds as INTEGER:"
	1977	printf "\n >>> "
	1978	read cputime 1>/dev/null 2>&1
	1979	else
	1980	cputime=10000000 # NO CPU LIMIT FOR INTERACTIVE RUNS
	1981	fi
[1]	1982	else
	1983	done=true
	1984	fi
	1985	cpumax=$cputime
	1986	done
	1987
	1988	(( minuten = cputime / 60 ))
	1989	(( sekunden = cputime - minuten * 60 ))
	1990
	1991
	1992	# PRUEFEN DER KERNSPEICHERANFORDERUNG
	1993	if [[ $do_batch = true ]]
	1994	then
	1995	done=false
	1996	while [[ $done = false ]]
	1997	do
	1998	if (( memory == 0 ))
	1999	then
	2000	printf "\n +++ memory demand is undefined"
	2001	printf "\n >>> Please type memory in MByte per process as INTEGER:"
	2002	printf "\n >>> "
	2003	read memory 1>/dev/null 2>&1
	2004	else
	2005	done=true
	2006	fi
	2007	done
	2008	fi
	2009
	2010
	2011	# PRUEFEN, OB FUER REMOTE-RECHNUNGEN EIN BENUTZERNAME ANGEGEBEN WURDE
	2012	if [[ $do_remote = true && -z $remote_username ]]
	2013	then
	2014	while [[ -z $remote_username ]]
	2015	do
	2016	printf "\n +++ username on remote host \"$host\" is undefined"
	2017	printf "\n >>> Please type username:"
	2018	printf "\n >>> "
	2019	read remote_username
	2020	done
	2021	mc="$mc -u$remote_username"
	2022	fi
	2023
[221]	2024
	2025	# SET DEFAULT VALUE FOR MPI MODULE TO BE USED ON SGI-ALTIX
	2026	if [[ $host = lcsgib \|\| $host = lcsgih ]]
	2027	then
	2028	[[ "$mpilib" = "" ]] && export mpilib=mpt
	2029	fi
	2030
	2031
	2032
[1]	2033	###########################################################################
	2034	# HEADER-AUSGABE
	2035	###########################################################################
	2036
	2037
	2038	calltime=$(date)
	2039	printf "\n"
	2040	# [[ $silent = false ]] && clear
	2041	printf "#--------------------------------------------------------------# \n"
	2042	printf "\| $version$calltime \| \n"
	2043	printf "\| \| \n"
	2044	spalte1="called on:"; spalte2=$localhost_realname
	2045	printf "\| $spalte1$spalte2 \| \n"
	2046	if [[ $local_compile = false ]]
	2047	then
	2048	if [[ $do_remote = true ]]
	2049	then
	2050	spalte1="execution on:"; spalte2="$host (username: $remote_username)"
	2051	else
	2052	spalte1="execution on:"; spalte2="$host ($localhost_realname)"
	2053	fi
	2054	else
	2055	spalte1="compiling test only!"; spalte2=""
	2056	fi
	2057	printf "\| $spalte1$spalte2 \| \n"
	2058	if [[ -n $numprocs ]]
	2059	then
	2060	spalte1="number of PEs:"; spalte2=$numprocs
	2061	printf "\| $spalte1$spalte2 \| \n"
	2062	fi
	2063	if [[ -n $tasks_per_node ]]
	2064	then
	2065	spalte1="tasks per node:"; spalte2="$tasks_per_node (number of nodes: $nodes)"
	2066	printf "\| $spalte1$spalte2 \| \n"
	2067	fi
	2068	if [[ $threads_per_task != 1 ]]
	2069	then
	2070	spalte1="threads per task:"; spalte2="$threads_per_task"
	2071	printf "\| $spalte1$spalte2 \| \n"
	2072	fi
	2073	printf "\| \| \n"
	2074	if [[ $do_compile = true ]]
	2075	then
[82]	2076	spalte1=cpp-directives:; spalte2=$cpp_options
[1]	2077	printf "\| $spalte1$spalte2 \| \n"
[82]	2078	zeile=$(echo "$cpp_options" \| cut -c41-)
[1]	2079	while [[ "$zeile" != "" ]]
	2080	do
	2081	spalte1=""
	2082	spalte2=$zeile
	2083	printf "\| $spalte1$spalte2 \| \n"
	2084	zeile=$(echo "$zeile" \| cut -c41-)
	2085	done
	2086
[82]	2087	spalte1=compiler-options:; spalte2="$fopts"
[1]	2088	printf "\| $spalte1$spalte2 \| \n"
[82]	2089	zeile=$(echo "$fopts" \| cut -c41-)
[1]	2090	while [[ "$zeile" != "" ]]
	2091	do
	2092	spalte1=""
	2093	spalte2=$zeile
	2094	printf "\| $spalte1$spalte2 \| \n"
	2095	zeile=$(echo "$zeile" \| cut -c41-)
	2096	done
	2097
[82]	2098	spalte1=linker-options:; spalte2=$lopts
[1]	2099	printf "\| $spalte1$spalte2 \| \n"
[82]	2100	zeile=$(echo "$lopts" \| cut -c41-)
[1]	2101	while [[ "$zeile" != "" ]]
	2102	do
	2103	spalte1=""
	2104	spalte2=$zeile
	2105	printf "\| $spalte1$spalte2 \| \n"
	2106	zeile=$(echo "$zeile" \| cut -c41-)
	2107	done
	2108
	2109	spalte1="main program":; spalte2=$mainprog
	2110	printf "\| $spalte1$spalte2 \| \n"
	2111	else
	2112	spalte1=executable:; spalte2=$executable
	2113	printf "\| $spalte1$spalte2 \| \n"
	2114	fi
	2115	printf "\| \| \n"
	2116	spalte1="base name of files":; spalte2=$fname
	2117	printf "\| $spalte1$spalte2 \| \n"
	2118	if [[ $fname != $afname ]]
	2119	then
	2120	spalte1="base name of input files":; spalte2=$afname
	2121	printf "\| $spalte1$spalte2 \| \n"
	2122	fi
	2123	spalte1="INPUT control list":; spalte2=$input_list
	2124	printf "\| $spalte1$spalte2 \| \n"
	2125	spalte1="OUTPUT control list":; spalte2=$output_list
	2126	printf "\| $spalte1$spalte2 \| \n"
	2127
	2128	if [[ $do_batch = true \|\| "$LOADLBATCH" = yes ]]
	2129	then
	2130	spalte1="memory demand / PE":; spalte2="$memory MB"
	2131	printf "\| $spalte1$spalte2 \| \n"
	2132	spalte1=CPU-time:; spalte2="$minuten:$sekunden"
	2133	printf "\| $spalte1$spalte2 \| \n"
	2134	fi
	2135
	2136	if [[ $do_compile = true ]]
	2137	then
	2138	printf "\| \| \n"
	2139	printf "\| Files to be compiled: \| \n"
	2140	zeile=$source_list
	2141	while [[ "$zeile" != "" ]]
	2142	do
	2143	spalte3=$zeile
	2144	printf "\| $spalte3 \| \n"
	2145	zeile=$(echo "$zeile" \| cut -c61-)
	2146	done
	2147	fi
	2148	printf "#--------------------------------------------------------------#"
	2149
	2150
	2151
	2152	# BEDINGTE AUSGABE DER DATEIVERBINDUNGEN
	2153	if [[ $do_trace = true ]]
	2154	then
	2155	(( i = 0 ))
	2156	while (( i < iin ))
	2157	do
	2158	(( i = i + 1 ))
	2159	if (( i == 1 ))
	2160	then
	2161	printf "\n\n >>> INPUT-file assignments:\n"
	2162	fi
	2163	printf "\n ${localin[$i]} : ${absnamein[$i]}"
	2164	done
	2165	(( i = 0 ))
	2166	while (( i < iout ))
	2167	do
	2168	(( i = i + 1 ))
	2169	if (( i == 1 ))
	2170	then
	2171	printf "\n\n >>> OUTPUT-file assignments:\n"
	2172	fi
	2173	printf "\n ${localout[$i]} : ${pathout[$i]}"
	2174	done
	2175	(( i = 0 ))
	2176	while (( i < iic ))
	2177	do
	2178	(( i = i + 1 ))
	2179	if (( i == 1 ))
	2180	then
	2181	printf "\n\n >>> INPUT-commands:\n"
	2182	fi
	2183	printf "\n ${in_command[$i]}"
	2184	done
	2185	(( i = 0 ))
	2186	while (( i < ioc ))
	2187	do
	2188	(( i = i + 1 ))
	2189	if (( i == 1 ))
	2190	then
	2191	printf "\n\n >>> OUTPUT-commands:\n"
	2192	fi
	2193	printf "\n ${out_command[$i]}"
	2194	done
	2195	fi
	2196
	2197
	2198	# ABFRAGEN BEI AUFRUF AUF LOKALER MASCHINE
	2199	if [[ $remotecall = false && $silent = false && $jobmo != BATCH ]]
	2200	then
	2201	antwort=dummy
	2202	printf "\n\n"
	2203	while [[ "$antwort" != y && "$antwort" != Y && "$antwort" != n && "$antwort" != N ]]
	2204	do
	2205	printf " >>> everything o.k. (y/n) ? "
	2206	read antwort
	2207	done
	2208	if [[ $antwort = n \|\| $antwort = N ]]
	2209	then
	2210	locat=user_abort; (( iec = 0 )); exit
	2211	fi
	2212	if [[ $do_batch = true ]]
	2213	then
	2214	printf " >>> batch-job will be created and submitted"
	2215	else
	2216	if [[ $local_compile = false ]]
	2217	then
	2218	printf " >>> MRUN will now continue to execute on this machine"
	2219	else
	2220	printf " >>> a test compilation will now be carried out on this machine"
	2221	fi
	2222	fi
	2223	fi
	2224
	2225
	2226
	2227
	2228	# FALLS AUF DIESER MASCHINE GERECHNET WERDEN SOLL, WERDEN JETZT ENTSPRE-
	2229	# CHENDE AKTIONEN DURCHGEFUEHRT
	2230	if [[ $do_batch = false ]]
	2231	then
	2232
	2233
	2234	# TEMPORAEREN KATALOG ERZEUGEN
	2235	mkdir -p $TEMPDIR
	2236	chmod go+rx $TEMPDIR
	2237	tmpcreate=true
	2238
	2239
	2240	# SAEMTLICHE QUELLTEXT-DATEIEN BZW. AUSFUEHRBARES PROGRAMM IN
	2241	# TEMPORAERES VERZEICHNIS KOPIEREN
	2242	if [[ $do_compile = true ]]
	2243	then
	2244
	2245	# ON NEC, COMPILATION IS DONE ON HOST CROSS VIA CROSS COMPILING
	2246	# CREATE A TEMPORARY DIRECTORY ON THAT MACHINE (HOME MOUNTED VIA NFS)
	2247	if [[ $localhost = nech ]]
	2248	then
	2249	TEMPDIR_COMPILE=$HOME/work/${usern}.$kennung
	2250	if mkdir -p $TEMPDIR_COMPILE
	2251	then
	2252	printf "\n *** \"$TEMPDIR_COMPILE\" "
	2253	printf "\n is generated as temporary directory for cross compiling\n"
	2254	else
	2255	printf "\n +++ creating directory \"$TEMPDIR_COMPILE\" "
	2256	printf "\n needed for cross compilation failed"
	2257	locat=compile
	2258	exit
	2259	fi
	2260	else
	2261	TEMPDIR_COMPILE=$TEMPDIR
	2262	fi
	2263
	2264
[82]	2265	# PFADNAMEN FUER DAS MAKE-DEPOSITORY ERMITTELN
	2266	line=""
	2267	grep "%depository_path" $config_file > tmp_mrun
	2268	while read line
	2269	do
	2270	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
	2271	then
	2272	if [[ "$(echo $line \| cut -d" " -s -f3)" = "" ]]
[1]	2273	then
[82]	2274	global_depository_path=`echo $line \| cut -d" " -s -f2`
[1]	2275	fi
[82]	2276	fi
	2277	done < tmp_mrun
[1]	2278
[82]	2279	line=""
	2280	grep " $localhost" $config_file \| grep "%depository_path" > tmp_mrun
	2281	while read line
	2282	do
	2283	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
[1]	2284	then
[211]	2285	if [[ "$(echo $line \| cut -d" " -s -f4)" = "$cond1" && "$(echo $line \| cut -d" " -s -f5)" = "$cond2" ]]
	2286	then
	2287	local_depository_path=`echo $line \| cut -d" " -s -f2`
	2288	fi
[1]	2289	fi
[82]	2290	done < tmp_mrun
[1]	2291
[82]	2292	if [[ "$local_depository_path" = "" ]]
	2293	then
	2294	if [[ "$global_depository_path" != "" ]]
[1]	2295	then
[82]	2296	local_depository_path=$global_depository_path
[1]	2297	else
[82]	2298	printf "\n\n +++ no depository path found in configuration file"
	2299	printf "\n for local host \"$localhost\" "
