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source: palm/trunk/SCRIPTS/mrun @ 287

Last change on this file since 287 was 265, checked in by letzel, 16 years ago
mrun update for lctit
Property svn:keywords set to `Id Rev`
File size: 161.7 KB

Rev	Line
[71]	1	#!/bin/ksh
[66]	2	# mrun - Plot-Shellskript
[169]	3	# $Id: mrun 265 2009-03-23 12:16:31Z raasch $
[1]	4
	5	# Prozedur zum Starten von Modellaeufen
	6
	7	# letzte Aenderung:
	8	# 03/03/94 - Siggi - Entwicklungsbeginn
	9	# 21/03/94 - Siggi - Entwicklungsabschluss (Version 1.0)
	10	# 09/12/94 - Siggi - allexport unterbunden; statt dessen werden jetzt ein-
	11	# zelne Variable exportiert. Dies ist noetig, weil an-
	12	# sonsten irgendein Speicher ueberlaeuft und von mrun
	13	# aufgerufene Programme (z.B. stageout) mit Fehlern
	14	# abbrechen (too many arguments)
	15	# 20/06/95 - Siggi - noclobber muss explizit abgeschaltet, da jetzt
	16	# defaultmaessig im RRZN-Profile eingeschaltet
	17	# 10/06/97 - Siggi - Zusaetzliche Option -C bei cpp, damit // nicht
	18	# wegfallen
	19	# 25/04/00 - Siggi - Version 1.5
	20	# remote_addres und remote_user in return_addres bzw.
	21	# return_username umbenannt, return_username wird dem
	22	# mrun-Aufruf im Job ueber Option -U mitgegeben.
	23	# Neue Variable remote_username, die beim interaktiven
	24	# mrun-Aufruf zwingend ueber die neue Option -u oder
	25	# in der Konfigurationsdatei angegeben werden muss.
	26	# 08/02/01 - Siggi - Alle mrun-Meldungen ins englische uebersetzt,
	27	# Version 1.7
	28	# 05/05/02 - Siggi - Uebersetzungen mittels make-Mechanismus moeglich
	29	# 21/11/02 - Siggi - ENV-Variable XLFRTEOPTS wird vor Ausfuehrung auf
	30	# IBM gesetzt, um Record-Laenge der NAMELIST-Dateien,
	31	# zu bestimmen; Praeprozessoroptionen haben nun alle
	32	# die Form -Dtext=text, weil auf IBM sonst text durch
	33	# die leere Zeichenkette ersetzt wird
	34	# 01/08/03 - Siggi - Test of implementing dvrp+1PE on ibm
	35	# 07/01/04 - Siggi - additional preprocessor directive for ibm included
	36	# (-D$OMP=OMP) in order to avoid problems with
	37	# OMP_NUM_THREADS
	38	# 04/01/05 - Siggi - archiving on hanni and berni is done in separate
	39	# tar files, one for each node used
	40	# 07/01/04 - Siggi - old code for t3e, vpp and hpcs eliminated
	41	# 09/01/05 - Siggi - workaround for getting the IP address on gfdl3
	42	# 17/01/05 - Siggi - job for data transfer to local machine now within
	43	# job class c1 (HLRN)
	44	# 27/01/05 - Siggi - IP address workaround for gfdl3 removed
	45	# 28/01/05 - Siggi - tar-filenames on $PERM (HLRN) now include the
	46	# base filename and cycle number
	47	# 16/02/05 - Gerald - hababai validated
	48	# 14/03/05 - Siggi - abort on NEC after first runtime error (F_ERRCNT)
	49	# 29/03/05 - Marcus - berni*-en0 validated
	50	# 21/04/05 - Siggi - transfer-job-protocol for avs-data is no more stored
	51	# 24/04/05 - Siggi - netcdf support on lcmuk
	52	# 25/04/05 - Siggi - netcdf support on gfld3 (decalpha)
	53	# 11/05/05 - Siggi - files with non-numeric extensions (.xxx after cycle
	54	# number) can now be used within interactive runs
	55	# 12/05/05 - Siggi - netcdf support on ibm
	56	# 13/05/05 - Siggi - error in tar-filenames on $PERM (HLRN) removed
	57	# 18/05/05 - Siggi - netcdf support on nec
	58	# 24/05/05 - Siggi - netcdf support on ibms
	59	# 14/06/05 - Siggi - sleep interval after submit of restart job increased
	60	# to 30 seconds
	61	# 28/06/05 - Siggi - bora adjusted to new intel compiler (LD_LIBRARY_
	62	# PATH is temporarily set)
	63	# 07/09/05 - Siggi - setting of MP_EAGER_LIMIT switched off because it
	64	# caused warnings in the job protocol
	65	# 20/10/05 - Siggi - update of netcdf-version on decalpha (gfdl3)
	66	# 25/10/05 - Siggi - error in listing files for getting the cycle number
	67	# removed
	68	# 26/10/05 - Siggi - new paths for dvrp-library, transfer of catalogs
	69	# realized by file attribute trpe
	70	# 28/10/05 - Siggi - if existing, the file extension is output in case
	71	# of missing input file - no job abort in case of
	72	# missing input files with file extensions
	73	# (preliminary solution)
	74	# 31/10/05 - Siggi - data transfer from nech now within seperate job
	75	# 04/11/05 - Siggi - netcdf 3.6.0-p1 on ibmh/ibmb
	76	# 07/12/05 - Siggi - gallego and elephanta admitted
	77	# 30/12/05 - Siggi - gfdl5 (ibmy) admitted
	78	# 10/01/06 - Siggi - cpp directive for NetCDF 64bit support
	79	# 20/01/06 - Siggi - cpp directive for ibmy
	80	# 09/02/06 - Siggi - ibmy admitted for batch mode
	81	# 13/04/06 - Siggi - ostria admitted
	82	# 18/04/06 - Siggi - usage of OpenMP implemented (additional option -O)
	83	# 10/05/06 - Siggi - environment variable XLSMPOPTS set on IBM for
	84	# optimization of OpenMP runs (option stacksize is
	85	# necessary for large gridpoint numbers because
	86	# otherwise a segmentation fault occurs)
	87	# 23/05/05 - Siggi - lctit (SUN Fire X4600) admitted
	88	# 21/08/06 - Siggi - standard mrun path on scirocco is as on bora
	89	# 23/08/06 - Siggi - netcdf support for scirocco (notebook)
	90	# 20/09/06 - Marcus - add DVRP library on nech
	91	# 24/10/06 - Siggi - Environment variables for PALM steering are written
	92	# on local NAMELIST file ENVPAR
	93	# 24/11/06 - Siggi - levanto admitted, maestro switched to ifc 9.1
	94	# 28/11/06 - Siggi - call to interpret_config.x_levanto because of SuSe 10
	95	# 06/02/07 - Siggi - add DVRP library on lcmuk
	96	# 07/02/07 - Siggi - revision of source code handling, source code is
	97	# now expected in directory given by source_path and
	98	# not in the current working directory, source code
	99	# files provided in add_source_path are allways
	100	# compiled, source code to be compiled is allways
	101	# sampled in SOURCES_FOR_RUN_$fname which is a
	102	# subdirectory of the current working directory,
[5]	103	# -s TEST changed to -s WRITE_PERMIT or -s WP,
[1]	104	# adapted for RIAM (neck)
[5]	105	# bugfix for cycle number of output file (extout)
	106	# all hpmuk-related code removed
[14]	107	# 14/02/07 - Siggi - dvrp support for neck added
[21]	108	# 28/02/07 - Siggi - empty lines in configuration file are accepted
[26]	109	# mrun_path replaced by PALM_BIN,
	110	# all machines are calling interpret_config.x
[66]	111	# 14/03/07 - Siggi - fimm admitted, revision number added to terminal
	112	# output
[69]	113	# 16/03/07 - Siggi - adjustments for lctit
[78]	114	# 29/03/07 - Siggi - global revision transfered to batch job by new
	115	# option -G
[82]	116	# 30/03/07 - Siggi - compilation "by hand" removed, cpp-directives/options
	117	# + netcdf/dvrp-options are read from configuration
	118	# file, host identifier (local_host) is read from
	119	# config file, code related to ftp filetransfer
	120	# removed (incl. option -f)
[97]	121	# 19/06/07 - Siggi - time limit for cdata jobs increased
[102]	122	# 25/07/07 - Siggi - two sets of executables can be started on lcmuk,
	123	# if new option -Y (coupling) is given,
	124	# output of executables to aout_output removed,
	125	# messages are immediately written to stdout instead
[108]	126	# 03/08/07 - Marcus - add XOPT="-X $numprocs" for lcfimm
	127	# 09/08/07 - Marcus - workaround on lcfimm to propagate environment
	128	# variables out to the nodes in coupled mode -disabled-
	129	# 13/08/07 - Marcus - start local restart jobs per ssh on lcfimm
[109]	130	# 28/08/07 - Marcus - completely remove workaround on lcfimm to propagate
	131	# environment variables out to the nodes in coupled mode
[118]	132	# 15/10/07 - Siggi - Preliminary adjustments for lctit, based on Jin's
	133	# suggestions
[122]	134	# 19/10/07 - Marcus - further adjustments for lctit: add new optional
	135	# argument -g group_number, admit all sla* node_usage
	136	# queues
[129]	137	# 30/10/07 - Marcus - further adjustments for queues on lctit
[149]	138	# 14/02/08 - Bjoern - link of restart files with long file name possible
	139	# 28/02/08 - Marcus - If environment variable link_local_output is set to
	140	# true, mrun tries "ln -f" on local output and resorts
	141	# to "cp" or "cp -r" on error
[164]	142	# 15/04/08 - Siggi - argument -c introduced to most of the subjob calls,
	143	# which allows the user to choose his own job catalog
	144	# by setting job_catalog in the configuration file
	145	# (default is ~/job_queue),
[172]	146	# workaround for mpiexec with -env option,
[164]	147	# adjustments for lcxt4 (Bergen Center for Computational
	148	# Science)
[183]	149	# 22/05/08 - Marcus - If environment variable link_local_input is set to
	150	# true, mrun tries "ln -f" on local input and resorts
	151	# to "cp" or "cp -r" on error
[180]	152	# 27/05/08 - Siggi - PATH is set to PALM_BIN everywhere (missing so far)
[179]	153	# 14/07/08 - Siggi - adjustments for lcsgih
[188]	154	# 08/08/08 - Marcus - typo removed in lcxt4 branch
[204]	155	# 17/09/08 - Siggi - restart mechanism adjusted for lcsgi
[210]	156	# 02/10/08 - BjornM - argument "-Y" modified, adjustments for coupled runs
	157	# 21/10/08 - Siggi - bugfix for the case that -K has more than one
	158	# argument
[211]	159	# 08/11/08 - Siggi - bugfix for depository path settings in configuration
	160	# file
	161	# 11/11/08 - Siggi - rules for using user code files changed: user
	162	# code splitted into one file per subroutine,
	163	# user can provide his/her own makefile, only
	164	# default source-code filenames are allowed
[215]	165	# 14/11/08 - Siggi - cond1 and cond2 are part of the depository name
[221]	166	# 08/01/09 - Siggi - mpi module on sgi machines to be used can be set
	167	# with environment variable mpilib
[223]	168	# 13/01/09 - Siggi - totalview on hice/bice can be used in debug mode
	169	# using environment variable totalview
[246]	170	# 25/02/09 - Siggi - cputime-option (-t) is allowed to be omitted for
	171	# interactive runs
[253]	172	# 05/03/09 - Siggi - adjustments for new NEC-SX9 at RIAM (necriam)
[260]	173	# 16/03/09 - Siggi - dvrp_lib, dvrp_inc replaced by dvr_lib, dvr_inc,
	174	# dvr streaming server is automatically started using
	175	# new variable dvr_server and a configuration file
	176	# .dvrserver.config,
[261]	177	# processing of dvr output files using new script
	178	# process_dvr_output implemented, in order to make
	179	# dvr application more user friendly
[265]	180	# 20/03/09 - Marcus - update of n1ge command for lctit
[211]	181
[1]	182
	183	# VARIABLENVEREINBARUNGEN + DEFAULTWERTE
	184
	185	set +o allexport # SICHERHEITSHALBER UNTERBINDEN, DA SONST EVTL. STAGEOUT
	186	# NICHT LAUEFT (TOO MANY ARGUMENTS - PROBLEM)
	187	set +o noclobber # EXISTIERENDE DATEIEN DUERFEN UEBERSCHRIEBEN WERDEN
	188
	189	AddFilenames=""
	190	additional_conditions=""
	191	add_source_path=""
	192	afname=""
	193	archive_save=true
	194	archive_system=none
	195	compiler_name=""
	196	cond1=""
	197	cond2=""
	198	config_file=.mrun.config
[206]	199	coupled_dist=""
	200	coupled_mode="mpi1"
[1]	201	cpp_opts=""
[82]	202	cpp_options=""
[1]	203	cpumax=0
	204	cpurest=0
	205	delete_temporary_catalog=true
	206	do_batch=false
	207	do_compile=true
	208	do_remote=false
	209	do_stagein=true
	210	do_stageout=true
	211	do_trace=false
	212	email_notification=""
	213	exclude=""
	214	executable=""
	215	execution_error=false
[67]	216	fimm=false
[1]	217	fname=test
	218	fromhost=""
[78]	219	global_revision=""
[122]	220	group_number=none
[1]	221	host=""
	222	host_file=""
	223	hp=""
	224	ignore_archive_error=false
	225	input_list=""
	226	interpreted_config_file=""
[164]	227	job_catalog="~/job_queue"
[1]	228	job_on_file=""
	229	keep_data_from_previous_run=false
[183]	230	link_local_input=false
[149]	231	link_local_output=false
[1]	232	localhost_realname=$(hostname)
	233	local_compile=false
[260]	234	local_dvrserver_running=.FALSE.
