source: palm/trunk/SOURCE/palm.f90 @ 4780

Last change on this file since 4780 was 4539, checked in by raasch, 4 years ago

checks added, if index limits in header are exceeded (restart_data_mpi_io_mod), bugfix in rrd_mpi_io_int_2d, location and log_point names added/modified, cpu time per grid point and timestep does not included initialization and spinup any more (cpulog_mod)

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File size: 16.3 KB
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[4017]1! !> @file palm.f90
[2000]2!------------------------------------------------------------------------------!
[2696]3! This file is part of the PALM model system.
[1036]4!
[2000]5! PALM is free software: you can redistribute it and/or modify it under the
6! terms of the GNU General Public License as published by the Free Software
7! Foundation, either version 3 of the License, or (at your option) any later
8! version.
[1036]9!
10! PALM is distributed in the hope that it will be useful, but WITHOUT ANY
11! WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR
12! A PARTICULAR PURPOSE.  See the GNU General Public License for more details.
13!
14! You should have received a copy of the GNU General Public License along with
15! PALM. If not, see <http://www.gnu.org/licenses/>.
16!
[4360]17! Copyright 1997-2020 Leibniz Universitaet Hannover
[2000]18!------------------------------------------------------------------------------!
[1036]19!
[484]20! Current revisions:
[1]21! -----------------
[2233]22!
[4539]23!
[2233]24! Former revisions:
25! -----------------
26! $Id: palm.f90 4539 2020-05-18 14:05:17Z suehring $
[4539]27! log point name changed
28!
29! 4535 2020-05-15 12:07:23Z raasch
[4535]30! bugfix for restart data format query
31!
32! 4496 2020-04-15 08:37:26Z raasch
[4496]33! bugfix: coupling character added to restart output filename
34!
35! 4495 2020-04-13 20:11:20Z raasch
[4495]36! restart data handling with MPI-IO added
37!
38! 4457 2020-03-11 14:20:43Z raasch
[4457]39! use statement for exchange horiz added
40!
41! 4444 2020-03-05 15:59:50Z raasch
[4444]42! bugfix: cpp-directives for serial mode added
43!
44! 4414 2020-02-19 20:16:04Z suehring
[4414]45! Call to module_interface_init_numerics
46!
47! 4400 2020-02-10 20:32:41Z suehring
[4400]48! Add interface to initialize data output with dom
49!
50! 4360 2020-01-07 11:25:50Z suehring
[4227]51! implement new palm_date_time_mod
52!
53! 4094 2019-07-12 09:24:21Z gronemeier
[4182]54! Corrected "Former revisions" section
55!
56! 4039 2019-06-18 10:32:41Z suehring
[4039]57! Rename subroutines in module for diagnostic quantities
58!
59! 4017 2019-06-06 12:16:46Z schwenkel
[3994]60! new module for calculation and output of diagnostic quantities added
61!
62! 3885 2019-04-11 11:29:34Z kanani
[3885]63! Changes related to global restructuring of location messages and introduction
64! of additional debug messages
65!
66! 3761 2019-02-25 15:31:42Z raasch
[3761]67! unused variable removed
68!
69! 3719 2019-02-06 13:10:18Z kanani
[3719]70! Included cpu measurement for wall/soil spinup
71!
72! 3703 2019-01-29 16:43:53Z knoop
[3685]73! Some interface calls moved to module_interface + cleanup
74!
75! 3648 2019-01-02 16:35:46Z suehring
[3648]76! Rename subroutines for surface-data output
[3298]77!
[4182]78! Revision 1.1  1997/07/24 11:23:35  raasch
79! Initial revision
80!
81!
[1]82! Description:
83! ------------
[3232]84!> Large-Eddy Simulation (LES) model for atmospheric and oceanic boundary-layer
85!> flows
86!> see the PALM homepage https://palm-model.org for further information
[1]87!------------------------------------------------------------------------------!