	2300	printf "\n please set \"\%depository_path\" in configuration file\n"
	2301	locat=config_file; exit
[1]	2302	fi
[82]	2303	fi
	2304	eval local_depository_path=$local_depository_path
[215]	2305	[[ "$cond1" != "" ]] && local_depository_path=${local_depository_path}_$cond1
	2306	[[ "$cond2" != "" ]] && local_depository_path=${local_depository_path}_$cond2
[1]	2307
[215]	2308
[82]	2309	basename=`print $mainprog \| cut -f1 -d"."`
	2310	eval make_depository=${local_depository_path}/${basename}_current_version.tar
	2311	if [[ ! -f $make_depository ]]
	2312	then
	2313	printf "\n"
	2314	printf "\n *** WARNING: make depository \"$make_depository\" not found"
	2315	printf "\n \"make\" will fail, if the Makefile or other source files are missing\n"
	2316	else
	2317	cp $make_depository $TEMPDIR_COMPILE
[1]	2318	cd $TEMPDIR_COMPILE
[82]	2319	tar -xf $make_depository > /dev/null 2>&1
[1]	2320	cd - > /dev/null
	2321	fi
[82]	2322
	2323	cp SOURCES_FOR_RUN_$fname/* $TEMPDIR_COMPILE
	2324
	2325	# FALLS USER-INTERFACE VORHANDEN UND AUF DATEI MIT ANDEREM NAMEN
	2326	# ALS user_interface.f90 LIEGT, DIESEN GEAENDERTEN NAMEN INS
	2327	# MAKEFILE EINTRAGEN
[211]	2328	# cd $TEMPDIR_COMPILE
	2329	# interface_file=`grep -l "END SUBROUTINE user_parin" $source_list`
	2330	# if [[ "$interface_file" != "" ]]
	2331	# then
	2332	# interface_file=`echo $interface_file \| cut -d"." -f1`
	2333	# mv Makefile Makefile_old
	2334	# sed "s/user_interface/$interface_file/g" Makefile_old > Makefile
	2335	# fi
	2336	# cd - > /dev/null
[1]	2337	else
	2338	cp $executable ${TEMPDIR}/a.out
	2339	fi
	2340
	2341
	2342	# WECHSEL IN TEMPORAEREN KATALOG
	2343	cd $TEMPDIR
	2344	printf "\n *** changed to temporary directory: $TEMPDIR"
	2345
	2346
	2347	# OUTPUT-DATEI-VERBINDUNGEN AUF TEMPORAERER DATEI ABLEGEN
	2348	# DIESE DATEI KANN VON SPAETER AUFZURUFENDEN BENUTZERPROZEDUREN GELESEN
	2349	# WERDEN, UM ZU LOKALEN DATEINAMEN GEHOERENDE PERMANENTE NAMEN ZU
	2350	# ERMITTELN
	2351	(( i = 0 ))
	2352	while (( i < iout ))
	2353	do
	2354	(( i = i + 1 ))
	2355	if [[ "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = tra \|\| "${actionout[$i]}" = trpe ]]
	2356	then
	2357	printf "${localout[$i]} ${actionout[$i]}\n${pathout[$i]}\n${localhost}_${fname}${endout[$i]}\n" >> OUTPUT_FILE_CONNECTIONS
	2358	else
	2359	printf "${localout[$i]} ${actionout[$i]}\n${pathout[$i]}\n${frelout[$i]}\n" >> OUTPUT_FILE_CONNECTIONS
	2360	fi
	2361	done
	2362
	2363
	2364	# EVTL. UEBERSETZUNGSAKTIONEN STARTEN
	2365	if [[ $do_compile = true ]]
	2366	then
	2367
	2368
	2369	# COMPILING WITH MAKE (ON NEC COMPILER IS CALLED ON HOST CROSS)
[82]	2370	printf "\n\n\n *** compilation starts \n$striche\n"
	2371	printf " *** compilation with make using following options:\n"
[211]	2372	printf " make depository: $make_depository"
[82]	2373	printf " compilername: $compiler_name\n"
	2374	printf " options: $fopts\n"
	2375	printf " preprocessor-directives: $cpp_options \n"
	2376	printf " linker-options: $lopts \n"
	2377	printf " source code files: $source_list \n"
	2378
	2379	if [[ $localhost = nech ]]
[1]	2380	then
[82]	2381	ssh 136.172.44.192 -l $usern ". /SX/opt/etc/initsx.sh; cd \$HOME/work/${usern}.$kennung; sxmake -f Makefile PROG=a.out F90=$compiler_name COPT=\"$cpp_options\" F90FLAGS=\"$fopts\" LDFLAGS=\"$lopts\" "
	2382	cp $TEMPDIR_COMPILE/a.out .
	2383	[[ $? != 0 ]] && compile_error=true
	2384	rm -rf $TEMPDIR_COMPILE
[197]	2385	elif [[ $localhost = lcsgib ]]
	2386	then
[221]	2387	printf " compiler is called via ssh on \"bicegate\" using module \"$mpilib\" \n"
	2388	ssh 130.73.232.102 -l $usern ". /usr/share/modules/init/bash; module load $mpilib; cd $TEMPDIR; make -f Makefile PROG=a.out F90=$compiler_name COPT=\"$cpp_options\" F90FLAGS=\"$fopts\" LDFLAGS=\"$lopts\" "
[197]	2389	[[ ! -f a.out ]] && compile_error=true
	2390	continue # ANDERENFALLS IST STATUS=1, FALLS A.OUT VORHANDEN
	2391	elif [[ $localhost = lcsgih ]]
	2392	then
[221]	2393	printf " compiler is called via ssh on \"hicegate2\" using module \"$mpilib\" \n"
	2394	ssh 130.75.4.103 -l $usern ". /usr/share/modules/init/bash; module load $mpilib; cd $TEMPDIR; make -f Makefile PROG=a.out F90=$compiler_name COPT=\"$cpp_options\" F90FLAGS=\"$fopts\" LDFLAGS=\"$lopts\" 2>&1 "
[197]	2395	[[ ! -f a.out ]] && compile_error=true
	2396	continue # ANDERENFALLS IST STATUS=1, FALLS A.OUT VORHANDEN
[1]	2397	else
[118]	2398	[[ $localhost = lctit ]] && export LM_LICENSE_FILE=27050@tggls
[82]	2399	make -f Makefile PROG=a.out F90=$compiler_name COPT="$cpp_options" F90FLAGS="$fopts" LDFLAGS="$lopts"
	2400	fi
[1]	2401
	2402	if [[ $? != 0 \|\| "$compile_error" = true \|\| "$module_compile_error" = true ]]
	2403	then
	2404	printf "\n +++ error occured while compiling or linking"
	2405	locat=compile
[181]	2406
[182]	2407	# WORKAROUND: REMOVE IF CONSTRUCT LATER, BUT KEEP THE EXIT!
[197]	2408	# if [[ $localhost != lcsgib && $localhost != lcsgih ]]
	2409	# then
[181]	2410	exit
[197]	2411	# else
	2412	# locat=normal
	2413	# fi
[1]	2414	else
	2415	printf "$striche\n *** compilation finished \n"
	2416	fi
	2417	fi
	2418
	2419
	2420	# FALLS NUR TESTWEISE KOMPILIERT WERDEN SOLLTE, IST MRUN JETZT FERTIG
	2421	if [[ $local_compile = true ]]
	2422	then
	2423	cd $HOME
	2424	rm -rf $TEMPDIR
	2425	locat=local_compile; exit
	2426	fi
	2427
	2428
	2429	# BEREITSTELLEN DER INPUT-DATEIEN
	2430	# SCHLEIFE UEBER ALLE VOM BENUTZER ANGEGEBENEN DATEIEN
	2431	(( i = 0 ))
	2432	while (( i < iin ))
	2433	do
	2434	(( i = i + 1 ))
	2435	if (( i == 1 ))
	2436	then
	2437	printf "\n\n *** providing INPUT-files:\n$striche"
	2438	fi
	2439
	2440
	2441	# OPTIONALE DATEIEN BEI NICHTVORHANDENSEIN UEBERGEHEN
	2442	if [[ "${transin[$i]}" = unavailable ]]
	2443	then
	2444	if [[ "${extin[$i]}" = "" \|\| "${extin[$i]}" = " " ]]
	2445	then
	2446	printf "\n +++ WARNING: input file \"${pathin[$i]}/${afname}${endin[$i]}\" "
	2447	printf "\n is not available!"
	2448	else
	2449	printf "\n +++ WARNING: input file \"${pathin[$i]}/${afname}${endin[$i]}.${extin[$i]}\" "
	2450	printf "\n is not available!"
	2451	fi
	2452	continue
	2453	fi
	2454
	2455	# PRUEFEN, OB EINZELDATEI ODER DATEI PRO PROZESSOR
	2456	files_for_pes=false; datentyp=file
	2457	if [[ "${actionin[$i]}" = pe && -n $numprocs ]]
	2458	then
	2459	files_for_pes=true; datentyp=directory
	2460	actionin[$i]=""
	2461	elif [[ "${actionin[$i]}" = pe && ! -n $numprocs ]]
	2462	then
	2463	actionin[$i]=""
	2464	elif [[ "${actionin[$i]}" = arpe && -n $numprocs ]]
	2465	then
	2466	files_for_pes=true; datentyp=directory
	2467	actionin[$i]="ar"
	2468	elif [[ "${actionin[$i]}" = arpe && ! -n $numprocs ]]
	2469	then
	2470	actionin[$i]="ar"
	2471	elif [[ "${actionin[$i]}" = flpe && -n $numprocs ]]
	2472	then
	2473	files_for_pes=true; datentyp=directory
	2474	actionin[$i]="fl"
	2475	elif [[ "${actionin[$i]}" = flpe && ! -n $numprocs ]]
	2476	then
	2477	actionin[$i]="fl"
	2478	fi
	2479
	2480	if [[ $files_for_pes = true ]]
	2481	then
	2482	printf "\n >>> INPUT: ${absnamein[$i]}/.... to ${localin[$i]}"
	2483	else
	2484	printf "\n >>> INPUT: ${absnamein[$i]} to ${localin[$i]}"
	2485	fi
	2486
	2487	# INPUT-DATEI FUER EINEN FORTSETZUNGSLAUF. ES WIRD GEPRUEFT,
	2488	# OB DIESE DATEI NOCH AUF DEM TEMPORAEREN DATENKATALOG VORHANDEN
	2489	# IST. FALLS NICHT, WIRD VERSUCHT, SIE ANSCHLIESSEND VOM ARCHIV-
	2490	# SERVER ZU HOLEN
	2491	if [[ "${actionin[$i]}" = fl ]]
	2492	then
	2493	printf "\n $datentyp will be fetched from temporary directory \"${tmp_data_catalog}\" !"
	2494	if [[ $files_for_pes = false ]]
	2495	then
	2496	if [[ -f "$tmp_data_catalog/${frelin[$i]}" ]]
	2497	then
	2498	ln $tmp_data_catalog/${frelin[$i]} ${localin[$i]}
	2499	got_tmp[$i]=true
	2500	elif [[ -f "$WORK/${frelin[$i]}" && $ignore_archive_error = true ]]
	2501	then
	2502	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" !"
	2503	printf "\n *** trying to use backup copy in \"$WORK\" "
	2504	cp $WORK/${frelin[$i]} ${localin[$i]}
	2505	else
	2506	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" "
	2507	printf "\n or \"$tmp_data_catalog\" does not exist!"
	2508	printf "\n *** trying to get copy from archive"
	2509	actionin[$i]=ar
	2510	fi
	2511	else
	2512	if [[ -d "$tmp_data_catalog/${frelin[$i]}" ]]
	2513	then
	2514	mkdir ${localin[$i]}
[149]	2515	cd $tmp_data_catalog/${frelin[$i]}
	2516	for file in $(ls *)
	2517	do
	2518	ln $file $TEMPDIR/${localin[$i]}
	2519	done
	2520	cd $TEMPDIR
[1]	2521	got_tmp[$i]=true
	2522	elif [[ -d "$WORK/${frelin[$i]}" && $ignore_archive_error = true ]]
	2523	then
	2524	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" !"
	2525	printf "\n *** trying to use backup copy in \"$WORK\" "
	2526	cp -r $WORK/${frelin[$i]} ${localin[$i]}
	2527	else
	2528	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" "
	2529	printf "\n or \"$tmp_data_catalog\" does not exist!"
	2530	printf "\n *** trying to get copy from archive"
	2531	actionin[$i]=ar
	2532	fi
	2533	fi
	2534	fi
	2535
	2536
	2537	# DATEI LIEGT AUF ARCHIV-SERVER
	2538	if [[ "${actionin[$i]}" = ar ]]
	2539	then
	2540
	2541	if [[ $files_for_pes = false ]]
	2542	then
	2543	printf "\n file will be restored from archive-system ($archive_system)!"
	2544	else
	2545	printf "\n directory will be restored from archive-system ($archive_system)!"