[1]	235	locat=normal
	236	mainprog=""
	237	makefile=""
	238	mc=$0
	239	while [[ $(echo $mc \| grep -c "/") != 0 ]]
	240	do
	241	mc=`echo $mc \| cut -f2- -d"/"`
	242	done
	243	module_files=""
	244	mrun_script_name=$mc
[82]	245	netcdf_inc=""
	246	netcdf_lib=""
[1]	247	netcdf_support=false
	248	node_usage=default
	249	numprocs=""
[206]	250	numprocs_atmos=0
	251	numprocs_ocean=0
[1]	252	OOPT=""
	253	openmp=false
	254	output_list=""
	255	package_list=""
	256	punkte="..........................................................."
	257	queue=none
	258	read_from_config=""
[5]	259	restart_run=false
[146]	260	return_addres=$(nslookup `hostname` 2>&1 \| grep "Address:" \| tail -1 \| awk '{print $2}')
[1]	261	if [[ $return_addres = 130.75.105.158 ]]
	262	then
	263	return_addres=172.20.25.41
	264	echo "+++ WARNING: return_addres changed to $return_addres !!!!!"
	265	fi
	266	return_password=""
	267	return_username=$LOGNAME
	268	remotecall=false
	269	remote_username=""
[102]	270	run_coupled_model=false
[1]	271	run_mode=""
	272	scirocco=false
	273	store_on_archive_system=true
	274	striche=" ----------------------------------------------------------------------------"
	275	silent=false
	276	source_list=""
	277	source_path=SOURCE
	278	tasks_per_node=""
	279	threads_per_task=1
	280	tmpcreate=false
	281	tmp_data_catalog=""
	282	transfer_problems=false
	283	usern=$LOGNAME
	284	working_directory=`pwd`
	285	TOPT=""
	286	XOPT=""
	287	zeit=$( date \| cut -c 12-19 )
	288
	289	typeset -i iec=0 iic=0 iin=0 ioc=0 iout=0 memory=0 stagein_anz=0 stageout_anz=0
[206]	290	typeset -i cputime i ii iia iii iio icycle inode ival jobges jobsek maxcycle minuten nodes pes sekunden tp1
[1]	291
[66]	292	typeset -R30 calltime
[1]	293	typeset -L20 spalte1
	294	typeset -L40 spalte2
	295	typeset -L60 spalte3
	296	typeset -L35 string1=`date`
	297	typeset -L12 string2=$usern
	298	typeset -L12 string3=$localhost_realname
	299	typeset -L12 string4
	300	typeset -L12 string5
[201]	301	typeset -L30 version="MRUN 2.0 Rev$Rev: 265 $"
[1]	302
	303
	304
	305	# EINZELNE VARIABLE FUER HAUPTPROGRAMM EXPORTIEREN
	306	export cpurest fname host localhost return_addres return_username remotecall tasks_per_node
	307
	308	# FOLGENDE VARIABLEN MUESSEN FUER DIE INTERPRETATION DER KONFIGURATIONSDATEI
	309	# EXPORTIERT WERDEN
	310	export afname config_file cpp_opts cpumax do_batch do_trace fname fromhost
[127]	311	export group_number input_list memory numprocs output_list queue run_mode
[1]	312
	313
	314
	315	# FEHLERBEHANDLUNG
	316	# BEI EXIT:
[83]	317	trap 'rm -rf $working_directory/tmp_mrun
[69]	318	if [[ $locat != localhost ]]
[1]	319	then
[22]	320	# if [[ ! -f ${mrun_path}/statistik/mrun_statistik ]]
	321	# then
	322	# cat > ${mrun_path}/statistik/mrun_statistik << %STATEND%
	323	#MRUN-calls on $localhost
	324	#
	325	#date and time user localhost remotehost termination mrun-command
	326	#--------------------------------------------------------------------------------------------------------------------
	327	#%STATEND%
	328	# chmod 666 ${mrun_path}/statistik/mrun_statistik
	329	# fi
	330	#
	331	# # EINTRAG IN DIE STATISTIK-DATEI
	332	# string4=$host
	333	# string5=$locat
	334	# if [[ "$job_on_file" = "" && $locat != control_c && $locat != user_abort ]]
	335	# then
	336	# if [[ $do_batch = true ]]
	337	# then
	338	# printf "$string1$string2$string3$string4$string5$mrun_com \n" >> ${mrun_path}/statistik/mrun_statistik
	339	# else
	340	# printf "$string1$string2$string3$string4$string5$mc \n" >> ${mrun_path}/statistik/mrun_statistik
	341	# fi
	342	# fi
[69]	343	echo " " > /dev/null
[1]	344	fi
	345
	346	if [[ $locat != normal && $locat != control_c && $locat != local_compile ]]
	347	then
	348
	349	# EVENTUELLE ERROR-KOMMANDOS ABARBEITEN
	350	(( i = 0 ))
	351	while (( i < iec ))
	352	do
	353	(( i = i + 1 ))
	354	printf "\n *** Execution of ERROR-command:\n"
	355	printf " >>> ${err_command[$i]}\n"
	356	eval ${err_command[$i]}
	357	done
	358	if [[ -n $interpreted_config_file ]] then
	359	rm -rf $interpreted_config_file
	360	fi
[71]	361	if [[ -n .mrun_environment ]] then
	362	rm -rf .mrun_environment
	363	fi
[1]	364	if [[ $tmpcreate = true ]]
	365	then
	366	printf "\n *** Contents of \"$TEMPDIR\":\n"
	367	ls -al; cd
	368	[[ $delete_temporary_catalog = true ]] && rm -rf $TEMPDIR
	369	fi
[260]	370	if [[ "$dvrserver_id" != "" ]]
	371	then
	372	echo "+++ killing dvrserver_id=$dvrserver_id"
	373	kill $dvrserver_id
	374	fi
[1]	375	if [[ -f ~/job_queue/JOBINFO.$QSUB_REQID ]]
	376	then
	377	rm -rf ~/job_queue/JOBINFO.$QSUB_REQID
	378	fi
	379	printf "\n\n+++ MRUN killed \n\n"
	380	elif [[ $locat != control_c ]]
	381	then
	382	printf "\n\n --> all actions finished\n\n"
	383	printf " Bye, bye $usern !!\n\n"
	384	fi' exit
	385
	386
	387	# BEI TERMINAL-BREAK:
[83]	388	trap 'rm -rf $working_directory/tmp_mrun
[69]	389	[[ $tmpcreate = true ]] && (cd; rm -rf $TEMPDIR)
[1]	390	if [[ -f ~/job_queue/JOBINFO.$QSUB_REQID ]]
	391	then
	392	rm -rf ~/job_queue/JOBINFO.$QSUB_REQID
	393	fi
[260]	394	if [[ "$dvrserver_id" != "" ]]
	395	then
	396	echo "+++ killing dvrserver_id=$dvrserver_id"
	397	kill $dvrserver_id
	398	fi
[1]	399	printf "\n+++ MRUN killed by \"^C\" \n\n"
	400	locat=control_c
	401	exit
	402	' 2
	403
	404
[22]	405	# CHECK IF THE PATH FOR THE PALM BINARIES (SCRIPTS+UTILITY-PROGRAMS) HAS
	406	# BEEN SET
	407	if [[ "$PALM_BIN" = "" ]]
	408	then
	409	printf "\n +++ environment variable PALM_BIN has not been set"
	410	printf "\n please set it to the directory where the PALM scripts are located"
	411	locat=palm_bin; exit
	412	fi
[180]	413	export PATH=$PALM_BIN:$PATH
[22]	414
	415
[1]	416
	417	# SHELLSCRIPT-OPTIONEN EINLESEN UND KOMMANDO NEU ZUSAMMENSETZEN, FALLS ES
	418	# FUER FOLGEJOBS BENOETIGT WIRD
[206]	419	while getopts :a:AbBc:Cd:D:Fg:G:h:H:i:IkK:m:M:n:o:Op:P:q:r:R:s:St:T:u:U:vxX:Y: option
[1]	420	do
	421	case $option in
	422	(a) afname=$OPTARG;;
	423	(A) store_on_archive_system=false; mc="$mc -A";;
	424	(b) do_batch=true; mc="$mc -b";;
	425	(B) delete_temporary_catalog=false; mc="$mc -B";;
	426	(c) config_file=$OPTARG; mc="$mc -c$OPTARG";;
[5]	427	(C) restart_run=true; mc="$mc -C";;
[1]	428	(d) fname=$OPTARG; mc="$mc -d$OPTARG";;
[210]	429	(D) cpp_opts="$cpp_opts $OPTARG"; mc="$mc -D'$OPTARG'";;
[79]	430	(F) job_on_file="-D"; mc="$mc -F";;
[122]	431	(g) group_number=$OPTARG; mc="$mc -g$OPTARG";;
[78]	432	(G) global_revision=$OPTARG; mc="$mc -G'$OPTARG'";;
[1]	433	(h) host=$OPTARG; mc="$mc -h$OPTARG";;
	434	(H) fromhost=$OPTARG; mc="$mc -H$OPTARG";;
	435	(i) input_list=$OPTARG; mc="$mc -i'$OPTARG'";;
	436	(I) ignore_archive_error=true; mc="$mc -I";;
	437	(k) keep_data_from_previous_run=true; mc="$mc -k";;
[210]	438	(K) additional_conditions="$OPTARG"; mc="$mc -K'$OPTARG'";;
[1]	439	(m) memory=$OPTARG; mc="$mc -m$OPTARG";;
	440	(M) makefile=$OPTARG; mc="$mc -M$OPTARG";;
	441	(n) node_usage=$OPTARG; mc="$mc -n$OPTARG";;
	442	(o) output_list=$OPTARG; mc="$mc -o'$OPTARG'";;
	443	(O) use_openmp=true; mc="$mc -O";;
	444	(p) package_list=$OPTARG; mc="$mc -p'$OPTARG'";;
	445	(P) return_password=$OPTARG; mc="$mc -P$OPTARG";;
	446	(q) queue=$OPTARG; mc="$mc -q$OPTARG";;
	447	(r) run_mode=$OPTARG; mc="$mc -r'$OPTARG'";;
	448	(R) remotecall=true;return_addres=$OPTARG; mc="$mc -R$OPTARG";;
	449	(s) source_list=$OPTARG; mc="$mc -s'$OPTARG'";;
	450	(S) read_from_config=false; mc="$mc -S";;
	451	(t) cpumax=$OPTARG; mc="$mc -t$OPTARG";;
	452	(T) tasks_per_node=$OPTARG; mc="$mc -T$OPTARG";;
	453	(u) remote_username=$OPTARG; mc="$mc -u$OPTARG";;
	454	(U) return_username=$OPTARG; mc="$mc -U$OPTARG";;
	455	(v) silent=true; mc="$mc -v";;
	456	(x) do_trace=true;set -x; mc="$mc -x";;
	457	(X) numprocs=$OPTARG; mc="$mc -X$OPTARG";;
[206]	458	(Y) run_coupled_model=true; coupled_dist=$OPTARG; mc="$mc -Y'$OPTARG'";;
[1]	459	(\?) printf "\n +++ unknown option $OPTARG \n"
	460	printf "\n --> type \"$0 ?\" for available options \n"
	461	locat=parameter;exit;;
	462	esac
	463	done
	464
	465
	466	# EVTL. POSITIONSPARAMETER EINLESEN
	467	# ZUR ZEIT GIBT ES NUR DEN PARAMETER ? (=KURZINFO)
	468	shift OPTIND-1
	469
	470
	471	# KURZE AUFRUFBESCHREIBUNG WIRD HIER AUSGEGEBEN
	472	if [[ "$1" = "?" ]]
	473	then
	474	(printf "\n *** mrun can be called as follows:\n"
[206]	475	printf "\n $mrun_script_name -b -c.. -d.. -D.. -f.. -F -h.. -i.. -I -K.. -m.. -o.. -p.. -r.. -R -s.. -t.. -T.. -v -x -X.. -Y.. <modus>\n"
[1]	476	printf "\n Description of available options:\n"
	477	printf "\n Option Description Default-Value"
	478	printf "\n -a base name of input files equiv. -d"
	479	printf "\n -A no archiving when using file-attribute fl"
	480	printf "\n -b batch-job on local machine ---"
	481	printf "\n -B do not delete temporary directory at end ---"
	482	printf "\n -c configuration file .mrun.config"
	483	printf "\n -d base name of files attached to program test"
	484	printf "\n -D preprocessor(cpp)-directives \"\" "
	485	printf "\n -F create remote job file only ---"
	486	printf "\n -h execution host $localhost_realname"
	487	printf "\n -i INPUT control list \"\" "
	488	printf "\n -I archiving errors of previous batch-jobs"
	489	printf "\n will be ignored"
	490	printf "\n -k keep data from previous run"
	491	printf "\n -K additional conditions for controling"
	492	printf "\n usage of conditional code and"
	493	printf "\n env-variables in configuration file \"\" "
	494	printf "\n -m memory demand in MB (batch-jobs) 0 MB"
	495	printf "\n -M Makefile name Makefile"
	496	printf "\n -n node usage (shared/not_shared) depending on -h"
	497	printf "\n -o OUTPUT control list \"\" "
	498	printf "\n -O use OpenMP ---"
	499	printf "\n -p software package list \"\" "
	500	printf "\n -q queue \"$queue\" "
	501	printf "\n -r run control list (combines -i -o) \"\" "
	502	printf "\n -s filenames of routines to be compiled \"\" "
	503	printf "\n must end with .f, .f90, .F, or .c !"
