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source: palm/trunk/SOURCE/data_output_3d.f90 @ 4377

Last change on this file since 4377 was 4360, checked in by suehring, 5 years ago
Bugfix in output of time-averaged plant-canopy quanities; Output of plant-canopy data only where tall canopy is defined; land-surface model: fix wrong location strings; tests: update urban test case; all source code files: copyright update
Property svn:keywords set to `Id`
File size: 25.8 KB

Rev	Line
[1682]	1	!> @file data_output_3d.f90
[2000]	2	!------------------------------------------------------------------------------!
[2696]	3	! This file is part of the PALM model system.
[1036]	4	!
[2000]	5	! PALM is free software: you can redistribute it and/or modify it under the
	6	! terms of the GNU General Public License as published by the Free Software
	7	! Foundation, either version 3 of the License, or (at your option) any later
	8	! version.
[1036]	9	!
	10	! PALM is distributed in the hope that it will be useful, but WITHOUT ANY
	11	! WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR
	12	! A PARTICULAR PURPOSE. See the GNU General Public License for more details.
	13	!
	14	! You should have received a copy of the GNU General Public License along with
	15	! PALM. If not, see <http://www.gnu.org/licenses/>.
	16	!
[4360]	17	! Copyright 1997-2020 Leibniz Universitaet Hannover
[2000]	18	!------------------------------------------------------------------------------!
[1036]	19	!
[254]	20	! Current revisions:
[1106]	21	! ------------------
[3589]	22	!
	23	!
	24	! Former revisions:
	25	! -----------------
	26	! $Id: data_output_3d.f90 4360 2020-01-07 11:25:50Z gronemeier $
[4346]	27	! Introduction of wall_flags_total_0, which currently sets bits based on static
	28	! topography information used in wall_flags_static_0
	29	!
	30	! 4329 2019-12-10 15:46:36Z motisi
[4329]	31	! Renamed wall_flags_0 to wall_flags_static_0
	32	!
	33	! 4182 2019-08-22 15:20:23Z scharf
[4182]	34	! Corrected "Former revisions" section
	35	!
	36	! 4162 2019-08-16 05:54:29Z raasch
[4162]	37	! bugfix for r4155
	38	!
	39	! 4155 2019-08-14 06:25:18Z raasch
[4155]	40	! bugfix for 3d-output in serial mode (ghost points must not be written)
	41	!
	42	! 4127 2019-07-30 14:47:10Z suehring
[4127]	43	! Adjustment for top boundary index for plant-canopy model outputs
	44	! (merge from branch resler)
	45	!
	46	! 4048 2019-06-21 21:00:21Z knoop
[4048]	47	! Moved tcm_data_output_3d to module_interface
	48	!
	49	! 4039 2019-06-18 10:32:41Z suehring
[4039]	50	! modularize diagnostic output
	51	!
	52	! 3994 2019-05-22 18:08:09Z suehring
[3994]	53	! output of turbulence intensity added
	54	!
	55	! 3987 2019-05-22 09:52:13Z kanani
[3987]	56	! Introduce alternative switch for debug output during timestepping
	57	!
	58	! 3885 2019-04-11 11:29:34Z kanani
[3885]	59	! Changes related to global restructuring of location messages and introduction
	60	! of additional debug messages
	61	!
	62	! 3814 2019-03-26 08:40:31Z pavelkrc
[3766]	63	! unused variables removed
	64	!
	65	! 3655 2019-01-07 16:51:22Z knoop
[3646]	66	! Bugfix: use time_since_reference_point instead of simulated_time (relevant
	67	! when using wall/soil spinup)
[3582]	68	!
[4182]	69	! Revision 1.1 1997/09/03 06:29:36 raasch
	70	! Initial revision
	71	!
	72	!
[1]	73	! Description:
	74	! ------------
[1682]	75	!> Output of the 3D-arrays in netCDF and/or AVS format.
[1]	76	!------------------------------------------------------------------------------!