	2546	fi
	2547
	2548	file_restored=false
	2549
	2550	if [[ $archive_system = asterix ]]
	2551	then
	2552	do_stagein=true
	2553	(( stagein_anz = 0 ))
	2554	while [[ $do_stagein = true ]]
	2555	do
	2556	if [[ $files_for_pes = false ]]
	2557	then
	2558	stagein -O ${frelin[$i]} > STAGEIN_OUTPUT
	2559	else
	2560	stagein -t -O ${frelin[$i]} > STAGEIN_OUTPUT
	2561	fi
	2562	cat STAGEIN_OUTPUT
	2563	if [[ $(grep -c "st.msg:i24" STAGEIN_OUTPUT) != 0 ]]
	2564	then
	2565	file_restored=true
	2566	do_stagein=false
	2567	else
	2568	(( stagein_anz = stagein_anz + 1 ))
	2569	if (( stagein_anz == 10 ))
	2570	then
	2571	printf "\n +++ stagein stoped after 10 tries"
	2572	locat=stage
	2573	exit
	2574	fi
	2575	printf "\n +++ restoring from archive failed, trying again:"
	2576	sleep 900
	2577	fi
	2578	done
	2579	elif [[ $archive_system = DMF ]]
	2580	then
	2581	if [[ $files_for_pes = false ]]
	2582	then
	2583	printf "\n +++ restoring of single files impossible with $archive_system !\n"
	2584	locat=DMF
	2585	exit
	2586	else
	2587	find $ARCHIVE/${frelin[$i]} -type m -print \| dmget
	2588	cp -r $ARCHIVE/${frelin[$i]} $PWD
	2589	file_restored=true
	2590	fi
	2591	elif [[ $archive_system = tivoli ]]
	2592	then
	2593	if [[ $files_for_pes = false ]]
	2594	then
	2595	if [[ $localhost = ibmh ]]
	2596	then
	2597	ssh $usern@hdata.hlrn.de "cp $PERM/${frelin[$i]} $PWD"
	2598	else
	2599	ssh $usern@bdata.hlrn.de "cp $PERM/${frelin[$i]} $PWD"
	2600	fi
	2601	else
	2602	(( inode = 0 ))
	2603	while (( inode < nodes ))
	2604	do
	2605	if [[ $localhost = ibmh ]]
	2606	then
	2607	ssh $usern@hdata.hlrn.de "cd $PWD; tar xf $PERM/${frelin[$i]}/${frelin[$i]}.node_$inode.tar"
	2608	else
	2609	ssh $usern@bdata.hlrn.de "cd $PWD; tar xf $PERM/${frelin[$i]}/${frelin[$i]}.node_$inode.tar"
	2610	fi
	2611	(( inode = inode + 1 ))
	2612	done
	2613	fi
	2614	file_restored=true
	2615	elif [[ $archive_system = ut ]]
	2616	then
	2617	if [[ $files_for_pes = false ]]
	2618	then
	2619	cp $UT/${frelin[$i]} .
	2620	else
	2621	(( inode = 0 ))
	2622	while (( inode < nodes ))
	2623	do
	2624	tar xf $UT/${frelin[$i]}/${frelin[$i]}.node_$inode.tar
	2625	(( inode = inode + 1 ))
	2626	done
	2627	fi
	2628	file_restored=true
	2629	else
	2630	printf "\n +++ archive_system=\"$archive_system\" restore impossible!"
	2631	locat=rearchive
	2632	exit
	2633	fi
	2634
	2635	if [[ $file_restored = true ]]
	2636	then
	2637
	2638	# DATEI AUCH AUF TEMPORAERES DATENVERZEICHNIS LEGEN, DAMIT
	2639	# SIE BEI WEITEREN ZUGRIFFEN NOCH VORHANDEN IST
	2640	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog; chmod g+rx $tmp_data_catalog
	2641	if [[ $files_for_pes = false ]]
	2642	then
	2643	ln -f ${frelin[$i]} $tmp_data_catalog/${frelin[$i]}
	2644	else
	2645	mkdir $tmp_data_catalog/${frelin[$i]}
	2646	ln -f ${frelin[$i]}/* $tmp_data_catalog/${frelin[$i]}
	2647	fi
	2648	got_tmp[$i]=true
	2649
	2650	# DATEI UNTER LOKALEM NAMEN ZUR VERFUEGUNG STELLEN
	2651	mv ${frelin[$i]} ${localin[$i]}
	2652
	2653	fi
	2654	fi
	2655
	2656
	2657	# DATEI LIEGT IM VOM BENUTZER ANGEGEBENEN VERZEICHNIS
	2658	if [[ "${actionin[$i]}" = "" \|\| "${actionin[$i]}" = "di" \|\| "${actionin[$i]}" = "npe" ]]
	2659	then
	2660
	2661	if [[ "${actionin[$i]}" = "npe" && -n $numprocs ]]
	2662	then
	2663
	2664	# DATEI WIRD FUER DIE PROZESSOREN EINES PARALLERECHNERS BEREITGESTELLT
	2665	printf "\n file will be provided for $numprocs processors"
	2666	mkdir ${localin[$i]}
	2667	ival=$numprocs
	2668	(( ii = 0 ))
	2669	while (( ii <= ival-1 ))
	2670	do
	2671	if (( ii < 10 ))
	2672	then
	2673	cp ${absnamein[$i]} ${localin[$i]}/_000$ii
	2674	elif (( ii < 100 ))
	2675	then
	2676	cp ${absnamein[$i]} ${localin[$i]}/_00$ii
	2677	elif (( ii < 1000 ))
	2678	then
	2679	cp ${absnamein[$i]} ${localin[$i]}/_0$ii
	2680	else
	2681	cp ${absnamein[$i]} ${localin[$i]}/_$ii
	2682	fi
	2683	(( ii = ii + 1 ))
	2684	done
	2685
	2686	else
	2687
	2688	if [[ $files_for_pes = true ]]
	2689	then
	2690
	2691	# DIE DEN PROZESSOREN EINES PARALLELRECHNERS ZUGEHOERIGEN
	2692	# DATEIEN WERDEN BEREITGESTELLT, INDEM ZUERST DER GESAMTE
	2693	# KATALOGINHALT KOPIERT UND DANN DIE EINZELNEN DATEIEN
	2694	# PER MOVE UMBENANNT WERDEN
	2695	printf "\n providing $numprocs files for the respective processors"
	2696	mkdir ${localin[$i]}
[183]	2697	if [[ $link_local_input = true ]]
	2698	then
	2699	printf " using ln -f\n"
	2700	cd ${absnamein[$i]}
	2701	for file in $(ls *)
	2702	do
	2703	ln -f $file ${localin[$i]}
	2704	done
	2705	cd $TEMPDIR
	2706	fi
	2707	# If "ln -f" fails of if "$link_local_input = false" do a normal "cp -r"
	2708	if [[ ! -f "${localin[$i]}/_0000" ]]
	2709	then
	2710	if [[ $link_local_input = true ]]
	2711	then
	2712	printf " ln failed for .../_0000, using cp...\n"
	2713	fi
	2714	cp -r ${absnamein[$i]}/* ${localin[$i]}
	2715	fi
[1]	2716
	2717	else
	2718	# BEREITSTELLUNG AUF EINPROZESSORRECHNERN
[183]	2719	if [[ $link_local_input = true ]]
	2720	then
	2721	printf " using ln -f\n"
	2722	ln -f ${absnamein[$i]} ${localin[$i]}
	2723	fi
	2724	# If "ln -f" fails of if "$link_local_input = false" do a normal "cp"
	2725	if [[ ! -f "${localin[$i]}" ]]
	2726	then
	2727	if [[ $link_local_input = true ]]
	2728	then
	2729	printf " ln failed, using cp...\n"
	2730	fi
	2731	cp ${absnamein[$i]} ${localin[$i]}
	2732	fi
[1]	2733	fi
	2734	fi
	2735	fi
	2736
	2737	done
	2738	if (( i != 0 ))
	2739	then
	2740	printf "\n$striche\n *** all INPUT-files provided \n"
	2741	fi
	2742
	2743
	2744	# NAMELIST-DATEI MIT WERTEN VON ENVIRONMENT-VARIABLEN ERZEUGEN (ZU
	2745	# LESEN VON PALM)
	2746	cat > ENVPAR << %%END%%
	2747	&envpar run_identifier = '$fname', host = '$localhost',
	2748	write_binary = '$write_binary', tasks_per_node = $tasks_per_node,
[75]	2749	maximum_cpu_time_allowed = ${cpumax}.,
	2750	revision = '$global_revision' /
[1]	2751
	2752	%%END%%
	2753
	2754
	2755	# EVENTUELLE INPUT-KOMMANDOS ABARBEITEN
	2756	(( i = 0 ))
	2757	while (( i < iic ))
	2758	do
	2759	(( i = i + 1 ))
	2760	if (( i == 1 ))
	2761	then
	2762	printf "\n\n *** execution of INPUT-commands:\n$striche"
	2763	fi
	2764	printf "\n >>> ${in_command[$i]}"
	2765	eval ${in_command[$i]}
	2766	if (( i == iic ))
	2767	then
	2768	printf "\n$striche\n"
	2769	fi
	2770	done
	2771
	2772
	2773	# VERBLEIBENDE CPU-ZEIT BERECHNEN
	2774	cpurest=${cpumax}.
	2775
	2776
	2777	# PROGRAMMSTART
	2778	printf "\n\n *** execution starts in directory\n \"`pwd`\"\n$striche\n"
	2779	PATH=$PATH:$TEMPDIR
	2780
	2781	if [[ "$cond1" = debug \|\| "$cond2" = debug ]]
	2782	then
	2783	if [[ "$ENVIRONMENT" = BATCH ]]
	2784	then
[211]	2785	if [[ $(echo $localhost \| cut -c1-5) != lcsgi ]]
	2786	then
	2787	printf "\n +++ debug is allowed in interactive mode only"
	2788	locat=debug
	2789	exit
	2790	fi
[1]	2791	fi
[5]	2792	if [[ $localhost = decalpha ]]
[1]	2793	then
	2794	dxladebug a.out
	2795	elif [[ $localhost = ibmb \|\| $localhost = ibmh ]]
	2796	then
	2797
	2798	# SETUP THE IBM MPI ENVIRONMENT
	2799	export MP_SHARED_MEMORY=yes
	2800	export AIXTHREADS_SCOPE=S
	2801	export OMP_NUM_THREADS=$threads_per_task
	2802	export AUTHSTATE=files
	2803	export XLFRTEOPTS="nlwidth=132:err_recovery=no" # RECORD-LENGTH OF NAMELIST-OUTPUT
	2804
	2805	# FOLLOWING OPTIONS ARE MANDATORY FOR TOTALVIEW
	2806	export MP_ADAPTER_USE=shared
	2807	export MP_CPU_USE=multiple
	2808	export MP_TIMEOUT=1200
	2809
	2810	unset MP_TASK_AFFINITY
	2811
	2812	# SO FAR, TOTALVIEW NEEDS HOSTFILE MECHANISM FOR EXECUTION
	2813	#(( ii = 1 ))
	2814	#while (( ii <= $numprocs ))
	2815	#do
	2816	# echo $localhost_realname >> hostfile
	2817	# (( ii = ii + 1 ))
	2818	#done
	2819	#export MP_HOSTFILE=hostfile
	2820
	2821	if [[ "$LOADLBATCH" = yes ]]
	2822	then
	2823	totalview poe a.out $ROPTS
	2824	else
	2825	echo totalview poe -a a.out -procs $numprocs -rmpool 0 -nodes 1 $ROPTS
	2826	export TVDSVRLAUNCHCMD=ssh
	2827	totalview poe -a a.out -procs $numprocs -rmpool 0 -nodes 1 $ROPTS
	2828	fi
[211]	2829	elif [[ $(echo $localhost \| cut -c1-5) = lcsgi ]]
	2830	then
	2831	# CURRENTLY NO DEBUGGER ON LCSGI
	2832	if [[ $run_coupled_model = true ]]
	2833	then
	2834	printf "\n +++ no debug in coupled mode available on \"$localhost\" "
	2835	locat=debug
	2836	exit
[223]	2837	else
	2838	echo "no_coupling" > runfile_atmos
[211]	2839	fi
	2840	(( ii = $numprocs / $threads_per_task ))
	2841	export OMP_NUM_THREADS=$threads_per_task
	2842	echo "OMP_NUM_THREADS=$OMP_NUM_THREADS"