	504	printf "\n use \"..\" for more than one file and wildcards"
	505	printf "\n -s TEST compiles all files with w-permit"
	506	printf "\n -S config file interpreted by shellscript ---"
	507	printf "\n -t allowed cpu-time in seconds (batch) 0"
	508	printf "\n -T tasks per node depending on -h"
	509	printf "\n -u username on remote machine \"\" "
	510	printf "\n -v no prompt for confirmation ---"
	511	printf "\n -x tracing of mrun for debug purposes ---"
	512	printf "\n -X # of processors (on parallel machines) 1"
[206]	513	printf "\n -Y run coupled model, \"#1 #2\" with"
	514	printf "\n #1 atmosphere and #2 ocean processors \"#/2 #/2\" depending on -X"
[1]	515	printf "\n "
	516	printf "\n Possible values of positional parameter <modus>:"
	517	printf "\n \"?\" - this outline \n\n") \| more
	518	exit
	519	elif [[ "$1" != "" ]]
	520	then
	521	printf "\n +++ positional parameter $1 unknown \n"
	522	locat=parameter; exit
	523	fi
	524
	525
	526
	527	# KURZE STARTMELDUNG
	528	printf "\n*** $version "
	529	printf "\n will be executed. Please wait ..."
	530
	531
[82]	532
	533	# PRUEFEN, OB KONFIGURATIONS-DATEI VORHANDEN
	534	if [[ ! -f $config_file ]]
	535	then
	536	printf "\n\n +++ configuration file: "
	537	printf "\n $config_file"
	538	printf "\n does not exist"
	539	locat=connect; exit
	540	fi
	541
	542
	543	# HOST-IDENTIFIER (local_host) AUS KONFIGURATIONSDATEI BESTIMMEN
	544	line=""
	545	grep "%host_identifier" $config_file > tmp_mrun
	546	while read line
	547	do
[206]	548	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
[82]	549	then
	550	HOSTNAME=`echo $line \| cut -d" " -s -f2`
	551	host_identifier=`echo $line \| cut -d" " -s -f3`
[83]	552	if [[ $localhost_realname = $HOSTNAME ]]
[82]	553	then
	554	localhost=$host_identifier
	555	break
	556	fi
	557	fi
	558	done < tmp_mrun
	559
	560	if [[ "$localhost" = "" ]]
	561	then
	562	printf "\n\n +++ no host identifier found in configuration file \"$config_file\""
	563	printf "\n for local host \"$localhost_realname\"."
	564	printf "\n Please add line"
	565	printf "\n \"\%host_identifier $localhost_realname <identifier>\""
	566	printf "\n to the configuration file."
	567	locat=localhost; exit
	568	fi
	569
	570
	571	# HOSTSPEZIFISCHE VARIABLEN SETZEN
	572	case $localhost_realname in
	573	(breg-en0\|berni-en0) archive_system=tivoli;;
	574	(cs*) archive_system=ut;;
	575	(fimm.bccs.uib.no) fimm=true;;
	576	(gate\|n-sx) PATH=$PALM_BIN:$PATH:/usr/bin/nqsII;;
	577	(hreg-en0\|hanni-en0) archive_system=tivoli;;
	578	(scirocco) scirocco=true;;
	579	esac
	580
	581
	582
[1]	583	# BASISNAME DER INPUT-DATEIEN GLEICH ALLGEMEINEM BASISNAMEN SETZEN,
	584	# WENN NICHT VOM BENUTZER ANDERS BESTIMMT
	585	[[ "$afname" = "" ]] && afname=$fname
	586
	587
	588	# EVTL. RUN-MODUS DEN I/O-LISTEN HINZUFUEGEN
	589	if [[ "$run_mode" != "" ]]
	590	then
	591	input_list="$input_list $run_mode"
	592	output_list="$output_list $run_mode"
	593	fi
	594
	595
	596	# RECHNERNAMEN ABSPEICHERN, VON DEM AUS JOB GESTARTET WIRD,
	597	# ALLERDINGS NUR DANN, WENN NICHT PER OPTION -H BEREITS EIN WERT
	598	# ZUGEWIESEN WURDE (MRUN MACHT DIES IMMER, WENN ES SELBST BATCH-JOBS
	599	# STARTET)
	600	if [[ "$fromhost" = "" ]]
	601	then
	602	fromhost=$localhost
	603	fi
	604
	605
	606	# PRUEFEN, OB MRUN NUR TESTWEISE AUF DER LOKALEN MASCHINE KOMPILIEREN SOLL
	607	if [[ "$source_list" = LOCAL_COMPILE_TEST ]]
	608	then
	609	source_list=TEST
	610	local_compile=true
	611	host=$localhost
	612	fi
	613
	614
	615	# PRUEFEN, OB AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL
	616	# WERT VON do_remote WIRD FUER DATEIVERBINDUNGEN BENOETIGT.
	617	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
	618	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
	619	if [[ -n $host && "$host" != $localhost ]]
	620	then
	621	do_batch=true
	622	do_remote=true
	623	case $host in
[251]	624	(ibm\|ibmb\|ibmh\|ibms\|ibmy\|nech\|necriam\|lcsgib\|lcsgih\|lctit\|unics\|lcxt4) true;;
[1]	625	(*) printf "\n"
[83]	626	printf "\n +++ sorry: execution of batch jobs on remote host \"$host\""
	627	printf "\n is not available"
[1]	628	locat=nqs; (( iec = 0 )); exit;;
	629	esac
	630	else
	631	host=$localhost
	632	fi
	633
	634
	635	# ZUSATZBEDINGUNGEN (OPTION -K) AUSWERTEN
	636	if [[ -n $additional_conditions ]]
	637	then
[69]	638	# echo $additional_conditions \| cut -d" " -f1-3 \| read cond1 cond2 dummy
	639	cond1=`echo $additional_conditions \| cut -d" " -f1`
	640	cond2=`echo $additional_conditions \| cut -d" " -s -f2`
	641	dummy=`echo $additional_conditions \| cut -d" " -s -f3`
[1]	642	if [[ -n $dummy ]]
	643	then
	644	printf "\n +++ more than 2 additional conditions given for Option \"-K\""
	645	locat=options; exit
	646	fi
	647	fi
	648
	649
[206]	650	# KOPPLUNGSEIGENSCHAFTEN (-Y) AUSWERTEN UND coupled_mode BESTIMMEN
	651	if [[ $run_coupled_model = true ]]
	652	then
	653
	654	if [[ -n $coupled_dist ]]
	655	then
	656
	657	numprocs_atmos=`echo $coupled_dist \| cut -d" " -s -f1`
	658	numprocs_ocean=`echo $coupled_dist \| cut -d" " -s -f2`
	659
	660	if (( $numprocs_ocean + $numprocs_atmos != $numprocs ))
	661	then
	662
	663	printf "\n +++ number of processors does not fit to specification by \"-Y\"."
	664	printf "\n PEs (total) : $numprocs"
	665	printf "\n PEs (atmosphere): $numprocs_atmos"
	666	printf "\n PEs (ocean) : $numprocs_ocean"
	667	locat=coupling; exit
	668
	669	# REARRANGING BECAUSE CURRENTLY ONLY 1:1 TOPOLOGIES ARE SUPPORTED
	670	# THIS SHOULD BE REMOVED IN FUTURE
	671	elif (( $numprocs_ocean != $numprocs_atmos ))
	672	then
	673
	674	printf "\n +++ currently only 1:1 topologies are supported"
	675	printf "\n PEs (total) : $numprocs"
	676	printf "\n PEs (atmosphere): $numprocs_atmos"
	677	printf "\n PEs (ocean) : $numprocs_ocean"
	678	(( numprocs_atmos = $numprocs / 2 ))
	679	(( numprocs_ocean = $numprocs / 2 ))
	680	printf "\n +++ rearranged topology to $numprocs_atmos:$numprocs_ocean"
	681
	682	fi
	683
	684	else
	685
	686	(( numprocs_ocean = $numprocs / 2 ))
	687	(( numprocs_atmos = $numprocs / 2 ))
	688
	689	fi
	690	coupled_dist=`echo "$numprocs_atmos $numprocs_ocean"`
	691
	692	# GET coupled_mode FROM THE CONFIG FILE
	693	line=""
	694	grep "%cpp_options.-D__mpi2.$host" $config_file > tmp_mrun
	695	while read line
	696	do
	697	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" && ( $(echo $line \| cut -d" " -s -f4) = $cond1 \|\| $(echo $line \| cut -d" " -s -f4) = $cond2 ) ]]
	698	then
	699	coupled_mode="mpi2"
	700	fi
	701	done < tmp_mrun
	702
	703	fi
	704
	705
[1]	706	# PRUEFEN, OB EVTL. BEI VORHERGEHENDEM LAUF (KETTENJOB) EINE
	707	# ARCHIVIERUNG FEHLGESCHLAGEN IST
	708	if [[ -f ~/job_queue/ARCHIVE_ERROR_$fname ]]
	709	then
	710	if [[ $ignore_archive_error = false ]]
	711	then
	712	printf "\n +++ data archiving of previous run failed"
	713	printf "\n see directory \~/job_queue on remote machine"
	714	locat=archive; exit
	715	else
	716	printf "\n +++ warning: data archiving in a previous run failed"
	717	printf "\n MRUN continues, trying to get backup copy"
	718	fi
	719	fi
	720
	721
	722
	723	# LESEN UND INTERPRETIEREN DER KONFIGURATIONS-DATEI VOM SHELLSCRIPT AUS
	724	# VORUEBERGEHEND ZWINGEND AUF LINUX-RECHNERN
	725	if [[ "$read_from_config" = false ]]
	726	then
	727
	728	[[ $silent = false ]] && printf "\n Reading the configuration file... "
	729	while read zeile
	730	do
	731	[[ $silent = false ]] && printf "."
	732
	733
	734	# ZUERST EVENTUELL VORKOMMENDE ENVIRONMENT-VARIABLEN DURCH IHRE WERTE
	735	# ERSETZEN
	736	eval zeile=\"$zeile\"
	737
	738
	739	# INTERPRETATION DER ZEILE
[21]	740	if [[ "$(echo $zeile)" = "" ]]
[1]	741	then
[21]	742	# LEERZEILE, KEINE AKTION
	743	continue
[1]	744
[21]	745	elif [[ "$(echo $zeile \| cut -c1)" = "#" ]]
	746	then
	747
[1]	748	# ZEILE IST KOMMENTARZEILE
	749	true
	750
	751	elif [[ "$(echo $zeile \| cut -c1)" = "%" ]]
	752	then
	753
	754	# ZEILE DEFINIERT ENVIRONMENT-VARIABLE
	755	zeile=$(echo $zeile \| cut -c2-)
[69]	756	# echo $zeile \| cut -d" " -f1-5 \| read var value for_host for_cond1 for_cond2
	757	var=`echo $zeile \| cut -d" " -f1`
	758	value=`echo $zeile \| cut -d" " -s -f2`
	759	for_host=`echo $zeile \| cut -d" " -s -f3`
	760	for_cond1=`echo $zeile \| cut -d" " -s -f4`
	761	for_cond2=`echo $zeile \| cut -d" " -s -f5`
[1]	762
	763	if [[ "$for_host" = "" \|\| ( "$for_host" = $host && "$for_cond1" = "$cond1" && "$for_cond2" = "$cond2" ) \|\| $(echo "$input_list$output_list"\|grep -c "$for_host") != 0 ]]
	764	then
	765
	766	# BEI COMPILER- CPP- ODER LINKEROPTIONEN EVTL ":" DURCH " "
	767	# ERSETZEN. "::" WIRD DURCH ":" ERSETZT.
