[1] | 1 | #!/bin/ksh |
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[1090] | 2 | |
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| 3 | # subjob - script for automatic generation and submission of batch-job files |
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| 4 | # for various batch queuing systems |
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| 5 | |
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[1046] | 6 | #--------------------------------------------------------------------------------# |
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| 7 | # This file is part of PALM. |
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| 8 | # |
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| 9 | # PALM is free software: you can redistribute it and/or modify it under the terms |
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| 10 | # of the GNU General Public License as published by the Free Software Foundation, |
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| 11 | # either version 3 of the License, or (at your option) any later version. |
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| 12 | # |
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| 13 | # PALM is distributed in the hope that it will be useful, but WITHOUT ANY |
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| 14 | # WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR |
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| 15 | # A PARTICULAR PURPOSE. See the GNU General Public License for more details. |
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| 16 | # |
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| 17 | # You should have received a copy of the GNU General Public License along with |
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| 18 | # PALM. If not, see <http://www.gnu.org/licenses/>. |
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| 19 | # |
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| 20 | # Copyright 1997-2012 Leibniz University Hannover |
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| 21 | #--------------------------------------------------------------------------------# |
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| 22 | # |
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| 23 | # Current revisions: |
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[1090] | 24 | # ------------------ |
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[1225] | 25 | # |
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[1046] | 26 | # |
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| 27 | # Former revisions: |
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| 28 | # ----------------- |
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[169] | 29 | # $Id: subjob 1235 2013-09-25 07:10:22Z heinze $ |
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[1200] | 30 | # |
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[1225] | 31 | # 1224 2013-09-16 07:27:23Z raasch |
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| 32 | # first adjustments for lccrayb |
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| 33 | # |
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[1203] | 34 | # 1202 2013-07-10 16:22:07Z witha |
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| 35 | # adjustments for Forwind cluster (lcflow) |
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| 36 | # |
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[1200] | 37 | # 1199 2013-07-05 14:52:22Z raasch |
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| 38 | # adjustments for CSC Helsinki (lccrayf) |
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| 39 | # |
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[1185] | 40 | # use of cluster/express queue enabled (ibmh) |
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| 41 | # vinessa added (imuk) |
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[1047] | 42 | # |
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[1104] | 43 | # 1103 2013-02-20 02:15:53Z raasch |
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| 44 | # bash compatibility adjustments (usage of OPTIND, output formatting with printf |
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| 45 | # instead typeset -L/R), |
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| 46 | # further adjustments for lckyuh |
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| 47 | # |
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[1100] | 48 | # 2013-02-10 01:47:43Z raasch |
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| 49 | # adjustments for Kyushu-Univeristy computing center (lckyuh - hayaka) |
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| 50 | # and for Forwind cluster (lcflow) |
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| 51 | # |
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[1096] | 52 | # 1094 2013-02-03 01:52:12Z raasch |
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| 53 | # new option -P for explicit setting of ssh/scp port, |
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| 54 | # decalpha parts (yonsei) removed |
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| 55 | # |
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[1091] | 56 | # 2013-02-02 07:06:13Z raasch |
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[1099] | 57 | # adjustments for Kyushu-University computing center (lckyut - tatara) |
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[1091] | 58 | # old changelog messages removed |
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| 59 | # |
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[1047] | 60 | # 1046 2012-11-09 14:38:45Z maronga |
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| 61 | # code put under GPL (PALM 3.9) |
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| 62 | # |
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[1090] | 63 | # 08/07/94 - Siggi - first version finished |
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| 64 | # 29/06/94 - Siggi - script development started |
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| 65 | #--------------------------------------------------------------------------------# |
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| 66 | # subjob - script for automatic generation and submission of batch-job files |
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| 67 | # for various batch queuing systems |
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| 68 | #--------------------------------------------------------------------------------# |
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[1] | 69 | |
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| 70 | |
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| 71 | # VARIABLENVEREINBARUNGEN + DEFAULTWERTE |
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[352] | 72 | delete_dayfile=false |
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[799] | 73 | email_notification=none |
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[122] | 74 | group_number=none |
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[1] | 75 | locat=normal |
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| 76 | no_default_queue=none |
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| 77 | no_submit=false |
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| 78 | job_catalog="~/job_queue" |
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| 79 | job_name=none |
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| 80 | local_user=$LOGNAME |
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| 81 | node_usage=shared |
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[475] | 82 | numprocs=0 |
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[1] | 83 | punkte="..........................................................." |
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| 84 | submcom=qsub |
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| 85 | queue=default |
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| 86 | remote_host=none |
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| 87 | remote_user="" |
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| 88 | verify=true |
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| 89 | |
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| 90 | typeset -i cputime=0 memory=0 Memory=0 minuten resttime sekunden stunden |
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[696] | 91 | typeset -i inumprocs mpi_tasks=0 nodes=0 processes_per_node=0 tasks_per_node=0 threads_per_task=1 |
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[1] | 92 | |
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| 93 | |
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| 94 | |
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| 95 | # FEHLERBEHANDLUNG |
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| 96 | # BEI EXIT: |
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| 97 | trap 'if [[ $locat != normal ]] |
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| 98 | then |
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| 99 | case $locat in |
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| 100 | (option) printf "\n --> available optios can be displayed" |
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| 101 | printf " by typing:" |
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| 102 | printf "\n \"subjob ?\" \n";; |
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| 103 | (ftpcopy|parameter|scp|verify) printf "\n";; |
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| 104 | (*) printf "\n +++ unknown error" |
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| 105 | printf "\n please inform S. Raasch!\n" |
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| 106 | esac |
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| 107 | [[ -f $job_to_send ]] && rm $job_to_send |
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| 108 | printf "\n\n+++ SUBJOB killed \n\n" |
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| 109 | fi' exit |
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| 110 | |
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| 111 | |
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| 112 | # BEI TERMINAL-BREAK: |
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| 113 | trap '[[ -f $job_to_send ]] && rm $job_to_send |
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| 114 | printf "\n\n+++ SUBJOB killed \n\n" |
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| 115 | exit |
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| 116 | ' 2 |
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| 117 | |
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| 118 | |
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| 119 | |
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| 120 | |
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| 121 | # LOKALEN HOSTNAMEN FESTSTELLEN |
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| 122 | local_host=$(hostname) |
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| 123 | |
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| 124 | |