	2843	if [[ $threads_per_task != 1 ]]
	2844	then
	2845	printf "\n threads per task: $threads_per_task"
	2846	fi
	2847	printf "\n\n"
[223]	2848	if [[ $( echo $mpilib \| cut -c1-3 ) = mpt ]]
	2849	then
	2850	# export MPI_LAUNCH_TIMEOUT=360
	2851	if [[ "$totalview" = true ]]
	2852	then
	2853	printf "\n running totalview debugger"
	2854	mpiexec_mpt -tv -n $ii ./a.out $ROPTS < runfile_atmos
	2855	else
	2856	mpiexec_mpt -np $ii ./a.out $ROPTS < runfile_atmos
	2857	fi
	2858	elif [[ $( echo $mpilib \| cut -c1-3 ) = mva ]]
	2859	then
	2860	# ulimit -s 300000 # A too large stack size causes problems
	2861	# export MV2_NUM_PORTS=2
	2862	# export MV2_CPU_MAPPING=0:1:2:3
	2863	mpiexec ./a.out $ROPTS < runfile_atmos
	2864	fi
[1]	2865	else
	2866	printf "\n +++ no debug available on \"$localhost\" "
	2867	printf "\n or not implemented in mrun so far"
	2868	locat=debug
	2869	exit
	2870	fi
	2871	else
	2872	if [[ -n $numprocs ]]
	2873	then
	2874
	2875	# RUNNING THE PROGRAM ON PARALLEL MACHINES
	2876	if [[ $(echo $host \| cut -c1-3) = ibm ]]
	2877	then
	2878	# SETUP THE IBM MPI ENVIRONMENT
	2879	export MP_SHARED_MEMORY=yes
	2880	export AIXTHREAD_SCOPE=S
	2881	export OMP_NUM_THREADS=$threads_per_task
	2882	export XLSMPOPTS="spins=0:yields=0:stack=20000000"
	2883	export AUTHSTATE=files
	2884	export XLFRTEOPTS="nlwidth=132:err_recovery=no" # RECORD-LENGTH OF NAMELIST-OUTPUT
	2885	# export MP_PRINTENV=yes
	2886
	2887	# TUNING-VARIABLEN ZUR VERBESSERUNG DER KOMMUNIKATION
	2888	# ZEIGEN ABER DERZEIT (SEP 04, FEDERATION) KAUM WIRKUNG
	2889	export MP_WAIT_MODE=poll
	2890	[[ $node_usage = not_shared ]] && export MP_SINGLE_THREAD=yes
	2891	# export MP_EAGER_LIMIT=65535
	2892
	2893	# # TESTWEISE FUER TURBOMPI (JAN 05)
	2894	# export MPJ_MTAB=128
	2895	# export MPJ_ALLTOALL=1
	2896	# export MPJ_ALLTOALLV=1
	2897
	2898	if [[ "$LOADLBATCH" = yes ]]
	2899	then
	2900	printf "\n--- Control: OMP_NUM_THREADS = \"$OMP_NUM_THREADS\" \n"
	2901	if [[ "$cond1" = hpmcount \|\| "$cond2" = hpmcount ]]
	2902	then
[102]	2903	/opt/optibm/HPM_2_4_1/bin/hpmcount a.out $ROPTS
[1]	2904	else
[102]	2905	poe ./a.out $ROPTS
[1]	2906	fi
	2907	else
	2908	if [[ $localhost = ibmb \|\| $localhost = ibmh \|\| $localhost = ibms ]]
	2909	then
[102]	2910	poe a.out -procs $numprocs -nodes 1 -rmpool 0 $ROPTS
[1]	2911	elif [[ $localhost = ibmy ]]
	2912	then
	2913	if [[ -f $hostfile ]]
	2914	then
	2915	cp $hostfile hostfile
	2916	else
	2917	(( ii = 1 ))
	2918	while (( ii <= $numprocs ))
	2919	do
	2920	echo $localhost_realname >> hostfile
	2921	(( ii = ii + 1 ))
	2922	done
	2923	fi
	2924	export MP_HOSTFILE=hostfile
[102]	2925	./a.out -procs $tasks_per_node $ROPTS
[1]	2926	else
	2927	if [[ "$host_file" = "" ]]
	2928	then
	2929	printf "\n +++ no hostfile given in configuration file"
	2930	locat=config_file
	2931	exit
	2932	else
	2933	eval host_file=$host_file
	2934	fi
	2935	export MP_HOSTFILE=$host_file
[102]	2936	poe a.out -procs $numprocs -tasks_per_node $numprocs $ROPTS
[1]	2937	fi
	2938	fi
[251]	2939	elif [[ $host = nech \|\| $host = necriam ]]
[1]	2940	then
	2941	(( ii = nodes ))
	2942	if [[ $ii = 1 ]]
	2943	then
	2944	export F_ERRCNT=0 # acceptable number of errors before program is stopped
	2945	export MPIPROGINF=YES
[61]	2946	# export F_TRACE=YES\|FMT1\|FMT2 # output of ftrace informations to job protocol
[1]	2947	echo "*** execution on single node with mpirun"
[102]	2948	mpirun -np $numprocs ./a.out $ROPTS
[1]	2949	else
	2950	(( i = 0 ))
	2951	while (( i < ii ))
	2952	do
	2953	echo "-h $i -p $tasks_per_node -e ./mpi_exec_shell" >> multinode_config
	2954	(( i = i + 1 ))
	2955	done
	2956
	2957	echo "#!/bin/sh" > mpi_exec_shell
	2958	echo " " >> mpi_exec_shell
	2959	echo "set -u" >> mpi_exec_shell
	2960	echo "F_ERRCNT=0" >> mpi_exec_shell
	2961	echo "MPIPROGINV=YES" >> mpi_exec_shell
	2962	echo "OMP_NUM_THREADS=$threads_per_task" >> mpi_exec_shell
	2963	echo "cpurest=$cpurest" >> mpi_exec_shell
	2964	echo "fname=$fname" >> mpi_exec_shell
	2965	echo "localhost=$localhost" >> mpi_exec_shell
	2966	echo "return_addres=$return_addres" >> mpi_exec_shell
	2967	echo "return_username=$return_username" >> mpi_exec_shell
	2968	echo "tasks_per_node=$tasks_per_node" >> mpi_exec_shell
	2969	echo "write_binary=$write_binary" >> mpi_exec_shell
	2970	echo "use_seperate_pe_for_dvrp_output=$use_seperate_pe_for_dvrp_output" >> mpi_exec_shell
	2971	echo " " >> mpi_exec_shell
	2972	echo "export F_ERRCNT" >> mpi_exec_shell
	2973	echo "export MPIPROGINV" >> mpi_exec_shell
	2974	echo "export OMP_NUM_THREADS" >> mpi_exec_shell
	2975	echo "export cpurest" >> mpi_exec_shell
	2976	echo "export fname" >> mpi_exec_shell
	2977	echo "export localhost" >> mpi_exec_shell
	2978	echo "export return_addres" >> mpi_exec_shell
	2979	echo "export return_username" >> mpi_exec_shell
	2980	echo "export tasks_per_node" >> mpi_exec_shell
	2981	echo "export write_binary" >> mpi_exec_shell
	2982	echo "export use_seperate_pe_for_dvrp_output" >> mpi_exec_shell
	2983	echo " " >> mpi_exec_shell
[102]	2984	echo "exec ./a.out" >> mpi_exec_shell
[1]	2985
	2986	chmod u+x mpi_exec_shell
	2987	export MPIPROGINF=YES
	2988	mpirun -f multinode_config &
	2989	wait
	2990
	2991	fi
[82]	2992	elif [[ $(echo $host \| cut -c1-2) = lc && $host != lctit ]]
[1]	2993	then
	2994
	2995	# COPY HOSTFILE FROM SOURCE DIRECTORY OR CREATE IT, IF IT
	2996	# DOES NOT EXIST
[179]	2997	if [[ $host != lcsgih && $host != lcsgib ]]
[1]	2998	then
[179]	2999	if [[ -f $hostfile ]]
	3000	then
	3001	cp $hostfile hostfile
	3002	else
	3003	(( ii = 1 ))
	3004	while (( ii <= $numprocs / $threads_per_task ))
	3005	do
	3006	echo $localhost_realname >> hostfile
	3007	(( ii = ii + 1 ))
	3008	done
	3009	fi
	3010	eval zeile=\"`head -n $ii hostfile`\"
	3011	printf "\n *** running on: $zeile"
[1]	3012	fi
[179]	3013
[1]	3014	(( ii = $numprocs / $threads_per_task ))
	3015	export OMP_NUM_THREADS=$threads_per_task
[246]	3016	# echo "OMP_NUM_THREADS=$OMP_NUM_THREADS"
[1]	3017	if [[ $threads_per_task != 1 ]]
	3018	then
	3019	printf "\n threads per task: $threads_per_task"
	3020	fi
[102]	3021	if [[ $run_coupled_model = false ]]
[1]	3022	then
[223]	3023	echo "no_coupling" > runfile_atmos
[102]	3024	printf "\n\n"
[179]	3025	if [[ $host = lcsgih \|\| $host = lcsgib ]]
[164]	3026	then
[221]	3027	if [[ $( echo $mpilib \| cut -c1-3 ) = mpt ]]
	3028	then
	3029	# export MPI_LAUNCH_TIMEOUT=360
[223]	3030	mpiexec_mpt -np $ii ./a.out $ROPTS < runfile_atmos
[221]	3031	elif [[ $( echo $mpilib \| cut -c1-3 ) = mva ]]
	3032	then
	3033	# ulimit -s 300000 # A too large stack size causes problems
	3034	# export MV2_NUM_PORTS=2
	3035	# export MV2_CPU_MAPPING=0:1:2:3
[223]	3036	mpiexec ./a.out $ROPTS < runfile_atmos
[221]	3037	fi
[179]	3038	elif [[ $host = lcxt4 ]]
	3039	then
[223]	3040	aprun -n $ii -N $tasks_per_node a.out $ROPTS < runfile_atmos
[164]	3041	else
[223]	3042	mpiexec -machinefile hostfile -n $ii a.out < runfile_atmos $ROPTS
[164]	3043	fi
[1]	3044	else
[164]	3045
[206]	3046	# currently there is no full MPI-2 support on ICE and XT4
	3047	(( iia = $numprocs_atmos / $threads_per_task ))
	3048	(( iio = $numprocs_ocean / $threads_per_task ))
	3049	printf "\n coupled run ($iia atmosphere, $iio ocean)"
	3050	printf "\n using $coupled_mode coupling"
[102]	3051	printf "\n\n"
[164]	3052
[206]	3053	if [[ $coupled_mode = "mpi2" ]]
[164]	3054	then
[206]	3055	echo "atmosphere_to_ocean $iia $iio" > runfile_atmos
	3056	echo "ocean_to_atmosphere $iia $iio" > runfile_ocean
	3057	if [[ $host = lcsgih \|\| $host = lcsgib ]]
	3058	then
[197]	3059
[221]	3060	if [[ $( echo $mpilib \| cut -c1-3 ) = mpt ]]
	3061	then
	3062	# export MPI_LAUNCH_TIMEOUT=360
	3063	mpiexec_mpt -np $iia ./a.out $ROPTS < runfile_atmos &
	3064	mpiexec_mpt -np $iio ./a.out $ROPTS < runfile_ocean &
	3065	elif [[ $( echo $mpilib \| cut -c1-3 ) = mva ]]
	3066	then
	3067	# ulimit -s 300000 # A too large stack size causes problems
	3068	# export MV2_NUM_PORTS=2
	3069	# export MV2_CPU_MAPPING=0:1:2:3
	3070	mpiexec -n $iia ./a.out $ROPTS < runfile_atmos &
	3071	mpiexec -n $iio ./a.out $ROPTS < runfile_ocean &
	3072	fi
[197]	3073
[206]	3074	elif [[ $host = lcxt4 ]]
	3075	then
[197]	3076
[206]	3077	aprun -n $iia -N $tasks_per_node a.out < runfile_atmos $ROPTS &
	3078	aprun -n $iio -N $tasks_per_node a.out < runfile_ocean $ROPTS &
	3079
	3080	else
	3081	# WORKAROUND BECAUSE mpiexec WITH -env option IS NOT AVAILABLE ON SOME SYSTEMS