[1682]88 PROGRAM palm
89 
[1]90
[1374]91    USE arrays_3d
[1]92
[4444]93#if defined( __parallel )
[3298]94    USE bulk_cloud_model_mod,                                                  &
95        ONLY: bulk_cloud_model, microphysics_morrison, microphysics_seifert
[4444]96#endif
[3298]97
[1320]98    USE control_parameters,                                                    &
[4444]99        ONLY:  coupling_char, do2d_at_begin, do3d_at_begin, io_blocks,         &
[4495]100               io_group, message_string, restart_data_format_output, runnr, simulated_time_chr, spinup,   &
[3241]101               time_since_reference_point, user_interface_current_revision,    &
102               user_interface_required_revision, version, write_binary
[1320]103
[4444]104#if defined( __parallel )
105    USE control_parameters,                                                    &
106        ONLY:  child_domain, constant_diffusion, humidity,                     &
107               initializing_actions, neutral, passive_scalar
108#endif
109
[1320]110    USE cpulog,                                                                &
[4444]111        ONLY:  cpu_log, log_point, cpu_statistics
[1320]112
[4444]113#if defined( __parallel )
114    USE cpulog,                                                                &
115        ONLY:  log_point_s
116#endif
117
[3994]118    USE diagnostic_output_quantities_mod,                                      &
[4039]119        ONLY:  doq_calculate
[3994]120
[4444]121#if defined( __parallel )
[4457]122    USE exchange_horiz_mod,                                                    &
123        ONLY:  exchange_horiz
124
[1374]125    USE indices,                                                               &
[2232]126        ONLY:  nbgp
[4444]127#endif
[1374]128
[3274]129    USE kinds
130
[3687]131    USE module_interface,                                                      &
[4414]132        ONLY:  module_interface_init_numerics,                                 &
133               module_interface_init_output,                                   &
[4400]134               module_interface_last_actions
[3687]135
[4400]136
[3235]137    USE multi_agent_system_mod,                                                &
138        ONLY:  agents_active, mas_last_actions
139
[2696]140    USE netcdf_data_input_mod,                                                 &
[3685]141        ONLY:  netcdf_data_input_inquire_file, netcdf_data_input_init,         &
[2696]142               netcdf_data_input_surface_data, netcdf_data_input_topo
143
[1]144    USE pegrid
145
[4444]146#if defined( __parallel )
[2894]147    USE pmc_particle_interface,                                                &
148        ONLY: pmcp_g_alloc_win
149
[1762]150    USE pmc_interface,                                                         &
[3241]151        ONLY:  nested_run, pmci_child_initialize, pmci_init,                   &
[3484]152               pmci_modelconfiguration, pmci_parent_initialize
[4444]153#endif
[4414]154
[4495]155    USE restart_data_mpi_io_mod,                                               &
156        ONLY:  rd_mpi_io_close, rd_mpi_io_open
157
[3648]158    USE surface_data_output_mod,                                               &
159        ONLY:  surface_data_output_last_action
[1762]160
[2894]161    USE write_restart_data_mod,                                                &
162        ONLY:  wrd_global, wrd_local
[2801]163
[4444]164#if defined( __parallel )  &&  defined( _OPENACC )
[3689]165    USE openacc
166#endif
[1747]167
[3689]168
[1]169    IMPLICIT NONE
170
171!
172!-- Local variables
[3241]173    CHARACTER(LEN=9) ::  time_to_string  !<
174    INTEGER(iwp)     ::  i               !< loop counter for blocked I/O
[3689]175#if defined( __parallel) && defined( _OPENACC )
176    INTEGER(iwp)     :: local_comm       !< local communicator (shared memory)
177    INTEGER(iwp)     :: local_num_procs  !< local number of processes
178    INTEGER(iwp)     :: local_id         !< local id
179    INTEGER(acc_device_kind) :: device_type !< device type for OpenACC
180    INTEGER(iwp)     ::  num_devices     !< number of devices visible to OpenACC
181    INTEGER(iwp)     ::  my_device       !< device used by this process
182#endif
[1]183
[3487]184    version = 'PALM 6.0'
[4495]185    user_interface_required_revision = 'r4495'
[75]186
[1]187#if defined( __parallel )
188!
189!-- MPI initialisation. comm2d is preliminary set, because
190!-- it will be defined in init_pegrid but is used before in cpu_log.
191    CALL MPI_INIT( ierr )
[1762]192
193!