	768	value=`echo $value \| sed 's/::/%DUM%/g' \| sed 's/:/ /g' \| sed 's/%DUM%/:/g'`
	769
	770
	771	# ENVIRONMENT-VARIABLE WIRD WERT AUS KONFIGURATIONSDATEI
	772	# ZUGEWIESEN, WENN SIE SELBST NOCH KEINEN WERT UEBER DIE
	773	# ENTSPRECHENDE SCRIPT-OPTION ERHALTEN HAT. SOLCHE
	774	# VARIABLEN HAETTEN DANN DEN WERT "" ODER IM INTEGER-FALL DEN
	775	# WERT 0. ALLGEMEINE REGEL ALSO: SCRIPT-OPTION GEHT UEBER
	776	# KONFIGURATIONSDATEI
	777	if [[ "$(eval echo \$$var)" = "" \|\| "$(eval echo \$$var)" = "0" ]]
	778	then
	779	eval $var=\$value
	780
	781	# EVTL. BILDSCHIRMAUSGABEN DER ENVIRONMENT-VARIABLEN
	782	if [[ $do_trace = true ]]
	783	then
	784	printf "\n*** ENVIRONMENT-VARIABLE $var = $value"
	785	fi
	786	fi
	787
	788	# WENN ENVIRONMENT-VARIABLE HOST VEREINBART, DANN SOFORT AUSWERTEN
	789	# WERT VON do-remote WIRD BEI DATEIVERBINDUNGEN BENOETIGT
	790	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
	791	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
	792	if [[ $var = host ]]
	793	then
	794	if [[ -n $host && "$host" != $localhost ]]
	795	then
	796	do_batch=true
	797	do_remote=true
	798	case $host in
[251]	799	(ibm\|ibms\|ibmy\|lcsgib\|lcsgih\|lctit\|nech\|necriam\|unics\|lcxt4) true;;
[83]	800	(*) printf "\n +++ sorry: execution of batch jobs on remote host \"$host\""
	801	printf "\n is not available"
[1]	802	locat=nqs; exit;;
	803	esac
	804	else
	805	host=$localhost
	806	fi
	807	fi
	808
	809	# VOM BENUTZER DEFINIERTE ENVIRONMENT VARIABLEN MUESSEN PRINZIPIELL
	810	# EXPORTIERT WERDEN, DA SIE VIELLEICHT IN WEITER UNTEN AUFZURUFEN-
	811	# DEN PROGRAMMEN BENOETIGT WERDEN
	812	export $var
	813	fi
	814
	815
	816
	817
	818	elif [[ "$(echo $zeile \| cut -c1-3)" = "EC:" ]]
	819	then
	820
	821	# ZEILE DEFINIERT ERROR-KOMMANDO
	822	(( iec = iec + 1 ))
	823	zeile=$(echo $zeile \| cut -c4-)
	824	err_command[$iec]="$zeile"
	825
	826	elif [[ "$(echo $zeile \| cut -c1-3)" = "IC:" ]]
	827	then
	828
	829	# ZEILE DEFINIERT INPUT-KOMMANDO
	830	(( iic = iic + 1 ))
	831	zeile=$(echo $zeile \| cut -c4-)
	832	in_command[$iic]="$zeile"
	833
	834	elif [[ "$(echo $zeile \| cut -c1-3)" = "OC:" ]]
	835	then
	836
	837	# ZEILE DEFINIERT OUTPUT-KOMMANDO
	838	(( ioc = ioc + 1 ))
	839	zeile=$(echo $zeile \| cut -c4-)
	840	out_command[$ioc]="$zeile"
	841
	842	else
	843
	844	# ZEILE DEFINIERT DATEIVERBINDUNG. EINLESEN DER DATEIEIGENSCHAFTEN
	845	# s2a: in/out - Feld
	846	# s2b: loc - Feld (optional)
	847	# s2c: tr/ar - Feld (optional)
[69]	848	# echo $zeile \| cut -d" " -f1-2 \| read s1 s2
	849	s1=`echo $zeile \| cut -d" " -f1`
	850	s2=`echo $zeile \| cut -d" " -s -f2`
[1]	851	s2a=$(echo $s2 \| cut -d":" -f1)
	852	if [[ $(echo $s2 \| grep -c ":") = 0 ]]
	853	then
	854	s2b=""
	855	s2c=""
	856	else
[69]	857	# echo $s2 \| cut -d":" -f2-3 \| sed 's/:/ /g' \| read s2b s2c
	858	s2b=`echo $s2 \| cut -d":" -f2 \| sed 's/:/ /g'`
	859	s2c=`echo $s2 \| cut -d":" -s -f3 \| sed 's/:/ /g'`
[1]	860	fi
[69]	861	# echo $zeile \| cut -d" " -f3-6 \| read s3 s4 s5 s6
	862	s3=`echo $zeile \| cut -d" " -f3`
	863	s4=`echo $zeile \| cut -d" " -s -f4`
	864	s5=`echo $zeile \| cut -d" " -s -f5`
	865	s6=`echo $zeile \| cut -d" " -s -f6`
[1]	866
	867
	868	# ABSPEICHERN DER DATEIVERBINDUNG, FALLS IN INPUT- ODER OUTPUT-LIST
	869	# VERMERKT. VARIABLE S3 KANN AUCH LISTE ENTHALTEN (FELDTRENNER ":")
	870	# DATEIVERBINDUNG WIRD DANN NICHT ABGESPEICHERT UND GEPRUEFT, WENN
	871	# PROGRAMMLAUF AUF REMOTE-MASCHINE ERFOLGT UND DATEI NUR LOKAL VOR-
	872	# HANDEN SEIN MUSS (D.H. s2b = loc)
	873	IFSALT="$IFS"; IFS="$IFS:"
	874	if [[ "$s2a" = in && ! ( $do_remote = true && ( "$s2b" = loc \|\| "$s2b" = locopt ) ) ]]
	875	then
	876	found=false
	877	for actual in $input_list
	878	do
	879	for formal in $s3
	880	do
	881	[[ $actual = $formal \|\| "$formal" = "-" ]] && found=true
	882	done
	883	done
	884	if [[ $found = true ]]
	885	then
	886	(( iin = iin + 1 ))
	887	localin[$iin]=$s1; transin[$iin]=$s2b; actionin[$iin]=$s2c;
	888	typein[$iin]=$s3; pathin[$iin]=$s4; endin[$iin]=$s5;
	889	extin[$iin]=$s6
	890	fi
	891	elif [[ "$s2a" = out && ! ( $do_remote = true && "$s2b" = loc ) ]]
	892	then
	893	found=false
	894	for actual in $output_list
	895	do
	896	for formal in $s3
	897	do
	898	[[ $actual = $formal \|\| "$formal" = "-" ]] && found=true
	899	done
	900	done
	901	if [[ $found = true ]]
	902	then
	903	(( iout = iout + 1 ))
	904	localout[$iout]=$s1; actionout[$iout]=$s2c; typeout[$iout]=$s3;
	905	pathout[$iout]=$s4; endout[$iout]=$s5; extout[$iout]=$s6
	906	fi
	907	elif [[ "$s2a" != in && "$s2a" != out ]]
	908	then
	909	printf "\n +++ I/O-attribute in configuration file $config_file has the invalid"
	910	printf "\n value \"$s2\". Only \"in\" and \"out\" are allowed!"
	911	locat=connect; exit
	912	fi
	913	IFS="$IFSALT"
	914	fi
	915	done < $config_file
	916
	917	else
	918
	919
	920	# INTERPRETATION DER KONFIGURATIONSDATEI MITTELS FORTRAN 90 - PROGRAMM
	921	[[ $silent = false ]] && printf "..."
	922	export cond1 cond2 config_file do_remote do_trace input_list localhost output_list
	923	export interpreted_config_file=.icf.$RANDOM
	924
	925
[69]	926
	927	# ENVIRONMENT-VARIABLEN FUER INTERPRET_CONFIG UEBER NAMELIST_DATEI ZUR
	928	# VERFUEGUNG STELLEN
	929	cat > .mrun_environment << %%END%%
	930	&mrun_environment cond1 = '$cond1', cond2 = '$cond2',
	931	config_file = '$config_file', do_remote = '$do_remote',
	932	do_trace = '$do_trace', host = '$host',
	933	input_list = '$input_list', icf = '$interpreted_config_file',
	934	localhost = '$localhost', output_list = '$output_list' /
	935
	936	%%END%%
	937
	938	# WERTE VON MRUN-OPTIONEN SICHERN UND DAMIT GEGEBENENFALLS SPAETER DIE
	939	# IN DER KONFIGURAIONSDATEI ANGEGEBENEN WERTE UEBERSTEUERN
	940	mrun_memory=$memory
[127]	941	mrun_group_number=$group_number
[69]	942	mrun_cpumax=$cpumax
	943	mrun_numprocs=$numprocs
	944
[251]	945	if [[ $localhost_realname = "sx-fep" ]]
[66]	946	then
[251]	947	/home/COAR/NC/raasch/pub/interpret_config_necriam.x
[66]	948	else
	949	interpret_config.x
	950	fi
[71]	951	rm .mrun_environment
[1]	952
[71]	953
[1]	954	# AUSFUEHRUNG DER GENERIERTEN SHELL-KOMMANDOS IN DIESER SHELL
	955	chmod u+x $interpreted_config_file
	956	export PATH=$PATH:.
	957	. $interpreted_config_file
[71]	958	rm $interpreted_config_file
[1]	959
[71]	960
[69]	961	# OPTIONSWERTE UEBERSTEUERN KONFIGURATIONSDATEI
[71]	962	[[ $mrun_memory != 0 ]] && memory=$mrun_memory
[127]	963	[[ "$mrun_group_number" != "none" ]] && group_number=$mrun_group_number
[71]	964	[[ $mrun_cpumax != 0 ]] && cpumax=$mrun_cpumax
	965	[[ "$mrun_numprocs" != "" ]] && numprocs=$mrun_numprocs
[69]	966
[1]	967	fi
	968
	969
	970	# QUELLTEXTVERZEICHNIS AUF LOKALER MASCHINE AUS KONFIGURATIONSDATEI
	971	# BESTIMMEN (WUERDE SONST EVTL. DAS VERZEICHNIS DES JEWEILS UNTER -h
	972	# ANGEGEBENEN REMOTE-RECHNERS SEIN)
	973	# BEI BATCH-JOBS SIND DIE ZU UEBERSETZENDEN PROGRAMMTEILE SCHON KOMPLETT
	974	if [[ "$SOURCES_COMPLETE" = "" ]]
	975	then
	976
	977	# ZUERST PRUEFEN, OB EIN GLOBALER QUELLTEXTPFAD FUER ALLE RECHNER
	978	# VEREINBART WURDE
	979	source_path=""
	980	line=""
	981	grep "%source_path" $config_file > tmp_mrun
	982	while read line
	983	do
	984	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
	985	then
	986	if [[ "$(echo $line \| cut -d" " -f3)" = "" ]]
	987	then
	988	global_source_path=`echo $line \| cut -d" " -f2`
	989	fi
	990	fi
	991	done < tmp_mrun
	992
	993	line=""
	994	found=false
	995	grep " $localhost" $config_file \| grep "%source_path" > tmp_mrun
	996	while read line
	997	do
	998	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
	999	then
	1000	if [[ $found = true ]]
	1001	then
	1002	printf "\n\n +++ more than one source path found in configuration file"
	1003	printf "\n for local host \"$localhost\" "
	1004	locat=source_path; exit
	1005	fi
	1006	source_path=`echo $line \| cut -d" " -f2`
	1007	found=true
	1008	fi
	1009	done < tmp_mrun
	1010	rm tmp_mrun
	1011
	1012	if [[ "$source_path" = "" ]]
	1013	then
	1014	if [[ "$global_source_path" != "" ]]
	1015	then
	1016	source_path=$global_source_path
	1017	else
	1018	printf "\n\n +++ no source path found in configuration file"
	1019	printf "\n for local host \"$localhost\" "
	1020	locat=source_path; exit
	1021	fi
	1022	fi
	1023	eval source_path=$source_path
	1024
	1025	if [[ ! -d $source_path ]]
	1026	then
	1027	printf "\n\n +++ source path \"$source_path\" on local host"
	1028	printf "\n \"$localhost\" does not exist"
	1029	locat=source_path; exit
	1030	fi
	1031
	1032	fi
	1033
	1034
[78]	1035	# GLOBALE REVISIONSNUMMER ERMITTELN (FORTSETZUNGSLAEUFEN WIRD DIESE
	1036	# DURCH OPTION -G MITGETEILT)
	1037	if [[ "$global_revision" = "" ]]
	1038	then
	1039	global_revision=`svnversion $source_path 2>/dev/null`
	1040	global_revision="Rev: $global_revision"
	1041	fi
[1]	1042
[78]	1043
[1]	1044	# NOCHMAL PRUEFEN, OB AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL
	1045	# (HOST KANN IN KONFIGURATIONSDATEI ANDERS FESTGELEGT WORDEN SEIN)
	1046	# WERT VON do_remote WIRD FUER DATEIVERBINDUNGEN BENOETIGT.