	3082	mpiexec -machinefile hostfile -n $iia a.out $ROPTS < runfile_atmos &
	3083	mpiexec -machinefile hostfile -n $iio a.out $ROPTS < runfile_ocean &
	3084	# mpiexec -machinefile hostfile -n $iia -env coupling_mode atmosphere_to_ocean a.out $ROPTS &
	3085	# mpiexec -machinefile hostfile -n $iio -env coupling_mode ocean_to_atmosphere a.out $ROPTS &
	3086	fi
	3087	wait
	3088
[164]	3089	else
	3090
[206]	3091	echo "coupled_run $iia $iio" > runfile_atmos
	3092	if [[ $host = lcsgih \|\| $host = lcsgib ]]
	3093	then
	3094
[221]	3095	if [[ $( echo $mpilib \| cut -c1-3 ) = mpt ]]
	3096	then
	3097	# export MPI_LAUNCH_TIMEOUT=360
	3098	mpiexec_mpt -np $ii ./a.out $ROPTS < runfile_atmos
	3099	elif [[ $( echo $mpilib \| cut -c1-3 ) = mva ]]
	3100	then
	3101	# ulimit -s 300000 # A too large stack size causes problems
	3102	# export MV2_NUM_PORTS=2
	3103	# export MV2_CPU_MAPPING=0:1:2:3
	3104	mpiexec ./a.out $ROPTS < runfile_atmos
	3105	fi
[206]	3106
	3107	elif [[ $host = lcxt4 ]]
	3108	then
	3109
	3110	aprun -n $ii -N $tasks_per_node a.out < runfile_atmos $ROPTS
	3111
	3112	fi
	3113	wait
[164]	3114	fi
[102]	3115
	3116	# if [[ $scirocco = true ]]
	3117	# then
	3118	# mpiexec -machinefile hostfile -n $ii a.out $ROPTS
	3119	# else
	3120	# mpirun -machinefile hostfile -np $ii a.out $ROPTS
	3121	# fi
[206]	3122	fi
[1]	3123	elif [[ $host = decalpha ]]
	3124	then
[102]	3125	dmpirun -np $numprocs a.out $ROPTS
[1]	3126	elif [[ $host = lctit ]]
	3127	then
	3128	export runfile=runfile.$kennung
	3129
	3130	echo "cd $PWD" > $runfile
	3131	echo "export OMP_NUM_THREADS=$OMP_NUM_THREADS" >> $runfile
	3132	echo "export cpurest=$cpurest" >> $runfile
	3133	echo "export fname=$fname" >> $runfile
	3134	echo "export localhost=$localhost" >> $runfile
	3135	echo "export return_addres=$return_addres" >> $runfile
	3136	echo "export return_username=$return_username" >> $runfile
	3137	echo "export tasks_per_node=$tasks_per_node" >> $runfile
	3138	echo "export write_binary=$write_binary" >> $runfile
	3139	echo "export use_seperate_pe_for_dvrp_output=$use_seperate_pe_for_dvrp_output" >> $runfile
	3140	echo "./a.out" >> $runfile
	3141	chmod u+x $runfile
	3142
	3143	if [[ "$QUEUE" = interactive ]]
	3144	then
[102]	3145	mpirun -np $numprocs a.out $ROPTS
[1]	3146	else
[127]	3147	(( mem_tsubame = $memory / 1024.0 ))
	3148	echo "Memory for Tsubame for each process in GB:", $mem_tsubame
[118]	3149	# n1ge -fore -g 1S060156 -mpi $numprocs -mem 4 -N palm -q $queue a.out $ROPTS
[126]	3150	/n1ge/TITECH_GRID/tools/bin/n1ge -fore -g $group_number -mpi ${numprocs}:$tasks_per_node -mem $mem_tsubame -N palm -rt $minuten -q $queue a.out $ROPTS
[1]	3151	fi
	3152
	3153	rm $runfile
	3154	else
[102]	3155	mpprun -n $numprocs a.out $ROPTS
[1]	3156	fi
	3157	[[ $? != 0 ]] && execution_error=true
	3158
	3159
	3160	# PERFORMANCE-AUSWERTUNG MIT APPRENTICE
	3161	if [[ "$cond1" = apprentice \|\| "$cond2" = apprentice ]]
	3162	then
	3163	apprentice
	3164	fi
	3165	else
[102]	3166	a.out $ROPTS
[1]	3167	fi
	3168	fi
	3169	if [[ $? != 0 \|\| $execution_error = true ]]
	3170	then
	3171
	3172	# ABBRUCH BEI LAUFZEITFEHLER
[102]	3173	# [[ ! ( "$cond1" = debug \|\| "$cond2" = debug ) ]] && cat aout_output*
[1]	3174	printf "\n +++ runtime error occured"
	3175	locat=execution
	3176	exit
	3177	else
[102]	3178	# [[ ! ( "$cond1" = debug \|\| "$cond2" = debug ) ]] && cat aout_output*
[1]	3179	printf "\n$striche\n *** execution finished \n"
	3180	fi
	3181
	3182
	3183
	3184	# EVENTUELLE OUTPUT-KOMMANDOS ABARBEITEN
	3185	(( i = 0 ))
	3186	while (( i < ioc ))
	3187	do
	3188	(( i = i + 1 ))
	3189	if (( i == 1 ))
	3190	then
	3191	printf "\n\n *** execution of OUTPUT-commands:\n$striche"
	3192	fi
	3193	printf "\n >>> ${out_command[$i]}"
	3194	eval ${out_command[$i]}
	3195	if (( i == ioc ))
	3196	then
	3197	printf "\n$striche\n"
	3198	fi
	3199	done
	3200
	3201
	3202	# EVTL. INHALT DES AKTUELLEN VERZEICHNISSES AUSGEBEN
	3203	if [[ $do_trace = true ]]
	3204	then
	3205	printf "\n\n"
	3206	ls -al
	3207	fi
	3208
	3209
	3210
	3211	# OUTPUT-DATEIEN AN IHRE ZIELORTE KOPIEREN
	3212	(( i = 0 ))
	3213	while (( i < iout ))
	3214	do
	3215	(( i = i + 1 ))
	3216	if (( i == 1 ))
	3217	then
	3218	printf "\n\n *** saving OUTPUT-files:\n$striche"
	3219	fi
	3220
	3221	# PRUEFEN, OB EINZELDATEI ODER DATEI PRO PROZESSOR
	3222	files_for_pes=false; filetyp=file
	3223	if [[ "${actionout[$i]}" = pe && -n $numprocs ]]
	3224	then
	3225	files_for_pes=true; filetyp=directory
	3226	actionout[$i]=""
	3227	elif [[ "${actionout[$i]}" = pe && ! -n $numprocs ]]
	3228	then
	3229	actionout[$i]=""
	3230	elif [[ "${actionout[$i]}" = arpe && -n $numprocs ]]
	3231	then
	3232	files_for_pes=true; filetyp=directory
	3233	actionout[$i]="ar"
	3234	elif [[ "${actionout[$i]}" = arpe && ! -n $numprocs ]]
	3235	then
	3236	actionout[$i]="ar"
	3237	elif [[ "${actionout[$i]}" = flpe && -n $numprocs ]]
	3238	then
	3239	files_for_pes=true; filetyp=directory
	3240	actionout[$i]="fl"
	3241	elif [[ "${actionout[$i]}" = flpe && ! -n $numprocs ]]
	3242	then
	3243	actionout[$i]="fl"
	3244	elif [[ "${actionout[$i]}" = trpe && -n $numprocs ]]
	3245	then
	3246	files_for_pes=true; filetyp=directory
	3247	actionout[$i]="tr"
	3248	elif [[ "${actionout[$i]}" = trpe && ! -n $numprocs ]]
	3249	then
	3250	actionout[$i]="tr"
	3251	fi
	3252
	3253	if [[ ! -f ${localout[$i]} && $files_for_pes = false ]]
	3254	then
	3255	printf "\n +++ temporary OUTPUT-file ${localout[$i]} does not exist\n"
	3256	elif [[ ! -f ${localout[$i]}/_0000 && $files_for_pes = true ]]
	3257	then
	3258	printf "\n +++ temporary OUTPUT-file ${localout[$i]}/.... does not exist\n"
	3259	else
	3260
	3261
	3262	# KOPIEREN PER FTP/SCP (IMMER IM BINAERMODUS, -M: FALLS ZIELKATALOG
	3263	# NICHT VORHANDEN, WIRD VERSUCHT, IHN ANZULEGEN), ABER NUR BEI
	3264	# REMOTE-RECHNUNGEN
	3265	if [[ "${actionout[$i]}" = tr ]]
	3266	then
	3267	if [[ $localhost != $fromhost ]]
	3268	then
	3269	if [[ $files_for_pes = false ]]
	3270	then
	3271	cps=""
	3272	cst=""
	3273	else
	3274	cps=-c
	3275	cst="/"
	3276	fi
	3277	if [[ $localhost = ibmh \|\| $localhost = ibmb \|\| $localhost = nech ]]
	3278	then
	3279
	3280	# TRANSFER IN EIGENSTAENDIGEM JOB
	3281	# ZUERST KOPIE DER DATEI INS TEMPORAERE DATENVERZEICHNIS
	3282	[[ ! -d $tmp_data_catalog/TRANSFER ]] && mkdir -p $tmp_data_catalog/TRANSFER
	3283	file_to_transfer=${fname}_${localout[$i]}_to_transfer_$kennung
	3284	if [[ $files_for_pes = false ]]
	3285	then
	3286	ln -f ${localout[$i]} $tmp_data_catalog/TRANSFER/$file_to_transfer
	3287	else
	3288	mkdir $tmp_data_catalog/TRANSFER/$file_to_transfer
	3289	ln ${localout[$i]}/* $tmp_data_catalog/TRANSFER/$file_to_transfer
	3290	fi
	3291
	3292	echo "set -x" > transfer_${localout[$i]}
	3293	echo "cd $tmp_data_catalog/TRANSFER" >> transfer_${localout[$i]}
[82]	3294
	3295	printf "\n >>> OUTPUT: ${localout[$i]}$cst by SCP in seperate job to"
	3296	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}$cst"
	3297	printf "\n or higher cycle\n"
	3298	echo "batch_scp $cps -b -m -u $return_username $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
	3299
[1]	3300	echo "[[ \$? = 0 ]] && rm $file_to_transfer" >> transfer_${localout[$i]}
	3301
	3302	if [[ $localhost = nech ]]
	3303	then
[82]	3304	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 900 transfer_${localout[$i]}
[1]	3305	else
	3306	if [[ "$LOGNAME" = b323013 ]]
	3307	then
[164]	3308	subjob -v -q c1 -X 0 -m 1000 -t 900 -c $job_catalog transfer_${localout[$i]}
[1]	3309	else
[164]	3310	subjob -d -v -q c1 -X 0 -m 1000 -t 900 -c $job_catalog transfer_${localout[$i]}
[1]	3311	fi
	3312	fi
	3313
	3314	else
	3315
	3316	# TRANSFER INNERHALB DIESES JOBS
	3317	transfer_failed=false
[82]	3318	printf "\n >>> OUTPUT: ${localout[$i]}$cst by SCP to"
	3319	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}$cst\n"
	3320	batch_scp $cps -b -m -u $return_username $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
	3321	[[ $? != 0 ]] && transfer_failed=true
[1]	3322
	3323	# BEI FEHLGESCHLAGENEM TRANSFER SICHERUNGSKOPIE AUF
	3324	# LOKALER MASCHINE ANLEGEN
	3325	if [[ $transfer_failed = true ]]
	3326	then
	3327	printf " +++ transfer failed. Trying to save a copy on the local host under:\n"
	3328	printf " ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung\n"
	3329
	3330	# ERSTMAL PRUEFEN, OB VERZEICHNIS EXISTIERT. GEGEBENENFALLS
	3331	# ANLEGEN.