[1682]	77	SUBROUTINE data_output_3d( av )
	78
[1]	79
[1320]	80	USE arrays_3d, &
[3766]	81	ONLY: d_exner, e, p, pt, q, ql, ql_c, ql_v, s, tend, u, v, vpt, w
[3274]	82
[1]	83	USE averaging
[3274]	84
	85	USE basic_constants_and_equations_mod, &
	86	ONLY: lv_d_cp
	87
	88	USE bulk_cloud_model_mod, &
[3637]	89	ONLY: bulk_cloud_model
[3274]	90
[1320]	91	USE control_parameters, &
[3987]	92	ONLY: debug_output_timestep, &
[3885]	93	do3d, do3d_no, do3d_time_count, io_blocks, io_group, &
[4127]	94	land_surface, message_string, ntdim_3d, nz_do3d, plant_canopy, &
	95	psolver, time_since_reference_point, urban_surface, &
	96	varnamelength
[3274]	97
[1320]	98	USE cpulog, &
	99	ONLY: log_point, cpu_log
[2817]	100
[3405]	101	#if defined( __parallel )
[1320]	102	USE indices, &
[3241]	103	ONLY: nbgp, nxl, nxlg, nxr, nxrg, nyn, nyng, nys, nysg, nzb, nzt, &
[4346]	104	wall_flags_total_0
[3405]	105	#else
	106	USE indices, &
	107	ONLY: nbgp, nx, nxl, nxlg, nxr, nxrg, ny, nyn, nyng, nys, nysg, nzb, &
[4346]	108	nzt, wall_flags_total_0
[3405]	109	#endif
[3274]	110
[1320]	111	USE kinds
[3274]	112
[1551]	113	USE land_surface_model_mod, &
[2232]	114	ONLY: lsm_data_output_3d, nzb_soil, nzt_soil
[1551]	115
[3637]	116	USE module_interface, &
	117	ONLY: module_interface_data_output_3d
	118
[1783]	119	#if defined( __netcdf )
	120	USE NETCDF
	121	#endif
	122
	123	USE netcdf_interface, &
[2696]	124	ONLY: fill_value, id_set_3d, id_var_do3d, id_var_time_3d, nc_stat, &
[1783]	125	netcdf_data_format, netcdf_handle_error
[3294]	126
[1320]	127	USE particle_attributes, &
[1359]	128	ONLY: grid_particles, number_of_particles, particles, &
	129	particle_advection_start, prt_count
[3637]	130
[1]	131	USE pegrid
	132
[4127]	133	USE plant_canopy_model_mod, &
	134	ONLY: pch_index
	135
[1585]	136	USE radiation_model_mod, &
[3814]	137	ONLY: nz_urban_b, nz_urban_t
[1585]	138
[2007]	139	USE urban_surface_mod, &
[2696]	140	ONLY: usm_data_output_3d
[1585]	141
[2007]	142
[1]	143	IMPLICIT NONE
	144
[3554]	145	INTEGER(iwp) :: av !< flag for (non-)average output
[2696]	146	INTEGER(iwp) :: flag_nr !< number of masking flag
[3554]	147	INTEGER(iwp) :: i !< loop index
	148	INTEGER(iwp) :: ivar !< variable index
	149	INTEGER(iwp) :: j !< loop index
	150	INTEGER(iwp) :: k !< loop index
	151	INTEGER(iwp) :: n !< loop index
[1682]	152	INTEGER(iwp) :: nzb_do !< vertical lower limit for data output
	153	INTEGER(iwp) :: nzt_do !< vertical upper limit for data output
[1]	154
[3554]	155	LOGICAL :: found !< true if output variable was found
	156	LOGICAL :: resorted !< true if variable is resorted
[1]	157
[3554]	158	REAL(wp) :: mean_r !< mean particle radius
	159	REAL(wp) :: s_r2 !< sum( particle-radius**2 )
	160	REAL(wp) :: s_r3 !< sum( particle-radius**3 )
[1]	161
[3554]	162	REAL(sp), DIMENSION(:,:,:), ALLOCATABLE :: local_pf !< output array
[1]	163
[3554]	164	REAL(wp), DIMENSION(:,:,:), POINTER :: to_be_resorted !< pointer to array which shall be output
[1]	165
[2011]	166	CHARACTER (LEN=varnamelength) :: trimvar !< TRIM of output-variable string
[2007]	167
[1]	168	!