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| 125 | |
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| 126 | # HOSTSPEZIFISCHE VARIABLEN VEREINBAREN BZW. PRUEFEN, OB LOKALER HOST |
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| 127 | # UEBERHAUPT ZULAESSIG IST |
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[717] | 128 | # Note: One of the entries for "lck" or "lckordi" always has to be |
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| 129 | # comment out, because the hostname (node*) is same for both machines |
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[1] | 130 | case $local_host in |
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[1204] | 131 | (ambiel-lx) local_addres=134.106.74.48; local_host=lcfor;; |
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[1] | 132 | (atmos) local_addres=172.20.25.35; local_host=lcide;; |
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[1235] | 133 | (austru) local_addres=130.75.105.128; local_host=lcmuk;; |
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[102] | 134 | (autan) local_addres=130.75.105.57; local_host=lcmuk;; |
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[5] | 135 | (bora) local_addres=130.75.105.103; local_host=lcmuk;; |
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[400] | 136 | (bd1) local_addres=130.73.232.64; local_host=lcsgib;; |
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| 137 | (bd2) local_addres=130.73.232.65; local_host=lcsgib;; |
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| 138 | (bd3) local_addres=130.73.232.66; local_host=lcsgib;; |
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| 139 | (bd4) local_addres=130.73.232.67; local_host=lcsgib;; |
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| 140 | (b01*|bicegate1) local_addres=130.73.232.102; local_host=lcsgib;; |
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[1103] | 141 | (b04*) local_addres=133.5.4.33; local_host=lckyuh;; |
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[291] | 142 | (bicegate2) local_addres=130.73.232.103; local_host=lcsgib;; |
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[749] | 143 | (blizzard1) local_addres=136.172.40.15; local_host=ibmh;; |
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[1224] | 144 | (blogin*) local_addres=130.73.233.1; local_host=lccrayb;; |
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[12] | 145 | (breva) local_addres=130.75.105.98; local_host=lcmuk;; |
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[1174] | 146 | (buran) local_addres=130.75.105.58; local_host=lcmuk;; |
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[372] | 147 | (caurus) local_addres=130.75.105.19; local_host=lcmuk;; |
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[693] | 148 | (climate*) local_addres=165.132.26.68; local_host=lcyon;; |
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[1197] | 149 | (clogin*) local_addres=86.50.166.21; local_host=lccrayf;; |
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[108] | 150 | (compute-*.local) local_addres=172.20.4.2; local_host=lcfimm;; |
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[1] | 151 | (cs*) local_addres=136.172.44.131; local_host=nech;; |
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[5] | 152 | (elephanta) local_addres=130.75.105.6; local_host=lcmuk;; |
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[108] | 153 | (fimm.bccs.uib.no) local_addres=172.20.4.2; local_host=lcfimm;; |
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[1099] | 154 | (flow01) local_addres=10.141.255.71; local_host=lcflow;; |
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| 155 | (flow02) local_addres=10.141.255.72; local_host=lcflow;; |
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[367] | 156 | (node*) local_addres=165.132.26.61 local_host=lck;; |
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[717] | 157 | # (node*) local_addres=210.219.61.8 local_host=lckordi;; |
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[693] | 158 | (gaia*) local_addres=150.183.146.24; local_host=ibmkisti;; |
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[101] | 159 | (gallego) local_addres=130.75.105.10; local_host=lcmuk;; |
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[1] | 160 | (gfdl5) local_addres=165.132.26.58; local_host=ibmy;; |
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[5] | 161 | (gregale) local_addres=130.75.105.109; local_host=lcmuk;; |
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| 162 | (hababai) local_addres=130.75.105.108; local_host=lcmuk;; |
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[1099] | 163 | (hayaka*) local_addres=133.5.4.33; local_host=lckyuh;; |
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[892] | 164 | (hexagon.bccs.uib.no) local_addres=129.177.20.113; local_host=lcxe6;; |
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[400] | 165 | (hd1) local_addres=130.75.4.104; local_host=lcsgih;; |
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| 166 | (hd2) local_addres=130.75.4.105; local_host=lcsgih;; |
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| 167 | (hd3) local_addres=130.75.4.106; local_host=lcsgih;; |
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| 168 | (hd4) local_addres=130.75.4.107; local_host=lcsgih;; |
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[739] | 169 | (hicegate0) local_addres=130.75.4.101; local_host=lcsgih;; |
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[292] | 170 | (h01*|hicegate1) local_addres=130.75.4.102; local_host=lcsgih;; |
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[210] | 171 | (hicegate2) local_addres=130.75.4.103; local_host=lcsgih;; |
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[440] | 172 | (hx*) local_addres=133.3.51.11; local_host=lckyoto;; |
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[749] | 173 | (inferno) local_addres=130.75.105.5; local_host=lcmuk;; |
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[5] | 174 | (irifi) local_addres=130.75.105.104; local_host=lcmuk;; |
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[407] | 175 | (sno) local_addres=130.75.105.113; local_host=lcmuk;; |
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[5] | 176 | (levanto) local_addres=130.75.105.45; local_host=lcmuk;; |
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[1040] | 177 | (login*) local_addres=118.128.66.223; local_host=lckiaps;; |
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[5] | 178 | (maestro) local_addres=130.75.105.2; local_host=lcmuk;; |
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[1099] | 179 | (meller) local_addres=134.106.74.155; local_host=lcfor;; |
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[437] | 180 | (meteo-login*) local_addres=193.166.211.144;local_host=lcxt5m;; |
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[892] | 181 | (hexagon*) local_addres=129.177.20.113; local_host=lcxe6;; |
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[1] | 182 | (nobel*) local_addres=150.183.5.101; local_host=ibms;; |
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[5] | 183 | (orkan) local_addres=130.75.105.3; local_host=lcmuk;; |
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| 184 | (ostria) local_addres=130.75.105.106; local_host=lcmuk;; |
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[205] | 185 | (paesano) local_addres=130.75.105.46; local_host=lcmuk;; |
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[1099] | 186 | (pcj*) local_addres=172.31.120.1; local_host=lckyut;; |
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[789] | 187 | (pingui) local_addres=134.106.74.118; local_host=lcfor;; |
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[5] | 188 | (quanero) local_addres=130.75.105.107; local_host=lcmuk;; |
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[622] | 189 | (rte*) local_addres=133.5.185.60; local_host=lcrte;; |
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[1197] | 190 | (r1*) local_addres=130.75.4.102; local_host=lcsgih;; |
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| 191 | (r2*) local_addres=130.73.232.102; local_host=lcsgib;; |
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[1] | 192 | (scirocco) local_addres=172.20.25.41; local_host=lcmuk;; |
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[1204] | 193 | (shiokaze-lx) local_addres=134.106.74.123; local_host=lcfor;; |
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[1197] | 194 | (sisu-login*) local_addres=86.50.166.21; local_host=lccrayf;; |
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[799] | 195 | (solano) local_addres=130.75.105.110; local_host=lcmuk;; |
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[1090] | 196 | (sugoka*) local_addres=172.31.120.1; local_host=lckyut;; |
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[1] | 197 | (sun1|sun2) local_addres=130.75.6.1; local_host=unics;; |
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[259] | 198 | (sx-*) local_addres=172.16.1.131; local_host=necriam;; |
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[635] | 199 | (t2a*) local_addres=10.1.6.165; local_host=lctit;; |
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[1021] | 200 | (urban*) local_addres=147.46.30.151 local_host=lcsb;; |
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[1184] | 201 | (vinessa) local_addres=130.75.105.112; local_host=lcmuk;; |
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[1] | 202 | (vorias) local_addres=172.20.25.43; local_host=lcmuk;; |
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[622] | 203 | (*.cc.kyushu-u.ac.jp) local_addres=133.5.4.129; local_host=ibmku;; |
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[1] | 204 | (*) printf "\n +++ \"$local_host\" unknown"; |
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| 205 | printf "\n please inform S. Raasch!"; |
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| 206 | locat=parameter; exit;; |
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| 207 | esac |
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| 208 | |
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| 209 | |
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| 210 | |
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| 211 | # REMOTE HOST DEFAULTMAESSIG = LOCAL HOST SETZEN |
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| 212 | remote_host=$local_host |
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| 213 | |
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| 214 | |
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| 215 | |
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| 216 | |
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| 217 | # PROZEDUROPTIONEN EINLESEN |
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[1094] | 218 | while getopts :c:dDe:g:h:m:n:N:O:P:q:t:T:u:vX: option |
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[1] | 219 | do |
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| 220 | case $option in |
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| 221 | (c) job_catalog=$OPTARG;; |
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| 222 | (d) delete_dayfile=true;; |