194!-- Initialize the coupling for nested-domain runs
[1764]195!-- comm_palm is the communicator which includes all PEs (MPI processes)
196!-- available for this (nested) model. If it is not a nested run, comm_palm
197!-- is returned as MPI_COMM_WORLD
[2951]198    CALL cpu_log( log_point_s(70), 'pmci_init', 'start' )
[1762]199    CALL pmci_init( comm_palm )
[2951]200    CALL cpu_log( log_point_s(70), 'pmci_init', 'stop' )
[1762]201    comm2d = comm_palm
[1764]202!
203!-- Get the (preliminary) number of MPI processes and the local PE-id (in case
204!-- of a further communicator splitting in init_coupling, these numbers will
205!-- be changed in init_pegrid).
206    IF ( nested_run )  THEN
[1762]207
[1764]208       CALL MPI_COMM_SIZE( comm_palm, numprocs, ierr )
209       CALL MPI_COMM_RANK( comm_palm, myid, ierr )
[1762]210
[1764]211    ELSE
212
213       CALL MPI_COMM_SIZE( MPI_COMM_WORLD, numprocs, ierr )
214       CALL MPI_COMM_RANK( MPI_COMM_WORLD, myid, ierr )
[1]215!
[1764]216!--    Initialize PE topology in case of coupled atmosphere-ocean runs (comm_palm
217!--    will be splitted in init_coupling)
218       CALL init_coupling
219    ENDIF
[3689]220
221#ifdef _OPENACC
222!
223!-- Select OpenACC device to use in this process. For this find out how many
224!-- neighbors there are running on the same node and which id this process is.
225    IF ( nested_run )  THEN
226       CALL MPI_COMM_SPLIT_TYPE( comm_palm, MPI_COMM_TYPE_SHARED, 0,           &
227                                 MPI_INFO_NULL, local_comm, ierr )
228    ELSE
229       CALL MPI_COMM_SPLIT_TYPE( MPI_COMM_WORLD, MPI_COMM_TYPE_SHARED, 0,      &
230                                 MPI_INFO_NULL, local_comm, ierr )
231    ENDIF
232    CALL MPI_COMM_SIZE( local_comm, local_num_procs, ierr )
233    CALL MPI_COMM_RANK( local_comm, local_id, ierr )
234
235!
236!-- This loop including the barrier is a workaround for PGI compiler versions
237!-- up to and including 18.4. Later releases are able to select their GPUs in
238!-- parallel, without running into spurious errors.
239    DO i = 0, local_num_procs-1
240       CALL MPI_BARRIER( local_comm, ierr )
241
242       IF ( i == local_id )  THEN
243          device_type = acc_get_device_type()
244          num_devices = acc_get_num_devices( device_type )
245          my_device = MOD( local_id, num_devices )
246          CALL acc_set_device_num( my_device, device_type )
247       ENDIF
248    ENDDO
249
250    CALL MPI_COMM_FREE( local_comm, ierr )
[102]251#endif
[3689]252#endif
[102]253
254!
[1]255!-- Initialize measuring of the CPU-time remaining to the run
256    CALL local_tremain_ini
257
258!
259!-- Start of total CPU time measuring.
260    CALL cpu_log( log_point(1), 'total', 'start' )
261    CALL cpu_log( log_point(2), 'initialisation', 'start' )
262
263!
[206]264!-- Open a file for debug output
[1468]265    WRITE (myid_char,'(''_'',I6.6)')  myid
[206]266    OPEN( 9, FILE='DEBUG'//TRIM( coupling_char )//myid_char, FORM='FORMATTED' )
267
268!
[1]269!-- Initialize dvrp logging. Also, one PE maybe split from the global
270!-- communicator for doing the dvrp output. In that case, the number of
271!-- PEs available for PALM is reduced by one and communicator comm_palm
272!-- is changed respectively.
273#if defined( __parallel )
274    CALL MPI_COMM_RANK( comm_palm, myid, ierr )
[102]275#endif
276
277!
[108]278!-- Read control parameters from NAMELIST files and read environment-variables
279    CALL parin
280
281!
[1666]282!-- Check for the user's interface version
283    IF ( user_interface_current_revision /= user_interface_required_revision )  &
284    THEN
285       message_string = 'current user-interface revision "' //                  &
286                        TRIM( user_interface_current_revision ) // '" does ' // &
287                        'not match the required revision ' //                   &
288                        TRIM( user_interface_required_revision )
[1668]289        CALL message( 'palm', 'PA0169', 1, 2, 0, 6, 0 )
[1666]290    ENDIF
291
292!