	169	!-- Return, if nothing to output
	170	IF ( do3d_no(av) == 0 ) RETURN
	171
[3987]	172	IF ( debug_output_timestep ) CALL debug_message( 'data_output_3d', 'start' )
[3885]	173
[1]	174	CALL cpu_log (log_point(14),'data_output_3d','start')
	175
	176	!
	177	!-- Open output file.
[2512]	178	!-- For classic or 64bit netCDF output on more than one PE, each PE opens its
	179	!-- own file and writes the data of its subdomain in binary format. After the
	180	!-- run, these files are combined to one NetCDF file by combine_plot_fields.
[1031]	181	!-- For netCDF4/HDF5 output, data is written in parallel into one file.
[1327]	182	IF ( netcdf_data_format < 5 ) THEN
[2967]	183	#if defined( __parallel )
[1327]	184	CALL check_open( 30 )
[2967]	185	#endif
[1327]	186	IF ( myid == 0 ) CALL check_open( 106+av*10 )
[493]	187	ELSE
[1327]	188	CALL check_open( 106+av*10 )
[493]	189	ENDIF
[1]	190
	191	!
[1745]	192	!-- For parallel netcdf output the time axis must be limited. Return, if this
	193	!-- limit is exceeded. This could be the case, if the simulated time exceeds
	194	!-- the given end time by the length of the given output interval.
	195	IF ( netcdf_data_format > 4 ) THEN
	196	IF ( do3d_time_count(av) + 1 > ntdim_3d(av) ) THEN
[3646]	197	WRITE ( message_string, * ) 'Output of 3d data is not given at t=', &
	198	time_since_reference_point, 's because the maximum ', &
	199	'number of output time levels is ', &
[1745]	200	'exceeded.'
	201	CALL message( 'data_output_3d', 'PA0387', 0, 1, 0, 6, 0 )
	202	CALL cpu_log( log_point(14), 'data_output_3d', 'stop' )
	203	RETURN
	204	ENDIF
	205	ENDIF
	206
	207	!
[1031]	208	!-- Update the netCDF time axis
[1308]	209	!-- In case of parallel output, this is only done by PE0 to increase the
	210	!-- performance.
[1]	211	#if defined( __netcdf )
[1308]	212	do3d_time_count(av) = do3d_time_count(av) + 1
	213	IF ( myid == 0 ) THEN
[1327]	214	nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_time_3d(av), &
	215	(/ time_since_reference_point /), &
	216	start = (/ do3d_time_count(av) /), &
	217	count = (/ 1 /) )
[1783]	218	CALL netcdf_handle_error( 'data_output_3d', 376 )
[1]	219	ENDIF
	220	#endif
	221
	222	!
	223	!-- Loop over all variables to be written.
[3554]	224	ivar = 1
[1]	225
[3554]	226	DO WHILE ( do3d(av,ivar)(1:1) /= ' ' )
[2007]	227
[1]	228	!
[3637]	229	!-- Initiate found flag and resorting flag
	230	found = .FALSE.
	231	resorted = .FALSE.
[4127]	232	trimvar = TRIM( do3d(av,ivar) )
	233
[3637]	234	!
	235	!-- Temporary solution to account for data output within the new urban
[2007]	236	!-- surface model (urban_surface_mod.f90), see also SELECT CASE ( trimvar ).
[1]	237	!-- Store the array chosen on the temporary array.
[3637]	238	nzb_do = nzb
[4127]	239	!
	240	!-- Set top index for 3D output. Note in case of plant-canopy model
	241	!-- these index is determined by pch_index.
	242	IF ( plant_canopy .AND. trimvar(1:4) == 'pcm_' ) THEN
	243	nzt_do = pch_index
	244	ELSE
	245	nzt_do = nz_do3d
	246	ENDIF
[3637]	247
[1551]	248	!
	249	!-- Allocate a temporary array with the desired output dimensions.
[2512]	250	ALLOCATE( local_pf(nxl:nxr,nys:nyn,nzb_do:nzt_do) )
[2696]	251	!