	1047	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
	1048	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
	1049	if [[ -n $host && "$host" != $localhost ]]
	1050	then
	1051	do_batch=true
	1052	do_remote=true
	1053	case $host in
[251]	1054	(ibm\|ibmb\|ibmh\|ibms\|ibmy\|lcsgib\|lcsgih\|lctit\|nech\|necriam\|unics\|lcxt4) true;;
[1]	1055	(*) printf "\n"
[83]	1056	printf "\n +++ sorry: execution of batch jobs on remote host \"$host\""
	1057	printf "\n is not available"
[1]	1058	locat=nqs; (( iec = 0 )); exit;;
	1059	esac
	1060	else
	1061	host=$localhost
	1062	fi
	1063
	1064
	1065	# PRUEFUNG EINIGER PROZESSORZAHLANGABEN BEI RECHNUNGEN AUF PARALLELRECHNERN
	1066	if [[ "$cond1" = parallel \|\| "$cond2" = parallel ]]
	1067	then
	1068
	1069	# PRUEFEN, OB DIE ANZAHL DER ZU VERWENDENDEN PES ANGEGEBEN WURDE
	1070	if [[ ! -n $numprocs ]]
	1071	then
	1072	printf "\n"
	1073	printf "\n +++ option \"-K parallel\" requires additional specification"
	1074	printf "\n of the number of processors to be used by"
	1075	printf "\n mrun-option \"-X\" or by environment-variable"
	1076	printf "\n \"numprocs\" in the configuration file"
	1077	locat=numprocs; (( iec = 0 )); exit
	1078	fi
	1079
	1080	# PRUEFEN, OB DIE PROZESSORANZAHL PRO KNOTEN ANGEGEBEN WURDE (GGF.
	1081	# DEFAULT-WERT SETZEN) UND OB SIE EIN GANZZAHLIGER TEILER DER
	1082	# GESAMTPROZESSORANZAHL IST
[251]	1083	if [[ $host = nech \|\| $host = necriam \|\| $host = ibmh \|\| $host = ibmb \|\| $host = ibms ]]
[1]	1084	then
	1085	[[ "$tasks_per_node" = "" ]] && tasks_per_node=6
	1086	(( ival = $tasks_per_node ))
	1087	(( pes = numprocs ))
	1088	# if [[ $(echo $package_list \| grep -c dvrp_graphics+1PE) = 1 ]]
	1089	# then
	1090	# (( pes = pes - 1 ))
	1091	# fi
	1092	(( ii = pes / ival ))
	1093	if (( pes - ii * ival > 0 ))
	1094	then
	1095	printf "\n"
	1096	printf "\n +++ tasks per node (option \"-T\") must be an integral"
	1097	printf "\n divisor of the total number of processors (option \"-X\")"
	1098	printf "\n values of this mrun-call: \"-T $tasks_per_node\" \"-X $numprocs\""
	1099	locat=tasks_per_node; (( iec = 0 )); exit
	1100	fi
	1101	fi
	1102
	1103	# IBMY HAT NUR EINEN KNOTEN
	1104	if [[ $host = ibmy ]]
	1105	then
	1106	if [[ "$tasks_per_node" != "" && "$tasks_per_node" != "$numprocs" ]]
	1107	then
	1108	printf "\n"
	1109	printf "\n +++ on ibmy, tasks per node (option \"-T\") must be equal to the"
	1110	printf "\n total number of processors (option \"-X\")"
	1111	printf "\n values of this mrun-call: \"-T $tasks_per_node\" \"-X $numprocs\""
	1112	locat=tasks_per_node; (( iec = 0 )); exit
	1113	fi
	1114	fi
	1115
	1116	# FALLS OPENMP PARALLELISIERUNG VERWENDET WERDEN SOLL, ANZAHL VON THREADS
	1117	# SETZEN UND ZAHL DER TASKS PRO KNOTEN AUF 1 SETZEN
	1118	if [[ $use_openmp = true ]]
	1119	then
	1120	threads_per_task=$tasks_per_node
	1121	tasks_per_node=1
	1122	fi
	1123	OOPT="-O $threads_per_task"
	1124	TOPT="-T $tasks_per_node"
	1125
	1126	# GESAMTZAHL DER KNOTEN BESTIMMEN
	1127	if [[ "$tasks_per_node" != "" ]]
	1128	then
	1129	(( nodes = numprocs / ( tasks_per_node * threads_per_task ) ))
	1130	fi
	1131
	1132	# PRUEFEN, OB NODE USAGE EINEN ERLAUBTEN WERT HAT BZW. DEN DEFAULT
	1133	# SETZEN
	1134	if [[ $node_usage = default ]]
	1135	then
	1136	if [[ $host = ibms ]]
	1137	then
	1138	node_usage=shared
[118]	1139	elif [[ $host = lctit ]]
	1140	then
[265]	1141	node_usage=RAM64GB
[181]	1142	elif [[ $(echo $host \| cut -c1-5) = lcsgi ]]
	1143	then
	1144	node_usage=singlejob
[1]	1145	else
	1146	node_usage=not_shared
	1147	fi
	1148	fi
[181]	1149
[265]	1150	if [[ $node_usage != shared && $node_usage != not_shared && $node_usage != singlejob && "$(echo $node_usage \| cut -c1-3)" != "sla" && $node_usage != RAM64GB ]]
[1]	1151	then
	1152	printf "\n"
	1153	printf "\n +++ node usage (option \"-n\") is only allowed to be set"
	1154	printf "\n \"shared\" or \"not_shared\""
	1155	locat=tasks_per_node; (( iec = 0 )); exit
	1156	fi
	1157
	1158	fi
	1159
	1160	# PRUEFEN, OB HOSTFILE EXISTIERT
	1161	if [[ -n $hostfile ]]
	1162	then
	1163	if [[ ! -f $hostfile ]]
	1164	then
	1165	printf "\n"
	1166	printf "\n +++ hostfile \"$hostfile\" does not exist"
	1167	locat=hostfile; exit
	1168	fi
	1169	fi
	1170
	1171	# PRUEFEN, OB RHOSTS DATEI EXISTIERT. GEGEBENENFALLS ANLEGEN BZW. ERWEITERN
	1172	if [[ $host = ibmy && $do_remote = false ]]
	1173	then
	1174	if [[ ! -f $HOME/.rhosts ]]
	1175	then
	1176	echo "gfdl5.yonsei.ac.kr" > $HOME/.rhosts
	1177	printf "\n\n *** file:"
	1178	printf "\n $HOME/.rhosts"
	1179	printf "\n was created\n"
	1180	fi
	1181	if [[ $(grep -c gfdl5.yonsei.ac.kr $HOME/.rhosts) = 0 ]]
	1182	then
	1183	echo "gfdl5.yonsei.ac.kr" >> $HOME/.rhosts
	1184	printf "\n\n *** file:"
	1185	printf "\n $HOME/.rhosts"
	1186	printf "\n was extended by the name of the current host\n"
	1187	fi
	1188	fi
	1189
	1190
	1191
	1192	# FALLS NICHT VORGEGEBEN, DEFAULT-QUEUE AUF DER ZIELMASCHINE FESTLEGEN
	1193	if [[ $queue = none ]]
	1194	then
	1195	case $host in
	1196	(ibmb) if [[ $node_usage = shared ]]
	1197	then
	1198	queue=cshare
	1199	else
	1200	queue=csolo
	1201	fi;;
	1202	(ibmh) if [[ $node_usage = shared ]]
	1203	then
	1204	queue=cshare
	1205	else
	1206	queue=csolo
	1207	fi;;
	1208	(ibmy) queue=parallel;;
[191]	1209	(lcsgib) queue=bigq;;
	1210	(lcsgih) queue=bigq;;
[265]	1211	(lctit) queue=RAM64GB;;
[1]	1212	(nech) queue=none;;
[253]	1213	(necriam) queue=SP;;
[1]	1214	(unics) queue=unics;;
	1215	esac
	1216	fi
	1217
	1218
	1219	# VOLLSTAENDIGE DATEINAMEN DER INPUT-FILES BILDEN,
	1220	# INPUT-DATEIEN AUF VORHANDENSEIN PRUEFEN UND EVTL. HOECHSTE ZYKLUSNUMMER
	1221	# ERMITTELN
	1222	(( i = 0 ))
	1223	while (( i < iin ))
	1224	do
	1225	(( i = i + 1 ))
	1226	(( maxcycle = 0 ))
	1227
	1228	# NAMENSBILDUNG (EVTL. IST FESTER DATEINAME VORGEGEBEN)
	1229	if [[ "${actionin[$i]}" = di ]]
	1230	then
	1231	remotepathin[$i]=${pathin[$i]}/${endin[$i]} # REMOTE-PFAD ERST AUF
	1232	# REM-MASCHINE AUSWERTEN
	1233	eval filename=${pathin[$i]}/${endin[$i]}
	1234	else
	1235	remotepathin[$i]=${pathin[$i]}/${afname}${endin[$i]} # REMOTE-PFAD ERST AUF
	1236	# REM-MASCHINE AUSWERTEN
	1237	eval filename=${pathin[$i]}/${afname}${endin[$i]}
	1238	fi
	1239
	1240	# PRUEFEN AUF VORHANDENSEIN
	1241	if [[ $(ls $filename* 2>&1 \| grep -c "not found") = 1 \|\| \
	1242	$(ls $filename* 2>&1 \| grep -c "No such file") = 1 \|\| \
	1243	$(ls $filename* 2>&1 \| grep -c "does not exist") = 1 ]]
	1244	then
	1245	# DATEIEN MIT EXTENSION (Z.B. NC) MUESSEN NICHT ZWINGEND VORHANDEN
	1246	# SEIN, DESHALB IN SOLCHEN FAELLEN KEIN ABBRUCH. DIES IST NUR EINE
	1247	# VORUEBERGEHENDE LOESUNG (OKT 05). NICHT ZWINGEND BENOETIGTE
	1248	# EINGABEDATEIEN SOLLTEN EINE SPEZIELLE OPTION IN DER DATEI-
	1249	# VERBINDUNGSANWEISUNG BEKOMMEN (Z.B. inopt?)
	1250	if [[ "${transin[$i]}" != "locopt" ]]
	1251	then
	1252	printf "\n\n +++ INPUT-file: "
	1253	if [[ "${extin[$i]}" = "" ]]
	1254	then
	1255	printf "\n $filename"
	1256	else
	1257	printf "\n $filename.${extin[$i]}"
	1258	fi
	1259	printf "\n does not exist\n"
	1260	locat=input; exit
	1261	else
	1262	transin[$i]="unavailable"
	1263	fi
	1264	else
	1265
	1266	# ZYKLUSNUMMER FESTSTELLEN
	1267	ls -1 -d $filename > filelist 2>/dev/null
	1268	ls -1 -d $filename.* >> filelist 2>/dev/null
	1269	while read zeile
	1270	do
	1271	cycle=$(print $zeile \| cut -f2 -d".")
	1272	if [[ "$cycle" = "$zeile" ]]
	1273	then
	1274	(( icycle = 0 ))
	1275	elif [[ "$cycle" = "${extin[$i]}" ]]
	1276	then
	1277	(( icycle = 0 ))
	1278	else
	1279	(( icycle = $cycle ))
	1280	fi
	1281	if (( icycle > maxcycle ))
	1282	then
	1283	(( maxcycle = icycle ))
	1284	file_to_be_used=$zeile
	1285	fi
	1286	done <filelist
	1287	rm filelist
	1288
	1289	# EVTL. ZYKLUSNUMMER AN DATEINAMEN ANFUEGEN
	1290	if (( maxcycle > 0 ))
	1291	then
	1292	if [[ "${extin[$i]}" != " " && "${extin[$i]}" != "" ]]
	1293	then
	1294	filename=${filename}.$maxcycle.${extin[$i]}
	1295	else
	1296	filename=${filename}.$maxcycle
	1297	fi
	1298	else
	1299	if [[ "${extin[$i]}" != " " && "${extin[$i]}" != "" ]]
	1300	then
	1301	filename=${filename}.${extin[$i]}
	1302	fi
	1303	fi
	1304
	1305	# DATEINAMEN OHNE PFAD ABER MIT ZYKLUSNUMMER ABSPEICHERN,
	1306	# DA SPAETER BEI RUECKSPEICHERN VOM ARCHIVSYSTEM EVTL. BENOETIGT
	1307	absnamein[$i]=$filename
	1308	if (( maxcycle > 0 ))
	1309	then
	1310	if [[ "${actionin[$i]}" = di ]]
	1311	then
	1312	frelin[$i]=${endin[$i]}.$maxcycle
	1313	else
	1314	frelin[$i]=${afname}${endin[$i]}.$maxcycle
	1315	fi
	1316	else
	1317	if [[ "${actionin[$i]}" = di ]]
	1318	then
	1319	frelin[$i]=${endin[$i]}
	1320	else
	1321	frelin[$i]=${afname}${endin[$i]}
	1322	fi
	1323	fi
	1324
	1325	fi
	1326	done
	1327
	1328
	1329	# VOLLSTAENDIGE DATEINAMEN (OHNE $ ODER ~) DER OUTPUT-FILES BILDEN,
	1330	# OUTPUT-DATEIEN AUF VORHANDENSEIN PRUEFEN UND EVTL. HOECHSTE ZYKLUSNUMMER
	1331	# ERMITTELN ODER, FALLS NICHT VORHANDEN, PRUEFEN, OB SIE SICH ANLEGEN LASSEN
	1332	# DIESE AKTIONEN FINDEN NICHT STATT, WENN PROGRAMM AUF REMOTE-MASCHINE
	1333	# RECHNET UND DATEI ANSCHLIESSEND TRANSFERIERT WERDEN SOLL!
