Home

Context Navigation

source: palm/trunk/SCRIPTS/subjob @ 2258

Last change on this file since 2258 was 2257, checked in by witha, 7 years ago
Bugfix in PALM-WTM, modifications for lceddy
Property svn:keywords set to `Id Rev`
File size: 56.2 KB

Rev	Line
[1841]	1	#!/bin/bash
[1090]	2
	3	# subjob - script for automatic generation and submission of batch-job files
	4	# for various batch queuing systems
	5
[1046]	6	#--------------------------------------------------------------------------------#
	7	# This file is part of PALM.
	8	#
	9	# PALM is free software: you can redistribute it and/or modify it under the terms
	10	# of the GNU General Public License as published by the Free Software Foundation,
	11	# either version 3 of the License, or (at your option) any later version.
	12	#
	13	# PALM is distributed in the hope that it will be useful, but WITHOUT ANY
	14	# WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR
	15	# A PARTICULAR PURPOSE. See the GNU General Public License for more details.
	16	#
	17	# You should have received a copy of the GNU General Public License along with
	18	# PALM. If not, see <http://www.gnu.org/licenses/>.
	19	#
[1310]	20	# Copyright 1997-2014 Leibniz Universitaet Hannover
[1046]	21	#--------------------------------------------------------------------------------#
	22	#
	23	# Current revisions:
[1090]	24	# ------------------
[1351]	25	#
[2188]	26	#
[1046]	27	# Former revisions:
	28	# -----------------
[169]	29	# $Id: subjob 2257 2017-06-07 14:07:05Z suehring $
[2257]	30	# adjustments for lceddy, removed lcflow-specific code
	31	#
	32	# 2188 2017-03-21 06:42:42Z raasch
[1623]	33	#
[2188]	34	# 2187 2017-03-21 06:41:25Z raasch
	35	# adjustment of compute node names for lckyuh
	36	#
[2186]	37	# 2184 2017-03-21 04:31:22Z raasch
	38	# bugfix: localhost renamed local_host
	39	#
[2150]	40	# 2148 2017-02-09 16:56:42Z scharf
	41	# added kuma and gharbi to the list of known hosts
	42	#
[2135]	43	# 2134 2017-02-02 07:33:46Z raasch
	44	# option -E added to msub commands on HLRN-III machines to allow output of more
	45	# job informations in the job protocol files
	46	#
[1945]	47	# 1944 2016-06-15 06:29:00Z raasch
	48	# adjustments for using HLRN ssh-keys
	49	#
[1941]	50	# 1940 2016-06-14 05:15:20Z raasch
	51	# adjustments for lckiaps
	52	#
[1867]	53	# 1866 2016-04-15 06:50:59Z raasch
	54	# adjusted for lcocean
	55	#
[1842]	56	# 1841 2016-04-07 19:14:06Z raasch
	57	# script now running under bash
	58	#
[1702]	59	# 1701 2015-11-02 07:43:04Z maronga
	60	# Bugfix: added missing init_cmds for lccrayh/lccrayb
	61	#
[1623]	62	# 1621 2015-07-17 11:39:33Z heinze
[1621]	63	# adjustments for Mistral at DKRZ Hamburg (lcbullhh)
[1200]	64	#
[1576]	65	# 1575 2015-03-27 09:56:27Z raasch
	66	# mpp2-queues added to lccrayh
	67	#
[1548]	68	# 1547 2015-01-29 15:09:12Z witha
	69	# adjustments for ForWind computing cluster (lcflow)
	70	#
[1546]	71	# 1545 2015-01-29 06:52:23Z heinze
	72	# local host name for blizzard further specified
	73	#
[1481]	74	# 1480 2014-10-17 14:41:49Z raasch
	75	# adjustments for 2nd stage of HLRNIII
	76	#
[1469]	77	# 1468 2014-09-24 14:06:57Z maronga
	78	# Typo removed (addres->address)
	79	# Adjustments for lcxe6
	80	#
[1453]	81	# 1452 2014-08-22 09:41:06Z heinze
	82	# local hosts for blizzard added
	83	#
[1451]	84	# 1450 2014-08-21 07:31:51Z heinze
	85	# HLRN-III (lccrayb): testq queue adjusted to mpp1testq
	86	#
[1443]	87	# 1442 2014-07-28 07:09:10Z raasch
	88	# HLRN-III (lccrayb/lccrayh) queues adjusted
	89	#
[1379]	90	# 1378 2014-04-28 06:04:58Z raasch
	91	# -et option added for lctit
	92	#
[1351]	93	# 1350 2014-04-04 13:01:30Z maronga
	94	# location of qsub updated for lcxe6
	95	#
[1290]	96	# 1289 2014-03-04 07:12:34Z raasch
	97	# German comments translated to English
	98	# fimm-, necriam-, scirocco-, ibmy-, and sgi-specific code removed
	99	#
[1280]	100	# 1279 2014-01-28 12:10:14Z raasch
	101	# node calculation modified due to changes in mrun (tasks_per_node must not be
	102	# an integral divisor of numprocs any more)
	103	#
[1275]	104	# 1274 2014-01-09 13:14:54Z heinze
	105	# adjustments for lccrayh
	106	#
[1267]	107	# 1266 2013-12-11 12:07:34Z heinze
	108	# further adjustments for lccrayb (use msub instead of qsub)
	109	#
[1265]	110	# 1264 2013-12-09 12:46:09Z fricke
	111	# Bugfix: Using number of nodes instead of number of processors (lccrayb)
	112	#
[1263]	113	# 1262 2013-12-09 10:57:20Z fricke
	114	# further adjustments for lccrayb
	115	#
[1261]	116	# 1260 2013-12-04 12:48:04Z raasch
	117	# jaboticaba admitted
	118	#
[1256]	119	# 1255 2013-11-07 14:43:35Z raasch
	120	# further adjustments for lccrayb
	121	#
[1225]	122	# 1224 2013-09-16 07:27:23Z raasch
	123	# first adjustments for lccrayb
	124	#
[1203]	125	# 1202 2013-07-10 16:22:07Z witha
	126	# adjustments for Forwind cluster (lcflow)
	127	#
[1200]	128	# 1199 2013-07-05 14:52:22Z raasch
	129	# adjustments for CSC Helsinki (lccrayf)
	130	#
[1185]	131	# use of cluster/express queue enabled (ibmh)
	132	# vinessa added (imuk)
[1047]	133	#
[1104]	134	# 1103 2013-02-20 02:15:53Z raasch
	135	# bash compatibility adjustments (usage of OPTIND, output formatting with printf
	136	# instead typeset -L/R),
	137	# further adjustments for lckyuh
	138	#
[1100]	139	# 2013-02-10 01:47:43Z raasch
	140	# adjustments for Kyushu-Univeristy computing center (lckyuh - hayaka)
	141	# and for Forwind cluster (lcflow)
	142	#
[1096]	143	# 1094 2013-02-03 01:52:12Z raasch
	144	# new option -P for explicit setting of ssh/scp port,
	145	# decalpha parts (yonsei) removed
	146	#
[1091]	147	# 2013-02-02 07:06:13Z raasch
[1099]	148	# adjustments for Kyushu-University computing center (lckyut - tatara)
[1091]	149	# old changelog messages removed
	150	#
[1047]	151	# 1046 2012-11-09 14:38:45Z maronga
	152	# code put under GPL (PALM 3.9)
	153	#
[1090]	154	# 08/07/94 - Siggi - first version finished
	155	# 29/06/94 - Siggi - script development started
	156	#--------------------------------------------------------------------------------#
	157	# subjob - script for automatic generation and submission of batch-job files
	158	# for various batch queuing systems
	159	#--------------------------------------------------------------------------------#
[1]	160
	161
[1289]	162	# VARIABLE-DECLARATIONS AND DEFAULT VALUES
[352]	163	delete_dayfile=false
[799]	164	email_notification=none
[122]	165	group_number=none
[1]	166	locat=normal
	167	no_default_queue=none
	168	no_submit=false
	169	job_catalog="~/job_queue"
	170	job_name=none
	171	local_user=$LOGNAME
	172	node_usage=shared
[475]	173	numprocs=0
[1]	174	punkte="..........................................................."