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| 223 | (D) no_submit=true;; |
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[352] | 224 | (e) email_notification=$OPTARG;; |
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[125] | 225 | (g) group_number=$OPTARG;; |
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[1] | 226 | (h) remote_host=$OPTARG;; |
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| 227 | (m) memory=$OPTARG;; |
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| 228 | (n) job_name=$OPTARG;; |
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| 229 | (N) node_usage=$OPTARG;; |
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| 230 | (O) threads_per_task=$OPTARG;; |
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[1094] | 231 | (P) scp_port=$OPTARG;; |
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[1] | 232 | (q) no_default_queue=$OPTARG;; |
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| 233 | (t) cputime=$OPTARG;; |
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| 234 | (T) tasks_per_node=$OPTARG;; |
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| 235 | (u) remote_user=$OPTARG;; |
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| 236 | (v) verify=false;; |
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| 237 | (X) numprocs=$OPTARG;; |
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| 238 | (\?) printf "\n +++ Option $OPTARG unknown \n"; |
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| 239 | locat=option; exit;; |
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| 240 | esac |
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| 241 | done |
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| 242 | |
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| 243 | |
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| 244 | # JOBDATEINAMEN ALS NAECHSTES ARGUMENT HOLEN |
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[1103] | 245 | (( to_shift = $OPTIND - 1 )) |
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| 246 | shift $to_shift; file_to_send=$1 |
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[1] | 247 | |
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| 248 | |
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| 249 | # KURZE AUFRUFBESCHREIBUNG WIRD HIER AUSGEGEBEN |
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| 250 | if [ "$1" = "?" ] |
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| 251 | then |
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| 252 | (printf "\n *** subjob can be called as follows:\n" |
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| 253 | printf "\n subjob -c.. -d -D -h.. -m.. -q.. -t.. -u.. -v <jobfile>\n" |
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| 254 | printf "\n Description of available options:\n" |
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| 255 | printf "\n Option Description Default-Value" |
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| 256 | printf "\n -c job-input- and output-catalog ~/job_queue" |
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| 257 | printf "\n -d no job-protocol will be created ---" |
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| 258 | printf "\n -D only the job-file will be created ---" |
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| 259 | printf "\n -h execution host, available hosts: $remote_host" |
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[693] | 260 | printf "\n ibm, ibmh, ibmkisti, ibmku, ibms, ibmy, lc...," |
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[1040] | 261 | printf "\n lckiaps, lctit, nech, necriam, unics" |
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[1] | 262 | printf "\n -m memory demand per process in MByte ---" |
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| 263 | printf "\n -n jobname <jobdatei>" |
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| 264 | printf "\n -O threads per task (for OpenMP usage) 1" |
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[1094] | 265 | printf "\n -P ssh/scp port default port" |
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[1] | 266 | printf "\n -q job-queue to be used default" |
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| 267 | printf "\n -t allowed cpu-time in seconds ---" |
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| 268 | printf "\n -T tasks per node (on parallel hosts) ---" |
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| 269 | printf "\n -u username on execution host from .netrc" |
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| 270 | printf "\n -v no prompt for confirmation ---" |
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| 271 | printf "\n -X # of processors (on parallel hosts) 1" |
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| 272 | printf "\n " |
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| 273 | printf "\n The only possible positional parameter is <jobfile>:" |
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| 274 | printf "\n The complete NQS-job must be provided here." |
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| 275 | printf "\n <jobfile>=? creates this outline\n\n") | more |
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| 276 | exit |
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| 277 | fi |
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| 278 | |
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| 279 | |
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| 280 | |
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| 281 | # PRUEFEN, OB JOBDATEI ANGEGEBEN WURDE UND OB SIE AUCH EXISTIERT |
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| 282 | if [[ "$file_to_send" = "" ]] |
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| 283 | then |
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| 284 | printf "\n +++ job-file missing" |
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| 285 | locat=parameter; exit |
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| 286 | else |
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| 287 | if [[ -f $file_to_send ]] |
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| 288 | then |
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| 289 | true |
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| 290 | else |
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| 291 | printf "\n +++ job-file: " |
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| 292 | printf "\n $file_to_send" |
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| 293 | printf "\n does not exist" |
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| 294 | locat=parameter; exit |
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| 295 | fi |
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| 296 | fi |
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| 297 | |
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| 298 | |
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| 299 | |
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| 300 | # FALLS KEIN JOBNAME ANGEGEBEN WURDE, WIRD JOBNAME = JOBDATEINAME |
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| 301 | # GESETZT. VORAUSSETZUNG: JOBDATEINAME BEINHALTET KEINE PFADE |
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| 302 | if [[ $job_name = none ]] |
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| 303 | then |
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| 304 | job_name=$file_to_send |
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| 305 | fi |
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| 306 | if [[ $(echo $job_name | grep -c "/") != 0 ]] |
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| 307 | then |
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| 308 | printf "\n +++ job-file name: " |
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| 309 | printf "\n $job_name" |
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| 310 | printf "\n must not contain \"/\"-characters" |
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| 311 | locat=parameter; exit |
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| 312 | fi |
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| 313 | |
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| 314 | |
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| 315 | |
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| 316 | |
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| 317 | # HOSTSPEZIFISCHE GROESSEN VEREINBAREN BZW. ABBRUCH BEI UNZULAESSIGEM HOST |
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| 318 | # ODER WENN HOST NICHT ANGEGEBEN WURDE |
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| 319 | if [[ $remote_host = none ]] |
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| 320 | then |
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| 321 | printf "\n +++ host missing" |
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| 322 | locat=option; exit |
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| 323 | else |
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| 324 | case $remote_host in |
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[251] | 325 | (ibm) queue=p690_standard; remote_addres=134.76.99.81; submcom=/usr/lpp/LoadL/full/bin/llsubmit;; |
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[1184] | 326 | (ibmh) queue=cluster; remote_addres=136.172.40.15; submcom=/usr/lpp/LoadL/full/bin/llsubmit;; |
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[693] | 327 | (ibmkisti) queue=class.32plus; remote_addres=150.183.146.24; submcom=/usr/lpp/LoadL/full/bin/llsubmit;; |
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[622] | 328 | (ibmku) queue=s4; remote_addres=133.5.4.129; submcom=/usr/local/bin/llsubmit;; |
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[251] | 329 | (ibms) queue=p_normal; remote_addres=150.183.5.101; submcom=/usr/lpp/LoadL/full/bin/llsubmit;; |
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| 330 | (ibmy) queue=parallel; remote_addres=165.132.26.58; submcom=/usr/lpp/LoadL/full/bin/llsubmit;; |
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[1224] | 331 | (lccrayb) queue=testq; remote_addres=130.73.233.1; submcom=/opt/torque/4.2.4.1/bin/qsub;; |
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[1197] | 332 | (lccrayf) queue=small; remote_addres=86.50.166.21; submcom=/opt/slurm/default/bin/sbatch;; |
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[251] | 333 | (lcfimm) remote_addres=172.20.4.2; submcom=/opt/torque/bin/qsub;; |
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[1099] | 334 | (lcflow) remote_addres=10.140.1.71; submcom=/cm/shared/apps/sge/6.2u5p2/bin/lx26-amd64/qsub;; |
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[440] | 335 | (lckyoto) remote_addres=133.3.51.11; submcom=/thin/local/bin/qsub;; |
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[540] | 336 | (lcsgib) queue=smallq; remote_addres=130.73.232.104; submcom=/opt/moab/bin/msub;; |
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| 337 | (lcsgih) queue=smallq; remote_addres=130.75.4.101; submcom=/opt/moab/bin/msub;; |
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[367] | 338 | (lck) remote_addres=165.132.26.61; submcom=/usr/torque/bin/qsub;; |