	1334	(( i = 0 ))
	1335	while (( i < iout ))
	1336	do
	1337	(( i = i + 1 ))
	1338	if [[ ! ( $fromhost != $localhost && ( "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = tra \|\| "${actionout[$i]}" = trpe ) ) ]]
	1339	then
[260]	1340	if [[ "${actionout[$i]}" = tr ]]
[1]	1341	then
	1342	actionout[$i]=""
[260]	1343	elif [[ "${actionout[$i]}" = trpe ]]
	1344	then
	1345	actionout[$i]=pe
[1]	1346	elif [[ "${actionout[$i]}" = tra ]]
	1347	then
	1348	actionout[$i]=a
	1349	fi
	1350	(( maxcycle = 0 ))
	1351	eval filename=${pathout[$i]}/${fname}${endout[$i]}
	1352	eval catalogname=${pathout[$i]}
	1353	if [[ $(ls $filename* 2>&1 \| grep -c "not found") = 1 \|\| \
	1354	$(ls $filename* 2>&1 \| grep -c "No such file") = 1 \|\| \
	1355	$(ls $filename* 2>&1 \| grep -c "does not exist") = 1 ]]
	1356	then
	1357
	1358	# OUTPUT-DATEI NICHT VORHANDEN. PRUEFEN, OB ANLEGEN MOEGLICH.
	1359	if cat /dev/null > $filename
	1360	then
	1361	rm $filename
	1362	else
	1363
	1364	# PRUEFEN, OB KATALOG VORHANDEN UND EVTL. DIESEN ANLEGEN
	1365	if [[ ! -d $catalogname ]]
	1366	then
	1367	if mkdir -p $catalogname
	1368	then
	1369	printf "\n\n *** directory:"
	1370	printf "\n $catalogname"
	1371	printf "\n was created\n"
	1372	else
	1373	printf "\n\n +++ OUTPUT-file:"
	1374	printf "\n $filename"
	1375	printf "\n cannot be created, because directory does not exist"
	1376	printf "\n and cannot be created either"
	1377	printf "\n"
	1378	locat=output ; exit
	1379	fi 2>/dev/null
	1380	else
	1381	printf "\n\n +++ OUTPUT-file:"
	1382	printf "\n $filename"
	1383	printf "\n cannot be created, although directory exists"
	1384	printf "\n"
	1385	locat=output ; exit
	1386	fi
	1387	fi 2>/dev/null
	1388	else
	1389
	1390	# ZYKLUSNUMMER FESTSTELLEN
	1391	ls -1 -d $filename > filelist 2>/dev/null
	1392	ls -1 -d $filename.* >> filelist 2>/dev/null
	1393	while read zeile
	1394	do
	1395	cycle=$(print $zeile \| cut -f2 -d".")
	1396	if [[ "$cycle" = "$zeile" \|\| "$cycle" = ${extout[$i]} ]]
	1397	then
	1398	(( icycle = 1 ))
	1399	else
	1400	(( icycle = $cycle + 1 ))
	1401	fi
	1402	if (( icycle > maxcycle ))
	1403	then
	1404	(( maxcycle = icycle ))
	1405	fi
	1406	done <filelist
	1407	rm filelist
	1408	fi
	1409
	1410	# EVTL. ZYKLUSNUMMER AN DATEINAMEN ANFUEGEN UND PRUEFEN, OB SICH
	1411	# DATEI AUCH WIRKLICH ANLEGEN LAESST. IM APPEND-FALL MUSS AN DEN
	1412	# HOECHSTEN VORHANDENEN ZYKLUS-ANGEHAENGT WERDEN. ANLAGEPRUEFUNG
	1413	# IST DANN NATUERLICH NICHT ZULAESSIG BZW. MOEGLICH
	1414	if [[ "${actionout[$i]}" != a ]]
	1415	then
	1416	if (( maxcycle > 0 ))
	1417	then
	1418	filename=${filename}.$maxcycle
	1419	if cat /dev/null > $filename
	1420	then
	1421	rm $filename
	1422	else
	1423	printf "\n +++ OUTPUT-file:"
	1424	printf "\n $filename"
	1425	printf "\n cannot be created"
	1426	locat=output ; exit
	1427	fi
	1428	fi
	1429	else
	1430	(( maxcycle = maxcycle - 1 ))
	1431	if (( maxcycle > 0 ))
	1432	then
	1433	filename=${filename}.$maxcycle
	1434	fi
	1435	fi
	1436
	1437	# DATEINAMEN OHNE PFAD ABER MIT ZYKLUSNUMMER ABSPEICHERN,
	1438	# DA SPAETER BEI ABLAGE AUF ARCHIVSYSTEM BZW. FUER
	1439	# DATEI OUTPUT_FILE_CONNECTIONS EVTL. BENOETIGT
	1440	pathout[$i]=$filename
	1441	if (( maxcycle > 0 ))
	1442	then
	1443	frelout[$i]=${fname}${endout[$i]}.$maxcycle
	1444	else
	1445	frelout[$i]=${fname}${endout[$i]}
	1446	fi
	1447
	1448	fi
	1449	done
	1450
	1451
[260]	1452	# DAS DVR-PAKET ERFORDERT EINE ENTSPRECHENDE BIBLIOTHEK
[83]	1453	if [[ $(echo $package_list \| grep -c dvrp_graphics) != 0 ]]
	1454	then
[260]	1455	if [[ "$dvr_inc" = "" ]]
[83]	1456	then
[260]	1457	printf "\n\n +++ no value for \"dvr_inc\" given in configuration file"
[83]	1458	printf "\n This is required for the dvrp_graphics package.\n"
[260]	1459	locat=dvr; exit
[83]	1460	fi
[260]	1461	if [[ "$dvr_lib" = "" ]]
[83]	1462	then
[260]	1463	printf "\n\n +++ no value for \"dvr_lib\" given in configuration file"
[83]	1464	printf "\n This is required for the dvrp_graphics package.\n"
[260]	1465	locat=dvr; exit
[83]	1466	fi
	1467	fi
	1468
	1469
[1]	1470	# PRUEFEN, OB ENTWEDER HAUPTPROGRAMM ODER NUR EIN AUSFUEHRBARES
	1471	# PROGRAMM VEREINBART WURDE (IN DIESEM FALL BRAUCHT IM WEITEREN NICHT
	1472	# UEBERSETZT ZU WERDEN)
	1473	if [[ "$mainprog" = "" && "$executable" = "" ]]
	1474	then
	1475	printf "\n +++ neither main program nor executable defined"
	1476	locat=source; exit
	1477	elif [[ "$mainprog" != "" && "$executable" != "" ]]
	1478	then
	1479	printf "\n +++ main program as well as executable defined"
	1480	locat=source; exit
	1481	elif [[ "$mainprog" = "" && "$executable" != "" ]]
	1482	then
	1483	do_compile=false
	1484	fi
	1485
	1486
[191]	1487	# SOURCE-VERZEICHNIS ZUM AUFSAMMELN DER ZU UEBERSETZENDEN PROGRAMMTEILE
	1488	# ERZEUGEN. HIERHIN WERDEN SPAETER IM FALL VON BATCH-JOBS AUCH DAS MRUN-
	1489	# SCRIPTS SOWIE DIE KONFIGURATIONSDATEI KOPIERT
[193]	1490	if [[ $restart_run != true && "$SOURCES_COMPLETE" = "" ]]
[191]	1491	then
	1492	rm -rf SOURCES_FOR_RUN_$fname
	1493	mkdir SOURCES_FOR_RUN_$fname
	1494	fi
	1495
	1496
[1]	1497	# ALLE ZU UEBERSETZENDEN PROGRAMMTEILE ZUSAMMENSAMMELN
	1498	# BEI BATCH-JOBS IST DIES NICHT NOETIG, WEIL DIE PROGRAMMTEILE BEREITS DURCH
	1499	# DEN MRUN-AUFRUF ERMITTELT SIND, DER DEN BATCH-JOB GENERIERT HAT, UND
	1500	# IM VERZEICHNIS SOURCES_FOR_RUN_... ABGELEGT SIND
	1501	if [[ $do_compile = true && "$SOURCES_COMPLETE" = "" ]]
	1502	then
	1503
[5]	1504	[[ "$source_list" = LM ]] && source_list=LOCALLY_MODIFIED
	1505	[[ "$source_list" = WP ]] && source_list=WRITE_PERMIT
[1]	1506
	1507
	1508	# EVTL. ZU UEBERSETZENDE PROGRAMMTEILE DADURCH BESTIMMEN, DASS GEPRUEFT
	1509	# WIRD, WELCHE DATEIEN WRITE-PERMIT BESITZEN (DATEIEN SOLLTEN DESHALB
	1510	# UNTER RCS-KONTROLLE STEHEN). MIT DER VARIABLEN EXCLUDE KOENNEN
	1511	# BESTIMMTE DATEIEN GRUNDSAETZLICH VON DER UEBERSETZUNG AUSGESCHLOSSEN
	1512	# WERDEN. DIES IST NUR BEI MANUELLEM START VON MRUN DURCH DEN BENUTZER
	1513	# MOEGLICH, DA BEI AUTOMATISCHEN RESTARTS TEST DURCH DIE TATSAECHLICH
	1514	# ZU UBERSETZENDEN DATEIEN ERSETZT IST.
	1515	# ALLE ERMITTELTEN DATEIEN WERDEN IM VERZEICHNIS SOURCES_FOR_RUN_...
	1516	# GESAMMELT
[5]	1517	if [[ "$source_list" = WRITE_PERMIT ]]
[1]	1518	then
	1519
	1520	source_list=""
	1521	cd $source_path
	1522
	1523
	1524	# ALLE MOEGLICHEN QUELLCODEDATEIEN AUFLISTEN
	1525	Names=$(ls -1 *.f90 2>&1)
	1526	[[ $(echo $Names \| grep -c '*.f90') = 0 ]] && Filenames="$Names"
	1527	Names=$(ls -1 *.F90 2>&1)
	1528	[[ $(echo $Names \| grep -c '*.F90') = 0 ]] && Filenames="$Filenames $Names"
	1529	Names=$(ls -1 *.F 2>&1)
	1530	[[ $(echo $Names \| grep -c '*.F') = 0 ]] && Filenames="$Filenames $Names"
	1531	Names=$(ls -1 *.f 2>&1)
	1532	[[ $(echo $Names \| grep -c '*.f') = 0 ]] && Filenames="$Filenames $Names"
	1533	Names=$(ls -1 *.c 2>&1)
	1534	[[ $(echo $Names \| grep -c '*.c') = 0 ]] && Filenames="$Filenames $Names"
	1535
	1536
	1537	# DATEIEN MIT WRITE-PERMIT NACH SOURCES_FOR_RUN_... KOPIEREN
	1538	for dateiname in $Filenames
	1539	do
	1540	if [[ -w $dateiname ]]
	1541	then
	1542	if [[ "$exclude" = "" \|\| $(echo $exclude \| grep -c $dateiname) = 0 ]]
	1543	then
	1544	cp $dateiname $working_directory/SOURCES_FOR_RUN_$fname
	1545	source_list=$source_list"$dateiname "
	1546	fi
	1547	fi
	1548	done
	1549
	1550	cd - > /dev/null
	1551
	1552
[5]	1553	elif [[ "$source_list" = LOCALLY_MODIFIED ]]
	1554	then
	1555
	1556	# MODIFIZIERTE DATEIEN DER SVN-ARBEITSKOPIE BESTIMMEN
	1557	source_list=""
	1558	cd $source_path
	1559
	1560
	1561	# PRUEFEN, OB VERZEICHNIS UEBERHAUPT UNTER SVN-KONTROLLE STEHT
	1562	if [[ ! -d .svn ]]
	1563	then
	1564	printf "\n\n +++ source directory"
	1565	printf "\n \"$source_path\" "
	1566	printf "\n is not under control of \"subversion\"."