	175	submcom=qsub
	176	queue=default
	177	remote_host=none
	178	remote_user=""
	179	verify=true
	180
	181	typeset -i cputime=0 memory=0 Memory=0 minuten resttime sekunden stunden
[1779]	182	typeset -i numprocs mpi_tasks=0 nodes=0 processes_per_node=0 tasks_per_node=0 threads_per_task=1
[1]	183
	184
	185
[1289]	186	# ERROR HANDLING
	187	# IN CASE OF EXIT:
[1]	188	trap 'if [[ $locat != normal ]]
	189	then
	190	case $locat in
	191	(option) printf "\n --> available optios can be displayed"
	192	printf " by typing:"
	193	printf "\n \"subjob ?\" \n";;
	194	(ftpcopy\|parameter\|scp\|verify) printf "\n";;
	195	(*) printf "\n +++ unknown error"
	196	printf "\n please inform S. Raasch!\n"
	197	esac
	198	[[ -f $job_to_send ]] && rm $job_to_send
	199	printf "\n\n+++ SUBJOB killed \n\n"
	200	fi' exit
	201
	202
[1289]	203	# IN CASE OF TERMINAL-BREAK:
[1]	204	trap '[[ -f $job_to_send ]] && rm $job_to_send
	205	printf "\n\n+++ SUBJOB killed \n\n"
	206	exit
	207	' 2
	208
	209
[1289]	210	# DETERMINE NAME OF LOCAL HOST
[1]	211	local_host=$(hostname)
	212
[1289]	213	# SET HOST-SPECIFIC VARIABLES VEREINBAREN (CHECK, IF LOCAL HOST
	214	# IS ADMITTED AT ALL)
	215	# NOTE: ONE OF THE ENTRIES FOR "lck" OR "lckordi" ALWAYS HAS TO BE
	216	# COMMENT OUT, BECAUSE THE HOSTNAME (node*) IS SAME FOR BOTH MACHINES
[1]	217	case $local_host in
[1468]	218	(ambiel-lx) local_address=134.106.74.48; local_host=lcfor;;
	219	(atmos) local_address=172.20.25.35; local_host=lcide;;
	220	(austru) local_address=130.75.105.128; local_host=lcmuk;;
	221	(autan) local_address=130.75.105.57; local_host=lcmuk;;
	222	(bora) local_address=130.75.105.103; local_host=lcmuk;;
[2187]	223	(a0\|b0) local_address=133.5.4.33; local_host=lckyuh;;
[1545]	224	(blizzard1\|p0\|p1\|p2\|p3\|p4\|p5\|p6\|p7\|p8\|p9) local_address=136.172.40.15; local_host=ibmh;;
	225	(blizzard2\|p0\|p1\|p2\|p3\|p4\|p5\|p6\|p7\|p8\|p9) local_address=136.172.40.16; local_host=ibmh;;
[1468]	226	(blogin\|bxc) local_address=130.73.233.1; local_host=lccrayb;;
	227	(hlogin\|hxc) local_address=130.75.4.1; local_host=lccrayh;;
	228	(breva) local_address=130.75.105.98; local_host=lcmuk;;
	229	(buran) local_address=130.75.105.58; local_host=lcmuk;;
	230	(caurus) local_address=130.75.105.19; local_host=lcmuk;;
	231	(climate*) local_address=165.132.26.68; local_host=lcyon;;
	232	(clogin*) local_address=86.50.166.21; local_host=lccrayf;;
	233	(cs*) local_address=136.172.44.131; local_host=nech;;
	234	(elephanta) local_address=130.75.105.6; local_host=lcmuk;;
[2257]	235	(hpcl*) local_address=eddy.hpc.uni-oldenburg.de; local_host=lceddy;;
	236	(cfd*) local_address=eddy.hpc.uni-oldenburg.de; local_host=lceddy;;
[1468]	237	(node*) local_address=165.132.26.61 local_host=lck;;
	238	# (node*) local_address=210.219.61.8 local_host=lckordi;;
	239	(gaia*) local_address=150.183.146.24; local_host=ibmkisti;;
[2147]	240	(gharbi) local_address=130.75.105.47; local_host=lcmuk;;
[1468]	241	(gallego) local_address=130.75.105.10; local_host=lcmuk;;
	242	(gregale) local_address=130.75.105.109; local_host=lcmuk;;
	243	(hababai) local_address=130.75.105.108; local_host=lcmuk;;
	244	(hayaka*) local_address=133.5.4.33; local_host=lckyuh;;
	245	(hexagon.bccs.uib.no) local_address=129.177.20.113; local_host=lcxe6;;
	246	(hx*) local_address=133.3.51.11; local_host=lckyoto;;
	247	(inferno) local_address=130.75.105.5; local_host=lcmuk;;
	248	(irifi) local_address=130.75.105.104; local_host=lcmuk;;
	249	(jaboticaba) local_address=150.163.25.181; local_host=lcbr;;
	250	(sno) local_address=130.75.105.113; local_host=lcmuk;;
[2147]	251	(kuma) local_address=130.75.105.115; local_host=lcmuk;;
[1468]	252	(levanto) local_address=130.75.105.45; local_host=lcmuk;;
[1940]	253	(login*) local_address=118.128.66.201; local_host=lckiaps;;
[1468]	254	(maestro) local_address=130.75.105.2; local_host=lcmuk;;
	255	(meller) local_address=134.106.74.155; local_host=lcfor;;
	256	(meteo-login*) local_address=193.166.211.144;local_host=lcxt5m;;
[1620]	257	(mlogin1\|m1) local_address=136.172.50.13; local_host=lcbullhh;;
[1468]	258	(hexagon*) local_address=129.177.20.113; local_host=lcxe6;;
	259	(nobel*) local_address=150.183.5.101; local_host=ibms;;
[1866]	260	(ocean) local_address="ocean"; local_host=lcocean;;
[1468]	261	(orkan) local_address=130.75.105.3; local_host=lcmuk;;
	262	(ostria) local_address=130.75.105.106; local_host=lcmuk;;
	263	(paesano) local_address=130.75.105.46; local_host=lcmuk;;
	264	(pcj*) local_address=172.31.120.1; local_host=lckyut;;
	265	(pingui) local_address=134.106.74.118; local_host=lcfor;;
	266	(quanero) local_address=130.75.105.107; local_host=lcmuk;;
	267	(rte*) local_address=133.5.185.60; local_host=lcrte;;
[1866]	268	(schultzl-Latitude-E6540) local_address="schultzl-Latitude-E6540"; local_host=lcsch;;
[1468]	269	(shiokaze-lx) local_address=134.106.74.123; local_host=lcfor;;
	270	(sisu-login*) local_address=86.50.166.21; local_host=lccrayf;;
	271	(solano) local_address=130.75.105.110; local_host=lcmuk;;
	272	(sugoka*) local_address=172.31.120.1; local_host=lckyut;;
[1866]	273	(tc*) local_address="ocean"; local_host=lcocean;;
[1468]	274	(t2a*) local_address=10.1.6.165; local_host=lctit;;
	275	(urban*) local_address=147.46.30.151 local_host=lcsb;;
	276	(vinessa) local_address=130.75.105.112; local_host=lcmuk;;
	277	(vorias) local_address=172.20.25.43; local_host=lcmuk;;
	278	(*.cc.kyushu-u.ac.jp) local_address=133.5.4.129; local_host=ibmku;;
[1]	279	(*) printf "\n +++ \"$local_host\" unknown";
[1255]	280	printf "\n please contact the PALM group at IMUK";
[1]	281	locat=parameter; exit;;
	282	esac
	283
	284
	285
[1289]	286	# BY DEFAULT, THE REMOTE HOST IS THE LOCAL HOST
[1]	287	remote_host=$local_host
	288
	289
	290
	291
[1289]	292	# READ THE SHELLSCRIPT-OPTIONS
[1094]	293	while getopts :c:dDe:g:h:m:n:N:O:P:q:t:T:u:vX: option
[1]	294	do
	295	case $option in
	296	(c) job_catalog=$OPTARG;;
	297	(d) delete_dayfile=true;;
	298	(D) no_submit=true;;
[352]	299	(e) email_notification=$OPTARG;;
[125]	300	(g) group_number=$OPTARG;;
[1]	301	(h) remote_host=$OPTARG;;
	302	(m) memory=$OPTARG;;
	303	(n) job_name=$OPTARG;;
	304	(N) node_usage=$OPTARG;;
	305	(O) threads_per_task=$OPTARG;;
[1094]	306	(P) scp_port=$OPTARG;;
[1]	307	(q) no_default_queue=$OPTARG;;
	308	(t) cputime=$OPTARG;;
	309	(T) tasks_per_node=$OPTARG;;
	310	(u) remote_user=$OPTARG;;
	311	(v) verify=false;;
	312	(X) numprocs=$OPTARG;;
	313	(\?) printf "\n +++ Option $OPTARG unknown \n";
	314	locat=option; exit;;
	315	esac
	316	done
	317
	318
[1289]	319	# GET THE NAME OF THE JOBFILE AS NEXT ARGUMENT
[1103]	320	(( to_shift = $OPTIND - 1 ))
	321	shift $to_shift; file_to_send=$1
[1]	322
	323
[1289]	324	# OUTPUT OF SHORT DESCRIPTION OF SCRIPT-OPTIONS
[1]	325	if [ "$1" = "?" ]
	326	then
	327	(printf "\n *** subjob can be called as follows:\n"
	328	printf "\n subjob -c.. -d -D -h.. -m.. -q.. -t.. -u.. -v <jobfile>\n"
	329	printf "\n Description of available options:\n"
	330	printf "\n Option Description Default-Value"
	331	printf "\n -c job-input- and output-catalog ~/job_queue"
	332	printf "\n -d no job-protocol will be created ---"
	333	printf "\n -D only the job-file will be created ---"
	334	printf "\n -h execution host, available hosts: $remote_host"
[1289]	335	printf "\n ibm, ibmh, ibmkisti, ibmku, ibms, lc...,"
	336	printf "\n lckiaps, lctit, nech"
[1]	337	printf "\n -m memory demand per process in MByte ---"
	338	printf "\n -n jobname <jobdatei>"
	339	printf "\n -O threads per task (for OpenMP usage) 1"
[1094]	340	printf "\n -P ssh/scp port default port"
[1]	341	printf "\n -q job-queue to be used default"
	342	printf "\n -t allowed cpu-time in seconds ---"
	343	printf "\n -T tasks per node (on parallel hosts) ---"
	344	printf "\n -u username on execution host from .netrc"
	345	printf "\n -v no prompt for confirmation ---"
	346	printf "\n -X # of processors (on parallel hosts) 1"
	347	printf "\n "
	348	printf "\n The only possible positional parameter is <jobfile>:"
	349	printf "\n The complete NQS-job must be provided here."