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[1040] | 339 | (lckiaps) remote_addres=118.128.66.223; submcom=/cm/shared/apps/pbspro/11.0.2.110766/bin/qsub;; |
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[717] | 340 | (lckordi) remote_addres=210.219.61.8; submcom=/usr/torque/bin/qsub;; |
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[1099] | 341 | (lckyuh) remote_addres=133.5.4.33; submcom=/usr/bin/pjsub;; |
---|
[1090] | 342 | (lckyut) remote_addres=133.5.4.37; submcom=/usr/bin/pjsub;; |
---|
[1021] | 343 | (lcsb) remote_addres=147.46.30.151; submcom=/usr/torque/bin/qsub;; |
---|
[635] | 344 | (lctit) queue=S; remote_addres=10.1.6.165; submcom=/opt/pbs/tools/bin/t2sub;; |
---|
[892] | 345 | (lcxe6) remote_addres=129.177.20.113; submcom=/opt/torque/2.5.10/bin/qsub;; |
---|
[437] | 346 | (lcxt5m) remote_addres=193.166.211.144; submcom=/opt/pbs/10.1.0.91350/bin/qsub;; |
---|
[693] | 347 | (lcyon) remote_addres=165.132.26.68; submcom=/usr/torque/bin/qsub;; |
---|
[251] | 348 | (nech) qsubmem=memsz_job; qsubtime=cputim_job; remote_addres=136.172.44.147; submcom="/usr/local/bin/qsub";; |
---|
| 349 | (necriam) qsubmem=memsz_job; qsubtime=cputim_job; remote_addres=172.16.1.131; submcom="/usr/bin/nqsII/qsub";; |
---|
| 350 | (vpp) qsubmem=m; qsubtime=t; queue=vpp; remote_addres=130.75.4.130;; |
---|
| 351 | (unics) qsubmem=d; qsubtime=t; queue=unics; remote_addres=130.75.6.1;; |
---|
| 352 | (*) printf "\n +++ hostname \"$remote_host\" not allowed"; |
---|
| 353 | locat=parameter; exit;; |
---|
[1] | 354 | esac |
---|
| 355 | fi |
---|
| 356 | |
---|
| 357 | |
---|
| 358 | # EVTL. PRUEFEN, OB ANGEGEBENE QUEUE ZULAESSIG IST |
---|
| 359 | if [[ $no_default_queue != none ]] |
---|
| 360 | then |
---|
| 361 | error=false |
---|
| 362 | ndq=$no_default_queue |
---|
| 363 | case $remote_host in |
---|
| 364 | (ibm) case $ndq in |
---|
| 365 | (p690_express|p690_standard|p690_long) error=false;; |
---|
| 366 | (*) error=true;; |
---|
| 367 | esac;; |
---|
| 368 | (ibmh) case $ndq in |
---|
[1184] | 369 | (cluster|express) error=false;; |
---|
[1] | 370 | (*) error=true;; |
---|
| 371 | esac;; |
---|
[693] | 372 | (ibmkisti) case $ndq in |
---|
| 373 | (class.32plus|class.1-2|class.2-32) error=false;; |
---|
| 374 | (*) error=true;; |
---|
| 375 | esac;; |
---|
[622] | 376 | (ibmku) case $ndq in |
---|
| 377 | (sdbg1|sdbg2|sdbg4|s4|s16|s32|s32-s) error=false;; |
---|
| 378 | (*) error=true;; |
---|
| 379 | esac;; |
---|
[1] | 380 | (ibms) case $ndq in |
---|
| 381 | (express|normal|p_express|p_normal|p_normal_1.3|p_normal_1.7|grand) error=false;; |
---|
| 382 | (*) error=true;; |
---|
| 383 | esac;; |
---|
| 384 | (ibmy) case $ndq in |
---|
| 385 | (parallel) error=false;; |
---|
| 386 | (*) error=true;; |
---|
| 387 | esac;; |
---|
[1224] | 388 | (lccrayb) case $ndq in |
---|
| 389 | (mpp1q|mpp1testq|testq) error=false;; |
---|
| 390 | (*) error=true;; |
---|
| 391 | esac;; |
---|
[1197] | 392 | (lccrayf) case $ndq in |
---|
| 393 | (usup|test*|small|large) error=false;; |
---|
| 394 | (*) error=true;; |
---|
| 395 | esac;; |
---|
[1099] | 396 | (lcflow) case $ndq in |
---|
| 397 | (cfd_lom_long.q|cfd_him_long.q|cfd_lom_serl.q|cfd_lom_shrt.q|cfd_him_shrt.q) error=false;; |
---|
| 398 | (*) error=true;; |
---|
| 399 | esac;; |
---|
[1040] | 400 | (lckiaps) case $ndq in |
---|
| 401 | (express|normal) error=false;; |
---|
| 402 | (*) error=true;; |
---|
| 403 | esac;; |
---|
[440] | 404 | (lckyoto) case $ndq in |
---|
| 405 | (eh|ph) error=false;; |
---|
| 406 | (*) error=true;; |
---|
| 407 | esac;; |
---|
[1099] | 408 | (lckyuh) case $ndq in |
---|
| 409 | (fx-dbg|fx-single|fx-small|fx-middle|fx-large) error=false;; |
---|
| 410 | (*) error=true;; |
---|
| 411 | esac;; |
---|
[1090] | 412 | (lckyut) case $ndq in |
---|
| 413 | (cx-dbg|cx-single|cx-small|cx-middle|cx-large) error=false;; |
---|
| 414 | (*) error=true;; |
---|
| 415 | esac;; |
---|
[191] | 416 | (lcsgib|lcsgih) case $ndq in |
---|
[416] | 417 | (testq|serialq|smallq|mediumq|bigq|workq|dataq|permq|special1q) error=false;; |
---|
[191] | 418 | (*) error=true;; |
---|
| 419 | esac;; |
---|
[1] | 420 | (lctit) case $ndq in |
---|
[635] | 421 | (G|L128|L256|L512H|S|S96|V) error=false;; |
---|
[1] | 422 | (*) error=true;; |
---|
| 423 | esac;; |
---|
| 424 | (t3eb) case $ndq in |
---|
| 425 | (berte|p50|p100|p392|forfree|p25himem) error=false;; |
---|
| 426 | (*) error=true;; |
---|
| 427 | esac;; |
---|
[251] | 428 | (necriam) case $ndq in |
---|
[253] | 429 | (SP|SS|P6) error=false;; |
---|
[251] | 430 | (*) error=true;; |
---|
| 431 | esac;; |
---|
[1] | 432 | (t3eh) case $ndq in |
---|
| 433 | (para_t3e|em|k|l|lm|comp_t3e|c|p|ht) error=false;; |
---|
| 434 | (*) error=true;; |
---|
| 435 | esac;; |
---|
| 436 | (t3ej2|t3ej5) case $ndq in |
---|
| 437 | (low|normal|high) error=false;; |
---|
| 438 | (*) error=true;; |
---|
| 439 | esac;; |
---|
| 440 | (t3es) case $ndq in |
---|
| 441 | (batch|serial-4|pe4|p48|pe16|pe32|pe64|pe128) error=false;; |
---|
| 442 | (*) error=true;; |
---|
| 443 | esac;; |
---|
| 444 | (unics) case $ndq in |
---|
| 445 | (unics|ht) error=false;; |
---|
| 446 | (*) error=true;; |
---|
| 447 | esac;; |
---|
| 448 | esac |
---|
| 449 | if [[ $error = true ]] |
---|
| 450 | then |
---|
| 451 | printf "\n +++ queue \"$no_default_queue\" on host \"$remote_host\" not allowed" |
---|
| 452 | locat=parameter; exit |
---|
| 453 | else |
---|
| 454 | queue=$no_default_queue |
---|
| 455 | fi |
---|
| 456 | fi |
---|
| 457 | |
---|
| 458 | |
---|
| 459 | |
---|
| 460 | # PRUEFEN DER CPU-ZEIT, ZEIT NACH STUNDEN, MINUTEN UND SEKUNDEN |
---|
| 461 | # AUFTEILEN |
---|
| 462 | done=false |
---|
| 463 | while [[ $done = false ]] |
---|
| 464 | do |
---|
| 465 | if (( $cputime <= 0 )) |
---|
| 466 | then |
---|
| 467 | printf "\n +++ wrong cpu-time or cpu-time missing" |
---|
| 468 | printf "\n >>> Please type cpu-time in seconds as INTEGER:" |
---|
| 469 | printf "\n >>> " |
---|
| 470 | read cputime 1>/dev/null 2>&1 |
---|
| 471 | else |
---|
| 472 | done=true |
---|
| 473 | fi |
---|
| 474 | done |
---|
| 475 | if [[ $remote_host = nech ]] |
---|
| 476 | then |
---|
| 477 | if (( tasks_per_node != 0 )) |
---|
| 478 | then |
---|
| 479 | (( cputime = cputime * tasks_per_node )) |
---|
| 480 | elif [[ $numprocs != 0 ]] |
---|
| 481 | then |
---|
| 482 | (( cputime = cputime * numprocs )) |
---|
| 483 | fi |
---|
| 484 | fi |
---|
| 485 | (( stunden = cputime / 3600 )) |
---|
| 486 | (( resttime = cputime - stunden * 3600 )) |
---|
| 487 | (( minuten = resttime / 60 )) |
---|
| 488 | (( sekunden = resttime - minuten * 60 )) |
---|
| 489 | timestring=${stunden}:${minuten}:${sekunden} |
---|
| 490 | |
---|
| 491 | |
---|
| 492 | |
---|
| 493 | # PRUEFEN DER KERNSPEICHERANFORDERUNG |
---|
| 494 | done=false |
---|
| 495 | while [[ $done = false ]] |
---|
| 496 | do |
---|
| 497 | if (( memory <= 0 )) |
---|
| 498 | then |
---|
| 499 | printf "\n +++ wrong memory demand or memory demand missing" |
---|
| 500 | printf "\n >>> Please type memory in MByte per process as INTEGER:" |
---|
| 501 | printf "\n >>> " |
---|
| 502 | read memory 1>/dev/null 2>&1 |
---|
| 503 | else |
---|
| 504 | done=true |
---|
| 505 | fi |
---|
| 506 | done |
---|
| 507 | |
---|
[251] | 508 | if [[ $remote_host = nech || $remote_host = necriam ]] |
---|
[1] | 509 | then |
---|
| 510 | if (( tasks_per_node != 0 )) |
---|
| 511 | then |
---|
| 512 | (( Memory = memory * tasks_per_node / 1000 )) |
---|
| 513 | elif [[ $numprocs != 0 ]] |
---|
| 514 | then |
---|
| 515 | (( Memory = memory * numprocs / 1000 )) |
---|
| 516 | else |
---|
| 517 | (( Memory = memory / 1000 )) |
---|
| 518 | fi |
---|
[635] | 519 | elif [[ $remote_host = lctit ]] |
---|
| 520 | then |
---|
| 521 | (( Memory = memory * tasks_per_node / 1000 )) |
---|
[1] | 522 | fi |
---|
| 523 | |
---|
| 524 | |
---|
| 525 | # SPEICHERBERECHNUNG BEI OPENMP-NUTZUNG |
---|
| 526 | if [[ $(echo $remote_host | cut -c1-3) = ibm ]] |
---|
| 527 | then |
---|
| 528 | (( memory = memory * threads_per_task )) |
---|
| 529 | fi |
---|
| 530 | |
---|
| 531 | |
---|
| 532 | # BERECHNUNG DER ANZAHL DER ZU VERWENDENDEN KNOTEN |
---|
| 533 | if (( tasks_per_node != 0 )) |
---|
| 534 | then |
---|
[622] | 535 | (( nodes = numprocs / ( tasks_per_node * threads_per_task ) )) |
---|
[1] | 536 | fi |
---|
| 537 | |
---|
[1094] | 538 | |
---|
[622] | 539 | # Calculate number of processes per node |
---|
| 540 | (( processes_per_node = tasks_per_node * threads_per_task )) |
---|
[1] | 541 | |
---|
[1094] | 542 | |
---|
[696] | 543 | # Calculate number of MPI tasks |
---|
| 544 | (( mpi_tasks = numprocs / threads_per_task )) |
---|
[1] | 545 | |
---|
[696] | 546 | |
---|
[1094] | 547 | # Set port number option for calls of ssh/scp, subjob and batch_scp scripts |
---|
| 548 | if [[ "$scp_port" != "" ]] |
---|
| 549 | then |
---|
| 550 | PORTOPT="-P $scp_port" |
---|
| 551 | SSH_PORTOPT="-p $scp_port" |
---|
| 552 | fi |
---|
| 553 | |
---|
| 554 | |
---|
[1] | 555 | # HEADER-AUSGABE |
---|
| 556 | if [[ $verify = true ]] |
---|
| 557 | then |
---|
| 558 | printf "\n\n" |
---|
| 559 | printf "#--------------------------------------------------------------# \n" |
---|
| 560 | spalte1=SUBJOB;spalte2=$(date) |
---|
[1103] | 561 | printf "| %-20s%40s | \n" "$spalte1" "$spalte2" |
---|
[1] | 562 | printf "| | \n" |
---|
| 563 | printf "| values of parameters/options: | \n" |
---|
[1103] | 564 | spalte1=$(echo local_host$punkte | cut -c-20) |
---|
| 565 | spalte2=$punkte$local_host |
---|
| 566 | printf "| %-20s%40s | \n" "$spalte1" "${spalte2: -40}" |
---|
| 567 | spalte1=$(echo remote_host$punkte | cut -c-20) |
---|
| 568 | spalte2=$punkte$remote_host |
---|
| 569 | printf "| %-20s%40s | \n" "$spalte1" "${spalte2: -40}" |
---|
| 570 | spalte1=$(echo queue$punkte | cut -c-20) |
---|
| 571 | spalte2=$punkte$queue |
---|
| 572 | printf "| %-20s%40s | \n" "$spalte1" "${spalte2: -40}" |
---|
| 573 | spalte1=$(echo memory$punkte | cut -c-20) |
---|
| 574 | spalte2="$punkte$memory mb" |
---|
| 575 | printf "| %-20s%40s | \n" "$spalte1" "${spalte2: -40}" |
---|
| 576 | spalte1=$(echo cputime$punkte | cut -c-20) |
---|
| 577 | spalte2="$punkte$cputime sec" |
---|
| 578 | printf "| %-20s%40s | \n" "$spalte1" "${spalte2: -40}" |
---|
| 579 | spalte1=$(echo job_name$punkte | cut -c-20) |
---|
| 580 | spalte2="$punkte$job_name" |
---|
| 581 | printf "| %-20s%40s | \n" "$spalte1" "${spalte2: -40}" |
---|
[1] | 582 | printf "#--------------------------------------------------------------# \n\n" |
---|
| 583 | |
---|
| 584 | |
---|
| 585 | # KONTROLLABFRAGE, OB ALLES O.K. |
---|
| 586 | antwort="dummy" |
---|
| 587 | while [[ $antwort != y && $antwort != Y && $antwort != n && $antwort != N ]] |
---|
| 588 | do |
---|
| 589 | read antwort?" >>> continue (y/n) ? " |
---|
| 590 | done |
---|
| 591 | if [[ $antwort = n || $antwort = N ]] |
---|
| 592 | then |
---|
| 593 | locat=verify; exit |
---|
| 594 | fi |
---|
| 595 | printf "\n" |
---|
| 596 | fi |
---|
| 597 | |
---|
| 598 | |
---|
| 599 | |
---|
| 600 | # ZUFALLSKENNUNG GENERIEREN UND JOBNAMEN AUF ZIELRECHNER BESTIMMEN |
---|
| 601 | kennung=$RANDOM |
---|
| 602 | job_on_remhost=${job_name}_${kennung}_$local_host |
---|
| 603 | job_to_send=job_to_send_$kennung |
---|
| 604 | if [[ $delete_dayfile = false ]] |
