Changeset 562


Ignore:
Timestamp:
Sep 13, 2010 1:48:16 PM (11 years ago)
Author:
raasch
Message:

bugfixes for wrong netcdf/3.6.3 module, last revision 561, and setting of MPI_TYPE_DEPTH for netCDF4/HDF5 with mpt -library

Location:
palm/trunk/SCRIPTS
Files:
2 edited

Legend:

Unmodified
Added
Removed
  • palm/trunk/SCRIPTS/mbuild

    r555 r562  
    11961196          then
    11971197             module_calls="module load ${modules};"
     1198
     1199                # bugfix for wrong netcdf module
     1200             if [[ $remote_host = lcsgib  ||  $remote_host = lcsgih ]]
     1201             then
     1202                if [[ $(echo $module_calls | grep -c netcdf/3.6.3-intel) != 0 ]]
     1203                then
     1204                   module_calls="$module_calls export LD_LIBRARY_PATH=/sw/dataformats/netcdf/3.6.3-intel/lib:\$LD_LIBRARY_PATH;"
     1205                fi
     1206             fi
    11981207          else
    11991208             module_calls=""
  • palm/trunk/SCRIPTS/mrun

    r555 r562  
    21202120
    21212121    # bugfix for wrong netcdf module
    2122  if [[ $remote_host = lcsgib  ||  $remote_host = lcsgih ]]
     2122 if [[ $host = lcsgib  ||  $host = lcsgih ]]
    21232123 then
    21242124    if [[ $(echo $module_calls | grep -c netcdf/3.6.3-intel) != 0 ]]
    21252125    then
    2126        module_calls="$module_calls export LD_LIBRARY_PATH=/sw/dataformats/netcdf/3.6.3-intel/lib:\$LD_LIBRARY_PATH;"
     2126       export module_calls="$module_calls export LD_LIBRARY_PATH=/sw/dataformats/netcdf/3.6.3-intel/lib:\$LD_LIBRARY_PATH;"
    21272127    fi
    21282128 fi
     
    32993299                      export MPI_CONNECTIONS_THRESHOLD=8192
    33003300                      echo "*** MPI_DSM_CPULIST=$MPI_DSM_CPULIST"
     3301                      export MPI_TYPE_DEPTH=20
     3302                      echo "*** MPI_TYPE_DEPTH=$MPI_TYPE_DEPTH"
    33013303                      mpiexec_mpt -np $ii   ./a.out  $ROPTS  < runfile_atmos
    33023304
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