	350	printf "\n <jobfile>=? creates this outline\n\n") \| more
	351	exit
	352	fi
	353
	354
	355
[1289]	356	# CHECK, IF JOB-FILE HAS BEEN GIVEN AS ARGUMENT AND IF THE FILE ITSELF EXISTS
[1]	357	if [[ "$file_to_send" = "" ]]
	358	then
	359	printf "\n +++ job-file missing"
	360	locat=parameter; exit
	361	else
	362	if [[ -f $file_to_send ]]
	363	then
	364	true
	365	else
	366	printf "\n +++ job-file: "
	367	printf "\n $file_to_send"
	368	printf "\n does not exist"
	369	locat=parameter; exit
	370	fi
	371	fi
	372
	373
	374
[1289]	375	# IF NO JOBNAME HAS BEEN GIVEN, JOBNAME IS SET TO THE NAME OF THE JOB-FILE,
	376	# PROVIDED THAT THE JOB-FILE NAME DOES NOT CONTAIN ANY PATH
[1]	377	if [[ $job_name = none ]]
	378	then
	379	job_name=$file_to_send
	380	fi
	381	if [[ $(echo $job_name \| grep -c "/") != 0 ]]
	382	then
	383	printf "\n +++ job-file name: "
	384	printf "\n $job_name"
	385	printf "\n must not contain \"/\"-characters"
	386	locat=parameter; exit
	387	fi
	388
	389
	390
	391
[1289]	392	# SET HOST-SPECIFIC QUANTITIES, OR TERMINATE IN CASE OF UNKNOWN HOST,
	393	# OR IF NO HOST HAS BEEN GIVEN
[1]	394	if [[ $remote_host = none ]]
	395	then
	396	printf "\n +++ host missing"
	397	locat=option; exit
	398	else
	399	case $remote_host in
[1468]	400	(ibm) queue=p690_standard; remote_address=134.76.99.81; submcom=/usr/lpp/LoadL/full/bin/llsubmit;;
	401	(ibmh) queue=cluster; remote_address=136.172.40.15; submcom=/usr/lpp/LoadL/full/bin/llsubmit;;
	402	(ibmkisti) queue=class.32plus; remote_address=150.183.146.24; submcom=/usr/lpp/LoadL/full/bin/llsubmit;;
	403	(ibmku) queue=s4; remote_address=133.5.4.129; submcom=/usr/local/bin/llsubmit;;
	404	(ibms) queue=p_normal; remote_address=150.183.5.101; submcom=/usr/lpp/LoadL/full/bin/llsubmit;;
[1620]	405	(lcbullhh) queue=compute; remote_address=136.172.50.13; submcom=/usr/bin/sbatch;;
[2134]	406	(lccrayb) queue=mpp1testq; remote_address=130.73.233.1; submcom="/opt/moab/default/bin/msub -E";;
	407	(lccrayh) queue=mpp1testq; remote_address=130.75.4.1; submcom="/opt/moab/default/bin/msub -E";;
[1468]	408	(lccrayf) queue=small; remote_address=86.50.166.21; submcom=/opt/slurm/default/bin/sbatch;;
[2257]	409	(lceddy) remote_address=eddy.hpc.uni-oldenburg.de; submcom=sbatch;;
[1468]	410	(lckyoto) remote_address=133.3.51.11; submcom=/thin/local/bin/qsub;;
	411	(lck) remote_address=165.132.26.61; submcom=/usr/torque/bin/qsub;;
[1940]	412	(lckiaps) remote_address=118.128.66.201; submcom=/opt/pbs/default/bin/qsub;;
[1468]	413	(lckordi) remote_address=210.219.61.8; submcom=/usr/torque/bin/qsub;;
	414	(lckyuh) remote_address=133.5.4.33; submcom=/usr/bin/pjsub;;
	415	(lckyut) remote_address=133.5.4.37; submcom=/usr/bin/pjsub;;
[1866]	416	(lcocean) remote_address="ocean"; submcom=qsub;;
[1468]	417	(lcsb) remote_address=147.46.30.151; submcom=/usr/torque/bin/qsub;;
	418	(lctit) queue=S; remote_address=10.1.6.165; submcom=/opt/pbs/tools/bin/t2sub;;
	419	(lcxe6) remote_address=129.177.20.113; submcom=/opt/torque/default/bin/qsub;;
	420	(lcxt5m) remote_address=193.166.211.144; submcom=/opt/pbs/10.1.0.91350/bin/qsub;;
	421	(lcyon) remote_address=165.132.26.68; submcom=/usr/torque/bin/qsub;;
	422	(nech) qsubmem=memsz_job; qsubtime=cputim_job; remote_address=136.172.44.147; submcom="/usr/local/bin/qsub";;
[251]	423	(*) printf "\n +++ hostname \"$remote_host\" not allowed";
	424	locat=parameter; exit;;
[1]	425	esac
	426	fi
	427
	428
[1289]	429	# CHECK, IF A VALID QUEUE HAS BEEN GIVEN
[1]	430	if [[ $no_default_queue != none ]]
	431	then
	432	error=false
	433	ndq=$no_default_queue
	434	case $remote_host in
	435	(ibm) case $ndq in
	436	(p690_express\|p690_standard\|p690_long) error=false;;
	437	(*) error=true;;
	438	esac;;
	439	(ibmh) case $ndq in
[1184]	440	(cluster\|express) error=false;;
[1]	441	(*) error=true;;
	442	esac;;
[693]	443	(ibmkisti) case $ndq in
	444	(class.32plus\|class.1-2\|class.2-32) error=false;;
	445	(*) error=true;;
	446	esac;;
[622]	447	(ibmku) case $ndq in
	448	(sdbg1\|sdbg2\|sdbg4\|s4\|s16\|s32\|s32-s) error=false;;
	449	(*) error=true;;
	450	esac;;
[1]	451	(ibms) case $ndq in
	452	(express\|normal\|p_express\|p_normal\|p_normal_1.3\|p_normal_1.7\|grand) error=false;;
	453	(*) error=true;;
	454	esac;;
[1620]	455	(lcbullhh) case $ndq in
[2147]	456	(compute\|compute2\|shared) error=false;;
[1620]	457	(*) error=true;;
	458	esac;;
[1224]	459	(lccrayb) case $ndq in
[1480]	460	(dataq\|mpp1q\|mpp1testq\|mpp2q\|mpp2testq\|smp1q\|smp1testq\|specialm1q) error=false;;
[1224]	461	(*) error=true;;
	462	esac;;
[1274]	463	(lccrayh) case $ndq in
[1575]	464	(dataq\|mpp1q\|mpp1testq\|mpp2q\|mpp2testq\|smp1q\|smp1testq\|specialm1q) error=false;;
[1274]	465	(*) error=true;;
	466	esac;;
[1197]	467	(lccrayf) case $ndq in
	468	(usup\|test*\|small\|large) error=false;;
	469	(*) error=true;;
	470	esac;;
[2257]	471	(lceddy) case $ndq in
	472	(eddy.p\|cfdh.p\|cfdl.p\|carl.p\|mpcs.p\|mpcl.p\|mpcb.p\|all_nodes.p) error=false;;
[1099]	473	(*) error=true;;
	474	esac;;
[1040]	475	(lckiaps) case $ndq in
[1940]	476	(express\|normal\|normal20\|quickq) error=false;;
[1040]	477	(*) error=true;;
	478	esac;;
[440]	479	(lckyoto) case $ndq in
	480	(eh\|ph) error=false;;
	481	(*) error=true;;
	482	esac;;
[1099]	483	(lckyuh) case $ndq in
	484	(fx-dbg\|fx-single\|fx-small\|fx-middle\|fx-large) error=false;;
	485	(*) error=true;;
	486	esac;;
[1090]	487	(lckyut) case $ndq in
	488	(cx-dbg\|cx-single\|cx-small\|cx-middle\|cx-large) error=false;;
	489	(*) error=true;;
	490	esac;;
[1]	491	(lctit) case $ndq in
[635]	492	(G\|L128\|L256\|L512H\|S\|S96\|V) error=false;;
[1]	493	(*) error=true;;
	494	esac;;
	495	(t3eb) case $ndq in
	496	(berte\|p50\|p100\|p392\|forfree\|p25himem) error=false;;
	497	(*) error=true;;
	498	esac;;
	499	(t3eh) case $ndq in
	500	(para_t3e\|em\|k\|l\|lm\|comp_t3e\|c\|p\|ht) error=false;;
	501	(*) error=true;;
	502	esac;;
	503	(t3ej2\|t3ej5) case $ndq in
	504	(low\|normal\|high) error=false;;
	505	(*) error=true;;
	506	esac;;
	507	(t3es) case $ndq in
	508	(batch\|serial-4\|pe4\|p48\|pe16\|pe32\|pe64\|pe128) error=false;;
	509	(*) error=true;;
	510	esac;;
	511	esac
	512	if [[ $error = true ]]
	513	then
	514	printf "\n +++ queue \"$no_default_queue\" on host \"$remote_host\" not allowed"
	515	locat=parameter; exit
	516	else
	517	queue=$no_default_queue
	518	fi
	519	fi
	520
	521
	522
[1289]	523	# CHECK THE CPU-TIME
	524	# SPLIT TIME INTO HOURS, MINUTES, AND SECONDS
[1]	525	done=false
	526	while [[ $done = false ]]
	527	do
	528	if (( $cputime <= 0 ))
	529	then
	530	printf "\n +++ wrong cpu-time or cpu-time missing"
	531	printf "\n >>> Please type cpu-time in seconds as INTEGER:"
	532	printf "\n >>> "
	533	read cputime 1>/dev/null 2>&1
	534	else
	535	done=true
	536	fi
	537	done
	538	if [[ $remote_host = nech ]]
	539	then
	540	if (( tasks_per_node != 0 ))
	541	then
	542	(( cputime = cputime * tasks_per_node ))
	543	elif [[ $numprocs != 0 ]]
	544	then
	545	(( cputime = cputime * numprocs ))
	546	fi
	547	fi
	548	(( stunden = cputime / 3600 ))
	549	(( resttime = cputime - stunden * 3600 ))
	550	(( minuten = resttime / 60 ))
	551	(( sekunden = resttime - minuten * 60 ))
	552	timestring=${stunden}:${minuten}:${sekunden}
	553
	554
	555