	3332	eval local_catalog=${pathout[$i]}
	3333	if [[ ! -d $local_catalog ]]
	3334	then
	3335	printf " *** local directory does not exist. Trying to create:\n"
	3336	printf " $local_catalog \n"
	3337	mkdir -p $local_catalog
	3338	fi
	3339	eval cp ${localout[$i]} ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung
	3340	transfer_problems=true
	3341	fi
	3342	fi
	3343	else
	3344
	3345	# WERTZUWEISUNG, SO DASS WEITER UNTEN NUR KOPIERT WIRD
	3346	actionout[$i]=""
	3347	fi
	3348	fi
	3349
	3350
	3351	# APPEND PER FTP/SCP (IMMER IM BINAERMODUS, -M: FALLS ZIELKATALOG
	3352	# NICHT VORHANDEN, WIRD VERSUCHT, IHN ANZULEGEN), ABER NUR BEI
	3353	# REMOTE-RECHNUNGEN
	3354	if [[ "${actionout[$i]}" = tra ]]
	3355	then
	3356	if [[ $localhost != $fromhost ]]
	3357	then
	3358	if [[ $localhost = ibmh \|\| $localhost = ibmb \|\| $localhost = nech ]]
	3359	then
	3360
	3361	# TRANSFER IN EIGENSTAENDIGEM JOB
	3362	# ZUERST KOPIE DER DATEI INS TEMPORAERE DATENVERZEICHNIS
	3363	[[ ! -d $tmp_data_catalog/TRANSFER ]] && mkdir -p $tmp_data_catalog/TRANSFER
	3364	file_to_transfer=${fname}_${localout[$i]}_to_transfer_$kennung
	3365	ln -f ${localout[$i]} $tmp_data_catalog/TRANSFER/$file_to_transfer
	3366
	3367	echo "set -x" > transfer_${localout[$i]}
	3368	echo "cd $tmp_data_catalog/TRANSFER" >> transfer_${localout[$i]}
[82]	3369
	3370	printf "\n >>> OUTPUT: ${localout[$i]} append by SCP in seperate job to"
	3371	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}"
	3372	printf "\n or higher cycle\n"
	3373	echo "batch_scp -A -b -m -u $return_username $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
	3374
[1]	3375	echo "[[ \$? = 0 ]] && rm $file_to_transfer" >> transfer_${localout[$i]}
	3376
	3377	if [[ $localhost = nech ]]
	3378	then
[82]	3379	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 900 transfer_${localout[$i]}
[1]	3380	else
	3381	if [[ $LOGNAME = b323013 ]]
	3382	then
[164]	3383	subjob -v -q c1 -X 0 -m 1000 -t 900 -c $job_catalog transfer_${localout[$i]}
[1]	3384	else
[164]	3385	subjob -d -v -q c1 -X 0 -m 1000 -t 900 -c $job_catalog transfer_${localout[$i]}
[1]	3386	fi
	3387	fi
	3388
	3389	else
	3390
	3391	# TRANSFER INNERHALB DIESES JOBS
	3392	transfer_failed=false
[82]	3393	printf "\n >>> OUTPUT: ${localout[$i]} append by SCP to"
	3394	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}\n"
	3395	batch_scp -A -b -m -u $return_username $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
	3396	[[ $? != 0 ]] && transfer_failed=true
[1]	3397
	3398	# BEI FEHLGESCHLAGENEM TRANSFER SICHERUNGSKOPIE AUF
	3399	# LOKALER MASCHINE ANLEGEN
	3400	if [[ $transfer_failed = true ]]
	3401	then
	3402	printf " +++ transfer failed. Trying to save a copy on the local host under:\n"
	3403	printf " ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung\n"
	3404
	3405	# ERSTMAL PRUEFEN, OB VERZEICHNIS EXISTIERT. GEGEBENENFALLS
	3406	# ANLEGEN
	3407	eval local_catalog=${pathout[$i]}
	3408	if [[ ! -d $local_catalog ]]
	3409	then
	3410	printf " *** local directory does not exist. Trying to create:\n"
	3411	printf " $local_catalog \n"
	3412	mkdir -p $local_catalog
	3413	fi
	3414
	3415	eval cp ${localout[$i]} ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung
	3416	transfer_problems=true
	3417	fi
	3418	fi
	3419	else
	3420
	3421	# WERTZUWEISUNG, SO DASS WEITER UNTEN NUR APPEND AUF
	3422	# LOKALER MASCHINE DURCHGEFUEHRT WIRD
	3423	actionout[$i]=a
	3424	fi
	3425	fi
	3426
	3427
	3428	# OUTPUT-DATEI FUER EINEN FORTSETZUNGSLAUF. DATEI WIRD PER
	3429	# LINK AUF DEN TEMPORAEREN DATENKATALOG GELEGT. OPTION -f WIRD
	3430	# VERWENDET, FALLS DORT NOCH EINE DATEI GLEICHEN NAMENS VORHANDEN
	3431	# SEIN SOLLTE. ANSCHLIESSEND WIRD SEINE ARCHIVIERUNG ANGESTOSSEN
	3432	if [[ "${actionout[$i]}" = fl ]]
	3433	then
	3434	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
	3435	chmod g+rx $tmp_data_catalog
	3436	if [[ $files_for_pes = false ]]
	3437	then
	3438	printf "\n >>> OUTPUT: ${localout[$i]} to"
	3439	printf "\n $tmp_data_catalog/${frelout[$i]} (temporary data catalog)\n"
	3440	ln -f ${localout[$i]} $tmp_data_catalog/${frelout[$i]}
	3441	else
	3442	printf "\n >>> OUTPUT: ${localout[$i]}/.... to"
	3443	printf "\n $tmp_data_catalog/${frelout[$i]} (temporary data catalog)\n"
	3444	mkdir $tmp_data_catalog/${frelout[$i]}
[149]	3445	cd ${localout[$i]}
	3446	for file in $(ls *)
	3447	do
	3448	ln -f $file $tmp_data_catalog/${frelout[$i]}
	3449	done
	3450	cd $TEMPDIR
[1]	3451	fi
	3452
	3453
	3454	# ARCHIVIERUNGSJOB WIRD ERZEUGT UND ABGESCHICKT
	3455	if [[ $store_on_archive_system = true ]]
	3456	then
	3457
	3458	if [[ $archive_system = asterix ]]
	3459	then
	3460	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
	3461	if [[ $files_for_pes = false ]]
	3462	then
	3463	echo "stageout ${frelout[$i]} > STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
	3464	else
	3465	echo "stageout -t ${frelout[$i]} > STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
	3466	fi
	3467	echo "cat STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
	3468	echo "if [[ \$(grep -c \"st.msg:150\" STAGE_OUTPUT${i}_$kennung) != 0 ]]" >> archive_${frelout[$i]}
	3469	echo "then" >> archive_${frelout[$i]}
	3470	echo " do_stageout=false" >> archive_${frelout[$i]}
	3471	echo "else" >> archive_${frelout[$i]}
	3472	echo " echo \" +++ $filetyp ${frelout[$i]} could not be stored on archive-system\" " >> archive_${frelout[$i]}
	3473	echo " cat /dev/null > ~/job_queue/ARCHIVE_ERROR_$fname" >> archive_${frelout[$i]}
	3474	echo " cat STAGE_OUTPUT${i}_$kennung > ~/job_queue/archive_${frelout[$i]}_error" >> archive_${frelout[$i]}
	3475	echo " echo \" *** $filetyp ${frelout[$i]} will be copied to \$WORK as backup\" " >> archive_${frelout[$i]}
	3476	if [[ $files_for_pes = false ]]
	3477	then
	3478	echo " cp ${frelout[$i]} \$WORK" >> archive_${frelout[$i]}
	3479	else
	3480	echo " cp -r ${frelout[$i]} \$WORK/${frelout[$i]}" >> archive_${frelout[$i]}
	3481	fi
	3482	echo " echo \" *** $filetyp ${frelout[$i]} saved\" " >> archive_${frelout[$i]}
	3483	echo "fi" >> archive_${frelout[$i]}
	3484	echo "rm STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
	3485	elif [[ $archive_system = DMF ]]
	3486	then
	3487	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
	3488	if [[ $files_for_pes = false ]]
	3489	then
	3490	printf "\n +++ archiving of single files impossible with $archive_system !\n"
	3491	locat=DMF
	3492	exit
	3493	else
	3494	# FUER RECHNER IN JUELICH. DORT KOENNTEN AUCH
	3495	# EINZELNE DATEIEN GESICHERT WERDEN (SPAETER KORR.)
	3496	echo "rm -rf \$ARCHIVE/${frelout[$i]}" >> archive_${frelout[$i]}
	3497	echo "cp -r ${frelout[$i]} \$ARCHIVE" >> archive_${frelout[$i]}
	3498	fi
	3499	elif [[ $archive_system = tivoli ]]
	3500	then
	3501	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
	3502	if [[ $files_for_pes = false ]]
	3503	then
	3504	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
	3505	echo "set -x" >> archive_${frelout[$i]}
	3506	echo "rm -rf \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
	3507	echo "cp ${frelout[$i]} \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
	3508	else
	3509
	3510	echo "set -x" >> archive_${frelout[$i]}
	3511	echo "rm -rf \$PERM/${frelout[$i]}/*" >> archive_${frelout[$i]}
	3512	echo "[[ ! -d \$PERM/${frelout[$i]} ]] && mkdir $PERM/${frelout[$i]}" >> archive_${frelout[$i]}
	3513	cd $tmp_data_catalog
	3514	all_files=`ls -1 ${frelout[$i]}/*`
	3515	cd - > /dev/null
	3516	(( inode = 0 ))
	3517	(( tp1 = tasks_per_node + 1 ))
	3518	while (( inode < nodes ))
	3519	do
	3520	# echo "*** all_files = \"$all_files\" "
	3521	files=`echo $all_files \| cut -d" " -f1-$tasks_per_node`
	3522	all_files=`echo $all_files \| cut -d" " -f$tp1-`
	3523	# echo "*** tasks_per_node = \"$tasks_per_node\" "
	3524	# echo "*** files = \"$files\" "
	3525	# echo "*** all_files = \"$all_files\" "
	3526	echo "tar cvf \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar $files" >> archive_${frelout[$i]}
	3527	echo "dsmc incremental \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar" >> archive_${frelout[$i]}
	3528	echo "dsmmigrate \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar" >> archive_${frelout[$i]}
	3529	(( inode = inode + 1 ))
	3530	done
	3531	# echo "rm -rf \$PERM/${frelout[$i]}.tar" >> archive_${frelout[$i]}
	3532	# echo "tar cvf \$PERM/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
	3533	fi
	3534	elif [[ $archive_system = ut ]]
	3535	then
	3536	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
	3537	if [[ $files_for_pes = false ]]
	3538	then
	3539	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
	3540	echo "set -x" >> archive_${frelout[$i]}
	3541	echo "rm -rf \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
	3542	echo "cp ${frelout[$i]} \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
	3543	else
	3544
	3545	echo "set -x" >> archive_${frelout[$i]}
	3546	echo "rm -rf \$UT/${frelout[$i]}/*" >> archive_${frelout[$i]}
	3547	echo "[[ ! -d \$UT/${frelout[$i]} ]] && mkdir $UT/${frelout[$i]}" >> archive_${frelout[$i]}
	3548	cd $tmp_data_catalog
	3549	all_files=`ls -1 ${frelout[$i]}/*`
	3550	cd - > /dev/null
	3551	(( inode = 0 ))
	3552	(( tp1 = tasks_per_node + 1 ))
	3553	while (( inode < nodes ))
	3554	do
	3555	files=`echo $all_files \| cut -d" " -f1-$tasks_per_node`
	3556	all_files=`echo $all_files \| cut -d" " -f$tp1-`
	3557	echo "tar cvf \$UT/${frelout[$i]}/${frelout[$i]}.node_$inode.tar $files" >> archive_${frelout[$i]}
	3558	(( inode = inode + 1 ))
	3559	done
	3560	fi
	3561	elif [[ $archive_system = none ]]
	3562	then
	3563	printf " +++ archiving on $localhost not available!\n"
	3564	fi
	3565
	3566	if [[ $archive_system != none ]]
	3567	then
	3568	if [[ $localhost = ibmh \|\| $localhost = ibmb ]]
	3569	then
[164]	3570	# subjob -d -v -q cdata -X 0 -m 1000 -t 43200 -c $job_catalog archive_${frelout[$i]}
	3571	subjob -v -q cdata -X 0 -m 1000 -t 43200 -c $job_catalog archive_${frelout[$i]}
[1]	3572	elif [[ $localhost = nech ]]
	3573	then
[82]	3574	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 7200 archive_${frelout[$i]}
[1]	3575	fi
	3576	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
	3577	fi
	3578	else
	3579	printf " +++ caution: option -A is switched on. No archiving on $archive_system!\n"
	3580	fi
	3581
	3582
	3583	# LEERDATEI IM BENUTZERVERZEICHNIS ANLEGEN, DAMIT BEKANNT IST,
	3584	# WIE DIE HOECHSTE ZYKLUSNUMMER AUF DEM ARCHIV-SYSTEM LAUTET
	3585	if [[ $files_for_pes = false ]]
	3586	then
	3587	cat /dev/null > ${pathout[$i]}
	3588	else
	3589	mkdir -p ${pathout[$i]}
	3590	fi
	3591
	3592	fi
	3593
	3594
	3595	# KOPIEREN AUF LOKALER MASCHINE ZUM ARCHIV-SYSTEM
	3596	# AUSSERDEM MUSS LEERDATEI ANGELEGT WERDEN, DAMIT BEKANNT IST,
	3597	# WIE DIE HOECHSTE ZYKLUSNUMMER AUF DEM ARCHIV-SYSTEM LAUTET
	3598	# FALLS IRGENDEINE (VON MEHREREN) ARCHIVIERUNGEN SCHIEF GEHT,
	3599	# WIRD FLAG GESETZT UND BLEIBT AUCH BEI WEITEREN ORDNUNGS-
	3600	# GEMAESSEN ARCHIVIERUNGEN GESETZT
	3601	if [[ "${actionout[$i]}" = ar ]]
	3602	then
	3603	if [[ $files_for_pes = false ]]
	3604	then
	3605	printf "\n >>> OUTPUT: ${localout[$i]} to"
	3606	printf "\n ${pathout[$i]}"
	3607	printf "\n File will be copied to archive-system ($archive_system) !\n"
	3608	else
	3609	printf "\n >>> OUTPUT: ${localout[$i]}/_.... to"
	3610	printf "\n ${pathout[$i]}"
	3611	printf "\n Directory will be copied to archive-system ($archive_system) !\n"
	3612	fi
	3613	mv ${localout[$i]} ${frelout[$i]}
	3614
	3615	file_saved=false
	3616
	3617	if [[ $archive_system = asterix ]]
	3618	then
	3619	do_stageout=true
	3620	(( stageout_anz = 0 ))
	3621	while [[ $do_stageout = true ]]
	3622	do
	3623	if [[ $files_for_pes = false ]]
	3624	then
	3625	stageout ${frelout[$i]} > STAGE_OUTPUT
	3626	else
	3627	stageout -t ${frelout[$i]} > STAGE_OUTPUT
	3628	fi
	3629	cat STAGE_OUTPUT
	3630	if [[ $(grep -c "st.msg:150" STAGE_OUTPUT) != 0 ]]
	3631	then
	3632	file_saved=true
	3633	do_stageout=false
	3634	else
	3635	if [[ $files_for_pes = false ]]
	3636	then
	3637	printf "\n +++ file ${frelout[$i]} could not be saved on archive-system"
	3638	else
	3639	printf "\n +++ directory ${frelout[$i]} could not be saved on archive-system"
	3640	fi
	3641	(( stageout_anz = stageout_anz + 1 ))
	3642	if (( stageout_anz == 10 ))
	3643	then
	3644	printf "\n +++ stoped after 10 unsuccessful tries!"