[108]293!-- Determine processor topology and local array indices
294    CALL init_pegrid
295!
[2696]296!-- Check if input file according to input-data standard exists
297    CALL netcdf_data_input_inquire_file
298!
299!-- Read topography input data if required. This is required before the
300!-- numerical grid is finally created in init_grid
301    CALL netcdf_data_input_topo 
302!
303!-- Generate grid parameters, initialize generic topography and further process
304!-- topography information if required
[1]305    CALL init_grid
306!
[4414]307!-- Initialize boundary conditions and numerics such as the multigrid solver or
308!-- the advection routine
309    CALL module_interface_init_numerics
310!
[2696]311!-- Read global attributes if available. 
312    CALL netcdf_data_input_init 
313!
314!-- Read surface classification data, e.g. vegetation and soil types, water
315!-- surfaces, etc., if available. Some of these data is required before
316!-- check parameters is invoked.     
317    CALL netcdf_data_input_surface_data
318!
[1]319!-- Check control parameters and deduce further quantities
320    CALL check_parameters
[3298]321
[1]322    CALL init_3d_model
323
[4400]324    CALL module_interface_init_output
325
[4444]326#if defined( __parallel )
[1]327!
[1762]328!-- Coupling protocol setup for nested-domain runs
[1764]329    IF ( nested_run )  THEN
330       CALL pmci_modelconfiguration
[1781]331!
[1933]332!--    Receive and interpolate initial data on children.
333!--    Child initialization must be made first if the model is both child and
[2177]334!--    parent if necessary
335       IF ( TRIM( initializing_actions ) /= 'read_restart_data' )  THEN
336          CALL pmci_child_initialize
[1781]337!
[2177]338!--       Send initial condition data from parent to children
339          CALL pmci_parent_initialize
[1781]340!
[3232]341!--       Exchange_horiz is needed after the nest initialization
[3182]342          IF ( child_domain )  THEN
[2178]343             CALL exchange_horiz( u, nbgp )
344             CALL exchange_horiz( v, nbgp )
345             CALL exchange_horiz( w, nbgp )
346             IF ( .NOT. neutral )  THEN
347                CALL exchange_horiz( pt, nbgp )
348             ENDIF
349             IF ( .NOT. constant_diffusion )  CALL exchange_horiz( e, nbgp )
350             IF ( humidity )  THEN
351                CALL exchange_horiz( q, nbgp )
[3274]352                IF ( bulk_cloud_model  .AND.  microphysics_morrison )  THEN
[2292]353                  CALL exchange_horiz( qc, nbgp )
354                  CALL exchange_horiz( nc, nbgp )
355                ENDIF
[3274]356                IF ( bulk_cloud_model  .AND.  microphysics_seifert )  THEN
[2178]357                   CALL exchange_horiz( qr, nbgp ) 
358                   CALL exchange_horiz( nr, nbgp )
359                ENDIF
360             ENDIF
361             IF ( passive_scalar )  CALL exchange_horiz( s, nbgp )
[1933]362          ENDIF
[1781]363       ENDIF
364
[2801]365       CALL pmcp_g_alloc_win                    ! Must be called after pmci_child_initialize and pmci_parent_initialize
[1764]366    ENDIF
[4444]367#endif
[1762]368
369!
[1]370!-- Output of program header
371    IF ( myid == 0 )  CALL header
372
373    CALL cpu_log( log_point(2), 'initialisation', 'stop' )
374
375!
[2296]376!-- Integration of the non-atmospheric equations (land surface model, urban
377!-- surface model)
378    IF ( spinup )  THEN
[3719]379       CALL cpu_log( log_point(41), 'wall/soil spinup', 'start' )
[2296]380       CALL time_integration_spinup
[3719]381       CALL cpu_log( log_point(41), 'wall/soil spinup', 'stop' )
[2296]382    ENDIF
383
384!
[1]385!-- Set start time in format hh:mm:ss
[2977]386    simulated_time_chr = time_to_string( time_since_reference_point )
[1]387
388!