[1289]	556	# CHECK THE MEMORY DEMAND
[1]	557	done=false
	558	while [[ $done = false ]]
	559	do
	560	if (( memory <= 0 ))
	561	then
	562	printf "\n +++ wrong memory demand or memory demand missing"
	563	printf "\n >>> Please type memory in MByte per process as INTEGER:"
	564	printf "\n >>> "
	565	read memory 1>/dev/null 2>&1
	566	else
	567	done=true
	568	fi
	569	done
	570
[1289]	571	if [[ $remote_host = nech ]]
[1]	572	then
	573	if (( tasks_per_node != 0 ))
	574	then
	575	(( Memory = memory * tasks_per_node / 1000 ))
	576	elif [[ $numprocs != 0 ]]
	577	then
	578	(( Memory = memory * numprocs / 1000 ))
	579	else
	580	(( Memory = memory / 1000 ))
	581	fi
[635]	582	elif [[ $remote_host = lctit ]]
	583	then
	584	(( Memory = memory * tasks_per_node / 1000 ))
[1]	585	fi
	586
	587
[1289]	588	# MEMORY DEMAND IN CASE OF OPENMP-USAGE ON IBM-SYSTEMS
[1]	589	if [[ $(echo $remote_host \| cut -c1-3) = ibm ]]
	590	then
	591	(( memory = memory * threads_per_task ))
	592	fi
	593
	594
[1289]	595	# CALCULATE NUMBER OF REQUIRED NODES
[1]	596	if (( tasks_per_node != 0 ))
	597	then
[1279]	598	(( nodes = ( numprocs - 1 ) / ( tasks_per_node * threads_per_task ) + 1 ))
[1]	599	fi
	600
[1094]	601
[1289]	602	# CALCULATE NUMBER OF PROCESSES PER NODE
[622]	603	(( processes_per_node = tasks_per_node * threads_per_task ))
[1]	604
[1094]	605
[1289]	606	# CALCULATE NUMBER OF MPI TASKS
[696]	607	(( mpi_tasks = numprocs / threads_per_task ))
[1]	608
[696]	609
[1289]	610	# SET PORT NUMBER OPTION FOR CALLS OF ssh/scp, subjob AND batch_scp SCRIPTS
[1094]	611	if [[ "$scp_port" != "" ]]
	612	then
	613	PORTOPT="-P $scp_port"
	614	SSH_PORTOPT="-p $scp_port"
	615	fi
	616
	617
[1289]	618	# HEADER-OUTPUT
[1]	619	if [[ $verify = true ]]
	620	then
	621	printf "\n\n"
	622	printf "#--------------------------------------------------------------# \n"
	623	spalte1=SUBJOB;spalte2=$(date)
[1103]	624	printf "\| %-20s%40s \| \n" "$spalte1" "$spalte2"
[1]	625	printf "\| \| \n"
	626	printf "\| values of parameters/options: \| \n"
[1103]	627	spalte1=$(echo local_host$punkte \| cut -c-20)
	628	spalte2=$punkte$local_host
	629	printf "\| %-20s%40s \| \n" "$spalte1" "${spalte2: -40}"
	630	spalte1=$(echo remote_host$punkte \| cut -c-20)
	631	spalte2=$punkte$remote_host
	632	printf "\| %-20s%40s \| \n" "$spalte1" "${spalte2: -40}"
	633	spalte1=$(echo queue$punkte \| cut -c-20)
	634	spalte2=$punkte$queue
	635	printf "\| %-20s%40s \| \n" "$spalte1" "${spalte2: -40}"
	636	spalte1=$(echo memory$punkte \| cut -c-20)
	637	spalte2="$punkte$memory mb"
	638	printf "\| %-20s%40s \| \n" "$spalte1" "${spalte2: -40}"
	639	spalte1=$(echo cputime$punkte \| cut -c-20)
	640	spalte2="$punkte$cputime sec"
	641	printf "\| %-20s%40s \| \n" "$spalte1" "${spalte2: -40}"
	642	spalte1=$(echo job_name$punkte \| cut -c-20)
	643	spalte2="$punkte$job_name"
	644	printf "\| %-20s%40s \| \n" "$spalte1" "${spalte2: -40}"
[1]	645	printf "#--------------------------------------------------------------# \n\n"
	646
	647
[1289]	648	# QUERY CHECK
[1]	649	antwort="dummy"
	650	while [[ $antwort != y && $antwort != Y && $antwort != n && $antwort != N ]]
	651	do
	652	read antwort?" >>> continue (y/n) ? "
	653	done
	654	if [[ $antwort = n \|\| $antwort = N ]]
	655	then
	656	locat=verify; exit
	657	fi
	658	printf "\n"
	659	fi
	660
[1289]	661	# GENERATE RANDOM IDENTIFIER, AND DETERMINE THE JOBNAME ON THE TARGET HOST
	662	identifier=$RANDOM
	663	job_on_remhost=${job_name}_${identifier}_$local_host
	664	job_to_send=job_to_send_$identifier
[1]	665	if [[ $delete_dayfile = false ]]
	666	then
[1289]	667	remote_dayfile=${local_host}_${job_name}_result_$identifier
[1]	668	local_dayfile=${remote_host}_${job_name}
	669	else
	670	remote_dayfile=/dev/null
	671	fi
	672
	673
[1289]	674	# GENERATE THE BATCH-JOB SCRIPTS (FOR QUEUEING-SYSTEMS qsub/msub/LoadLeveler)
[1]	675	if [[ $(echo $remote_host \| cut -c1-3) = ibm && $numprocs != 0 ]]
	676	then
	677
[1289]	678	# GENERAL LOADLEVELER SETTINGS
[622]	679	execute_in_shell="#!/bin/ksh"
	680	use_shell="# @ shell = /bin/ksh"
	681	consumable_memory="ConsumableMemory($memory mb)"
	682	class="# @ class = $queue"
	683	environment="# @ environment = OMP_NUM_THREADS=$threads_per_task; MP_SHARED_MEMORY=yes"
	684	network_to_use="# @ network.mpi = sn_all,shared,us"
	685	data_limit="# @ data_limit = 1.76gb"
	686	image_size="# @ image_size = 50"
[693]	687	wall_clock_limit="# @ wall_clock_limit = ${timestring},$timestring"
[312]	688
[693]	689	if [[ $email_notification = none ]]
	690	then
	691	notify_user=""
	692	else
	693	notify_user="# @ notify_user = $email_notification"
	694	if [[ $delete_dayfile = true ]]
	695	then
	696	notification='# @ notification = never'
	697	fi
	698	fi
[622]	699
[312]	700	if [[ $remote_host = ibmh ]]
[1]	701	then
[312]	702	data_limit=""
	703	network_to_use=""
[1184]	704	class="# @ class = $queue"
[312]	705	environment=""
[814]	706	rset="# @ rset = RSET_MCM_AFFINITY"
	707	task_affinity="# @ task_affinity = core(1)"
[693]	708	elif [[ $remote_host = ibmkisti ]]
	709	then
	710	network_to_use="# @ network.MPI = sn_all,shared,US"
	711	wall_clock_limit="# @ wall_clock_limit = $timestring"
[696]	712	if [[ $threads_per_task = 1 ]]
	713	then
	714	rset="# @ rset = RSET_MCM_AFFINITY"
	715	mcm_affinity_options="# @ mcm_affinity_options = mcm_mem_pref mcm_sni_none mcm_distribute"
	716	fi
[693]	717	environment=""
	718	use_shell=""
	719	data_limit=""
	720	image_size=""
[622]	721	elif [[ $remote_host = ibmku ]]
	722	then
	723	execute_in_shell="#!/usr/bin/ksh"
	724	use_shell="# @ shell = /usr/bin/ksh"
	725	consumable_memory=""
	726	environment=""
	727	network_to_use="# @ network.mpi = sn_all,shared,us"
	728	data_limit=""
	729	image_size=""
	730	elif [[ $remote_host = ibms ]]
	731	then
	732	network_to_use="# @ network.mpi = csss,shared,us"
[1]	733	fi
	734
	735	cat > $job_to_send << %%END%%
[622]	736	$execute_in_shell
	737	$use_shell
[1]	738
	739	# @ job_type = parallel
[693]	740	# @ job_name = $job_name
[1]	741	# @ resources = ConsumableCpus($threads_per_task) $consumable_memory
	742	# @ output = $remote_dayfile
	743	# @ error = $remote_dayfile
[693]	744	$wall_clock_limit
[622]	745	$image_size
[312]	746	$class
	747	$environment
[1]	748	$network_to_use
	749	$data_limit
[693]	750	$rset
	751	$mcm_affinity_options
[814]	752	$task_affinity
[1]	753	$notification
[693]	754	$notify_user
[1]	755
	756	%%END%%
	757
	758	if (( nodes > 0 ))
	759	then
	760
[693]	761	if [[ $remote_host != ibmkisti ]]
	762	then
	763
	764	cat >> $job_to_send << %%END%%
[1]	765	# @ node = $nodes
[622]	766	# @ tasks_per_node = $processes_per_node
[1]	767	# @ node_usage = $node_usage
	768	# @ queue
	769
	770	%%END%%
	771
[693]	772	else
	773
	774	cat >> $job_to_send << %%END%%
[696]	775	# @ total_tasks = $mpi_tasks
[693]	776	# @ blocking = unlimited
	777	# @ queue
	778
	779	%%END%%
	780
	781	fi
	782
[1]	783	else
	784
[1289]	785	cat >> $job_to_send << %%END%%
[1]	786	# @ blocking = unlimited
	787	# @ total_tasks = $numprocs
	788	# @ node_usage = $node_usage
	789	# @ queue
	790
	791	%%END%%
	792
	793	fi
	794
[1289]	795	# WORKAROUND BECAUSE OF SILLY JOB FILTER ON ibmkisti
[696]	796	if [[ $remote_host = ibmkisti && $threads_per_task != 1 ]]