---|
| 605 | then |
---|
| 606 | remote_dayfile=${local_host}_${job_name}_result_$kennung |
---|
| 607 | local_dayfile=${remote_host}_${job_name} |
---|
| 608 | else |
---|
| 609 | remote_dayfile=/dev/null |
---|
| 610 | fi |
---|
| 611 | |
---|
| 612 | |
---|
| 613 | |
---|
[622] | 614 | # Generate the batch job scripts (qsub/msub/LoadLeveler) |
---|
[1] | 615 | if [[ $(echo $remote_host | cut -c1-3) = ibm && $numprocs != 0 ]] |
---|
| 616 | then |
---|
| 617 | |
---|
[622] | 618 | # General LoadLeveler settings |
---|
| 619 | execute_in_shell="#!/bin/ksh" |
---|
| 620 | use_shell="# @ shell = /bin/ksh" |
---|
| 621 | consumable_memory="ConsumableMemory($memory mb)" |
---|
| 622 | class="# @ class = $queue" |
---|
| 623 | environment="# @ environment = OMP_NUM_THREADS=$threads_per_task; MP_SHARED_MEMORY=yes" |
---|
| 624 | network_to_use="# @ network.mpi = sn_all,shared,us" |
---|
| 625 | data_limit="# @ data_limit = 1.76gb" |
---|
| 626 | image_size="# @ image_size = 50" |
---|
[693] | 627 | wall_clock_limit="# @ wall_clock_limit = ${timestring},$timestring" |
---|
[312] | 628 | |
---|
[693] | 629 | if [[ $email_notification = none ]] |
---|
| 630 | then |
---|
| 631 | notify_user="" |
---|
| 632 | else |
---|
| 633 | notify_user="# @ notify_user = $email_notification" |
---|
| 634 | if [[ $delete_dayfile = true ]] |
---|
| 635 | then |
---|
| 636 | notification='# @ notification = never' |
---|
| 637 | fi |
---|
| 638 | fi |
---|
[622] | 639 | |
---|
[312] | 640 | if [[ $remote_host = ibmh ]] |
---|
[1] | 641 | then |
---|
[312] | 642 | data_limit="" |
---|
| 643 | network_to_use="" |
---|
[1184] | 644 | class="# @ class = $queue" |
---|
[312] | 645 | environment="" |
---|
[814] | 646 | rset="# @ rset = RSET_MCM_AFFINITY" |
---|
| 647 | task_affinity="# @ task_affinity = core(1)" |
---|
[693] | 648 | elif [[ $remote_host = ibmkisti ]] |
---|
| 649 | then |
---|
| 650 | network_to_use="# @ network.MPI = sn_all,shared,US" |
---|
| 651 | wall_clock_limit="# @ wall_clock_limit = $timestring" |
---|
[696] | 652 | if [[ $threads_per_task = 1 ]] |
---|
| 653 | then |
---|
| 654 | rset="# @ rset = RSET_MCM_AFFINITY" |
---|
| 655 | mcm_affinity_options="# @ mcm_affinity_options = mcm_mem_pref mcm_sni_none mcm_distribute" |
---|
| 656 | fi |
---|
[693] | 657 | environment="" |
---|
| 658 | use_shell="" |
---|
| 659 | data_limit="" |
---|
| 660 | image_size="" |
---|
[622] | 661 | elif [[ $remote_host = ibmku ]] |
---|
| 662 | then |
---|
| 663 | execute_in_shell="#!/usr/bin/ksh" |
---|
| 664 | use_shell="# @ shell = /usr/bin/ksh" |
---|
| 665 | consumable_memory="" |
---|
| 666 | environment="" |
---|
| 667 | network_to_use="# @ network.mpi = sn_all,shared,us" |
---|
| 668 | data_limit="" |
---|
| 669 | image_size="" |
---|
| 670 | elif [[ $remote_host = ibms ]] |
---|
| 671 | then |
---|
| 672 | network_to_use="# @ network.mpi = csss,shared,us" |
---|
| 673 | elif [[ $remote_host = ibmy ]] |
---|
| 674 | then |
---|
| 675 | consumable_memory="" |
---|
| 676 | network_to_use="" |
---|
[1] | 677 | fi |
---|
| 678 | |
---|
| 679 | cat > $job_to_send << %%END%% |
---|
[622] | 680 | $execute_in_shell |
---|
| 681 | $use_shell |
---|
[1] | 682 | |
---|
| 683 | # @ job_type = parallel |
---|
[693] | 684 | # @ job_name = $job_name |
---|
[1] | 685 | # @ resources = ConsumableCpus($threads_per_task) $consumable_memory |
---|
| 686 | # @ output = $remote_dayfile |
---|
| 687 | # @ error = $remote_dayfile |
---|
[693] | 688 | $wall_clock_limit |
---|
[622] | 689 | $image_size |
---|
[312] | 690 | $class |
---|
| 691 | $environment |
---|
[1] | 692 | $network_to_use |
---|
| 693 | $data_limit |
---|
[693] | 694 | $rset |
---|
| 695 | $mcm_affinity_options |
---|
[814] | 696 | $task_affinity |
---|
[1] | 697 | $notification |
---|
[693] | 698 | $notify_user |
---|
[1] | 699 | |
---|
| 700 | %%END%% |
---|
| 701 | |
---|
| 702 | if (( nodes > 0 )) |
---|
| 703 | then |
---|
| 704 | |
---|
[693] | 705 | if [[ $remote_host != ibmkisti ]] |
---|
| 706 | then |
---|
| 707 | |
---|
| 708 | cat >> $job_to_send << %%END%% |
---|
[1] | 709 | # @ node = $nodes |
---|
[622] | 710 | # @ tasks_per_node = $processes_per_node |
---|
[1] | 711 | # @ node_usage = $node_usage |
---|
| 712 | # @ queue |
---|
| 713 | |
---|
| 714 | %%END%% |
---|
| 715 | |
---|
[693] | 716 | else |
---|
| 717 | |
---|
| 718 | cat >> $job_to_send << %%END%% |
---|
[696] | 719 | # @ total_tasks = $mpi_tasks |
---|
[693] | 720 | # @ blocking = unlimited |
---|
| 721 | # @ queue |
---|
| 722 | |
---|
| 723 | %%END%% |
---|
| 724 | |
---|
| 725 | fi |
---|
| 726 | |
---|
[1] | 727 | else |
---|
| 728 | |
---|
| 729 | if [[ $remote_host != ibmy ]] |
---|
| 730 | then |
---|
| 731 | |
---|
| 732 | cat >> $job_to_send << %%END%% |
---|
| 733 | # @ blocking = unlimited |
---|
| 734 | # @ total_tasks = $numprocs |
---|
| 735 | # @ node_usage = $node_usage |
---|
| 736 | # @ queue |
---|
| 737 | |
---|
| 738 | %%END%% |
---|
| 739 | |
---|
| 740 | else |
---|
| 741 | |
---|
| 742 | cat >> $job_to_send << %%END%% |
---|
| 743 | # @ node = 1 |
---|
| 744 | # @ total_tasks = $numprocs |
---|
| 745 | # @ queue |
---|
| 746 | |
---|
| 747 | %%END%% |
---|
| 748 | |
---|
| 749 | fi |
---|
| 750 | |
---|
| 751 | fi |
---|
| 752 | |
---|
[696] | 753 | # workaround because of silly job filter on ibmkisti |
---|
| 754 | if [[ $remote_host = ibmkisti && $threads_per_task != 1 ]] |
---|
| 755 | then |
---|
| 756 | echo "export OMP_NUM_THREADS=$threads_per_task" >> $job_to_send |
---|
| 757 | fi |
---|
| 758 | |
---|
[1] | 759 | elif [[ $(echo $remote_host | cut -c1-3) = ibm && $numprocs = 0 ]] |
---|
| 760 | then |
---|
| 761 | |
---|
| 762 | cat > $job_to_send << %%END%% |
---|
| 763 | #!/bin/ksh |
---|
| 764 | |
---|
| 765 | # @ job_type = serial |
---|
| 766 | # @ node_usage = $node_usage |
---|
| 767 | # @ job_name = palm |
---|
| 768 | # @ wall_clock_limit = ${timestring},$timestring |
---|
| 769 | # @ resources = ConsumableCpus(1) ConsumableMemory(1 gb) |
---|
| 770 | # @ output = $remote_dayfile |
---|
| 771 | # @ error = $remote_dayfile |
---|
[312] | 772 | $class |
---|
[1] | 773 | $notification |
---|
| 774 | |
---|
| 775 | # @ queue |
---|
| 776 | |
---|
| 777 | %%END%% |
---|
| 778 | |
---|
[1224] | 779 | elif [[ $remote_host = lccrayb ]] |
---|
| 780 | then |
---|
| 781 | |
---|
| 782 | if [[ $numprocs != 0 ]] |
---|
| 783 | then |
---|
| 784 | cat > $job_to_send << %%END%% |
---|
| 785 | #!/bin/bash --login |
---|
| 786 | #PBS -N $job_name |
---|
| 787 | #PBS -l walltime=$timestring |
---|
| 788 | #PBS -l mppwidth=$numprocs |
---|
| 789 | #PBS -l mppnppn=$processes_per_node |
---|
| 790 | #PBS -o $remote_dayfile |
---|
| 791 | #PBS -j oe |
---|
| 792 | #PBS -q $queue |
---|
| 793 | |
---|
| 794 | $module_calls |
---|
| 795 | export ATP_ENABLED=0 |
---|
| 796 | export MPICH_GNI_BTE_MULTI_CHANNEL=disabled |
---|
| 797 | |
---|
| 798 | %%END%% |
---|
| 799 | |
---|
| 800 | else |
---|
| 801 | |
---|
| 802 | continue |
---|
| 803 | |
---|
| 804 | fi |
---|
| 805 | |
---|
[1197] | 806 | elif [[ $remote_host = lccrayf ]] |
---|
| 807 | then |
---|
| 808 | |
---|
| 809 | if [[ $numprocs != 0 ]] |
---|
| 810 | then |
---|
| 811 | cat > $job_to_send << %%END%% |
---|
| 812 | #!/bin/bash -l |
---|
| 813 | #SBATCH -J $job_name |
---|
| 814 | #SBATCH -t $timestring |
---|
| 815 | #SBATCH -N $nodes |
---|
| 816 | #SBATCH --ntasks-per-node=$processes_per_node |
---|
| 817 | #SBATCH -p $queue |
---|
| 818 | #SBATCH -o $remote_dayfile |
---|
| 819 | #SBATCH -e $remote_dayfile |
---|
| 820 | |
---|
| 821 | $init_cmds |
---|
| 822 | $module_calls |
---|
| 823 | |
---|
| 824 | %%END%% |
---|
| 825 | |
---|
| 826 | else |
---|
| 827 | cat > $job_to_send << %%END%% |
---|
| 828 | #!/bin/bash -l |
---|
| 829 | #SBATCH -J $job_name |
---|
| 830 | #SBATCH -t $timestring |
---|
| 831 | #SBATCH -l ncpus=1 |
---|
| 832 | #SBATCH -l pmem=${memory}mb |
---|
| 833 | #SBATCH -m abe |
---|
| 834 | #SBATCH -o $remote_dayfile |
---|
| 835 | #SBATCH -e $remote_dayfile |
---|
| 836 | |
---|
| 837 | $init_cmds |
---|
| 838 | $module_calls |
---|
| 839 | |
---|
| 840 | %%END%% |
---|
| 841 | |
---|
| 842 | fi |
---|
| 843 | |
---|
[108] | 844 | elif [[ $remote_host = lcfimm ]] |
---|
| 845 | then |
---|
| 846 | |
---|
| 847 | if [[ $numprocs != 0 ]] |
---|
| 848 | then |
---|
| 849 | cat > $job_to_send << %%END%% |
---|
| 850 | #!/bin/ksh |
---|
| 851 | #PBS -N $job_name |
---|
[552] | 852 | #PBS -A $project_account |
---|
[108] | 853 | #PBS -l walltime=$timestring |
---|
[622] | 854 | #PBS -l nodes=${nodes}:ppn=$processes_per_node |
---|
[108] | 855 | #PBS -l pmem=${memory}mb |
---|
| 856 | #PBS -m abe |
---|
| 857 | #PBS -o $remote_dayfile |
---|
| 858 | #PBS -j oe |
---|
| 859 | mpd & |
---|
| 860 | |
---|
| 861 | %%END%% |
---|
| 862 | |
---|
[168] | 863 | else |
---|
| 864 | cat > $job_to_send << %%END%% |
---|
| 865 | #!/bin/ksh |
---|
| 866 | #PBS -N $job_name |
---|
[552] | 867 | #PBS -A $project_account |
---|
[168] | 868 | #PBS -l walltime=$timestring |
---|
| 869 | #PBS -l ncpus=1 |
---|
| 870 | #PBS -l pmem=${memory}mb |
---|
| 871 | #PBS -m abe |
---|
| 872 | #PBS -o $remote_dayfile |
---|
| 873 | #PBS -j oe |
---|
| 874 | |
---|
| 875 | %%END%% |
---|
| 876 | |
---|
| 877 | fi |
---|
| 878 | |
---|
[1099] | 879 | elif [[ $remote_host = lcflow ]] |
---|
| 880 | then |
---|
[1202] | 881 | if [ $memory -gt 1800 ]; then |
---|
[1099] | 882 | use_himem="" |
---|
| 883 | else |
---|
| 884 | use_himem="#" |
---|
| 885 | fi |
---|
| 886 | if [[ $numprocs != 0 ]] |
---|
| 887 | then |
---|
[1202] | 888 | pe_set="#$ -pe impi41 $numprocs" |
---|
[1099] | 889 | else |
---|
[1202] | 890 | pe_set="#$ -pe impi41 1" |
---|
[1099] | 891 | fi |
---|
| 892 | if [[ $queue = default ]] |
---|
| 893 | then |
---|
| 894 | queue_set="" |
---|
| 895 | else |
---|
| 896 | queue_set="#$ -q $queue" |
---|
| 897 | fi |
---|
| 898 | [[ "$disc_space" = "" ]] && disc_space=50 |
---|
| 899 | |
---|
| 900 | cat > $job_to_send << %%END%% |
---|
| 901 | #!/bin/bash |
---|
| 902 | #$ -S /bin/bash |
---|
| 903 | #$ -N $job_name |
---|
| 904 | #$ -cwd |
---|
| 905 | #$ -l h_rt=$timestring |
---|
| 906 | #$ -l h_vmem=${memory}M |
---|
| 907 | #$ -o $remote_dayfile |
---|
| 908 | #$ -j y |
---|
| 909 | $pe_set |
---|
| 910 | #$ -R y |
---|
| 911 | ${use_himem}#$ -l highmem=true |
---|
| 912 | #$ -l h_fsize=${disc_space}G |
---|
| 913 | $queue_set |
---|
| 914 | |
---|
| 915 | %%END%% |
---|
| 916 | |
---|
[1021] | 917 | elif [[ $remote_host = lck || $remote_host = lckordi || $remote_host = lcsb ]] |
---|
[368] | 918 | then |
---|
| 919 | |
---|
| 920 | if [[ $numprocs != 0 ]] |
---|
| 921 | then |
---|
| 922 | cat > $job_to_send << %%END%% |
---|
| 923 | #!/bin/ksh |
---|
| 924 | #PBS -N $job_name |
---|
| 925 | #PBS -l walltime=$timestring |
---|
| 926 | #PBS -l ncpus=$numprocs |
---|
| 927 | #PBS -l pmem=${memory}mb |
---|
| 928 | #PBS -o $remote_dayfile |
---|
[1021] | 929 | #PBS -l nodes=$nodes:ppn=${processes_per_node} |
---|
[368] | 930 | #PBS -j oe |
---|
| 931 | |
---|
| 932 | mpd & |
---|
| 933 | |
---|
| 934 | %%END%% |
---|
| 935 | |
---|
| 936 | else |
---|
| 937 | cat > $job_to_send << %%END%% |
---|
| 938 | #!/bin/ksh |
---|
| 939 | #PBS -N $job_name |
---|
| 940 | #PBS -l walltime=$timestring |
---|
| 941 | #PBS -l ncpus=1 |
---|