389!-- If required, output of initial arrays
390    IF ( do2d_at_begin )  THEN
[4039]391       CALL doq_calculate    !TODO, will be called twice
[3994]392
[1]393       CALL data_output_2d( 'xy', 0 )
394       CALL data_output_2d( 'xz', 0 )
395       CALL data_output_2d( 'yz', 0 )
396    ENDIF
[1976]397
[1]398    IF ( do3d_at_begin )  THEN
[4039]399       CALL doq_calculate    !TODO, will be called twice
[3994]400
[1]401       CALL data_output_3d( 0 )
402    ENDIF
403
404!
[495]405!-- Integration of the model equations using timestep-scheme
[1]406    CALL time_integration
407
408!
[495]409!-- If required, write binary data for restart runs
[2298]410    IF ( write_binary )  THEN
[759]411
[4539]412       CALL cpu_log( log_point(22), 'write-restart-data', 'start' )
[759]413
[3885]414       CALL location_message( 'writing restart data', 'start' )
[1402]415
[4495]416       IF ( TRIM( restart_data_format_output ) == 'fortran_binary' )  THEN
[2894]417
[4495]418          DO  i = 0, io_blocks-1
419             IF ( i == io_group )  THEN
420
[1]421!
[4495]422!--             Open binary file
423                CALL check_open( 14 )
[2894]424!
[4495]425!--             Write control parameters and other global variables for restart.
426                IF ( myid == 0 )  CALL wrd_global
[2894]427!
[4495]428!--             Write processor specific flow field data for restart runs
429                CALL wrd_local
[2894]430!
[4495]431!--             Close binary file
432                CALL close_file( 14 )
[2894]433
[4495]434             ENDIF
[759]435#if defined( __parallel )
[4495]436             CALL MPI_BARRIER( comm2d, ierr )
[759]437#endif
[4495]438          ENDDO
[759]439
[4535]440       ELSEIF ( restart_data_format_output(1:3) == 'mpi' )  THEN
[4495]441!
442!--       Open MPI-IO restart file
[4496]443          CALL rd_mpi_io_open( 'write', 'BINOUT' // TRIM( coupling_char ) )
[4495]444!
445!--       Write control parameters and other global variables for restart.
446          CALL wrd_global
447!
448!--       Write processor specific flow field data for restart runs
449          CALL wrd_local
450!
451!--       Close restart File
452          CALL rd_mpi_io_close
453
454       ENDIF
455
[3885]456       CALL location_message( 'writing restart data', 'finished' )
[1402]457
[4539]458       CALL cpu_log( log_point(22), 'write-restart-data', 'stop' )
[2007]459       
[495]460    ENDIF
[3494]461!
462!-- Last actions for surface output, for instantaneous and time-averaged data
[3648]463    CALL surface_data_output_last_action( 0 )
464    CALL surface_data_output_last_action( 1 )
[1]465
466!
467!-- If required, repeat output of header including the required CPU-time
468    IF ( myid == 0 )  CALL header
469!
[3687]470!-- Perform module specific last actions
[1]471    CALL cpu_log( log_point(4), 'last actions', 'start' )
[3235]472
[3687]473    IF ( myid == 0 .AND. agents_active ) CALL mas_last_actions ! ToDo: move to module_interface
[2894]474
[3687]475    CALL module_interface_last_actions
476
[1]477    CALL cpu_log( log_point(4), 'last actions', 'stop' )
478
479!
[3687]480!-- Close files
481    CALL close_file( 0 )
482
483!
[3232]484!-- Write run number to file (used by palmrun to create unified cycle numbers
485!-- for output files
[2261]486    IF ( myid == 0  .AND.  runnr > 0 )  THEN
487       OPEN( 90, FILE='RUN_NUMBER', FORM='FORMATTED' )
488       WRITE( 90, '(I4)' )  runnr
489       CLOSE( 90 )
490    ENDIF
491
492!
[1]493!-- Take final CPU-time for CPU-time analysis
494    CALL cpu_log( log_point(1), 'total', 'stop' )
495    CALL cpu_statistics
496
497#if defined( __parallel )
498    CALL MPI_FINALIZE( ierr )
499#endif
500
501 END PROGRAM palm
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