	797	then
	798	echo "export OMP_NUM_THREADS=$threads_per_task" >> $job_to_send
	799	fi
	800
[1]	801	elif [[ $(echo $remote_host \| cut -c1-3) = ibm && $numprocs = 0 ]]
	802	then
	803
	804	cat > $job_to_send << %%END%%
	805	#!/bin/ksh
	806
	807	# @ job_type = serial
	808	# @ node_usage = $node_usage
	809	# @ job_name = palm
	810	# @ wall_clock_limit = ${timestring},$timestring
	811	# @ resources = ConsumableCpus(1) ConsumableMemory(1 gb)
	812	# @ output = $remote_dayfile
	813	# @ error = $remote_dayfile
[312]	814	$class
[1]	815	$notification
	816
	817	# @ queue
	818
	819	%%END%%
	820
[1620]	821	elif [[ $remote_host = lcbullhh ]]
	822	then
	823	if [[ $numprocs != 0 ]]
	824	then
	825	cat > $job_to_send << %%END%%
	826	#!/bin/bash -l
	827	#SBATCH -J $job_name
	828	#SBATCH -t $timestring
	829	#SBATCH -N $nodes
	830	#SBATCH --ntasks-per-node=$processes_per_node
	831	#SBATCH -p $queue
	832	#SBATCH -o $remote_dayfile
	833	#SBATCH -e $remote_dayfile
	834	#SBATCH -A $project_account
	835
	836	$init_cmds
	837	$module_calls
	838
	839	%%END%%
	840
	841	else
	842	cat > $job_to_send << %%END%%
	843	#!/bin/bash -l
	844	#SBATCH -J $job_name
	845	#SBATCH -t $timestring
	846	#SBATCH -l ncpus=1
	847	#SBATCH -l pmem=${memory}mb
	848	#SBATCH -m abe
	849	#SBATCH -o $remote_dayfile
	850	#SBATCH -e $remote_dayfile
	851	#SBATCH -A $project_account
	852
	853	$init_cmds
	854	$module_calls
	855
	856	%%END%%
	857
	858	fi
	859
[1274]	860	elif [[ $remote_host = lccrayb \|\| $remote_host = lccrayh ]]
[1224]	861	then
	862
[1480]	863	if [[ "$feature" != "" ]]
	864	then
	865	featuredir="#PBS -l feature=$feature"
	866	fi
	867
[1224]	868	if [[ $numprocs != 0 ]]
	869	then
	870	cat > $job_to_send << %%END%%
[1255]	871	#!/bin/bash
[1224]	872	#PBS -N $job_name
	873	#PBS -l walltime=$timestring
[1264]	874	#PBS -l nodes=$nodes:ppn=$processes_per_node
[1224]	875	#PBS -o $remote_dayfile
	876	#PBS -j oe
	877	#PBS -q $queue
[1480]	878	$featuredir
[1224]	879
[1701]	880	$init_cmds
[1224]	881	$module_calls
	882
	883	%%END%%
	884
	885	else
	886
	887	continue
	888
	889	fi
	890
[1197]	891	elif [[ $remote_host = lccrayf ]]
	892	then
	893
	894	if [[ $numprocs != 0 ]]
	895	then
	896	cat > $job_to_send << %%END%%
	897	#!/bin/bash -l
	898	#SBATCH -J $job_name
	899	#SBATCH -t $timestring
	900	#SBATCH -N $nodes
	901	#SBATCH --ntasks-per-node=$processes_per_node
	902	#SBATCH -p $queue
	903	#SBATCH -o $remote_dayfile
	904	#SBATCH -e $remote_dayfile
	905
	906	$init_cmds
	907	$module_calls
	908
	909	%%END%%
	910
	911	else
	912	cat > $job_to_send << %%END%%
	913	#!/bin/bash -l
	914	#SBATCH -J $job_name
	915	#SBATCH -t $timestring
	916	#SBATCH -l ncpus=1
	917	#SBATCH -l pmem=${memory}mb
	918	#SBATCH -m abe
	919	#SBATCH -o $remote_dayfile
	920	#SBATCH -e $remote_dayfile
	921
	922	$init_cmds
	923	$module_calls
	924
	925	%%END%%
	926
	927	fi
	928
[2257]	929
	930
	931	elif [[ $remote_host = lceddy ]]
[1099]	932	then
[2257]	933	cat > $job_to_send << %%END%%
[1099]	934	#!/bin/bash
[2257]	935	#SBATCH -J $job_name
	936	#SBATCH -t $timestring
	937	#SBATCH -n $numprocs
	938	#SBATCH -N $nodes
	939	#SBATCH --cpus-per-task 1
	940	#SBATCH -p $queue
	941	#SBATCH -o $remote_dayfile
	942	#SBATCH -e $remote_dayfile
	943	#SBATCH --mem-per-cpu $memory
	944	#SBATCH --exclusive
[1099]	945
[2257]	946	module load PALMDependencies/.gcc
	947
	948	$init_cmds
	949	$module_calls
	950
[1099]	951	%%END%%
	952
[1021]	953	elif [[ $remote_host = lck \|\| $remote_host = lckordi \|\| $remote_host = lcsb ]]
[368]	954	then
	955
	956	if [[ $numprocs != 0 ]]
	957	then
	958	cat > $job_to_send << %%END%%
	959	#!/bin/ksh
	960	#PBS -N $job_name
	961	#PBS -l walltime=$timestring
	962	#PBS -l ncpus=$numprocs
	963	#PBS -l pmem=${memory}mb
	964	#PBS -o $remote_dayfile
[1021]	965	#PBS -l nodes=$nodes:ppn=${processes_per_node}
[368]	966	#PBS -j oe
	967
	968	mpd &
	969
	970	%%END%%
	971
	972	else
	973	cat > $job_to_send << %%END%%
	974	#!/bin/ksh
	975	#PBS -N $job_name
	976	#PBS -l walltime=$timestring
	977	#PBS -l ncpus=1
	978	#PBS -l pmem=${memory}mb
	979	#PBS -o $remote_dayfile
	980	#PBS -j oe
	981
	982	%%END%%
	983
	984	fi
	985
[1040]	986	elif [[ $remote_host = lckiaps ]]
	987	then
	988
	989	if [[ $numprocs != 0 ]]
	990	then
	991	cat > $job_to_send << %%END%%
[1940]	992	#!/bin/bash
[1040]	993	#PBS -N $job_name
	994	#PBS -l walltime=$timestring
	995	#PBS -l select=1:ncpus=$numprocs
	996	#PBS -l pmem=${memory}mb
	997	#PBS -q $queue
	998	#PBS -o $remote_dayfile
	999	#PBS -j oe
	1000	#PBS -V
	1001
	1002	%%END%%
	1003
	1004	else
	1005	cat > $job_to_send << %%END%%
[1940]	1006	#!/bin/bash
[1040]	1007	#PBS -N $job_name
	1008	#PBS -l walltime=$timestring
	1009	#PBS -l ncpus=1
	1010	#PBS -l pmem=${memory}mb
	1011	#PBS -o $remote_dayfile
	1012	#PBS -j oe
	1013
	1014	%%END%%
	1015
	1016	fi
	1017
[693]	1018	elif [[ $remote_host = lcyon ]]
	1019	then
	1020
	1021	if [[ $numprocs != 0 ]]
	1022	then
	1023	cat > $job_to_send << %%END%%
	1024	#!/bin/ksh
	1025	#PBS -N $job_name
	1026	#PBS -l walltime=$timestring
	1027	#PBS -l ncpus=$numprocs
	1028	#PBS -l pmem=${memory}mb
	1029	#PBS -o $remote_dayfile
	1030	#PBS -j oe
	1031
	1032	%%END%%
	1033
	1034	else
	1035	cat > $job_to_send << %%END%%
	1036	#!/bin/ksh
	1037	#PBS -N $job_name
	1038	#PBS -l walltime=$timestring
	1039	#PBS -l ncpus=1
	1040	#PBS -l pmem=${memory}mb
	1041	#PBS -o $remote_dayfile
	1042	#PBS -j oe
	1043
	1044	%%END%%
	1045
	1046	fi
	1047
[892]	1048	elif [[ $remote_host = lcxe6 ]]
[164]	1049	then
	1050
	1051	if [[ $numprocs != 0 ]]
	1052	then
	1053	cat > $job_to_send << %%END%%
[799]	1054	#!/bin/ksh
[164]	1055	#PBS -S /bin/ksh
	1056	#PBS -N $job_name
[552]	1057	#PBS -A $project_account
[206]	1058	#PBS -j oe
[164]	1059	#PBS -l walltime=$timestring
	1060	#PBS -l mppwidth=${numprocs}
[622]	1061	#PBS -l mppnppn=${processes_per_node}
[164]	1062	#PBS -m abe
	1063	#PBS -o $remote_dayfile
[492]	1064	$email_directive
[164]	1065
[892]	1066	$init_cmds
[493]	1067	$module_calls
[343]	1068
[164]	1069	%%END%%
	1070
[108]	1071	else
	1072	cat > $job_to_send << %%END%%
	1073	#!/bin/ksh
[168]	1074	#PBS -S /bin/ksh
[108]	1075	#PBS -N $job_name
[552]	1076	#PBS -A $project_account
[206]	1077	#PBS -j oe
[108]	1078	#PBS -l walltime=$timestring
	1079	#PBS -l ncpus=1
	1080	#PBS -l pmem=${memory}mb
	1081	#PBS -m abe
[492]	1082	$email_directive
[108]	1083	#PBS -o $remote_dayfile
	1084
[892]	1085	$init_cmds
[493]	1086	$module_calls
[343]	1087
[108]	1088	%%END%%
	1089
	1090	fi
	1091
[440]	1092	elif [[ $remote_host = lckyoto ]]
[437]	1093	then
	1094
[440]	1095	cat > $job_to_send << %%END%%
[799]	1096	#!/bin/ksh
[440]	1097	# @\$-o $remote_dayfile
	1098	# @\$-eo -oi
	1099	# @\$-lP 16
[799]	1100	# @\$-lp 1
[440]	1101	# @\$-lm 28gb -llm unlimited -ls unlimited
	1102	# @\$-q $queue
	1103	# @\$-Pvn abs_pack
	1104	##for intel? @\$-Pvn abs_unpack -Pvs unpack -Pvc unpack
	1105	#. /thin/local/etc/setprofile/intel-11.0.sh
	1106	#. /thin/local/etc/setprofile/mvapich2-1.4+intel-11.0.sh
	1107	. ~/.myprofile
	1108	#. /home2/t/t51254/palm/current_version/myprofile
	1109	#. /thin/apps/pgi/mpi.sh
	1110	#
	1111	env
	1112	#
	1113	set -x
	1114
	1115	%%END%%
	1116
	1117	elif [[ $remote_host = lcxt5m ]]
	1118	then
	1119
[437]	1120	if [[ $numprocs != 0 ]]