	3645	archive_save=false
	3646	do_stageout=false
	3647	else
	3648	printf "\n *** new try to store on archive after 15 min:"
	3649	sleep 900
	3650	fi
	3651	fi
	3652	done
	3653	elif [[ $archive_system = DMF ]]
	3654	then
	3655	if [[ $files_for_pes = false ]]
	3656	then
	3657	printf "\n +++ archiving of single files impossible on $archive_system!\n"
	3658	locat=DMF
	3659	exit
	3660	else
	3661	rm -rf $ARCHIVE/${frelout[$i]}
	3662	cp -r ${frelout[$i]} $ARCHIVE
	3663	fi
	3664	file_saved=true
	3665	elif [[ $archive_system = tivoli ]]
	3666	then
	3667	# ARCHIVIERUNG NUR PER BATCH-JOB MOEGLICH
	3668	# DATEI MUSS ZWISCHENZEITLICH INS TEMPORAERE DATENVERZEICHNIS
	3669	# GELEGT WERDEN
	3670	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
	3671	chmod g+rx $tmp_data_catalog
	3672	if [[ $files_for_pes = false ]]
	3673	then
	3674	ln -f ${frelout[$i]} $tmp_data_catalog/${frelout[$i]}
	3675	else
	3676	mkdir $tmp_data_catalog/${frelout[$i]}
	3677	ln -f ${frelout[$i]}/* $tmp_data_catalog/${frelout[$i]}
	3678	fi
	3679
	3680	# BATCH JOB GENERIEREN UND ABSCHICKEN; DATEI MUSS WIEDER
	3681	# AUS TEMPORAEREM DATENVERZEICHNIS ENTFERNT WERDEN
	3682	echo "cd $tmp_data_catalog" > archive_${frelout[$i]}
	3683	if [[ $files_for_pes = false ]]
	3684	then
	3685	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
	3686	echo "rm -rf \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
	3687	echo "cp ${frelout[$i]} \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
	3688	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
	3689	else
	3690	echo "rm -rf \$PERM/${frelout[$i]}.tar" >> archive_${frelout[$i]}
	3691	echo "tar cvf \$PERM/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
	3692	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
	3693	fi
	3694
[164]	3695	subjob -v -d -q cdata -X 0 -m 1000 -t 43200 -c $job_catalog archive_${frelout[$i]}
[1]	3696	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
	3697	file_saved=true
	3698
	3699	elif [[ $archive_system = ut ]]
	3700	then
	3701	# ARCHIVIERUNG NUR PER BATCH-JOB MOEGLICH
	3702	# DATEI MUSS ZWISCHENZEITLICH INS TEMPORAERE DATENVERZEICHNIS
	3703	# GELEGT WERDEN
	3704	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
	3705	chmod g+rx $tmp_data_catalog
	3706	if [[ $files_for_pes = false ]]
	3707	then
	3708	ln -f ${frelout[$i]} $tmp_data_catalog/${frelout[$i]}
	3709	else
	3710	mkdir $tmp_data_catalog/${frelout[$i]}
	3711	ln -f ${frelout[$i]}/* $tmp_data_catalog/${frelout[$i]}
	3712	fi
	3713
	3714	# BATCH JOB GENERIEREN UND ABSCHICKEN; DATEI MUSS WIEDER
	3715	# AUS TEMPORAEREM DATENVERZEICHNIS ENTFERNT WERDEN
	3716	echo "cd $tmp_data_catalog" > archive_${frelout[$i]}
	3717	if [[ $files_for_pes = false ]]
	3718	then
	3719	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
	3720	echo "rm -rf \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
	3721	echo "cp ${frelout[$i]} \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
	3722	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
	3723	else
	3724	echo "rm -rf \$UT/${frelout[$i]}.tar" >> archive_${frelout[$i]}
	3725	echo "tar cvf \$UT/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
	3726	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
	3727	fi
	3728
[82]	3729	subjob -v -c /pf/b/$usern/job_queue -d -q pp -X 0 -m 1000 -t 7200 archive_${frelout[$i]}
[1]	3730	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
	3731	file_saved=true
	3732
	3733	else
	3734	printf "\n +++ archive_system=\"$archive_system\" archiving impossible!"
	3735	archive_save=false
	3736	fi
	3737	if [[ $file_saved = true ]]
	3738	then
	3739	if [[ $files_for_pes = false ]]
	3740	then
	3741	cat /dev/null > ${pathout[$i]}
	3742	else
	3743	mkdir -p ${pathout[$i]}
	3744	fi
	3745	fi
	3746	fi
	3747
	3748	# APPEND AUF LOKALER MASCHINE
	3749	if [[ "${actionout[$i]}" = "a" ]]
	3750	then
	3751	printf "\n >>> OUTPUT: ${localout[$i]} append to ${pathout[$i]}\n"
	3752	cat ${localout[$i]} >> ${pathout[$i]}
	3753	fi
	3754
	3755	# KOPIEREN AUF LOKALER MASCHINE
	3756	# ES MUSS KOPIERT WERDEN, DA MOVE NICHT UEBER FILESYSTEM HINAUS MOEGLICH
	3757	if [[ "${actionout[$i]}" = "" && $files_for_pes = false ]]
	3758	then
	3759
	3760	# KOPIEREN AUF EINPROZESSORMASCHINE
[5]	3761	if [[ "${extout[$i]}" != " " && "${extout[$i]}" != "" ]]
[1]	3762	then
	3763	printf "\n >>> OUTPUT: ${localout[$i]} to ${pathout[$i]}.${extout[$i]}\n"
[149]	3764	if [[ $link_local_output = true ]]
	3765	then
	3766	printf " using ln -f\n"
	3767	ln -f ${localout[$i]} ${pathout[$i]}.${extout[$i]}
	3768	fi
	3769	# If "ln -f" fails of if "$link_local_output = false" do a normal "cp"
	3770	if [[ ! -f "${pathout[$i]}.${extout[$i]}" ]]
	3771	then
	3772	if [[ $link_local_output = true ]]
	3773	then
	3774	printf " ln failed, using cp...\n"
	3775	fi
	3776	cp ${localout[$i]} ${pathout[$i]}.${extout[$i]}
	3777	fi
[1]	3778	else
	3779	printf "\n >>> OUTPUT: ${localout[$i]} to ${pathout[$i]}\n"
[149]	3780	if [[ $link_local_output = true ]]
	3781	then
	3782	printf " using ln -f\n"
	3783	ln -f ${localout[$i]} ${pathout[$i]}
	3784	fi
	3785	# If "ln -f" fails of if "$link_local_output = false" do a normal "cp"
	3786	if [[ ! -f "${pathout[$i]}" ]]
	3787	then
	3788	if [[ $link_local_output = true ]]
	3789	then
	3790	printf " ln failed, using cp...\n"
	3791	fi
	3792	cp ${localout[$i]} ${pathout[$i]}
	3793	fi
[1]	3794	fi
	3795
	3796	elif [[ "${actionout[$i]}" = "" && $files_for_pes = true ]]
	3797	then
	3798
	3799	# DIE DEN PROZESSOREN EINES PARALLELRECHNERS ZUGEHOERIGEN
	3800	# DATEIEN WERDEN ERST IN EINEM KATALOG GESAMMELT UND DIESER
	3801	# WIRD DANN KOPIERT
	3802	# PER MOVE UMBENANNT WERDEN
	3803	printf "\n >>> OUTPUT: ${localout[$i]}/_.... to ${pathout[$i]}\n"
[149]	3804	if [[ $link_local_output = true ]]
	3805	then
	3806	printf " using ln -f\n"
	3807	mkdir ${pathout[$i]}
	3808	cd ${localout[$i]}
	3809	for file in $(ls *)
	3810	do
	3811	ln -f $file ${pathout[$i]}
	3812	done
	3813	cd $TEMPDIR
	3814	fi
	3815	# If "ln -f" fails of if "$link_local_output = false" do a normal "cp -r"
	3816	if [[ ! -f "${pathout[$i]}/_0000" ]]
	3817	then
	3818	if [[ $link_local_output = true ]]
	3819	then
	3820	printf " ln failed for .../_0000, using cp...\n"
	3821	fi
	3822	cp -r ${localout[$i]} ${pathout[$i]}
	3823	fi
[1]	3824
	3825	fi
	3826	fi
	3827	done
	3828	if (( i != 0 ))
	3829	then
	3830	if [[ $transfer_problems = true ]]
	3831	then
	3832	printf "\n$striche\n *** OUTPUT-files saved"
	3833	printf "\n +++ WARNING: some data transfers failed! \n"
	3834	else
	3835	printf "\n$striche\n *** all OUTPUT-files saved \n"
	3836	fi
	3837	fi
	3838
	3839
	3840	# EVENTUELL FOLGEJOB STARTEN
	3841	# DATEI CONTINUE_RUN MUSS VOM BENUTZERPROGRAMM AUS ERZEUGT WERDEN
	3842	if [[ -f CONTINUE_RUN ]]
	3843	then
	3844
	3845	if [[ $archive_save = true ]]
	3846	then
	3847
	3848	# ZUERST IN MRUN-AUFRUF OPTIONEN FUER FORTSETZUNGSLAUF, FUER
	3849	# STILLES ABARBEITEN (OHNE INTERAKTIVE RUECKFAGEN) UND FUER
	3850	# BATCH-BETRIEB (NUR WICHTIG, FALLS BATCH AUF LOKALER MASCHINE
	3851	# DURCHGEFUEHRT WERDEN SOLL) EINFUEGEN, FALLS NICHT BEREITS VOR-
	3852	# HANDEN
	3853	[[ $(echo $mc \| grep -c "\-C") = 0 ]] && mc="$mc -C"
	3854	[[ $(echo $mc \| grep -c "\-v") = 0 ]] && mc="$mc -v"
	3855	[[ $(echo $mc \| grep -c "\-b") = 0 ]] && mc="$mc -b"
	3856	if [[ $(echo $mc \| grep -c "#") != 0 ]]
	3857	then
	3858	mc=`echo $mc \| sed 's/#/f/g'`
	3859	fi
	3860
	3861
	3862	# JOB STARTEN
	3863	printf "\n\n *** initiating restart-run on \"$return_addres\" using command:\n"
	3864	echo " $mc"
	3865	printf "\n$striche\n"
	3866	if [[ $localhost != $fromhost ]]
	3867	then
	3868
[204]	3869	if [[ $localhost = lcsgih \|\| $localhost = lcsgib \|\| $localhost = nech \|\| $localhost = ibmb \|\| $localhost = ibmh \|\| $localhost = ibms \|\| $localhost = lctit ]]
[1]	3870	then
	3871	echo "*** ssh will be used to initiate restart-runs!"