	1567	printf "\n Please do not use mrun-option \"-s LOCALLY MODIFIED\"\n"
	1568	fi
	1569
	1570
	1571	# ALLE MODIFIZIERTEN QUELLCODEDATEIEN AUFLISTEN
	1572	Filenames=""
[69]	1573	svn status > tmp_mrun
	1574	while read line
[5]	1575	do
	1576	firstc=`echo $line \| cut -c1`
	1577	if [[ $firstc = M \|\| $firstc = "?" ]]
	1578	then
	1579	Name=`echo "$line" \| cut -c8-`
	1580	extension=`echo $Name \| cut -d. -f2`
	1581	if [[ "$extension" = f90 \|\| "$extension" = F90 \|\| "$extension" = f \|\| "$extension" = F \|\| "$extension" = c ]]
	1582	then
	1583	Filenames="$Filenames "$Name
	1584	fi
	1585	fi
[69]	1586	done < tmp_mrun
[5]	1587
	1588
	1589	# DATEIEN NACH SOURCES_FOR_RUN_... KOPIEREN
	1590	for dateiname in $Filenames
	1591	do
	1592	cp $dateiname $working_directory/SOURCES_FOR_RUN_$fname
	1593	source_list=$source_list"$dateiname "
	1594	done
	1595
	1596	cd - > /dev/null
	1597
	1598
[1]	1599	# MITTELS OPTION -s ANGEGEBENE DATEIEN NACH SOURCES_FOR_RUN_... KOPIEREN
	1600	# BEI AUTOMATISCHEN FORTSETZUNGSLAEUFEN SIND DORT SCHON ALLE DATEIEN
	1601	# VORHANDEN
[5]	1602	elif [[ "$source_list" != "" && $restart_run != true ]]
[1]	1603	then
	1604
	1605	cd $source_path
	1606
	1607	for filename in $source_list
	1608	do
	1609
	1610	# QUELLTEXT-DATEI DARF KEINE PFADE BEINHALTEN
	1611	if [[ $(print $filename \| grep -c "/") != 0 ]]
	1612	then
	1613	printf "\n +++ source code file: $filename"
	1614	printf "\n must not contain (\"/\") "
	1615	locat=source; exit
	1616	fi
	1617
	1618	if [[ ! -f $filename ]]
	1619	then
	1620	printf "\n +++ source code file: $filename"
	1621	printf "\n does not exist"
	1622	locat=source; exit
	1623	else
	1624	cp $filename $working_directory/SOURCES_FOR_RUN_$fname
	1625	fi
	1626
	1627	done
	1628
	1629	cd - > /dev/null
	1630
	1631	fi
	1632
	1633
	1634	# PRUEFEN, OB ENTWEDER HAUPTPROGRAMM VORHANDEN UND ES EVTL. IN DER
	1635	# LISTE DER ZU UEBERSETZENDEN PROGRAMMTEILE MIT ENTHALTEN IST (WENN
	1636	# NICHT, WIRD ES DIESER LISTE HINZUGEFUEGT)
[5]	1637	if [[ $restart_run != true ]]
[1]	1638	then
	1639
	1640	if [[ ! -f "$source_path/$mainprog" ]]
	1641	then
	1642	printf "\n\n +++ main program: $mainprog"
	1643	printf "\n does not exist in source directory"
	1644	printf "\n \"$source_path\"\n"
	1645	locat=source; exit
	1646	else
	1647	if [[ $(echo $source_list \| grep -c $mainprog) = 0 ]]
	1648	then
	1649	cp $source_path/$mainprog SOURCES_FOR_RUN_$fname
	1650	source_list=${mainprog}" $source_list"
	1651	fi
	1652	fi
	1653	fi
	1654
	1655
[211]	1656	# MAKEFILE AUF VORHANDENSEIN PRUEFEN UND KOPIEREN
	1657	# BEI RESTART-LAEUFEN LIEGT ES SCHON IM VERZEICHNIS SOURCES_FOR_RUN...
	1658	if [[ "$restart_run" != true ]]
	1659	then
	1660	[[ "$makefile" = "" ]] && makefile=$source_path/Makefile
	1661	if [[ ! -f $makefile ]]
	1662	then
	1663	printf "\n +++ file \"$makefile\" does not exist"
	1664	locat=make; exit
	1665	else
	1666	cp $makefile SOURCES_FOR_RUN_$fname/Makefile
	1667	fi
	1668	fi
	1669
	1670
[1]	1671	# DATEIEN AUS ZUSAETZLICHEM QUELLVERZEICHNIS HINZUFUEGEN
[5]	1672	if [[ $restart_run != true && "$add_source_path" != "" ]]
[1]	1673	then
	1674
	1675	# GIBT ES DAS VERZEICHNIS UEBERHAUPT?
	1676	if [[ ! -d $add_source_path ]]
	1677	then
	1678	printf "\n\n +++ WARNING: additional source code directory"
	1679	printf "\n \"$add_source_path\" "
	1680	printf "\n does not exist or is not a directory."
	1681	printf "\n No source code will be used from this directory!\n"
	1682	add_source_path=""
	1683	sleep 3
	1684	else
	1685
	1686	cd $add_source_path
[211]	1687	found=false
[1]	1688
	1689	Names=$(ls -1 *.f90 2>&1)
	1690	[[ $(echo $Names \| grep -c '*.f90') = 0 ]] && AddFilenames="$Names"
	1691	Names=$(ls -1 *.F90 2>&1)
	1692	[[ $(echo $Names \| grep -c '*.F90') = 0 ]] && AddFilenames="$AddFilenames $Names"
	1693	Names=$(ls -1 *.F 2>&1)
	1694	[[ $(echo $Names \| grep -c '*.F') = 0 ]] && AddFilenames="$AddFilenames $Names"
	1695	Names=$(ls -1 *.f 2>&1)
	1696	[[ $(echo $Names \| grep -c '*.f') = 0 ]] && AddFilenames="$AddFilenames $Names"
	1697	Names=$(ls -1 *.c 2>&1)
	1698	[[ $(echo $Names \| grep -c '*.c') = 0 ]] && AddFilenames="$AddFilenames $Names"
	1699
	1700	cd - > /dev/null
	1701	cd SOURCES_FOR_RUN_$fname
	1702
[211]	1703	# COPY MAKEFILE IF EXISTING
	1704	if [[ -f $add_source_path/Makefile ]]
	1705	then
	1706	printf "\n\n *** user Makefile from directory"
	1707	printf "\n \"$add_source_path\" is used \n"
	1708	sleep 1
	1709	cp $add_source_path/Makefile .
	1710	fi
	1711
[1]	1712	for dateiname in $AddFilenames
	1713	do
	1714	if [[ -f $dateiname ]]
	1715	then
	1716	printf "\n +++ source code file \"$dateiname\" found in additional"
	1717	printf "\n source code directory \"$add_source_path\" "
[211]	1718	printf "\n but was also given with option \"-s\" which means that it should be taken"
	1719	printf "\n from directory \"$source_path\"."
[1]	1720	locat=source; exit
	1721	fi
	1722
	1723	cp $add_source_path/$dateiname .
	1724	source_list="$source_list $dateiname"
	1725
[211]	1726	# CHECK IF FILE IS CONTAINED IN MAKEFILE
	1727	if [[ $(grep -c $dateiname Makefile) = 0 ]]
	1728	then
	1729	printf "\n\n +++ user file \"$dateiname\" "
	1730	printf "\n is not listed in Makefile \n"
	1731	locat=source; exit
	1732	else
	1733
[1]	1734	# Default User-Interface von der Liste entfernen, falls Datei
	1735	# ein User-Interface enthaelt
[211]	1736	# if [[ $( cat $dateiname \| grep -c "END SUBROUTINE user_parin" ) != 0 ]]
	1737	# then
	1738	# if [[ $dateiname != user_interface.f90 && -f user_interface.f90 ]]
	1739	# then
	1740	# rm -rf user_interface.f90
	1741	# source_list=`echo $source_list \| sed -e 's/user_interface.f90//'`
	1742	# printf "\n\n *** default \"user_interface.f90\" removed from the files to be translated"
	1743	# printf "\n since a user-interface is found in file"
	1744	# printf "\n \"$add_source_path/$dateiname\" \n"
	1745	# sleep 3
	1746	# else
	1747	if [[ $found = false ]]
[1]	1748	then
[211]	1749	found=true
	1750	printf "\n\n *** following user file(s) added to the"
	1751	printf " files to be translated:\n "
[1]	1752	fi
[211]	1753	printf "$dateiname "
	1754	sleep 0.5
[1]	1755	fi
	1756	done
[211]	1757	[[ $found = true ]] && printf "\n"
[1]	1758	cd - > /dev/null
	1759	fi
	1760	fi
	1761
	1762
	1763	# ALLE UNTERPROGRAMME, DIE ZU VEREINBARTEN SOFTWAREPAKETEN GEHOEREN,
	1764	# DER LISTE DER ZU UEBERSETZENDEN DATEIEN HINZUFUEGEN
[5]	1765	if [[ $restart_run != true && -n $package_list ]]
[1]	1766	then
	1767
	1768	cd $source_path
	1769
	1770	for package in $package_list
	1771	do
	1772
	1773	[[ $package = "dvrp_graphics+1PE" ]] && package=dvrp_graphics
	1774
	1775	# ERMITTELE ALLE DATEIEN, DIE ZUM PAKET GEHOEREN
	1776	# FEHLERMELDUNGEN WERDEN ABGEFANGEN, DA * AUCH VERZEICHNISSNAMEN
	1777	# LIEFERT
	1778	package_source_list=`grep "defined( __$package " * 2>/dev/null \| cut -f1 -d:`
	1779
	1780
	1781	# FUEGE DIESE DATEIEN DER LISTE DER ZU UEBERSETZENDEN DATEIEN
	1782	# HINZU, FALLS SIE NOCH NICHT DAZUGEHOEREN
	1783	for source_list_name in $package_source_list
	1784	do
	1785	if [[ $(echo $source_list \| grep -c $source_list_name) = 0 ]]
	1786	then
	1787
	1788	# NUR DATEIEN MIT GUELTIGEN ENDUNGEN VERWENDEN
	1789	ending=`echo $source_list_name \| cut -f2 -d.`
	1790	if [[ "$ending" = f90 \|\| "$ending" = F90 \|\| "$ending" = f \|\| "$ending" = F \|\| "$ending" = c ]]
	1791	then
	1792	cp $source_list_name $working_directory/SOURCES_FOR_RUN_$fname
	1793	source_list="$source_list $source_list_name"
	1794	fi
	1795	fi
	1796	done
	1797	done
	1798
	1799	cd - > /dev/null
	1800	fi
	1801
	1802
	1803	# MAKEFILE AUF VORHANDENSEIN PRUEFEN UND KOPIEREN
	1804	# BEI RESTART-LAEUFEN LIEGT ES SCHON IM VERZEICHNIS SOURCES_FOR_RUN...