| 942 | #PBS -l pmem=${memory}mb |
---|
| 943 | #PBS -o $remote_dayfile |
---|
| 944 | #PBS -j oe |
---|
| 945 | |
---|
| 946 | %%END%% |
---|
| 947 | |
---|
| 948 | fi |
---|
| 949 | |
---|
[1040] | 950 | elif [[ $remote_host = lckiaps ]] |
---|
| 951 | then |
---|
| 952 | |
---|
| 953 | if [[ $numprocs != 0 ]] |
---|
| 954 | then |
---|
| 955 | cat > $job_to_send << %%END%% |
---|
| 956 | #!/bin/ksh |
---|
| 957 | #PBS -N $job_name |
---|
| 958 | #PBS -l walltime=$timestring |
---|
| 959 | #PBS -l select=1:ncpus=$numprocs |
---|
| 960 | #PBS -l pmem=${memory}mb |
---|
| 961 | #PBS -q $queue |
---|
| 962 | #PBS -o $remote_dayfile |
---|
| 963 | #PBS -j oe |
---|
| 964 | #PBS -V |
---|
| 965 | |
---|
| 966 | %%END%% |
---|
| 967 | |
---|
| 968 | else |
---|
| 969 | cat > $job_to_send << %%END%% |
---|
| 970 | #!/bin/ksh |
---|
| 971 | #PBS -N $job_name |
---|
| 972 | #PBS -l walltime=$timestring |
---|
| 973 | #PBS -l ncpus=1 |
---|
| 974 | #PBS -l pmem=${memory}mb |
---|
| 975 | #PBS -o $remote_dayfile |
---|
| 976 | #PBS -j oe |
---|
| 977 | |
---|
| 978 | %%END%% |
---|
| 979 | |
---|
| 980 | fi |
---|
| 981 | |
---|
[693] | 982 | elif [[ $remote_host = lcyon ]] |
---|
| 983 | then |
---|
| 984 | |
---|
| 985 | if [[ $numprocs != 0 ]] |
---|
| 986 | then |
---|
| 987 | cat > $job_to_send << %%END%% |
---|
| 988 | #!/bin/ksh |
---|
| 989 | #PBS -N $job_name |
---|
| 990 | #PBS -l walltime=$timestring |
---|
| 991 | #PBS -l ncpus=$numprocs |
---|
| 992 | #PBS -l pmem=${memory}mb |
---|
| 993 | #PBS -o $remote_dayfile |
---|
| 994 | #PBS -j oe |
---|
| 995 | |
---|
| 996 | %%END%% |
---|
| 997 | |
---|
| 998 | else |
---|
| 999 | cat > $job_to_send << %%END%% |
---|
| 1000 | #!/bin/ksh |
---|
| 1001 | #PBS -N $job_name |
---|
| 1002 | #PBS -l walltime=$timestring |
---|
| 1003 | #PBS -l ncpus=1 |
---|
| 1004 | #PBS -l pmem=${memory}mb |
---|
| 1005 | #PBS -o $remote_dayfile |
---|
| 1006 | #PBS -j oe |
---|
| 1007 | |
---|
| 1008 | %%END%% |
---|
| 1009 | |
---|
| 1010 | fi |
---|
| 1011 | |
---|
[181] | 1012 | elif [[ $remote_host = lcsgih || $remote_host = lcsgib ]] |
---|
[179] | 1013 | then |
---|
| 1014 | |
---|
[376] | 1015 | if [[ "$sgi_feature" != "" ]] |
---|
| 1016 | then |
---|
| 1017 | feature_directive="#PBS -l feature=$sgi_feature" |
---|
| 1018 | else |
---|
| 1019 | feature_directive="" |
---|
| 1020 | fi |
---|
[799] | 1021 | |
---|
[416] | 1022 | if [[ $queue = dataq || $queue = permq ]] |
---|
[399] | 1023 | then |
---|
| 1024 | feature_directive="#PBS -l feature=data" |
---|
| 1025 | fi |
---|
[376] | 1026 | |
---|
[789] | 1027 | if [[ $queue = testq || $queue = mediumq || $queue = bigq || $queue = workq || $queue = dataq || $queue = permq || $queue = serialq || $queue = special1q ]] |
---|
[191] | 1028 | then |
---|
| 1029 | queue_directive="#PBS -q $queue" |
---|
| 1030 | else |
---|
| 1031 | queue_directive="" |
---|
| 1032 | fi |
---|
| 1033 | |
---|
[352] | 1034 | if [[ $email_notification = none ]] |
---|
| 1035 | then |
---|
| 1036 | email_directive="" |
---|
| 1037 | else |
---|
| 1038 | email_directive="#PBS -M $email_notification" |
---|
| 1039 | fi |
---|
| 1040 | |
---|
[179] | 1041 | if [[ $numprocs != 0 ]] |
---|
| 1042 | then |
---|
| 1043 | cat > $job_to_send << %%END%% |
---|
[181] | 1044 | #!/bin/bash |
---|
[179] | 1045 | #PBS -N $job_name |
---|
| 1046 | #PBS -l walltime=$timestring |
---|
[622] | 1047 | #PBS -l nodes=$nodes:ppn=${processes_per_node} |
---|
[181] | 1048 | #PBS -l naccesspolicy=$node_usage |
---|
[179] | 1049 | #PBS -o $remote_dayfile |
---|
| 1050 | #PBS -j oe |
---|
[376] | 1051 | $feature_directive |
---|
[191] | 1052 | $queue_directive |
---|
[352] | 1053 | $email_directive |
---|
[179] | 1054 | |
---|
[622] | 1055 | eval \`/sw/swdist/bin/modulesinit\` |
---|
| 1056 | #. /usr/share/modules/init/bash |
---|
[892] | 1057 | $init_cmds |
---|
[493] | 1058 | $module_calls |
---|
[374] | 1059 | |
---|
[181] | 1060 | echo ld_library_path=\$LD_LIBRARY_PATH |
---|
[179] | 1061 | |
---|
| 1062 | %%END%% |
---|
| 1063 | |
---|
| 1064 | else |
---|
| 1065 | cat > $job_to_send << %%END%% |
---|
| 1066 | #PBS -S /bin/bash |
---|
| 1067 | #PBS -N $job_name |
---|
| 1068 | #PBS -l walltime=$timestring |
---|
| 1069 | #PBS -l ncpus=1 |
---|
| 1070 | #PBS -o $remote_dayfile |
---|
[475] | 1071 | #PBS -j oe |
---|
[400] | 1072 | $queue_directive |
---|
| 1073 | $email_directive |
---|
[179] | 1074 | |
---|
[622] | 1075 | eval \`/sw/swdist/bin/modulesinit\` |
---|
| 1076 | #. /usr/share/modules/init/bash |
---|
[892] | 1077 | $init_cmds |
---|
[493] | 1078 | $module_calls |
---|
[475] | 1079 | |
---|
[179] | 1080 | %%END%% |
---|
| 1081 | |
---|
| 1082 | fi |
---|
| 1083 | |
---|
[892] | 1084 | elif [[ $remote_host = lcxe6 ]] |
---|
[164] | 1085 | then |
---|
| 1086 | |
---|
| 1087 | if [[ $numprocs != 0 ]] |
---|
| 1088 | then |
---|
| 1089 | cat > $job_to_send << %%END%% |
---|
[799] | 1090 | #!/bin/ksh |
---|
[164] | 1091 | #PBS -S /bin/ksh |
---|
| 1092 | #PBS -N $job_name |
---|
[552] | 1093 | #PBS -A $project_account |
---|
[206] | 1094 | #PBS -j oe |
---|
[164] | 1095 | #PBS -l walltime=$timestring |
---|
| 1096 | #PBS -l mppwidth=${numprocs} |
---|
[622] | 1097 | #PBS -l mppnppn=${processes_per_node} |
---|
[164] | 1098 | #PBS -m abe |
---|
| 1099 | #PBS -o $remote_dayfile |
---|
[492] | 1100 | $email_directive |
---|
[164] | 1101 | |
---|
[892] | 1102 | $init_cmds |
---|
[493] | 1103 | $module_calls |
---|
[343] | 1104 | |
---|
[164] | 1105 | %%END%% |
---|
| 1106 | |
---|
[108] | 1107 | else |
---|
| 1108 | cat > $job_to_send << %%END%% |
---|
| 1109 | #!/bin/ksh |
---|
[168] | 1110 | #PBS -S /bin/ksh |
---|
[108] | 1111 | #PBS -N $job_name |
---|
[552] | 1112 | #PBS -A $project_account |
---|
[206] | 1113 | #PBS -j oe |
---|
[108] | 1114 | #PBS -l walltime=$timestring |
---|
| 1115 | #PBS -l ncpus=1 |
---|
| 1116 | #PBS -l pmem=${memory}mb |
---|
| 1117 | #PBS -m abe |
---|
[492] | 1118 | $email_directive |
---|
[108] | 1119 | #PBS -o $remote_dayfile |
---|
| 1120 | |
---|
[892] | 1121 | $init_cmds |
---|
[493] | 1122 | $module_calls |
---|
[343] | 1123 | |
---|
[108] | 1124 | %%END%% |
---|
| 1125 | |
---|
| 1126 | fi |
---|
| 1127 | |
---|
[440] | 1128 | elif [[ $remote_host = lckyoto ]] |
---|
[437] | 1129 | then |
---|
| 1130 | |
---|
[440] | 1131 | cat > $job_to_send << %%END%% |
---|
[799] | 1132 | #!/bin/ksh |
---|
[440] | 1133 | # @\$-o $remote_dayfile |
---|
| 1134 | # @\$-eo -oi |
---|
| 1135 | # @\$-lP 16 |
---|
[799] | 1136 | # @\$-lp 1 |
---|
[440] | 1137 | # @\$-lm 28gb -llm unlimited -ls unlimited |
---|
| 1138 | # @\$-q $queue |
---|
| 1139 | # @\$-Pvn abs_pack |
---|
| 1140 | ##for intel? @\$-Pvn abs_unpack -Pvs unpack -Pvc unpack |
---|
| 1141 | #. /thin/local/etc/setprofile/intel-11.0.sh |
---|
| 1142 | #. /thin/local/etc/setprofile/mvapich2-1.4+intel-11.0.sh |
---|
| 1143 | . ~/.myprofile |
---|
| 1144 | #. /home2/t/t51254/palm/current_version/myprofile |
---|
| 1145 | #. /thin/apps/pgi/mpi.sh |
---|
| 1146 | # |
---|
| 1147 | env |
---|
| 1148 | # |
---|
| 1149 | set -x |
---|
| 1150 | |
---|
| 1151 | %%END%% |
---|
| 1152 | |
---|
| 1153 | elif [[ $remote_host = lcxt5m ]] |
---|
| 1154 | then |
---|
| 1155 | |
---|
[437] | 1156 | if [[ $numprocs != 0 ]] |
---|
| 1157 | then |
---|
| 1158 | cat > $job_to_send << %%END%% |
---|
[799] | 1159 | #!/bin/ksh |
---|
[437] | 1160 | #PBS -S /bin/ksh |
---|
| 1161 | #PBS -N $job_name |
---|
| 1162 | #PBS -j oe |
---|
| 1163 | #PBS -l walltime=$timestring |
---|
| 1164 | #PBS -l mppwidth=${numprocs} |
---|
[622] | 1165 | #PBS -l mppnppn=${processes_per_node} |
---|
[437] | 1166 | #PBS -m abe |
---|
| 1167 | #PBS -o $remote_dayfile |
---|
| 1168 | |
---|
[892] | 1169 | $init_cmds |
---|
[493] | 1170 | $module_calls |
---|
[437] | 1171 | |
---|
| 1172 | %%END%% |
---|
| 1173 | |
---|
| 1174 | else |
---|
| 1175 | cat > $job_to_send << %%END%% |
---|
| 1176 | #!/bin/ksh |
---|
| 1177 | #PBS -S /bin/ksh |
---|
| 1178 | #PBS -N $job_name |
---|
| 1179 | #PBS -j oe |
---|
| 1180 | #PBS -l walltime=$timestring |
---|
| 1181 | #PBS -l ncpus=1 |
---|
| 1182 | #PBS -l pmem=${memory}mb |
---|
| 1183 | #PBS -m abe |
---|
| 1184 | #PBS -o $remote_dayfile |
---|
| 1185 | |
---|
[892] | 1186 | $init_cmds |
---|
[493] | 1187 | $module_calls |
---|
[437] | 1188 | |
---|
| 1189 | %%END%% |
---|
| 1190 | |
---|
| 1191 | fi |
---|
| 1192 | |
---|
[1099] | 1193 | elif [[ $remote_host = lckyuh ]] |
---|
| 1194 | then |
---|
| 1195 | cat > $job_to_send << %%END%% |
---|
| 1196 | #!/bin/bash |
---|
| 1197 | #PJM -L "rscgrp=$queue" |
---|
| 1198 | #PJM -L "node=$nodes" |
---|
| 1199 | #PJM --mpi "proc=$numprocs" |
---|
| 1200 | #PJM -L "elapse=$timestring" |
---|
| 1201 | #PJM -o $remote_dayfile |
---|
| 1202 | #PJM -j |
---|
| 1203 | #PJM -X |
---|
| 1204 | #PJM --no-stging |
---|
| 1205 | |
---|
| 1206 | export LANG=en_US.UTF-8 |
---|
| 1207 | %%END%% |
---|
| 1208 | |
---|
[1090] | 1209 | elif [[ $remote_host = lckyut ]] |
---|
| 1210 | then |
---|
| 1211 | cat > $job_to_send << %%END%% |
---|
| 1212 | #!/bin/bash |
---|
[1099] | 1213 | #PJM -L "rscgrp=$queue" |
---|
[1090] | 1214 | #PJM -L "vnode=$numprocs" |
---|
| 1215 | #PJM -L "vnode-core=1" |
---|
| 1216 | #PJM -L "elapse=$timestring" |
---|
| 1217 | #PJM --mpi proc=$numprocs |
---|
| 1218 | #PJM -o $remote_dayfile |
---|
| 1219 | #PJM -j |
---|
[1099] | 1220 | #PJM -X |
---|
| 1221 | #PJM --no-stging |
---|
[1090] | 1222 | |
---|
| 1223 | export LANG=en_US.UTF-8 |
---|
| 1224 | %%END%% |
---|
| 1225 | |
---|
[1] | 1226 | elif [[ $remote_host = nech ]] |
---|
| 1227 | then |
---|
| 1228 | |
---|
| 1229 | if (( nodes > 1 )) |
---|
| 1230 | then |
---|
| 1231 | cat > $job_to_send << %%END%% |
---|
| 1232 | #!/bin/ksh |
---|
[622] | 1233 | #PBS -l cpunum_prc=$processes_per_node,cputim_job=$cputime |
---|
[1] | 1234 | #PBS -l ${qsubmem}=${Memory}gb |
---|
| 1235 | #PBS -b $nodes |
---|
| 1236 | #PBS -o $remote_dayfile |
---|
| 1237 | #PBS -N palm |
---|
| 1238 | #PBS -j o |
---|
| 1239 | #PBS -T mpisx |
---|
| 1240 | |
---|
| 1241 | %%END%% |
---|
| 1242 | |
---|
| 1243 | elif [[ $numprocs != 0 ]] |
---|
| 1244 | then |
---|
| 1245 | cat > $job_to_send << %%END%% |
---|
| 1246 | #!/bin/ksh |
---|
[622] | 1247 | #PBS -l cpunum_prc=$processes_per_node,cputim_job=$cputime |
---|
[1] | 1248 | #PBS -l ${qsubmem}=${Memory}gb |
---|
| 1249 | #PBS -o $remote_dayfile |
---|
| 1250 | #PBS -N palm |
---|
| 1251 | #PBS -j o |
---|
| 1252 | |
---|
| 1253 | %%END%% |
---|
| 1254 | |
---|
| 1255 | else |
---|
| 1256 | cat > $job_to_send << %%END%% |
---|
| 1257 | #!/bin/ksh |
---|
| 1258 | #PBS -l ${qsubmem}=${Memory}gb,${qsubtime}=$cputime |
---|
| 1259 | #PBS -o $remote_dayfile |
---|
| 1260 | #PBS -j o |
---|
| 1261 | |
---|
| 1262 | %%END%% |
---|
| 1263 | |
---|
| 1264 | fi |
---|
| 1265 | |
---|
[251] | 1266 | elif [[ $remote_host = necriam ]] |
---|
[35] | 1267 | then |
---|
| 1268 | |
---|
| 1269 | if (( nodes > 1 )) |
---|
| 1270 | then |
---|
| 1271 | cat > $job_to_send << %%END%% |
---|
| 1272 | #!/bin/ksh |
---|
| 1273 | #PBS -b $nodes |
---|
| 1274 | #PBS -o $remote_dayfile |
---|
[253] | 1275 | #PBS -N $job_name |
---|
[35] | 1276 | #PBS -j o |
---|
[251] | 1277 | #PBS -v MPIPROGINV=YES |
---|
[35] | 1278 | |
---|
| 1279 | %%END%% |
---|
| 1280 | |
---|
| 1281 | elif [[ $numprocs != 0 ]] |
---|
| 1282 | then |