	3872	echo " return_addres=\"$return_addres\" "
	3873	echo " return_username=\"$return_username\" "
	3874	if [[ $return_addres = 172.20.25.41 ]]
	3875	then
	3876	# WORKAROUND AUF SCIROCCO AM TIT
[33]	3877	print "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc " \| ssh $return_addres -l $return_username
[1]	3878	else
[33]	3879	ssh $return_addres -l $return_username "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc "
[1]	3880	fi
	3881	else
	3882	printf "\n +++ no restart mechanism available for host \"$localhost\" "
	3883	locat=restart; exit
	3884	fi
	3885
	3886	# WARTEN, DAMIT SICH RESTART JOB IN QUEUE EINREIHEN KANN, BEVOR
	3887	# DER AKTUELLE JOB ENDET
	3888	sleep 30
	3889
	3890	else
	3891
	3892	# BEI RECHNUNGEN AUF LOKALER MASCHINE KANN MRUN DIREKT AUFGE-
[108]	3893	# RUFEN WERDEN, AUSSER AUF lcfimm
[1]	3894	cd $LOCAL_PWD
[108]	3895	if [[ $localhost = lcfimm ]]
	3896	then
	3897	ssh $return_addres -l $return_username "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc "
	3898	else
	3899	eval $mc # ' MUESSEN AUSGEWERTET WERDEN
	3900	fi
[1]	3901	cd - > /dev/null
	3902	fi
	3903	printf "\n$striche\n *** restart-run initiated \n"
	3904
	3905
	3906	# EVENTUELL INPUT-DATEIEN, DIE VON TEMPORAEREM DATENVERZEICHNIS
	3907	# GEHOLT WORDEN SIND, LOESCHEN
	3908	(( i = 0 ))
	3909	while (( i < iin ))
	3910	do
	3911	(( i = i + 1 ))
	3912	if [[ "${got_tmp[$i]}" = true && $keep_data_from_previous_run = false ]]
	3913	then
	3914	rm -r $tmp_data_catalog/${frelin[$i]}
	3915	fi
	3916	done
	3917
	3918	else
	3919
	3920	printf "\n +++ no restart-run possible, since errors occured"
	3921	printf "\n during the archive process"
	3922	fi
	3923
	3924	fi
	3925
	3926
	3927
	3928	# EVTL. EMAIL-BENACHRICHTIGUNG UEBER ABGESCHLOSSENEN LAUF
	3929	if [[ "$email_notification" != "" ]]
	3930	then
	3931
	3932	if [[ $localhost != $fromhost ]]
	3933	then
	3934	if [[ -f CONTINUE_RUN ]]
	3935	then
	3936	echo "PALM restart run necessary" > email_text
	3937	echo "description header of actual run:" >> email_text
	3938	cat CONTINUE_RUN >> email_text
	3939	echo "mrun-command to restart:" >> email_text
	3940	echo "$mc" >> email_text
	3941	else
	3942	echo "PALM run with base filename \"$fname\" on host \"$localhost\" finished" > email_text
	3943	fi
	3944	mail $email_notification < email_text
	3945	printf "\n *** email notification sent to \"$email_notification\" "
	3946	fi
	3947	fi
	3948
	3949
	3950
	3951	# ALLE ARBEITEN BEENDET. TEMPORAERER KATALOG KANN GELOESCHT WERDEN
	3952	cd $HOME
	3953	[[ $delete_temporary_catalog = true ]] && rm -rf $TEMPDIR
	3954
	3955	else
	3956
	3957
	3958	# FALLS AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL, WERDEN JETZT ENTSPRE-
	3959	# CHENDE AKTIONEN DURCHGEFUEHRT
	3960
	3961	# MRUN-BEFEHL FUER REMOTE-MASCHINE ZUSAMMENSTELLEN
[82]	3962	mrun_com="$mrun_script_name -a $afname -c $config_file -d $fname -h $host -H $fromhost -m $memory -t $cpumax -q $queue -R $return_addres -U $return_username -u $remote_username"
[1]	3963	[[ "$cpp_opts" != "" ]] && mrun_com=${mrun_com}" -D \"$cpp_opts\""
[79]	3964	[[ "$global_revision" != "" ]] && mrun_com=${mrun_com}" -G \"$global_revision\""
[123]	3965	[[ $group_number != none ]] && mrun_com=${mrun_com}" -g $group_number"
[1]	3966	[[ $do_compile = true ]] && mrun_com=${mrun_com}" -s \"$source_list\""
	3967	[[ "$input_list" != "" ]] && mrun_com=${mrun_com}" -i \"$input_list\""
	3968	[[ $ignore_archive_error = true ]] && mrun_com=${mrun_com}" -I"
	3969	[[ $keep_data_from_previous_run = true ]] && mrun_com=${mrun_com}" -k"
	3970	[[ "$additional_conditions" != "" ]] && mrun_com=${mrun_com}" -K \"$additional_conditions\""
	3971	# [[ "$makefile" != "$source_path/Makefile" ]] && mrun_com=${mrun_com}" -M \"$makefile\""
	3972	[[ "$output_list" != "" ]] && mrun_com=${mrun_com}" -o \"$output_list\""
	3973	[[ "$read_from_config" = false ]] && mrun_com=${mrun_com}" -S"
	3974	[[ $do_trace = true ]] && mrun_com=${mrun_com}" -x"
	3975	[[ "$numprocs" != "" ]] && mrun_com=${mrun_com}" -X $numprocs"
	3976	if [[ $use_openmp = true ]]
	3977	then
	3978	mrun_com=${mrun_com}" -O"
	3979	[[ "$tasks_per_node" != "" ]] && mrun_com=${mrun_com}" -T $threads_per_task"
	3980	else
	3981	[[ "$tasks_per_node" != "" ]] && mrun_com=${mrun_com}" -T $tasks_per_node"
	3982	fi
	3983	[[ $store_on_archive_system = false ]] && mrun_com=${mrun_com}" -A"
	3984	[[ $package_list != "" ]] && mrun_com=${mrun_com}" -p \"$package_list\""
	3985	[[ $return_password != "" ]] && mrun_com=${mrun_com}" -P $return_password"
	3986	[[ $delete_temporary_catalog = false ]] && mrun_com=${mrun_com}" -B"
[127]	3987	[[ $node_usage != default && "$(echo $node_usage \| cut -c1-3)" != "sla" && $node_usage != novice ]] && mrun_com=${mrun_com}" -n $node_usage"
[206]	3988	[[ $run_coupled_model = true ]] && mrun_com=${mrun_com}" -Y \"$coupled_dist\""
[1]	3989	if [[ $do_remote = true ]]
	3990	then
	3991	printf "\n>>>> MRUN-command on execution host:\n>>>> $mrun_com \n"
	3992	fi
	3993
	3994
	3995	# ZUSAMMENSTELLUNG DES JOBSCRIPTS AUF DATEI jobfile
	3996	jobfile=jobfile.$RANDOM
	3997
	3998
	3999	# TEMPORAERES VERZEICHNIS GENERIEREN UND NACH DORT WECHSELN
	4000	echo "mkdir $TEMPDIR" >> $jobfile
	4001	echo "cd $TEMPDIR" >> $jobfile
	4002
	4003
	4004	# EVENTUELL FEHLERVERFOLGUNG AKTIVIEREN
	4005	if [[ $do_trace = true ]]
	4006	then
	4007	echo "set -x" >> $jobfile
	4008	else
	4009	echo "set +vx" >> $jobfile
	4010	fi
	4011
	4012
[191]	4013	# BEREITSTELLUNG VON QUELLTEXTEN, MRUN-SCRIPTS UND KONFIGURATIONS-
	4014	# DATEI FUER DEN JOB
	4015	if [[ $( echo $host \| cut -c1-5 ) = lcsgi ]]
[1]	4016	then
	4017
[191]	4018	# KONFIGURATIONSDATEI UND MRUN_SCRIPT IN DAS SOURCE-VERZEICHNIS
	4019	# KOPIEREN
	4020	if [[ $restart_run != true ]]
	4021	then
	4022	cp $config_file $working_directory/SOURCES_FOR_RUN_$fname
	4023	cp ${PALM_BIN}/$mrun_script_name $working_directory/SOURCES_FOR_RUN_$fname
	4024	fi
[1]	4025
[191]	4026	# SOURCE-VERZEICHNIS VOM LOKALEN RECHNER PER SCP TRANSFERIEREN
[193]	4027	echo "set -x" >> $jobfile
	4028	echo "scp -r $return_username@$return_addres:$working_directory/SOURCES_FOR_RUN_$fname ." >> $jobfile
	4029	echo "export SOURCES_COMPLETE=true" >> $jobfile
[1]	4030
[193]	4031	# QUELLTEXTE, MRUN-SCRIPT UND KONFIGURATIONSDATEI IN DAS AKTUELLE
	4032	# ARBEITSVERZEICHNIS VERSCHIEBEN
	4033	echo "mv SOURCES_FOR_RUN_$fname/$config_file . " >> $jobfile
	4034	echo "mv SOURCES_FOR_RUN_$fname/$mrun_script_name . " >> $jobfile
	4035	echo "execute_mrun=true" >> $jobfile
	4036	echo " " >> $jobfile
	4037
[191]	4038	else
	4039
	4040	# ABSPEICHERN DER QUELLTEXTE (NUR FALLS UEBERSETZT WERDEN SOLL)
	4041	# SOWIE GEGEBENENFALLS DES MAKEFILES
	4042	if [[ $do_compile = true ]]
	4043	then
	4044
	4045	source_catalog=SOURCES_FOR_RUN_$fname
	4046
	4047	# UNTERVERZEICHNIS FUER QUELLTEXTE UND MAKEFILE ANLEGEN
	4048	# MRUN WIRD DIESES VRZEICHNIS UEBER ENVIRONMENT VARIABLE
	4049	# MITGETEILT (UEBERSTEUERT ANGABE IN KONFIGURATIONSDATEI)
	4050	echo "mkdir SOURCES_FOR_RUN_$fname" >> $jobfile
	4051	echo "export SOURCES_COMPLETE=true" >> $jobfile
	4052	echo "cd SOURCES_FOR_RUN_$fname" >> $jobfile
	4053
	4054	for filename in $source_list
	4055	do
	4056	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
	4057	echo "cat > $filename << \"%END%\"" >> $jobfile
	4058	cat $source_catalog/$filename >> $jobfile
	4059	echo " " >> $jobfile
	4060	echo "%END%" >> $jobfile
	4061	echo " " >> $jobfile
	4062	done
	4063
[1]	4064	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
[191]	4065	echo "cat > Makefile << \"%END%\"" >> $jobfile
	4066	cat $source_catalog/Makefile >> $jobfile
[1]	4067	echo " " >> $jobfile
	4068	echo "%END%" >> $jobfile
	4069	echo " " >> $jobfile
	4070
[191]	4071	echo "cd - > /dev/null" >> $jobfile
[1]	4072
[191]	4073	fi
[1]	4074
	4075
[191]	4076	# ABSPEICHERN DER KONFIGURATIONSDATEI
	4077	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
	4078	echo "cat > $config_file << \"%END%\"" >> $jobfile
	4079	cat $config_file >> $jobfile
	4080	echo "%END%" >> $jobfile
	4081	echo " " >> $jobfile
[1]	4082
	4083
[191]	4084	# ABSPEICHERN DER AKTUELLEN MRUN-VERSION
	4085	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
	4086	echo "cat > $mrun_script_name <<\"%END%\"" >> $jobfile
	4087	cat ${PALM_BIN}/$mrun_script_name >> $jobfile
	4088	echo "%END%" >> $jobfile
	4089	if [[ $host = lctit ]]
	4090	then
	4091	echo "sed 's/bin\/ksh/home2\/usr5\/mkanda\/pub\/ksh/' < $mrun_script_name > mrun_new" >> $jobfile
	4092	echo "mv mrun_new $mrun_script_name" >> $jobfile
	4093	fi
	4094	echo "chmod u+x $mrun_script_name" >> $jobfile
	4095	echo "execute_mrun=true" >> $jobfile
	4096	echo " " >> $jobfile
[1]	4097
	4098	fi
	4099
[191]	4100
[1]	4101	# EVTL. BENOETIGTE INPUT-DATEIEN PER FTP HOLEN ODER DEM JOB DIREKT
	4102	# MITGEBEN UND AUF DEM REMOTE-RECHNER IM BENUTZERVERZEICHNIS ABLEGEN
	4103	# FALLS DIESES NICHT EXISTIERT, WIRD VERSUCHT, DAS JEWEILS LETZTE
	4104	# UNTERVERZEICHNIS DES PFADNAMENS ANZULEGEN
	4105	if [[ $do_remote = true ]]
	4106	then
	4107	(( i = 0 ))
	4108	while (( i < iin ))
	4109	do
	4110	(( i = i + 1 ))
	4111	echo "[[ ! -d ${pathin[$i]} ]] && mkdir -p ${pathin[$i]}" >> $jobfile
	4112	if [[ "${transin[$i]}" = job ]]
	4113	then
	4114	echo "cat > ${remotepathin[$i]} <<\"%END%\"" >> $jobfile
	4115	eval cat ${pathin[$i]}/${frelin[$i]} >> $jobfile
	4116	echo " " >> $jobfile
	4117	echo "%END%" >> $jobfile
	4118	else
[82]	4119	echo "batch_scp -b -o -g -s -u $return_username $return_addres ${remotepathin[$i]} \"${pathin[$i]}\" ${frelin[$i]}" >> $jobfile
[1]	4120	fi
	4121
	4122	# UEBERPRUEFEN, OB DATEI ANGELEGT WERDEN KONNTE
	4123	echo "if [[ \$? = 1 ]]" >> $jobfile
	4124	echo "then" >> $jobfile
	4125	echo " echo \" \" " >> $jobfile
	4126	echo " echo \"+++ file ${remotepathin[$i]} could not be created\" " >> $jobfile
	4127	echo " echo \" please check, if directory exists on $host!\" " >> $jobfile
	4128	echo " echo \"+++ MRUN will not be continued\" " >> $jobfile
	4129	echo " execute_mrun=false" >> $jobfile
	4130	echo "fi" >> $jobfile
	4131	done
	4132	fi
	4133
	4134	# ARBEITSKATALOG AUF DER LOKALEN MASCHINE FUER EVENTUELLE
	4135	# FORTSETZUNGSLAUEFE PER ENV-VARIABLE UEBERGEBEN
	4136	echo "LOCAL_PWD=$working_directory" >> $jobfile
	4137	echo "export LOCAL_PWD" >> $jobfile
	4138
	4139	# EBENSO LOKALEN MRUN-KATALOG UEBERGEBEN
[22]	4140	echo "LOCAL_MRUN_PATH=$PALM_BIN" >> $jobfile
[1]	4141	echo "export LOCAL_MRUN_PATH" >> $jobfile
	4142
[66]	4143	# WORKAROUND FUER RIAM-NEC-JOBS WEGEN PROFILE-SCHWIERIGKEITEN
[69]	4144	if [[ $localhost_realname = "gate" \|\| $localhost = lctit ]]
[66]	4145	then
	4146	echo "export PALM_BIN=$PALM_BIN" >> $jobfile
	4147	fi
[1]	4148
	4149	# MRUN AUF ZIELRECHNER AUFRUFEN
	4150	echo "set -x" >> $jobfile
	4151	echo "[[ \$execute_mrun = true ]] && ./$mrun_com" >> $jobfile
	4152
	4153	echo 'ls -al; echo `pwd`' >> $jobfile
	4154	echo "cd \$HOME" >> $jobfile
	4155	echo "rm -rf $TEMPDIR" >> $jobfile
	4156
	4157
	4158
	4159
	4160	# JOB PER SUBJOB STARTEN
	4161	if [[ $silent = false ]]
	4162	then
	4163	printf "\n "
	4164	else
	4165	printf "\n\n"
	4166	fi
	4167
[164]	4168	subjob $job_on_file -h $host -u $remote_username -g $group_number -q $queue -m $memory -N $node_usage -t $cpumax $XOPT $TOPT $OOPT -n $fname -v -c $job_catalog $jobfile
[1]	4169	rm -rf $jobfile
	4170
	4171
	4172	fi # ENDE REMOTE-TEIL
	4173
	4174
	4175
	4176	# ENDE DER PROZEDUR

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