	1121	then
	1122	cat > $job_to_send << %%END%%
[799]	1123	#!/bin/ksh
[437]	1124	#PBS -S /bin/ksh
	1125	#PBS -N $job_name
	1126	#PBS -j oe
	1127	#PBS -l walltime=$timestring
	1128	#PBS -l mppwidth=${numprocs}
[622]	1129	#PBS -l mppnppn=${processes_per_node}
[437]	1130	#PBS -m abe
	1131	#PBS -o $remote_dayfile
	1132
[892]	1133	$init_cmds
[493]	1134	$module_calls
[437]	1135
	1136	%%END%%
	1137
	1138	else
	1139	cat > $job_to_send << %%END%%
	1140	#!/bin/ksh
	1141	#PBS -S /bin/ksh
	1142	#PBS -N $job_name
	1143	#PBS -j oe
	1144	#PBS -l walltime=$timestring
	1145	#PBS -l ncpus=1
	1146	#PBS -l pmem=${memory}mb
	1147	#PBS -m abe
	1148	#PBS -o $remote_dayfile
	1149
[892]	1150	$init_cmds
[493]	1151	$module_calls
[437]	1152
	1153	%%END%%
	1154
	1155	fi
	1156
[1099]	1157	elif [[ $remote_host = lckyuh ]]
	1158	then
	1159	cat > $job_to_send << %%END%%
	1160	#!/bin/bash
	1161	#PJM -L "rscgrp=$queue"
	1162	#PJM -L "node=$nodes"
	1163	#PJM --mpi "proc=$numprocs"
	1164	#PJM -L "elapse=$timestring"
	1165	#PJM -o $remote_dayfile
	1166	#PJM -j
	1167	#PJM -X
	1168	#PJM --no-stging
	1169
	1170	export LANG=en_US.UTF-8
	1171	%%END%%
	1172
[1090]	1173	elif [[ $remote_host = lckyut ]]
	1174	then
	1175	cat > $job_to_send << %%END%%
	1176	#!/bin/bash
[1099]	1177	#PJM -L "rscgrp=$queue"
[1090]	1178	#PJM -L "vnode=$numprocs"
	1179	#PJM -L "vnode-core=1"
	1180	#PJM -L "elapse=$timestring"
	1181	#PJM --mpi proc=$numprocs
	1182	#PJM -o $remote_dayfile
	1183	#PJM -j
[1099]	1184	#PJM -X
	1185	#PJM --no-stging
[1090]	1186
	1187	export LANG=en_US.UTF-8
	1188	%%END%%
	1189
[1866]	1190	elif [[ $remote_host = lcocean ]]
	1191	then
	1192	cat > $job_to_send << %%END%%
	1193	#!/bin/bash
	1194	#$ -cwd
	1195	#$ -V
	1196	#$ -N $job_name
	1197	#$ -pe orte $numprocs
	1198	#$ -o $remote_dayfile
	1199	#$ -j y
	1200	#$ -R y
	1201	$init_cmds
	1202	$module_calls
	1203
	1204	%%END%%
	1205
[1]	1206	elif [[ $remote_host = nech ]]
	1207	then
	1208
	1209	if (( nodes > 1 ))
	1210	then
	1211	cat > $job_to_send << %%END%%
	1212	#!/bin/ksh
[622]	1213	#PBS -l cpunum_prc=$processes_per_node,cputim_job=$cputime
[1]	1214	#PBS -l ${qsubmem}=${Memory}gb
	1215	#PBS -b $nodes
	1216	#PBS -o $remote_dayfile
	1217	#PBS -N palm
	1218	#PBS -j o
	1219	#PBS -T mpisx
	1220
	1221	%%END%%
	1222
	1223	elif [[ $numprocs != 0 ]]
	1224	then
	1225	cat > $job_to_send << %%END%%
	1226	#!/bin/ksh
[622]	1227	#PBS -l cpunum_prc=$processes_per_node,cputim_job=$cputime
[1]	1228	#PBS -l ${qsubmem}=${Memory}gb
	1229	#PBS -o $remote_dayfile
	1230	#PBS -N palm
	1231	#PBS -j o
	1232
	1233	%%END%%
	1234
	1235	else
	1236	cat > $job_to_send << %%END%%
	1237	#!/bin/ksh
	1238	#PBS -l ${qsubmem}=${Memory}gb,${qsubtime}=$cputime
	1239	#PBS -o $remote_dayfile
	1240	#PBS -j o
	1241
	1242	%%END%%
	1243
	1244	fi
	1245
	1246	elif [[ $remote_host = lctit ]]
	1247	then
	1248	cat > $job_to_send << %%END%%
[635]	1249	#!/bin/ksh
[892]	1250	$init_cmds
[678]	1251	$module_calls
	1252
[1]	1253	%%END%%
	1254
[1289]	1255	# SET OPTIONS FOR SUBMIT-COMMAND
[678]	1256	if [[ $tasks_per_node != $processes_per_node ]]
	1257	then
[1378]	1258	submcom="$submcom -W group_list=$group_number -N $job_name -l walltime=$timestring -l select=$nodes:ncpus=$processes_per_node:mpiprocs=$tasks_per_node:mem=${Memory}gb -o $remote_dayfile -j oe -et 1 -q $queue "
[678]	1259	else
[1378]	1260	submcom="$submcom -W group_list=$group_number -N $job_name -l walltime=$timestring -l select=$nodes:ncpus=$processes_per_node:mpiprocs=$tasks_per_node:mem=${Memory}gb -l place=scatter -o $remote_dayfile -j oe -et 1 -q $queue "
[678]	1261	fi
[1]	1262
	1263	else
	1264
	1265	cat > $job_to_send << %%END%%
	1266	# @\$-q ${queue}
	1267	# @\$-l${qsubtime} $timestring
	1268	# @\$-l${qsubmem} ${memory}mb
	1269	# @\$-o $remote_dayfile
	1270	# @\$-eo
	1271
	1272	%%END%%
	1273
	1274	fi
	1275
	1276
[1289]	1277	# IN CASE OF JOBS EXECUTING ON REMOTE-HOSTS, THE TRANSFER OF THE DAYFILES
	1278	# TO THE LOCAL HOSTS WILL BE INITIATED BY TRAP ON EXIT
	1279	# NO TRANSFER POSSIBLE ON IBM IN SEOUL
[1]	1280	if [[ $delete_dayfile = false && $remote_host != $local_host ]]
	1281	then
	1282	echo "set +vx" >> $job_to_send
	1283	echo "trap '" >> $job_to_send
	1284	echo "set +vx" >> $job_to_send
[2257]	1285	if [[ $(echo $remote_host \| cut -c1-3) = ibm \|\| $remote_host = lcbullhh \|\| $remote_host = lccrayb \|\| $remote_host = lccrayh \|\| $(echo $remote_host \| cut -c1-3) = nec \|\| $remote_host = lckiaps \|\| $remote_host = lckyu* \|\| $remote_host = lcxe6 \|\| $remote_host = lcocean ]]
[1]	1286	then
[622]	1287	if [[ $remote_host = ibmh ]]
[1]	1288	then
	1289	return_queue=c1
[693]	1290	elif [[ $remote_host = ibmkisti ]]
	1291	then
	1292	return_queue=class.1-2
[622]	1293	elif [[ $remote_host = ibmku ]]
	1294	then
	1295	return_queue=sdbg2
[1]	1296	elif [[ $remote_host = ibms ]]
	1297	then
	1298	return_queue=p_normal
[1620]	1299	elif [[ $remote_host = lcbullhh ]]
	1300	then
	1301	return_queue=shared
[1274]	1302	elif [[ $remote_host = lccrayb \|\| $remote_host = lccrayh ]]
[1255]	1303	then
	1304	return_queue=dataq
[1468]	1305	elif [[ $remote_host = lcxe6 ]]
	1306	then
	1307	return_queue=debug
[1040]	1308	elif [[ $remote_host = lckiaps ]]
	1309	then
	1310	return_queue=express
[1099]	1311	elif [[ $remote_host = lckyuh ]]
	1312	then
	1313	return_queue=cx-single
[1090]	1314	elif [[ $remote_host = lckyut ]]
	1315	then
	1316	return_queue=cx-single
[1]	1317	else
	1318	return_queue=unknown
	1319	fi
	1320
	1321	if [[ $(echo $remote_host \| cut -c1-3) = ibm ]]
	1322	then
	1323
[622]	1324	if [[ $remote_host = ibmku ]]
	1325	then
[1289]	1326	echo "echo \"#!/usr/bin/ksh\" >> scpjob.$identifier" >> $job_to_send
	1327	echo "echo \"# @ shell = /usr/bin/ksh\" >> scpjob.$identifier" >> $job_to_send
[622]	1328	else
[1289]	1329	echo "echo \"#!/bin/ksh\" >> scpjob.$identifier" >> $job_to_send
[622]	1330	fi
[1289]	1331	echo "echo \"# @ job_type = serial\" >> scpjob.$identifier" >> $job_to_send
	1332	echo "echo \"# @ job_name = transfer\" >> scpjob.$identifier" >> $job_to_send
	1333	echo "echo \"# @ resources = ConsumableCpus(1) ConsumableMemory(1 gb)\" >> scpjob.$identifier" >> $job_to_send
	1334	echo "echo \"# @ wall_clock_limit = 00:10:00,00:10:00\" >> scpjob.$identifier " >> $job_to_send
	1335	echo "echo \"# @ output = job_queue/last_job_transfer_protocol\" >> scpjob.$identifier" >> $job_to_send
	1336	echo "echo \"# @ error = job_queue/last_job_transfer_protocol\" >> scpjob.$identifier" >> $job_to_send
[312]	1337	if [[ $host != "ibmh" ]]
	1338	then
[1289]	1339	echo "echo \"# @ class = $return_queue\" >> scpjob.$identifier" >> $job_to_send
[312]	1340	fi
[1289]	1341	echo "echo \"# @ image_size = 10\" >> scpjob.$identifier" >> $job_to_send
	1342	echo "echo \"# @ notification = never\" >> scpjob.$identifier" >> $job_to_send
[1]	1343
[1289]	1344	echo "echo \"# @ queue\" >> scpjob.$identifier" >> $job_to_send
	1345	echo "echo \" \" >> scpjob.$identifier" >> $job_to_send
[1]	1346
[1289]	1347	echo "echo \"set -x\" >> scpjob.$identifier" >> $job_to_send
[1468]	1348	echo "echo \"batch_scp $PORTOPT -d -w 10 -u $local_user $local_address ${job_catalog}/$remote_dayfile \\\"$job_catalog\\\" $local_dayfile\" >> scpjob.$identifier" >> $job_to_send