---|
| 1283 | cat > $job_to_send << %%END%% |
---|
| 1284 | #!/bin/ksh |
---|
| 1285 | #PBS -q ${queue} |
---|
| 1286 | #PBS -o $remote_dayfile |
---|
[253] | 1287 | #PBS -N $job_name |
---|
[35] | 1288 | #PBS -j o |
---|
[251] | 1289 | #PBS -v MPIPROGINV=YES |
---|
[35] | 1290 | |
---|
| 1291 | %%END%% |
---|
| 1292 | |
---|
| 1293 | else |
---|
| 1294 | cat > $job_to_send << %%END%% |
---|
| 1295 | #!/bin/ksh |
---|
| 1296 | #PBS -o $remote_dayfile |
---|
| 1297 | #PBS -j o |
---|
| 1298 | |
---|
| 1299 | %%END%% |
---|
| 1300 | |
---|
| 1301 | fi |
---|
| 1302 | |
---|
[1] | 1303 | elif [[ $remote_host = lctit ]] |
---|
| 1304 | then |
---|
| 1305 | cat > $job_to_send << %%END%% |
---|
[635] | 1306 | #!/bin/ksh |
---|
[892] | 1307 | $init_cmds |
---|
[678] | 1308 | $module_calls |
---|
| 1309 | |
---|
[1] | 1310 | %%END%% |
---|
| 1311 | |
---|
| 1312 | # OPTIONEN FUER SUBMIT-KOMMANDO ZUSAMMENSTELLEN |
---|
[678] | 1313 | if [[ $tasks_per_node != $processes_per_node ]] |
---|
| 1314 | then |
---|
| 1315 | submcom="$submcom -W group_list=$group_number -N $job_name -l walltime=$timestring -l select=$nodes:ncpus=$processes_per_node:mpiprocs=$tasks_per_node:mem=${Memory}gb -o $remote_dayfile -j oe -q $queue " |
---|
| 1316 | else |
---|
| 1317 | submcom="$submcom -W group_list=$group_number -N $job_name -l walltime=$timestring -l select=$nodes:ncpus=$processes_per_node:mpiprocs=$tasks_per_node:mem=${Memory}gb -l place=scatter -o $remote_dayfile -j oe -q $queue " |
---|
| 1318 | fi |
---|
[1] | 1319 | |
---|
| 1320 | else |
---|
| 1321 | |
---|
| 1322 | cat > $job_to_send << %%END%% |
---|
| 1323 | # @\$-q ${queue} |
---|
| 1324 | # @\$-l${qsubtime} $timestring |
---|
| 1325 | # @\$-l${qsubmem} ${memory}mb |
---|
| 1326 | # @\$-o $remote_dayfile |
---|
| 1327 | # @\$-eo |
---|
| 1328 | |
---|
| 1329 | %%END%% |
---|
| 1330 | |
---|
| 1331 | fi |
---|
| 1332 | |
---|
| 1333 | |
---|
| 1334 | # BEI RECHNUNG AUF REMOTE-MASCHINEN RUECKTRANSFER DES DAYFILES PER TRAP |
---|
| 1335 | # BEI EXIT VERANLASSEN |
---|
| 1336 | # VEKTORRECHNER MUSS EIGENEN JOB STARTEN, DA DORT NOHUP NICHT FUNKTIONIERT |
---|
| 1337 | # AUF IBM IN SEOUL IST RUECKTRANSFER ZUR ZEIT GENERELL NICHT MOEGLICH |
---|
| 1338 | if [[ $delete_dayfile = false && $remote_host != $local_host ]] |
---|
| 1339 | then |
---|
| 1340 | echo "set +vx" >> $job_to_send |
---|
| 1341 | echo "trap '" >> $job_to_send |
---|
| 1342 | echo "set +vx" >> $job_to_send |
---|
[1099] | 1343 | if [[ $(echo $remote_host | cut -c1-3) = ibm || $(echo $remote_host | cut -c1-5) = lcsgi || $(echo $remote_host | cut -c1-3) = nec || $remote_host = lcflow || $remote_host = lckiaps || $remote_host = lckyu* ]] |
---|
[1] | 1344 | then |
---|
[622] | 1345 | if [[ $remote_host = ibmh ]] |
---|
[1] | 1346 | then |
---|
| 1347 | return_queue=c1 |
---|
[693] | 1348 | elif [[ $remote_host = ibmkisti ]] |
---|
| 1349 | then |
---|
| 1350 | return_queue=class.1-2 |
---|
[622] | 1351 | elif [[ $remote_host = ibmku ]] |
---|
| 1352 | then |
---|
| 1353 | return_queue=sdbg2 |
---|
[1] | 1354 | elif [[ $remote_host = ibms ]] |
---|
| 1355 | then |
---|
| 1356 | return_queue=p_normal |
---|
| 1357 | elif [[ $remote_host = ibmy ]] |
---|
| 1358 | then |
---|
| 1359 | return_queue=serial |
---|
[325] | 1360 | elif [[ $remote_host = lcsgih || $remote_host = lcsgib ]] |
---|
| 1361 | then |
---|
[326] | 1362 | return_queue=serialq |
---|
[251] | 1363 | elif [[ $remote_host = necriam ]] |
---|
[1] | 1364 | then |
---|
[253] | 1365 | return_queue=SP |
---|
[1040] | 1366 | elif [[ $remote_host = lckiaps ]] |
---|
| 1367 | then |
---|
| 1368 | return_queue=express |
---|
[1099] | 1369 | elif [[ $remote_host = lckyuh ]] |
---|
| 1370 | then |
---|
| 1371 | return_queue=cx-single |
---|
[1090] | 1372 | elif [[ $remote_host = lckyut ]] |
---|
| 1373 | then |
---|
| 1374 | return_queue=cx-single |
---|
[1] | 1375 | else |
---|
| 1376 | return_queue=unknown |
---|
| 1377 | fi |
---|
| 1378 | |
---|
| 1379 | if [[ $(echo $remote_host | cut -c1-3) = ibm ]] |
---|
| 1380 | then |
---|
| 1381 | |
---|
[622] | 1382 | if [[ $remote_host = ibmku ]] |
---|
| 1383 | then |
---|
| 1384 | echo "echo \"#!/usr/bin/ksh\" >> scpjob.$kennung" >> $job_to_send |
---|
| 1385 | echo "echo \"# @ shell = /usr/bin/ksh\" >> scpjob.$kennung" >> $job_to_send |
---|
| 1386 | else |
---|
| 1387 | echo "echo \"#!/bin/ksh\" >> scpjob.$kennung" >> $job_to_send |
---|
| 1388 | fi |
---|
[1] | 1389 | echo "echo \"# @ job_type = serial\" >> scpjob.$kennung" >> $job_to_send |
---|
| 1390 | echo "echo \"# @ job_name = transfer\" >> scpjob.$kennung" >> $job_to_send |
---|
| 1391 | echo "echo \"# @ resources = ConsumableCpus(1) ConsumableMemory(1 gb)\" >> scpjob.$kennung" >> $job_to_send |
---|
| 1392 | echo "echo \"# @ wall_clock_limit = 00:10:00,00:10:00\" >> scpjob.$kennung " >> $job_to_send |
---|
| 1393 | echo "echo \"# @ output = job_queue/last_job_transfer_protocol\" >> scpjob.$kennung" >> $job_to_send |
---|
| 1394 | echo "echo \"# @ error = job_queue/last_job_transfer_protocol\" >> scpjob.$kennung" >> $job_to_send |
---|
[312] | 1395 | if [[ $host != "ibmh" ]] |
---|
| 1396 | then |
---|
| 1397 | echo "echo \"# @ class = $return_queue\" >> scpjob.$kennung" >> $job_to_send |
---|
| 1398 | fi |
---|
[1] | 1399 | echo "echo \"# @ image_size = 10\" >> scpjob.$kennung" >> $job_to_send |
---|
| 1400 | echo "echo \"# @ notification = never\" >> scpjob.$kennung" >> $job_to_send |
---|
| 1401 | |
---|
| 1402 | echo "echo \"# @ queue\" >> scpjob.$kennung" >> $job_to_send |
---|
| 1403 | echo "echo \" \" >> scpjob.$kennung" >> $job_to_send |
---|
| 1404 | |
---|
| 1405 | echo "echo \"set -x\" >> scpjob.$kennung" >> $job_to_send |
---|
[1094] | 1406 | echo "echo \"batch_scp $PORTOPT -d -w 10 -u $local_user $local_addres ${job_catalog}/$remote_dayfile \\\"$job_catalog\\\" $local_dayfile\" >> scpjob.$kennung" >> $job_to_send |
---|
[622] | 1407 | if [[ $remote_host = ibmku ]] |
---|
| 1408 | then |
---|
| 1409 | echo "echo \"rm scpjob.$kennung\" >> scpjob.$kennung" >> $job_to_send |
---|
| 1410 | fi |
---|
[1] | 1411 | echo "echo \"exit\" >> scpjob.$kennung" >> $job_to_send |
---|
| 1412 | |
---|
| 1413 | elif [[ $remote_host = nech ]] |
---|
| 1414 | then |
---|
| 1415 | echo "cd /pf/b/${remote_user}/job_queue" >> $job_to_send |
---|
| 1416 | echo "cat > scpjob.$kennung << %%END%%" >> $job_to_send |
---|
| 1417 | echo "#PBS -l ${qsubmem}=1GB,${qsubtime}=100" >> $job_to_send |
---|
| 1418 | echo "#PBS -o last_job_transfer_protocol" >> $job_to_send |
---|
| 1419 | echo "#PBS -j o" >> $job_to_send |
---|
| 1420 | echo " " >> $job_to_send |
---|
| 1421 | echo "set -x" >> $job_to_send |
---|
| 1422 | echo "cd /pf/b/${remote_user}/job_queue" >> $job_to_send |
---|
[1094] | 1423 | echo "batch_scp $PORTOPT -d -w 10 -u $local_user $local_addres $remote_dayfile \"$job_catalog\" $local_dayfile" >> $job_to_send |
---|
[1] | 1424 | echo "[[ \"\$for_subjob_to_do\" != \"\" ]] && eval \$for_subjob_to_do" >> $job_to_send |
---|
| 1425 | echo "%%END%%" >> $job_to_send |
---|
| 1426 | |
---|
[251] | 1427 | elif [[ $remote_host = necriam ]] |
---|
[35] | 1428 | then |
---|
| 1429 | echo "cat > scpjob.$kennung << %%END%%" >> $job_to_send |
---|
| 1430 | echo "#PBS -q $return_queue" >> $job_to_send |
---|
| 1431 | echo "#PBS -o last_job_transfer_protocol" >> $job_to_send |
---|
| 1432 | echo "#PBS -j o" >> $job_to_send |
---|
| 1433 | echo " " >> $job_to_send |
---|
| 1434 | echo "set -x" >> $job_to_send |
---|
[1094] | 1435 | echo "batch_scp $PORTOPT -d -w 10 -u $local_user $local_addres $remote_dayfile \"$job_catalog\" $local_dayfile" >> $job_to_send |
---|
[35] | 1436 | echo "[[ \"\$for_subjob_to_do\" != \"\" ]] && eval \$for_subjob_to_do" >> $job_to_send |
---|
| 1437 | echo "%%END%%" >> $job_to_send |
---|
| 1438 | |
---|
[1099] | 1439 | elif [[ $remote_host = lckyuh ]] |
---|
| 1440 | then |
---|
| 1441 | echo "cat > scpjob.$kennung << %%END%%" >> $job_to_send |
---|
| 1442 | echo "#!/bin/bash" >> $job_to_send |
---|
| 1443 | echo "#PJM -L \"node=1\"" >> $job_to_send |
---|
| 1444 | echo "#PJM -L \"rscgrp=$return_queue\"" >> $job_to_send |
---|
| 1445 | echo "#PJM --no-stging" >> $job_to_send |
---|
| 1446 | echo "#PJM -L \"elapse=30:00\"" >> $job_to_send |
---|
| 1447 | echo "#PJM -o \$HOME/job_queue/last_job_transfer_protocol" >> $job_to_send |
---|
| 1448 | echo "#PJM -j" >> $job_to_send |
---|
| 1449 | echo " " >> $job_to_send |
---|
| 1450 | echo "export LANG=en_US.UTF-8" >> $job_to_send |
---|
| 1451 | echo "set -x" >> $job_to_send |
---|
| 1452 | echo "batch_scp $PORTOPT -d -w 10 -u $local_user $local_addres $remote_dayfile \"$job_catalog\" $local_dayfile" >> $job_to_send |
---|
| 1453 | echo "[[ \"\$for_subjob_to_do\" != \"\" ]] && eval \$for_subjob_to_do" >> $job_to_send |
---|
| 1454 | echo "%%END%%" >> $job_to_send |
---|
| 1455 | |
---|
[1090] | 1456 | elif [[ $remote_host = lckyut ]] |
---|
| 1457 | then |
---|
| 1458 | echo "cat > scpjob.$kennung << %%END%%" >> $job_to_send |
---|
| 1459 | echo "#!/bin/bash" >> $job_to_send |
---|
| 1460 | echo "#PJM -L \"vnode=1\"" >> $job_to_send |
---|
| 1461 | echo "#PJM -L \"rscgrp=$return_queue\"" >> $job_to_send |
---|
| 1462 | echo "#PJM --no-stging" >> $job_to_send |
---|
| 1463 | echo "#PJM -L \"elapse=30:00\"" >> $job_to_send |
---|
| 1464 | echo "#PJM -o \$HOME/job_queue/last_job_transfer_protocol" >> $job_to_send |
---|
| 1465 | echo "#PJM -j" >> $job_to_send |
---|
| 1466 | echo " " >> $job_to_send |
---|
| 1467 | echo "export LANG=en_US.UTF-8" >> $job_to_send |
---|
| 1468 | echo "set -x" >> $job_to_send |
---|
[1094] | 1469 | echo "batch_scp $PORTOPT -d -w 10 -u $local_user $local_addres $remote_dayfile \"$job_catalog\" $local_dayfile" >> $job_to_send |
---|
[1090] | 1470 | echo "[[ \"\$for_subjob_to_do\" != \"\" ]] && eval \$for_subjob_to_do" >> $job_to_send |
---|
| 1471 | echo "%%END%%" >> $job_to_send |
---|
| 1472 | |
---|
[181] | 1473 | elif [[ $(echo $remote_host | cut -c1-5) = lcsgi ]] |
---|
| 1474 | then |
---|
| 1475 | echo "cat > scpjob.$kennung << %%END%%" >> $job_to_send |
---|
| 1476 | echo "#!/bin/bash" >> $job_to_send |
---|
| 1477 | echo "#PBS -N job_protocol_transfer" >> $job_to_send |
---|
[325] | 1478 | echo "#PBS -l walltime=00:30:00" >> $job_to_send |
---|
[181] | 1479 | echo "#PBS -l nodes=1:ppn=1" >> $job_to_send |
---|
[366] | 1480 | echo "#PBS -l feature=data" >> $job_to_send |
---|
[181] | 1481 | echo "#PBS -o \$HOME/job_queue/last_job_transfer_protocol" >> $job_to_send |
---|
| 1482 | echo "#PBS -j oe" >> $job_to_send |
---|
| 1483 | echo " " >> $job_to_send |
---|
| 1484 | echo ". /usr/share/modules/init/bash" >> $job_to_send |
---|
| 1485 | echo "set -x" >> $job_to_send |
---|
[1094] | 1486 | echo "batch_scp $PORTOPT -d -w 10 -u $local_user $local_addres ${job_catalog}/$remote_dayfile \"$job_catalog\" $local_dayfile" >> $job_to_send |
---|
[181] | 1487 | echo "[[ \"\$for_subjob_to_do\" != \"\" ]] && eval \$for_subjob_to_do" >> $job_to_send |
---|
| 1488 | echo "%%END%%" >> $job_to_send |
---|
| 1489 | |
---|
[1099] | 1490 | elif [[ $remote_host = lcflow ]] |
---|
| 1491 | then |
---|
| 1492 | echo "cat > scpjob.${kennung}.tmp << %%END%%" >> $job_to_send |
---|
| 1493 | echo "#!/bin/bash" >> $job_to_send |
---|
| 1494 | echo "SGEPREFIX -S /bin/bash" >> $job_to_send |
---|
