Changeset 562 for palm/trunk/SCRIPTS

Timestamp:

Sep 13, 2010 1:48:16 PM (14 years ago)

Author:

raasch

Message:

bugfixes for wrong netcdf/3.6.3 module, last revision 561, and setting of MPI_TYPE_DEPTH for netCDF4/HDF5 with mpt -library

Location:

palm/trunk/SCRIPTS

Files:

• mbuild (modified) (1 diff)
• mrun (modified) (2 diffs)

palm/trunk/SCRIPTS/mbuild

@@ -1196 +1196 @@
           then
              module_calls="module load ${modules};"
+
+                # bugfix for wrong netcdf module
+             if [[ $remote_host = lcsgib  ||  $remote_host = lcsgih ]]
+             then
+                if [[ $(echo $module_calls | grep -c netcdf/3.6.3-intel) != 0 ]]
+                then
+                   module_calls="$module_calls export LD_LIBRARY_PATH=/sw/dataformats/netcdf/3.6.3-intel/lib:\$LD_LIBRARY_PATH;"
+                fi
+             fi
           else
              module_calls=""

palm/trunk/SCRIPTS/mrun

@@ -2120 +2120 @@
 
     # bugfix for wrong netcdf module
- if [[ $remote_host = lcsgib  ||  $remote_host = lcsgih ]]
+ if [[ $host = lcsgib  ||  $host = lcsgih ]]
  then
     if [[ $(echo $module_calls | grep -c netcdf/3.6.3-intel) != 0 ]]
     then
-       module_calls="$module_calls export LD_LIBRARY_PATH=/sw/dataformats/netcdf/3.6.3-intel/lib:\$LD_LIBRARY_PATH;"
+       export module_calls="$module_calls export LD_LIBRARY_PATH=/sw/dataformats/netcdf/3.6.3-intel/lib:\$LD_LIBRARY_PATH;"
     fi
  fi
@@ -3299 +3299 @@
                       export MPI_CONNECTIONS_THRESHOLD=8192
                       echo "*** MPI_DSM_CPULIST=$MPI_DSM_CPULIST"
+                      export MPI_TYPE_DEPTH=20
+                      echo "*** MPI_TYPE_DEPTH=$MPI_TYPE_DEPTH"
                       mpiexec_mpt -np $ii   ./a.out  $ROPTS  < runfile_atmos