	252	!-- Before each output, set array local_pf to fill value
	253	local_pf = fill_value
	254	!
	255	!-- Set masking flag for topography for not resorted arrays
	256	flag_nr = 0
[1551]	257
[2007]	258	SELECT CASE ( trimvar )
[1]	259
	260	CASE ( 'e' )
	261	IF ( av == 0 ) THEN
	262	to_be_resorted => e
	263	ELSE
[3004]	264	IF ( .NOT. ALLOCATED( e_av ) ) THEN
	265	ALLOCATE( e_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
	266	e_av = REAL( fill_value, KIND = wp )
	267	ENDIF
[1]	268	to_be_resorted => e_av
	269	ENDIF
	270
[3421]	271	CASE ( 'thetal' )
[771]	272	IF ( av == 0 ) THEN
	273	to_be_resorted => pt
	274	ELSE
[3004]	275	IF ( .NOT. ALLOCATED( lpt_av ) ) THEN
	276	ALLOCATE( lpt_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
	277	lpt_av = REAL( fill_value, KIND = wp )
	278	ENDIF
[771]	279	to_be_resorted => lpt_av
	280	ENDIF
	281
[1]	282	CASE ( 'p' )
	283	IF ( av == 0 ) THEN
[727]	284	IF ( psolver /= 'sor' ) CALL exchange_horiz( p, nbgp )
[1]	285	to_be_resorted => p
	286	ELSE
[3004]	287	IF ( .NOT. ALLOCATED( p_av ) ) THEN
	288	ALLOCATE( p_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
	289	p_av = REAL( fill_value, KIND = wp )
	290	ENDIF
[727]	291	IF ( psolver /= 'sor' ) CALL exchange_horiz( p_av, nbgp )
[1]	292	to_be_resorted => p_av
	293	ENDIF
	294
	295	CASE ( 'pc' ) ! particle concentration (requires ghostpoint exchange)
	296	IF ( av == 0 ) THEN
[3646]	297	IF ( time_since_reference_point >= particle_advection_start ) THEN
[1359]	298	tend = prt_count
	299	ELSE
	300	tend = 0.0_wp
	301	ENDIF
[2512]	302	DO i = nxl, nxr
	303	DO j = nys, nyn
[1551]	304	DO k = nzb_do, nzt_do
[1]	305	local_pf(i,j,k) = tend(k,j,i)
	306	ENDDO
	307	ENDDO
	308	ENDDO
	309	resorted = .TRUE.
	310	ELSE
[3004]	311	IF ( .NOT. ALLOCATED( pc_av ) ) THEN
	312	ALLOCATE( pc_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
	313	pc_av = REAL( fill_value, KIND = wp )
	314	ENDIF
[1]	315	to_be_resorted => pc_av
	316	ENDIF
	317
[1359]	318	CASE ( 'pr' ) ! mean particle radius (effective radius)
[1]	319	IF ( av == 0 ) THEN
[3646]	320	IF ( time_since_reference_point >= particle_advection_start ) THEN
[1359]	321	DO i = nxl, nxr
	322	DO j = nys, nyn
[1551]	323	DO k = nzb_do, nzt_do
[1359]	324	number_of_particles = prt_count(k,j,i)
	325	IF (number_of_particles <= 0) CYCLE
	326	particles => grid_particles(k,j,i)%particles(1:number_of_particles)
	327	s_r2 = 0.0_wp
	328	s_r3 = 0.0_wp
	329	DO n = 1, number_of_particles
	330	IF ( particles(n)%particle_mask ) THEN
	331	s_r2 = s_r2 + particles(n)%radius*2 &
	332	particles(n)%weight_factor
	333	s_r3 = s_r3 + particles(n)%radius*3 &
	334	particles(n)%weight_factor
	335	ENDIF
	336	ENDDO
	337	IF ( s_r2 > 0.0_wp ) THEN
	338	mean_r = s_r3 / s_r2
	339	ELSE
	340	mean_r = 0.0_wp
	341	ENDIF
	342	tend(k,j,i) = mean_r
[1]	343	ENDDO
	344	ENDDO
	345	ENDDO
[1359]	346	ELSE
	347	tend = 0.0_wp
	348	ENDIF
[2512]	349	DO i = nxl, nxr
	350	DO j = nys, nyn
[1551]	351	DO k = nzb_do, nzt_do
[1]	352	local_pf(i,j,k) = tend(k,j,i)
	353	ENDDO
	354	ENDDO
	355	ENDDO
	356	resorted = .TRUE.