[622]	1349	if [[ $remote_host = ibmku ]]
	1350	then
[1289]	1351	echo "echo \"rm scpjob.$identifier\" >> scpjob.$identifier" >> $job_to_send
[622]	1352	fi
[1289]	1353	echo "echo \"exit\" >> scpjob.$identifier" >> $job_to_send
[1]	1354
	1355	elif [[ $remote_host = nech ]]
	1356	then
	1357	echo "cd /pf/b/${remote_user}/job_queue" >> $job_to_send
[1289]	1358	echo "cat > scpjob.$identifier << %%END%%" >> $job_to_send
[1]	1359	echo "#PBS -l ${qsubmem}=1GB,${qsubtime}=100" >> $job_to_send
	1360	echo "#PBS -o last_job_transfer_protocol" >> $job_to_send
	1361	echo "#PBS -j o" >> $job_to_send
	1362	echo " " >> $job_to_send
	1363	echo "set -x" >> $job_to_send
	1364	echo "cd /pf/b/${remote_user}/job_queue" >> $job_to_send
[1468]	1365	echo "batch_scp $PORTOPT -d -w 10 -u $local_user $local_address $remote_dayfile \"$job_catalog\" $local_dayfile" >> $job_to_send
[1]	1366	echo "[[ \"\$for_subjob_to_do\" != \"\" ]] && eval \$for_subjob_to_do" >> $job_to_send
	1367	echo "%%END%%" >> $job_to_send
	1368
[1620]	1369	elif [[ $remote_host = lcbullhh ]]
	1370	then
	1371	echo "cat > scpjob.$identifier << %%END%%" >> $job_to_send
	1372	echo "#!/bin/bash" >> $job_to_send
	1373	echo "#SBATCH --job-name=job_protocol_transfer" >> $job_to_send
	1374	echo "#SBATCH -t 00:20:00" >> $job_to_send
	1375	echo "#SBATCH -N 1" >> $job_to_send
	1376	echo "#SBATCH -n 1" >> $job_to_send
	1377	echo "#SBATCH -o \$HOME/job_queue/last_job_transfer_protocol" >> $job_to_send
	1378	echo "#SBATCH -o $remote_dayfile" >> $job_to_send
	1379	echo "#SBATCH -e $remote_dayfile" >> $job_to_send
	1380	echo "#SBATCH -A $project_account" >> $job_to_send
	1381	echo "#SBATCH -p $return_queue" >> $job_to_send
	1382	echo " " >> $job_to_send
	1383	echo "set -x" >> $job_to_send
	1384	echo "batch_scp $PORTOPT -d -w 10 -u $local_user $local_address ${job_catalog}/$remote_dayfile \"$job_catalog\" $local_dayfile" >> $job_to_send
	1385	echo "[[ \"\$for_subjob_to_do\" != \"\" ]] && eval \$for_subjob_to_do" >> $job_to_send
	1386	echo "%%END%%" >> $job_to_send
	1387
[1099]	1388	elif [[ $remote_host = lckyuh ]]
	1389	then
[1289]	1390	echo "cat > scpjob.$identifier << %%END%%" >> $job_to_send
[1099]	1391	echo "#!/bin/bash" >> $job_to_send
	1392	echo "#PJM -L \"node=1\"" >> $job_to_send
	1393	echo "#PJM -L \"rscgrp=$return_queue\"" >> $job_to_send
	1394	echo "#PJM --no-stging" >> $job_to_send
	1395	echo "#PJM -L \"elapse=30:00\"" >> $job_to_send
	1396	echo "#PJM -o \$HOME/job_queue/last_job_transfer_protocol" >> $job_to_send
	1397	echo "#PJM -j" >> $job_to_send
	1398	echo " " >> $job_to_send
	1399	echo "export LANG=en_US.UTF-8" >> $job_to_send
	1400	echo "set -x" >> $job_to_send
[1468]	1401	echo "batch_scp $PORTOPT -d -w 10 -u $local_user $local_address $remote_dayfile \"$job_catalog\" $local_dayfile" >> $job_to_send
[1099]	1402	echo "[[ \"\$for_subjob_to_do\" != \"\" ]] && eval \$for_subjob_to_do" >> $job_to_send
	1403	echo "%%END%%" >> $job_to_send
	1404
[1090]	1405	elif [[ $remote_host = lckyut ]]
	1406	then
[1289]	1407	echo "cat > scpjob.$identifier << %%END%%" >> $job_to_send
[1090]	1408	echo "#!/bin/bash" >> $job_to_send
	1409	echo "#PJM -L \"vnode=1\"" >> $job_to_send
	1410	echo "#PJM -L \"rscgrp=$return_queue\"" >> $job_to_send
	1411	echo "#PJM --no-stging" >> $job_to_send
	1412	echo "#PJM -L \"elapse=30:00\"" >> $job_to_send
	1413	echo "#PJM -o \$HOME/job_queue/last_job_transfer_protocol" >> $job_to_send
	1414	echo "#PJM -j" >> $job_to_send
	1415	echo " " >> $job_to_send
	1416	echo "export LANG=en_US.UTF-8" >> $job_to_send
	1417	echo "set -x" >> $job_to_send
[1468]	1418	echo "batch_scp $PORTOPT -d -w 10 -u $local_user $local_address $remote_dayfile \"$job_catalog\" $local_dayfile" >> $job_to_send
[1090]	1419	echo "[[ \"\$for_subjob_to_do\" != \"\" ]] && eval \$for_subjob_to_do" >> $job_to_send
	1420	echo "%%END%%" >> $job_to_send
	1421
[1274]	1422	elif [[ $remote_host = lccrayb \|\| $remote_host = lccrayh ]]
[1255]	1423	then
[1289]	1424	echo "cat > scpjob.$identifier << %%END%%" >> $job_to_send
[1255]	1425	echo "#!/bin/bash" >> $job_to_send
	1426	echo "#PBS -N job_protocol_transfer" >> $job_to_send
	1427	echo "#PBS -l walltime=00:30:00" >> $job_to_send
[1262]	1428	echo "#PBS -l nodes=1:ppn=1" >> $job_to_send
[1255]	1429	echo "#PBS -o \$HOME/job_queue/last_job_transfer_protocol" >> $job_to_send
	1430	echo "#PBS -j oe" >> $job_to_send
	1431	echo " " >> $job_to_send
	1432	echo "set -x" >> $job_to_send
[1468]	1433	echo "batch_scp $PORTOPT -d -w 10 -u $local_user $local_address ${job_catalog}/$remote_dayfile \"$job_catalog\" $local_dayfile" >> $job_to_send
[1255]	1434	echo "[[ \"\$for_subjob_to_do\" != \"\" ]] && eval \$for_subjob_to_do" >> $job_to_send
	1435	echo "%%END%%" >> $job_to_send
	1436
[1866]	1437	elif [[ $remote_host = lcocean ]]
	1438	then
	1439	echo "cat > scpjob.${identifier}.tmp << %%END%%" >> $job_to_send
	1440	echo "#!/bin/bash" >> $job_to_send
	1441	echo "SGEPREFIX -S /bin/bash" >> $job_to_send
	1442	echo "SGEPREFIX -N transfer_$job_name" >> $job_to_send
	1443	echo "SGEPREFIX -cwd" >> $job_to_send
	1444	echo "SGEPREFIX -j y" >> $job_to_send
	1445	echo "SGEPREFIX -o ${local_host}_${job_name}_scpjob_$identifier" >> $job_to_send
	1446	echo " " >> $job_to_send
	1447	echo "set -x" >> $job_to_send
	1448	echo "export PALM_BIN=$PALM_BIN" \| sed -e 's:'$HOME':$HOME:' >> $job_to_send
	1449	echo "export PATH=\$PATH:\$PALM_BIN" >> $job_to_send
	1450	echo "" >> $job_to_send
	1451	echo "batch_scp $PORTOPT -d -w 10 -u $local_user $local_address ${job_catalog}/$remote_dayfile \"$job_catalog\" $local_dayfile" >> $job_to_send
	1452	echo "[[ \"\$for_subjob_to_do\" != \"\" ]] && eval \$for_subjob_to_do" >> $job_to_send
	1453	echo "rm -f scpjob.${identifier}" >> $job_to_send
	1454	echo "%%END%%" >> $job_to_send
	1455	echo "sed -e 's/SGEPREFIX/#$/g' scpjob.${identifier}.tmp > scpjob.${identifier}" >> $job_to_send
	1456	echo "rm -f scpjob.${identifier}.tmp" >> $job_to_send
	1457
[1468]	1458	elif [[ $remote_host = lcxe6 ]]
	1459	then
	1460	echo "cat > scpjob.${identifier} << %%END%%" >> $job_to_send
	1461	echo "#!/bin/ksh" >> $job_to_send
	1462	echo "#PBS -N job_protocol_transfer" >> $job_to_send
	1463	echo "#PBS -l walltime=00:30:00" >> $job_to_send
	1464	echo "#PBS -A $project_account" >> $job_to_send
	1465	echo "#PBS -l mppwidth=1" >> $job_to_send
	1466	echo "#PBS -l mppnppn=1" >> $job_to_send
	1467	echo "#PBS -o \$HOME/job_queue/last_job_transfer_protocol" >> $job_to_send
	1468	echo "#PBS -j oe" >> $job_to_send
	1469	echo " " >> $job_to_send
	1470	echo "set -x" >> $job_to_send
	1471	echo "batch_scp $PORTOPT -d -w 10 -u $local_user $local_address ${job_catalog}/$remote_dayfile \"$job_catalog\" $local_dayfile" >> $job_to_send
	1472	echo "[[ \"\$for_subjob_to_do\" != \"\" ]] && eval \$for_subjob_to_do" >> $job_to_send
	1473	echo "%%END%%" >> $job_to_send
[1]	1474	else
	1475
[1289]	1476	echo "cat > scpjob.$identifier << %%END%%" >> $job_to_send
[1]	1477	echo "# @\\\$-q $return_queue" >> $job_to_send
	1478	echo "# @\\\$-l${qsubtime} 10" >> $job_to_send
	1479	echo "# @\\\$-l${qsubmem} 10mb" >> $job_to_send
	1480	if [[ $remote_host = t3ej2 \|\| $remote_host = t3ej5 \|\| $remote_host = t3es ]]