| 1495 | echo "SGEPREFIX -N transfer_$job_name" >> $job_to_send |
---|
| 1496 | echo "SGEPREFIX -cwd" >> $job_to_send |
---|
| 1497 | echo "SGEPREFIX -l h_rt=01:00:00" >> $job_to_send |
---|
[1202] | 1498 | echo "SGEPREFIX -l h_vmem=500M" >> $job_to_send |
---|
| 1499 | echo "SGEPREFIX -l excl_flow=false" >> $job_to_send |
---|
[1099] | 1500 | echo "SGEPREFIX -j y" >> $job_to_send |
---|
| 1501 | echo "SGEPREFIX -o ${local_host}_${job_name}_scpjob_$kennung" >> $job_to_send |
---|
| 1502 | echo " " >> $job_to_send |
---|
| 1503 | echo "set -x" >> $job_to_send |
---|
| 1504 | echo "export PALM_BIN=$PALM_BIN" | sed -e 's:'$HOME':$HOME:' >> $job_to_send |
---|
| 1505 | echo "export PATH=\$PATH:\$PALM_BIN" >> $job_to_send |
---|
| 1506 | echo "" >> $job_to_send |
---|
| 1507 | echo "batch_scp $PORTOPT -d -w 10 -u $local_user $local_addres ${job_catalog}/$remote_dayfile \"$job_catalog\" $local_dayfile" >> $job_to_send |
---|
| 1508 | echo "[[ \"\$for_subjob_to_do\" != \"\" ]] && eval \$for_subjob_to_do" >> $job_to_send |
---|
| 1509 | echo "rm -f scpjob.${kennung}" >> $job_to_send |
---|
| 1510 | echo "%%END%%" >> $job_to_send |
---|
| 1511 | echo "sed -e 's/SGEPREFIX/#$/g' scpjob.${kennung}.tmp > scpjob.${kennung}" >> $job_to_send |
---|
| 1512 | echo "rm -f scpjob.${kennung}.tmp" >> $job_to_send |
---|
| 1513 | |
---|
[1] | 1514 | else |
---|
| 1515 | |
---|
| 1516 | echo "cat > scpjob.$kennung << %%END%%" >> $job_to_send |
---|
| 1517 | echo "# @\\\$-q $return_queue" >> $job_to_send |
---|
| 1518 | echo "# @\\\$-l${qsubtime} 10" >> $job_to_send |
---|
| 1519 | echo "# @\\\$-l${qsubmem} 10mb" >> $job_to_send |
---|
| 1520 | if [[ $remote_host = t3ej2 || $remote_host = t3ej5 || $remote_host = t3es ]] |
---|
| 1521 | then |
---|
| 1522 | echo "# @\$-l mpp_p=0" >> $job_to_send |
---|
| 1523 | fi |
---|
| 1524 | echo '# @\$-lF 10mb' >> $job_to_send |
---|
| 1525 | # echo '# @\$-o /dev/null' >> $job_to_send |
---|
| 1526 | echo '# @\$-o job_queue/last_job_transfer_protocol' >> $job_to_send |
---|
| 1527 | echo '# @\\\$-eo' >> $job_to_send |
---|
| 1528 | echo " " >> $job_to_send |
---|
| 1529 | if [[ $remote_host = t3ej2 || $remote_host = t3ej5 ]] |
---|
| 1530 | then |
---|
| 1531 | echo "set +vx" >> $job_to_send |
---|
| 1532 | echo ". .profile" >> $job_to_send |
---|
| 1533 | fi |
---|
| 1534 | echo "set -x" >> $job_to_send |
---|
[1094] | 1535 | echo "batch_scp $PORTOPT -d -w 10 -u $local_user $local_addres ${job_catalog}/$remote_dayfile \"$job_catalog\" $local_dayfile > /dev/null" >> $job_to_send |
---|
[1] | 1536 | echo "[[ \"\$for_subjob_to_do\" != \"\" ]] && eval \$for_subjob_to_do" >> $job_to_send |
---|
| 1537 | echo "%%END%%" >> $job_to_send |
---|
| 1538 | fi |
---|
| 1539 | |
---|
| 1540 | if [[ $(echo $remote_host | cut -c1-3) = ibm ]] |
---|
| 1541 | then |
---|
| 1542 | echo "llsubmit scpjob.$kennung" >> $job_to_send |
---|
[181] | 1543 | elif [[ $(echo $remote_host | cut -c1-5) = lcsgi ]] |
---|
| 1544 | then |
---|
[748] | 1545 | echo "rm -rf \$HOME/job_queue/last_job_transfer_protocol" >> $job_to_send |
---|
| 1546 | echo "chmod u+x scpjob.$kennung" >> $job_to_send |
---|
| 1547 | echo "msub scpjob.$kennung" >> $job_to_send |
---|
[1] | 1548 | elif [[ $remote_host = t3eb || $remote_host = t3eh || $remote_host = t3ej2 || $remote_host = t3ej5 ]] |
---|
| 1549 | then |
---|
| 1550 | echo "qsub -J n scpjob.$kennung" >> $job_to_send |
---|
| 1551 | elif [[ $remote_host = t3es ]] |
---|
| 1552 | then |
---|
| 1553 | echo "qsub -J n -s /bin/ksh scpjob.$kennung" >> $job_to_send |
---|
[1043] | 1554 | elif [[ $remote_host = lckiaps ]] |
---|
| 1555 | then |
---|
| 1556 | echo "mv scpjob.$kennung $job_catalog" >> $job_to_send |
---|
[1094] | 1557 | echo "ssh $SSH_PORTOPT ${remote_username}@${remote_addres} \"$submcom ${job_catalog}/scpjob.$kennung\" " >> $job_to_send |
---|
[1043] | 1558 | echo "rm ${job_catalog}/scpjob.$kennung" >> $job_to_send |
---|
[1099] | 1559 | elif [[ $remote_host = lckyu* ]] |
---|
[1090] | 1560 | then |
---|
[1094] | 1561 | echo "scp $PORTOPT scpjob.$kennung ${remote_username}@${remote_addres}:job_queue" >> $job_to_send |
---|
| 1562 | echo "ssh $SSH_PORTOPT ${remote_username}@${remote_addres} \"cd job_queue; $submcom scpjob.$kennung; rm scpjob.$kennung\" " >> $job_to_send |
---|
[1099] | 1563 | elif [[ $remote_host = lcflow ]] |
---|
| 1564 | then |
---|
| 1565 | echo "mv scpjob.$kennung $job_catalog" >> $job_to_send |
---|
[1202] | 1566 | echo "/usr/bin/ssh ${remote_username}@${remote_addres} \"$init_cmds $module_calls cd $job_catalog; $submcom scpjob.$kennung\" " >> $job_to_send |
---|
[1] | 1567 | else |
---|
[1040] | 1568 | echo "$submcom scpjob.$kennung" >> $job_to_send |
---|
[1] | 1569 | fi |
---|
[1043] | 1570 | if [[ $remote_host != ibmku && $remote_host != lckiaps ]] |
---|
[622] | 1571 | then |
---|
| 1572 | echo "rm scpjob.$kennung" >> $job_to_send |
---|
| 1573 | fi |
---|
[1] | 1574 | if [[ $remote_host = nech ]] |
---|
| 1575 | then |
---|
| 1576 | echo "cd -" >> $job_to_send |
---|
| 1577 | fi |
---|
| 1578 | else |
---|
| 1579 | # echo "ftpcopy -d $local_addres ${job_catalog}/$remote_dayfile \"$job_catalog\" $local_dayfile" >> $job_to_send |
---|
| 1580 | echo "nohup ftpcopy -d -w 15 $local_addres ${job_catalog}/$remote_dayfile \"$job_catalog\" $local_dayfile > /dev/null &" >> $job_to_send |
---|
| 1581 | fi |
---|
| 1582 | echo "set -x" >> $job_to_send |
---|
| 1583 | echo " ' exit" >> $job_to_send |
---|
| 1584 | echo "set -x" >> $job_to_send |
---|
| 1585 | fi |
---|
| 1586 | |
---|
| 1587 | |
---|
| 1588 | |
---|
| 1589 | # EIGENTLICHE JOB-DATEI AN QSUB-KOMMANDOS ANHAENGEN |
---|
| 1590 | cat $file_to_send >> $job_to_send |
---|
[69] | 1591 | |
---|
[1] | 1592 | if [[ $remote_host = ibm ]] |
---|
| 1593 | then |
---|
| 1594 | echo " " >> $job_to_send |
---|
| 1595 | echo "exit" >> $job_to_send |
---|
| 1596 | fi |
---|
[635] | 1597 | |
---|
| 1598 | # remove job file |
---|
[1099] | 1599 | if [[ $remote_host = lctit || $remote_host = ibmku || $remote_host = lcflow ]] |
---|
[69] | 1600 | then |
---|
| 1601 | echo " " >> $job_to_send |
---|
| 1602 | echo "rm ~/job_queue/$job_on_remhost" >> $job_to_send |
---|
| 1603 | fi |
---|
[1] | 1604 | |
---|
| 1605 | |
---|
| 1606 | |
---|
| 1607 | # USER-NAME AUF ZIELRECHNER AUS .NETRC-DATEI ERMITTELN |
---|
| 1608 | if [[ -z $remote_user ]] |
---|
| 1609 | then |
---|
| 1610 | if [[ $remote_host = t3eb || $remote_host = t3eh || $remote_host = t3ej2 || $remote_host = t3ej5 || $remote_host = t3es || $remote_host = vpp ]] |
---|
| 1611 | then |
---|
| 1612 | grep $remote_addres ~/.netrc | read dum dum dum remote_user dum dum |
---|
| 1613 | fi |
---|
| 1614 | fi |
---|
| 1615 | |
---|
| 1616 | |
---|
| 1617 | |
---|
| 1618 | # JOB AUF ZIELRECHNER TRANSFERIEREN BZW. INS JOBVERZEICHNIS KOPIEREN |
---|
| 1619 | if [[ $no_submit = false ]] |
---|
| 1620 | then |
---|
| 1621 | if [[ $remote_host != $local_host ]] |
---|
| 1622 | then |
---|
| 1623 | [[ $verify = true ]] && printf "\n >>> transfering job to \"$remote_host\"..." |
---|
[82] | 1624 | if [[ $remote_host = ibms || $remote_host = ibmy ]] # ssh on ibms cannot handle "~/" |
---|
[1] | 1625 | then |
---|
[82] | 1626 | job_catalog_save=$job_catalog |
---|
| 1627 | job_catalog=job_queue |
---|
| 1628 | elif [[ $remote_host = nech ]] |
---|
| 1629 | then |
---|
| 1630 | job_catalog_save=$job_catalog |
---|
| 1631 | job_catalog=/hpf/b/${remote_user}/job_queue |
---|
| 1632 | fi |
---|
[1096] | 1633 | if [[ $remote_host = nech ]] |
---|
[82] | 1634 | then |
---|
| 1635 | # DATEIEN KOENNEN NUR UEBER DEN ARCHIVE-SERVER DES DKRZ |
---|
| 1636 | # TRANSFERIERT WERDEN |
---|
[1094] | 1637 | scp $PORTOPT $job_to_send ${remote_user}@136.172.44.205:${job_catalog}/$job_on_remhost |
---|
[1] | 1638 | else |
---|
[1094] | 1639 | scp $PORTOPT $job_to_send ${remote_user}@${remote_addres}:${job_catalog}/$job_on_remhost |
---|
[1] | 1640 | fi |
---|
[82] | 1641 | if [[ $? = 1 ]] |
---|
| 1642 | then |
---|
| 1643 | locat=scp; exit |
---|
| 1644 | fi |
---|
| 1645 | if [[ $remote_host = ibms ]] |
---|
| 1646 | then |
---|
| 1647 | job_catalog=$job_catalog_save |
---|
| 1648 | fi |
---|
[1] | 1649 | [[ $verify = true ]] && printf "\n >>> finished\n" |
---|
| 1650 | else |
---|
| 1651 | eval job_catalog=$job_catalog |
---|
| 1652 | cp $job_to_send ${job_catalog}/$job_on_remhost |
---|
| 1653 | fi |
---|
| 1654 | |
---|
| 1655 | |
---|
| 1656 | |
---|
| 1657 | # NQS- BZW. LOADLEVELER-JOB STARTEN |
---|
| 1658 | if [[ $remote_host != $local_host ]] |
---|
| 1659 | then |
---|
| 1660 | [[ $verify = true ]] && printf "\n >>> submitting job using \"qsub\"...\n" |
---|
[635] | 1661 | |
---|
| 1662 | if [[ $(echo $remote_host | cut -c1-5) = lcsgi && $prio = true ]] |
---|
[1] | 1663 | then |
---|
[635] | 1664 | printf "\n >>> submit with HLRN qos-feature hiprio...\n" |
---|
[1094] | 1665 | ssh $SSH_PORTOPT $remote_addres -l $remote_user "cd $job_catalog; $submcom -l qos=hiprio $job_on_remhost; rm $job_on_remhost" |
---|
[635] | 1666 | elif [[ $remote_host = ibmku ]] |
---|
| 1667 | then |
---|
[1094] | 1668 | ssh $SSH_PORTOPT $remote_addres -l $remote_user "cd $job_catalog; $submcom $job_on_remhost" |
---|
[1099] | 1669 | elif [[ $remote_host = lcflow ]] |
---|
| 1670 | then |
---|
[1202] | 1671 | /usr/bin/ssh $SSH_PORTOPT $remote_addres -l $remote_user "$init_cmds $module_calls cd $job_catalog; $submcom $job_on_remhost" |
---|
[1] | 1672 | else |
---|
[1094] | 1673 | ssh $SSH_PORTOPT $remote_addres -l $remote_user "cd $job_catalog; $submcom $job_on_remhost; rm $job_on_remhost" |
---|
[82] | 1674 | fi |
---|
[1] | 1675 | |
---|
| 1676 | [[ $verify = true ]] && printf " >>> o.k.\n" |
---|
| 1677 | else |
---|
| 1678 | cd $job_catalog |
---|
[1224] | 1679 | if [[ $(echo $local_host | cut -c1-5) = lcsgi || $(echo $local_host | cut -c1-3) = ibm || $(echo $local_host | cut -c1-6) = lccray ]] |
---|
[1] | 1680 | then |
---|
| 1681 | eval $submcom $job_on_remhost |
---|
[1099] | 1682 | elif [[ $local_host = lcfimm || $local_host = lctit || $localhost = lcxe6 || $localhost = lck || $localhost = lckordi || $localhost = lcyon || $localhost = lcsb || $localhost = lckyu* ]] |
---|
[108] | 1683 | then |
---|
[635] | 1684 | chmod u+x $job_on_remhost |
---|
[108] | 1685 | eval $submcom $job_on_remhost |
---|
[1] | 1686 | elif [[ $local_host = nech ]] |
---|
| 1687 | then |
---|
| 1688 | if [[ $queue = default ]] |
---|
| 1689 | then |
---|
[799] | 1690 | eval $submcom $job_on_remhost |
---|
[1] | 1691 | else |
---|
[799] | 1692 | eval $submcom -q $queue $job_on_remhost |
---|
[1] | 1693 | fi |
---|
| 1694 | else |
---|
| 1695 | qsub $job_on_remhost |
---|
| 1696 | fi |
---|
[622] | 1697 | |
---|
| 1698 | # Jobfile must not be deleted on lctit/ibmku!! This will be done |
---|
| 1699 | # only at the end of the job. |
---|
[1099] | 1700 | if [[ $local_host != lctit && $local_host != ibmku && $local_host != lcflow ]] |
---|
[622] | 1701 | then |
---|
| 1702 | rm $job_on_remhost |
---|
| 1703 | fi |
---|
[1] | 1704 | cd - > /dev/null |
---|
| 1705 | fi |
---|
| 1706 | fi |
---|
| 1707 | |
---|
| 1708 | |
---|
| 1709 | |
---|
| 1710 | # ABSCHLUSSARBEITEN |
---|
| 1711 | |
---|
| 1712 | if [[ $no_submit = false ]] |
---|
| 1713 | then |
---|
[1099] | 1714 | rm -f $job_to_send |
---|
[1] | 1715 | fi |
---|
| 1716 | [[ $verify = true ]] && printf "\n\n *** SUBJOB finished \n\n" |
---|