	357	ELSE
[3004]	358	IF ( .NOT. ALLOCATED( pr_av ) ) THEN
	359	ALLOCATE( pr_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
	360	pr_av = REAL( fill_value, KIND = wp )
	361	ENDIF
[1]	362	to_be_resorted => pr_av
	363	ENDIF
	364
[3421]	365	CASE ( 'theta' )
[1]	366	IF ( av == 0 ) THEN
[3274]	367	IF ( .NOT. bulk_cloud_model ) THEN
[1]	368	to_be_resorted => pt
	369	ELSE
[2512]	370	DO i = nxl, nxr
	371	DO j = nys, nyn
[1551]	372	DO k = nzb_do, nzt_do
[3274]	373	local_pf(i,j,k) = pt(k,j,i) + lv_d_cp * &
	374	d_exner(k) * &
[1]	375	ql(k,j,i)
	376	ENDDO
	377	ENDDO
	378	ENDDO
	379	resorted = .TRUE.
	380	ENDIF
	381	ELSE
[3004]	382	IF ( .NOT. ALLOCATED( pt_av ) ) THEN
	383	ALLOCATE( pt_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
	384	pt_av = REAL( fill_value, KIND = wp )
	385	ENDIF
[1]	386	to_be_resorted => pt_av
	387	ENDIF
	388
	389	CASE ( 'q' )
	390	IF ( av == 0 ) THEN
	391	to_be_resorted => q
	392	ELSE
[3004]	393	IF ( .NOT. ALLOCATED( q_av ) ) THEN
	394	ALLOCATE( q_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
	395	q_av = REAL( fill_value, KIND = wp )
	396	ENDIF
[1]	397	to_be_resorted => q_av
	398	ENDIF
[691]	399
[1053]	400	CASE ( 'ql' )
	401	IF ( av == 0 ) THEN
[1115]	402	to_be_resorted => ql
[1053]	403	ELSE
[3004]	404	IF ( .NOT. ALLOCATED( ql_av ) ) THEN
	405	ALLOCATE( ql_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
	406	ql_av = REAL( fill_value, KIND = wp )
	407	ENDIF
[1115]	408	to_be_resorted => ql_av
[1053]	409	ENDIF
	410
[1]	411	CASE ( 'ql_c' )
	412	IF ( av == 0 ) THEN
	413	to_be_resorted => ql_c
	414	ELSE
[3004]	415	IF ( .NOT. ALLOCATED( ql_c_av ) ) THEN
	416	ALLOCATE( ql_c_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
	417	ql_c_av = REAL( fill_value, KIND = wp )
	418	ENDIF
[1]	419	to_be_resorted => ql_c_av
	420	ENDIF
	421
	422	CASE ( 'ql_v' )
	423	IF ( av == 0 ) THEN
	424	to_be_resorted => ql_v
	425	ELSE
[3004]	426	IF ( .NOT. ALLOCATED( ql_v_av ) ) THEN
	427	ALLOCATE( ql_v_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
	428	ql_v_av = REAL( fill_value, KIND = wp )
	429	ENDIF
[1]	430	to_be_resorted => ql_v_av
	431	ENDIF
	432
	433	CASE ( 'ql_vp' )
	434	IF ( av == 0 ) THEN
[3646]	435	IF ( time_since_reference_point >= particle_advection_start ) THEN
[1359]	436	DO i = nxl, nxr
	437	DO j = nys, nyn
[1551]	438	DO k = nzb_do, nzt_do
[1359]	439	number_of_particles = prt_count(k,j,i)
	440	IF (number_of_particles <= 0) CYCLE
	441	particles => grid_particles(k,j,i)%particles(1:number_of_particles)
	442	DO n = 1, number_of_particles
	443	IF ( particles(n)%particle_mask ) THEN
	444	tend(k,j,i) = tend(k,j,i) + &
	445	particles(n)%weight_factor / &
	446	prt_count(k,j,i)
	447	ENDIF
	448	ENDDO
[1007]	449	ENDDO
	450	ENDDO
	451	ENDDO
[1359]	452	ELSE
	453	tend = 0.0_wp
	454	ENDIF
[2512]	455	DO i = nxl, nxr
	456	DO j = nys, nyn
[1551]	457	DO k = nzb_do, nzt_do
[1007]	458	local_pf(i,j,k) = tend(k,j,i)
	459	ENDDO
	460	ENDDO
	461	ENDDO
	462	resorted = .TRUE.