	1481	then
	1482	echo "# @\$-l mpp_p=0" >> $job_to_send
	1483	fi
	1484	echo '# @\$-lF 10mb' >> $job_to_send
	1485	echo '# @\$-o job_queue/last_job_transfer_protocol' >> $job_to_send
	1486	echo '# @\\\$-eo' >> $job_to_send
	1487	echo " " >> $job_to_send
	1488	if [[ $remote_host = t3ej2 \|\| $remote_host = t3ej5 ]]
	1489	then
	1490	echo "set +vx" >> $job_to_send
	1491	echo ". .profile" >> $job_to_send
	1492	fi
	1493	echo "set -x" >> $job_to_send
[1468]	1494	echo "batch_scp $PORTOPT -d -w 10 -u $local_user $local_address ${job_catalog}/$remote_dayfile \"$job_catalog\" $local_dayfile > /dev/null" >> $job_to_send
[1]	1495	echo "[[ \"\$for_subjob_to_do\" != \"\" ]] && eval \$for_subjob_to_do" >> $job_to_send
	1496	echo "%%END%%" >> $job_to_send
[1620]	1497
[1]	1498	fi
	1499
	1500	if [[ $(echo $remote_host \| cut -c1-3) = ibm ]]
	1501	then
[1289]	1502	echo "llsubmit scpjob.$identifier" >> $job_to_send
[1620]	1503	elif [[ $remote_host = lcbullhh ]]
	1504	then
	1505	echo "sbatch scpjob.$identifier" >> $job_to_send
[1274]	1506	elif [[ $remote_host = lccrayb \|\| $remote_host = lccrayh ]]
[1255]	1507	then
[2134]	1508	echo "msub -E -q $return_queue scpjob.$identifier" >> $job_to_send
[1]	1509	elif [[ $remote_host = t3eb \|\| $remote_host = t3eh \|\| $remote_host = t3ej2 \|\| $remote_host = t3ej5 ]]
	1510	then
[1289]	1511	echo "qsub -J n scpjob.$identifier" >> $job_to_send
[1]	1512	elif [[ $remote_host = t3es ]]
	1513	then
[1289]	1514	echo "qsub -J n -s /bin/ksh scpjob.$identifier" >> $job_to_send
[1043]	1515	elif [[ $remote_host = lckiaps ]]
	1516	then
[1289]	1517	echo "mv scpjob.$identifier $job_catalog" >> $job_to_send
[1468]	1518	echo "ssh $SSH_PORTOPT ${remote_username}@${remote_address} \"$submcom ${job_catalog}/scpjob.$identifier\" " >> $job_to_send
[1289]	1519	echo "rm ${job_catalog}/scpjob.$identifier" >> $job_to_send
[1099]	1520	elif [[ $remote_host = lckyu* ]]
[1090]	1521	then
[1468]	1522	echo "scp $PORTOPT scpjob.$identifier ${remote_username}@${remote_address}:job_queue" >> $job_to_send
	1523	echo "ssh $SSH_PORTOPT ${remote_username}@${remote_address} \"cd job_queue; $submcom scpjob.$identifier; rm scpjob.$identifier\" " >> $job_to_send
[2257]	1524	elif [[ $remote_host = lcocean ]]
[1099]	1525	then
[1289]	1526	echo "mv scpjob.$identifier $job_catalog" >> $job_to_send
[1468]	1527	echo "/usr/bin/ssh ${remote_username}@${remote_address} \"$init_cmds $module_calls cd $job_catalog; $submcom scpjob.$identifier\" " >> $job_to_send
[1]	1528	else
[1289]	1529	echo "$submcom scpjob.$identifier" >> $job_to_send
[1]	1530	fi
[1043]	1531	if [[ $remote_host != ibmku && $remote_host != lckiaps ]]
[622]	1532	then
[1289]	1533	echo "rm scpjob.$identifier" >> $job_to_send
[622]	1534	fi
[1]	1535	if [[ $remote_host = nech ]]
	1536	then
	1537	echo "cd -" >> $job_to_send
	1538	fi
	1539	else
[1468]	1540	# echo "ftpcopy -d $local_address ${job_catalog}/$remote_dayfile \"$job_catalog\" $local_dayfile" >> $job_to_send
[1289]	1541	# ??? funktioniert das ÃŒberhaupt noch ???
[1468]	1542	echo "nohup ftpcopy -d -w 15 $local_address ${job_catalog}/$remote_dayfile \"$job_catalog\" $local_dayfile > /dev/null &" >> $job_to_send
[1]	1543	fi
	1544	echo "set -x" >> $job_to_send
	1545	echo " ' exit" >> $job_to_send
	1546	echo "set -x" >> $job_to_send
	1547	fi
	1548
	1549
[1289]	1550	# APPEND THE JOB-FILE (CREATE BY mrun) TO THE JOB-DIRECTIVES GENERATED ABOVE
[1]	1551	cat $file_to_send >> $job_to_send
[69]	1552
[1]	1553	if [[ $remote_host = ibm ]]
	1554	then
	1555	echo " " >> $job_to_send
	1556	echo "exit" >> $job_to_send
	1557	fi
[635]	1558
[1289]	1559	# REMOVE JOB-FILE
[2257]	1560	if [[ $remote_host = lctit \|\| $remote_host = ibmku ]]
[69]	1561	then
	1562	echo " " >> $job_to_send
	1563	echo "rm ~/job_queue/$job_on_remhost" >> $job_to_send
	1564	fi
[1]	1565
	1566
[1289]	1567	# TRANSFER JOB TO THE TARGET HOST (JOB-DIRECTORY)
[1]	1568	if [[ $no_submit = false ]]
	1569	then
	1570	if [[ $remote_host != $local_host ]]
	1571	then
	1572	[[ $verify = true ]] && printf "\n >>> transfering job to \"$remote_host\"..."
[1289]	1573	if [[ $remote_host = ibms ]] # ssh on ibms cannot handle "~/"
[1]	1574	then
[82]	1575	job_catalog_save=$job_catalog
	1576	job_catalog=job_queue
	1577	elif [[ $remote_host = nech ]]
	1578	then
	1579	job_catalog_save=$job_catalog
	1580	job_catalog=/hpf/b/${remote_user}/job_queue
	1581	fi
[1096]	1582	if [[ $remote_host = nech ]]
[82]	1583	then
[1289]	1584	# FILES CAN ONLY BE TRANSFERED VIA DKRZ'S ARCHIVE-SERVER
[1094]	1585	scp $PORTOPT $job_to_send ${remote_user}@136.172.44.205:${job_catalog}/$job_on_remhost
[1]	1586	else
[1944]	1587	scp $ssh_key $PORTOPT $job_to_send ${remote_user}@${remote_address}:${job_catalog}/$job_on_remhost
[1]	1588	fi
[82]	1589	if [[ $? = 1 ]]
	1590	then
	1591	locat=scp; exit
	1592	fi
	1593	if [[ $remote_host = ibms ]]
	1594	then
	1595	job_catalog=$job_catalog_save
	1596	fi
[1]	1597	[[ $verify = true ]] && printf "\n >>> finished\n"
	1598	else
	1599	eval job_catalog=$job_catalog
	1600	cp $job_to_send ${job_catalog}/$job_on_remhost
	1601	fi
	1602
	1603
	1604
[1289]	1605	# START NQS- / LOADLEVELER-JOB
[1]	1606	if [[ $remote_host != $local_host ]]
	1607	then
	1608	[[ $verify = true ]] && printf "\n >>> submitting job using \"qsub\"...\n"
[635]	1609
[1289]	1610	if [[ $remote_host = ibmku ]]
[1]	1611	then
[1468]	1612	ssh $SSH_PORTOPT $remote_address -l $remote_user "cd $job_catalog; $submcom $job_on_remhost"
[1]	1613	else
[1944]	1614	ssh $ssh_key $SSH_PORTOPT $remote_address -l $remote_user "cd $job_catalog; $submcom $job_on_remhost; rm $job_on_remhost"
[82]	1615	fi
[1]	1616
	1617	[[ $verify = true ]] && printf " >>> o.k.\n"
	1618	else
	1619	cd $job_catalog
[2257]	1620	if [[ $(echo $local_host \| cut -c1-3) = ibm \|\| $(echo $local_host \| cut -c1-6) = lccray \|\| $local_host = lceddy ]]
[1]	1621	then
	1622	eval $submcom $job_on_remhost
[2184]	1623	elif [[ $local_host = lctit \|\| $local_host = lcxe6 \|\| $local_host = lck \|\| $local_host = lckordi \|\| $local_host = lcyon \|\| $local_host = lcsb \|\| $local_host = lckyu* ]]
[108]	1624	then
[635]	1625	chmod u+x $job_on_remhost
[108]	1626	eval $submcom $job_on_remhost
[1]	1627	elif [[ $local_host = nech ]]
	1628	then
	1629	if [[ $queue = default ]]
	1630	then
[799]	1631	eval $submcom $job_on_remhost
[1]	1632	else
[799]	1633	eval $submcom -q $queue $job_on_remhost
[1]	1634	fi
[1620]	1635	elif [[ $local_host = lcbullhh ]]
	1636	then
	1637	if [[ $queue = default ]]
	1638	then
	1639	eval $submcom $job_on_remhost
	1640	fi
[1]	1641	else
	1642	qsub $job_on_remhost
	1643	fi
[622]	1644
[2257]	1645	# JOBFILE MUST NOT BE DELETED ON lctit/ibmku. THIS WILL BE DONE
[1289]	1646	# AT THE END OF THE JOB
[2257]	1647	if [[ $local_host != lctit && $local_host != ibmku ]]
[622]	1648	then
	1649	rm $job_on_remhost
	1650	fi
[1]	1651	cd - > /dev/null
	1652	fi
	1653	fi
	1654
[1289]	1655	# FINAL ACTIONS
[1]	1656	if [[ $no_submit = false ]]
	1657	then
[1099]	1658	rm -f $job_to_send
[1]	1659	fi
[1266]	1660	[[ $verify = true ]] && printf "\n\n *** SUBJOB finished \n\n"

Note: See TracBrowser for help on using the repository browser.

Download in other formats:

| Impressum | ©Leibniz Universität Hannover |