[1]	463	ELSE
[3004]	464	IF ( .NOT. ALLOCATED( ql_vp_av ) ) THEN
	465	ALLOCATE( ql_vp_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
	466	ql_vp_av = REAL( fill_value, KIND = wp )
	467	ENDIF
[1]	468	to_be_resorted => ql_vp_av
	469	ENDIF
	470
	471	CASE ( 'qv' )
	472	IF ( av == 0 ) THEN
[2512]	473	DO i = nxl, nxr
	474	DO j = nys, nyn
[1551]	475	DO k = nzb_do, nzt_do
[1]	476	local_pf(i,j,k) = q(k,j,i) - ql(k,j,i)
	477	ENDDO
	478	ENDDO
	479	ENDDO
	480	resorted = .TRUE.
	481	ELSE
[3004]	482	IF ( .NOT. ALLOCATED( qv_av ) ) THEN
	483	ALLOCATE( qv_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
	484	qv_av = REAL( fill_value, KIND = wp )
	485	ENDIF
[1]	486	to_be_resorted => qv_av
	487	ENDIF
	488
	489	CASE ( 's' )
	490	IF ( av == 0 ) THEN
[1960]	491	to_be_resorted => s
[1]	492	ELSE
[3004]	493	IF ( .NOT. ALLOCATED( s_av ) ) THEN
	494	ALLOCATE( s_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
	495	s_av = REAL( fill_value, KIND = wp )
	496	ENDIF
[355]	497	to_be_resorted => s_av
[1]	498	ENDIF
[691]	499
[1]	500	CASE ( 'u' )
[2696]	501	flag_nr = 1
[1]	502	IF ( av == 0 ) THEN
	503	to_be_resorted => u
	504	ELSE
[3004]	505	IF ( .NOT. ALLOCATED( u_av ) ) THEN
	506	ALLOCATE( u_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
	507	u_av = REAL( fill_value, KIND = wp )
	508	ENDIF
[1]	509	to_be_resorted => u_av
	510	ENDIF
	511
	512	CASE ( 'v' )
[2696]	513	flag_nr = 2
[1]	514	IF ( av == 0 ) THEN
	515	to_be_resorted => v
	516	ELSE
[3004]	517	IF ( .NOT. ALLOCATED( v_av ) ) THEN
	518	ALLOCATE( v_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
	519	v_av = REAL( fill_value, KIND = wp )
	520	ENDIF
[1]	521	to_be_resorted => v_av
	522	ENDIF
	523
[3421]	524	CASE ( 'thetav' )
[1]	525	IF ( av == 0 ) THEN
	526	to_be_resorted => vpt
	527	ELSE
[3004]	528	IF ( .NOT. ALLOCATED( vpt_av ) ) THEN
	529	ALLOCATE( vpt_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
	530	vpt_av = REAL( fill_value, KIND = wp )
	531	ENDIF
[1]	532	to_be_resorted => vpt_av
	533	ENDIF
	534
	535	CASE ( 'w' )
[2696]	536	flag_nr = 3
[1]	537	IF ( av == 0 ) THEN
	538	to_be_resorted => w
	539	ELSE
[3004]	540	IF ( .NOT. ALLOCATED( w_av ) ) THEN
	541	ALLOCATE( w_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
	542	w_av = REAL( fill_value, KIND = wp )
	543	ENDIF
[1]	544	to_be_resorted => w_av
	545	ENDIF
	546
	547	CASE DEFAULT
[3637]	548	!
	549	!-- Quantities of other modules
	550	IF ( .NOT. found ) THEN
	551	CALL module_interface_data_output_3d( &
	552	av, trimvar, found, local_pf, &
	553	fill_value, resorted, nzb_do, nzt_do &
	554	)
[3294]	555	ENDIF
	556
[1972]	557	!
[3637]	558	!-- Temporary workaround: ToDo: refactor local_pf allocation
	559	IF ( .NOT. found .AND. urban_surface .AND. trimvar(1:4) == 'usm_' ) THEN
	560	!
	561	!-- For urban model quantities, it is required to re-allocate local_pf
[3814]	562	nzb_do = nz_urban_b
	563	nzt_do = nz_urban_t
[1972]	564
	565	DEALLOCATE ( local_pf )
[2512]	566	ALLOCATE( local_pf(nxl:nxr,nys:nyn,nzb_do:nzt_do) )
[2696]	567	local_pf = fill_value
[1972]	568
[3637]	569	CALL usm_data_output_3d( av, trimvar, found, local_pf, &
	570	nzb_do, nzt_do )
[1972]	571	resorted = .TRUE.
[1976]	572
	573	!
	574	!-- If no soil model variable was found, re-allocate local_pf
	575	IF ( .NOT. found ) THEN
	576	nzb_do = nzb
	577	nzt_do = nz_do3d
	578
	579	DEALLOCATE ( local_pf )
[3637]	580	ALLOCATE( local_pf(nxl:nxr,nys:nyn,nzb_do:nzt_do) )
[1976]	581	ENDIF
	582
[1972]	583	ENDIF
	584
[3637]	585	!
	586	!-- Temporary workaround: ToDo: refactor local_pf allocation
	587	IF ( .NOT. found .AND. land_surface ) THEN
	588	!
	589	!-- For soil model quantities, it is required to re-allocate local_pf
	590	nzb_do = nzb_soil
	591	nzt_do = nzt_soil
[1976]	592
[3637]	593	DEALLOCATE ( local_pf )
	594	ALLOCATE( local_pf(nxl:nxr,nys:nyn,nzb_do:nzt_do) )
	595	local_pf = fill_value
[2817]	596
[3637]	597	CALL lsm_data_output_3d( av, trimvar, found, local_pf )
[2696]	598	resorted = .TRUE.
	599
[3467]	600	!
[3637]	601	!-- If no soil model variable was found, re-allocate local_pf
	602	IF ( .NOT. found ) THEN
	603	nzb_do = nzb
	604	nzt_do = nz_do3d
[2209]	605
[3637]	606	DEALLOCATE ( local_pf )
	607	ALLOCATE( local_pf(nxl:nxr,nys:nyn,nzb_do:nzt_do) )
	608	ENDIF
[3448]	609
[1972]	610	ENDIF
[1]	611
[254]	612	IF ( .NOT. found ) THEN
[1320]	613	message_string = 'no output available for: ' // &
[3554]	614	TRIM( do3d(av,ivar) )
[254]	615	CALL message( 'data_output_3d', 'PA0182', 0, 0, 0, 6, 0 )
[1]	616	ENDIF
	617
	618	END SELECT
	619
	620	!
	621	!-- Resort the array to be output, if not done above
	622	IF ( .NOT. resorted ) THEN
[2512]	623	DO i = nxl, nxr
	624	DO j = nys, nyn
[1551]	625	DO k = nzb_do, nzt_do
[2696]	626	local_pf(i,j,k) = MERGE( &
	627	to_be_resorted(k,j,i), &
	628	REAL( fill_value, KIND = wp ), &
[4346]	629	BTEST( wall_flags_total_0(k,j,i), flag_nr ) )
[1]	630	ENDDO
	631	ENDDO
	632	ENDDO
	633	ENDIF
	634
	635	!
[1327]	636	!-- Output of the 3D-array
	637	#if defined( __parallel )
	638	IF ( netcdf_data_format < 5 ) THEN
[1]	639	!
[1327]	640	!-- Non-parallel netCDF output. Data is output in parallel in
	641	!-- FORTRAN binary format here, and later collected into one file by
	642	!-- combine_plot_fields
	643	IF ( myid == 0 ) THEN
	644	WRITE ( 30 ) time_since_reference_point, &
	645	do3d_time_count(av), av
[1]	646	ENDIF
[1327]	647	DO i = 0, io_blocks-1
	648	IF ( i == io_group ) THEN
[2512]	649	WRITE ( 30 ) nxl, nxr, nys, nyn, nzb_do, nzt_do
[1551]	650	WRITE ( 30 ) local_pf(:,:,nzb_do:nzt_do)
[1327]	651	ENDIF
[1972]	652
[1327]	653	CALL MPI_BARRIER( comm2d, ierr )
[1972]	654
[1327]	655	ENDDO
[559]	656
[1327]	657	ELSE
[646]	658	#if defined( __netcdf )
[493]	659	!
[1327]	660	!-- Parallel output in netCDF4/HDF5 format.
[2512]	661	! IF ( nxr == nx .AND. nyn /= ny ) THEN
[3554]	662	! nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,ivar), &
[2512]	663	! local_pf(nxl:nxr+1,nys:nyn,nzb_do:nzt_do), &
	664	! start = (/ nxl+1, nys+1, nzb_do+1, do3d_time_count(av) /), &
	665	! count = (/ nxr-nxl+2, nyn-nys+1, nzt_do-nzb_do+1, 1 /) )
	666	! ELSEIF ( nxr /= nx .AND. nyn == ny ) THEN
[3554]	667	! nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,ivar), &
[2512]	668	! local_pf(nxl:nxr,nys:nyn+1,nzb_do:nzt_do), &
	669	! start = (/ nxl+1, nys+1, nzb_do+1, do3d_time_count(av) /), &
	670	! count = (/ nxr-nxl+1, nyn-nys+2, nzt_do-nzb_do+1, 1 /) )
	671	! ELSEIF ( nxr == nx .AND. nyn == ny ) THEN
[3554]	672	! nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,ivar), &
[2512]	673	! local_pf(nxl:nxr+1,nys:nyn+1,nzb_do:nzt_do ), &
	674	! start = (/ nxl+1, nys+1, nzb_do+1, do3d_time_count(av) /), &
	675	! count = (/ nxr-nxl+2, nyn-nys+2, nzt_do-nzb_do+1, 1 /) )
	676	! ELSE
[3554]	677	nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,ivar), &
[1551]	678	local_pf(nxl:nxr,nys:nyn,nzb_do:nzt_do), &
	679	start = (/ nxl+1, nys+1, nzb_do+1, do3d_time_count(av) /), &
	680	count = (/ nxr-nxl+1, nyn-nys+1, nzt_do-nzb_do+1, 1 /) )
[2512]	681	! ENDIF
[1783]	682	CALL netcdf_handle_error( 'data_output_3d', 386 )
[646]	683	#endif
[1327]	684	ENDIF
[1]	685	#else
	686	#if defined( __netcdf )
[3554]	687	nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,ivar), &
[4155]	688	local_pf(nxl:nxr,nys:nyn,nzb_do:nzt_do), &
	689	start = (/ 1, 1, 1, do3d_time_count(av) /), &
[4162]	690	count = (/ nx+1, ny+1, nzt_do-nzb_do+1, 1 /) )
[1783]	691	CALL netcdf_handle_error( 'data_output_3d', 446 )
[1]	692	#endif
	693	#endif
	694
[3554]	695	ivar = ivar + 1
[1]	696
	697	!
[1551]	698	!-- Deallocate temporary array
	699	DEALLOCATE ( local_pf )
[1]	700
[1551]	701	ENDDO
[1]	702
[1318]	703	CALL cpu_log( log_point(14), 'data_output_3d', 'stop' )
[1]	704
[3987]	705	IF ( debug_output_timestep ) CALL debug_message( 'data_output_3d', 'end' )
[3885]	706
[3987]	707
[1]	708	END SUBROUTINE data_output_3d

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