[211]	1805	# if [[ "$restart_run" != true ]]
	1806	# then
	1807	# [[ "$makefile" = "" ]] && makefile=$source_path/Makefile
	1808	# if [[ ! -f $makefile ]]
	1809	# then
	1810	# printf "\n +++ file \"$makefile\" does not exist"
	1811	# locat=make; exit
	1812	# else
	1813	# cp $makefile SOURCES_FOR_RUN_$fname/Makefile
	1814	# fi
	1815	# fi
[1]	1816
	1817	fi # do_compile=true
	1818
	1819
	1820	# FALLS PROGRAMMTEILE UEBERSETZT WERDEN SOLLEN, FOLGEN JETZT EINIGE
	1821	# UEBERPRUEFUNGEN UND DAS SETZEN DER PRAEPROZESSOR-DIREKTIVEN
	1822	if [[ $do_compile = true ]]
	1823	then
	1824
	1825	# PRAEPROZESSOR-DIREKTIVEN ZUM SELEKTIVEN AUSWAEHLEN VON CODETEILEN
	1826	# ZUSAMMENSETZEN
[83]	1827	# DIREKTIVEN ZUM AKTIVIEREN VON RECHNERSPEZIFISCHEM CODE
[1]	1828	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
	1829	then
[82]	1830	cpp_options="${cpp_options},-D__ibm=__ibm"
[1]	1831	elif [[ $(echo $localhost \| cut -c1-3) = nec ]]
	1832	then
[82]	1833	cpp_options="$cpp_options -D__nec"
	1834	elif [[ $(echo $localhost \| cut -c1-2) = lc ]]
	1835	then
	1836	cpp_options="$cpp_options -D__lc"
[1]	1837	else
[82]	1838	cpp_options="$cpp_options -D__$localhost"
[1]	1839	fi
[83]	1840
	1841	# DIREKTIVEN DIE DURCH OPTION -K BESTIMMT WERDEN (Z.B. PARALLEL)
[1]	1842	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
	1843	then
[82]	1844	[[ -n $cond1 ]] && cpp_options="${cpp_options},-D__$cond1=__$cond1"
	1845	[[ -n $cond2 ]] && cpp_options="${cpp_options},-D__$cond2=__$cond2"
[1]	1846	else
[82]	1847	[[ -n $cond1 ]] && cpp_options="$cpp_options -D__$cond1"
	1848	[[ -n $cond2 ]] && cpp_options="$cpp_options -D__$cond2"
[1]	1849	fi
[83]	1850
	1851	# DIREKTIVEN DIE SOFTWAREPAKETE AKTIVIEREN (OPTION -p)
[1]	1852	if [[ -n $package_list ]]
	1853	then
	1854	for package in $package_list
	1855	do
	1856	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
	1857	then
	1858	if [[ $package != "dvrp_graphics+1PE" ]]
	1859	then
[82]	1860	cpp_options="${cpp_options},-D__$package=__$package"
[1]	1861	else
[82]	1862	cpp_options="${cpp_options},-D__dvrp_graphics=__dvrp_graphics"
[1]	1863	export use_seperate_pe_for_dvrp_output=true
	1864	fi
	1865	else
	1866	if [[ $package != "dvrp_graphics+1PE" ]]
	1867	then
[82]	1868	cpp_options="$cpp_options -D__$package"
[1]	1869	else
[82]	1870	cpp_options="$cpp_options -D__dvrp_graphics"
[1]	1871	export use_seperate_pe_for_dvrp_output=true
	1872	fi
	1873	fi
	1874	done
	1875	fi
[83]	1876
	1877	# DIREKTIVEN DIE DURCH OPTION -D FESTGELEGT SIND
[1]	1878	if [[ -n $cpp_opts ]]
	1879	then
	1880	for popts in $cpp_opts
	1881	do
[82]	1882	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
	1883	then
	1884	cpp_options="${cpp_options},-D__$popts=__$popts"
	1885	else
	1886	cpp_options="$cpp_options -D__$popts"
	1887	fi
[1]	1888	done
	1889	fi
	1890
	1891	else
	1892
	1893
	1894	# BEI LOKALEN RECHNUNGEN PRUEFEN, OB EXECUTABLE VORHANDEN
	1895	if [[ $do_remote = false ]]
	1896	then
	1897	if [[ ! -f $executable ]]
	1898	then
	1899	printf "\n +++ executable file: $executable"
	1900	printf "\n does not exist"
	1901	locat=executable; exit
	1902	fi
	1903	fi
	1904	fi
	1905
	1906
	1907	# JOBMODUS FESTSTELLEN
	1908	if [[ "$ENVIRONMENT" = BATCH && $localhost != lctit \|\| "$QUEUE" != interactive && $localhost = lctit ]]
	1909	then
	1910	jobmo=BATCH
	1911	else
	1912	jobmo=INTERACTIVE
	1913	fi
	1914
	1915
	1916	# HOSTSPEZIFISCHE DEFAULT-COMPILER SETZEN, FALLS NICHT BEREITS
	1917	# DURCH BENUTZER ANDERWEITIG VEREINBART
	1918	if [[ "$compiler_name" = "" ]]
	1919	then
[82]	1920
[220]	1921	printf "\n +++ no compiler specified for \"$host $cond1 $cond2\""
[82]	1922	locat=compiler_name; exit
	1923
[1]	1924	fi
	1925
	1926
[251]	1927	# COMPILER AUF RIAMS NEC UEBERSCHREIBEN
	1928	[[ $localhost = necriam ]] && compiler_name=mpif90
[1]	1929
	1930
	1931
	1932	# TEMPORAEREN KATALOGNAMEN BESTIMMEN
	1933	kennung=$RANDOM
	1934	if [[ "$tmp_user_catalog" = "" ]]
	1935	then
	1936	if [[ $localhost = ibmb \|\| $localhost = ibmh ]]
	1937	then
	1938	tmp_user_catalog=$TMPDIR
	1939	elif [[ $localhost = nech ]]
	1940	then
	1941	tmp_user_catalog=$WRKSHR
	1942	else
	1943	tmp_user_catalog=/tmp
	1944	fi
	1945	fi
	1946	TEMPDIR=$tmp_user_catalog/${usern}.$kennung
	1947
	1948
	1949	# KATALOGNAMEN FUER ZWISCHENSPEICHERUNG VON FORTSETZUNGSLAUFDATEIEN
	1950	# BESTIMMEN
	1951	if [[ "$tmp_data_catalog" = "" ]]
	1952	then
	1953	if [[ $localhost = ibmb \|\| $localhost = ibmh ]]
	1954	then
	1955	tmp_data_catalog=$WORK/mrun_restart_data
	1956	elif [[ $localhost = nech ]]
	1957	then
	1958	tmp_data_catalog=$WRKSHR/mrun_restart_data
	1959	else
	1960	tmp_data_catalog=/tmp/mrun_restart_data
	1961	fi
	1962	fi
	1963
	1964
	1965	# EVENTUELL BEI LOKALEN RECHNUNGEN $-ZEICHEN IN ENVIRONMENT-VARIABLEN
	1966	# ERSETZEN
	1967	if [[ $do_remote = false && $do_compile = true ]]
	1968	then
	1969	eval fopts=\"$fopts\"
	1970	eval lopts=\"$lopts\"
	1971	fi
	1972
	1973
	1974
	1975	# COMPILE- UND LINK-OPTIONEN BESTIMMEN
[260]	1976	fopts="$fopts $netcdf_inc $dvr_inc"
	1977	lopts="$lopts $netcdf_lib $dvr_lib"
[1]	1978	ROPTS="$ropts"
[179]	1979	if [[ ( $(echo $host \| cut -c1-3) = nec \|\| $(echo $host \| cut -c1-3) = ibm \|\| $host = lcsgih \|\| $host = lcsgib \|\| $host = lctit \|\| $host = lcfimm \|\| $host = lcxt4 ) && -n $numprocs ]]
[1]	1980	then
	1981	XOPT="-X $numprocs"
	1982	fi
	1983
	1984
	1985
	1986	# PRUEFEN DER CPU-ZEIT. (CPUMAX WIRD ALS ENV-VARIABLE VOM HAUTPRO-
	1987	# GRAMM BENOETIGT
	1988	done=false
	1989	while [[ $done = false ]]
	1990	do
	1991	cputime=$cpumax
	1992	if (( $cputime == 0 ))
	1993	then
[246]	1994	if [[ $do_batch = true ]]
	1995	then
	1996	printf "\n +++ cpu-time is undefined"
	1997	printf "\n >>> Please type CPU-time in seconds as INTEGER:"
	1998	printf "\n >>> "
	1999	read cputime 1>/dev/null 2>&1
	2000	else
	2001	cputime=10000000 # NO CPU LIMIT FOR INTERACTIVE RUNS
	2002	fi
[1]	2003	else
	2004	done=true
	2005	fi
	2006	cpumax=$cputime
	2007	done
	2008
	2009	(( minuten = cputime / 60 ))
	2010	(( sekunden = cputime - minuten * 60 ))
	2011
	2012
	2013	# PRUEFEN DER KERNSPEICHERANFORDERUNG
	2014	if [[ $do_batch = true ]]
	2015	then
	2016	done=false
	2017	while [[ $done = false ]]
	2018	do
	2019	if (( memory == 0 ))
	2020	then
	2021	printf "\n +++ memory demand is undefined"
	2022	printf "\n >>> Please type memory in MByte per process as INTEGER:"
	2023	printf "\n >>> "
	2024	read memory 1>/dev/null 2>&1
	2025	else
	2026	done=true
	2027	fi
	2028	done
	2029	fi
	2030
	2031
	2032	# PRUEFEN, OB FUER REMOTE-RECHNUNGEN EIN BENUTZERNAME ANGEGEBEN WURDE
	2033	if [[ $do_remote = true && -z $remote_username ]]
	2034	then
	2035	while [[ -z $remote_username ]]
	2036	do
	2037	printf "\n +++ username on remote host \"$host\" is undefined"
	2038	printf "\n >>> Please type username:"
	2039	printf "\n >>> "
	2040	read remote_username
	2041	done
	2042	mc="$mc -u$remote_username"
	2043	fi
	2044
[221]	2045
	2046	# SET DEFAULT VALUE FOR MPI MODULE TO BE USED ON SGI-ALTIX
	2047	if [[ $host = lcsgib \|\| $host = lcsgih ]]
	2048	then
	2049	[[ "$mpilib" = "" ]] && export mpilib=mpt
	2050	fi
	2051
	2052
	2053
[1]	2054	###########################################################################
	2055	# HEADER-AUSGABE
	2056	###########################################################################
	2057
	2058
	2059	calltime=$(date)
	2060	printf "\n"
	2061	# [[ $silent = false ]] && clear
	2062	printf "#--------------------------------------------------------------# \n"
	2063	printf "\| $version$calltime \| \n"
	2064	printf "\| \| \n"
	2065	spalte1="called on:"; spalte2=$localhost_realname
	2066	printf "\| $spalte1$spalte2 \| \n"
	2067	if [[ $local_compile = false ]]
	2068	then
	2069	if [[ $do_remote = true ]]
	2070	then
	2071	spalte1="execution on:"; spalte2="$host (username: $remote_username)"
	2072	else
	2073	spalte1="execution on:"; spalte2="$host ($localhost_realname)"
	2074	fi
	2075	else
	2076	spalte1="compiling test only!"; spalte2=""
	2077	fi
	2078	printf "\| $spalte1$spalte2 \| \n"
	2079	if [[ -n $numprocs ]]
	2080	then
	2081	spalte1="number of PEs:"; spalte2=$numprocs
	2082	printf "\| $spalte1$spalte2 \| \n"
	2083	fi
	2084	if [[ -n $tasks_per_node ]]
	2085	then
	2086	spalte1="tasks per node:"; spalte2="$tasks_per_node (number of nodes: $nodes)"
	2087	printf "\| $spalte1$spalte2 \| \n"
	2088	fi
	2089	if [[ $threads_per_task != 1 ]]
	2090	then
	2091	spalte1="threads per task:"; spalte2="$threads_per_task"
	2092	printf "\| $spalte1$spalte2 \| \n"
	2093	fi
	2094	printf "\| \| \n"
	2095	if [[ $do_compile = true ]]
	2096	then
[82]	2097	spalte1=cpp-directives:; spalte2=$cpp_options
[1]	2098	printf "\| $spalte1$spalte2 \| \n"
[82]	2099	zeile=$(echo "$cpp_options" \| cut -c41-)
[1]	2100	while [[ "$zeile" != "" ]]
	2101	do
	2102	spalte1=""
	2103	spalte2=$zeile
	2104	printf "\| $spalte1$spalte2 \| \n"
	2105	zeile=$(echo "$zeile" \| cut -c41-)
	2106	done
	2107
[82]	2108	spalte1=compiler-options:; spalte2="$fopts"
[1]	2109	printf "\| $spalte1$spalte2 \| \n"
[82]	2110	zeile=$(echo "$fopts" \| cut -c41-)
[1]	2111	while [[ "$zeile" != "" ]]
	2112	do
	2113	spalte1=""
	2114	spalte2=$zeile
	2115	printf "\| $spalte1$spalte2 \| \n"
	2116	zeile=$(echo "$zeile" \| cut -c41-)
	2117	done
	2118
[82]	2119	spalte1=linker-options:; spalte2=$lopts
[1]	2120	printf "\| $spalte1$spalte2 \| \n"
[82]	2121	zeile=$(echo "$lopts" \| cut -c41-)
[1]	2122	while [[ "$zeile" != "" ]]
	2123	do
	2124	spalte1=""
	2125	spalte2=$zeile
	2126	printf "\| $spalte1$spalte2 \| \n"
	2127	zeile=$(echo "$zeile" \| cut -c41-)
	2128	done
	2129
	2130	spalte1="main program":; spalte2=$mainprog
	2131	printf "\| $spalte1$spalte2 \| \n"
	2132	else
	2133	spalte1=executable:; spalte2=$executable
	2134	printf "\| $spalte1$spalte2 \| \n"
	2135	fi
	2136	printf "\| \| \n"
	2137	spalte1="base name of files":; spalte2=$fname
	2138	printf "\| $spalte1$spalte2 \| \n"
	2139	if [[ $fname != $afname ]]
	2140	then
	2141	spalte1="base name of input files":; spalte2=$afname
	2142	printf "\| $spalte1$spalte2 \| \n"
	2143	fi
	2144	spalte1="INPUT control list":; spalte2=$input_list
	2145	printf "\| $spalte1$spalte2 \| \n"
	2146	spalte1="OUTPUT control list":; spalte2=$output_list
	2147	printf "\| $spalte1$spalte2 \| \n"
	2148
	2149	if [[ $do_batch = true \|\| "$LOADLBATCH" = yes ]]
	2150	then
	2151	spalte1="memory demand / PE":; spalte2="$memory MB"
	2152	printf "\| $spalte1$spalte2 \| \n"
	2153	spalte1=CPU-time:; spalte2="$minuten:$sekunden"
	2154	printf "\| $spalte1$spalte2 \| \n"
	2155	fi
	2156
	2157	if [[ $do_compile = true ]]
	2158	then
	2159	printf "\| \| \n"
	2160	printf "\| Files to be compiled: \| \n"
	2161	zeile=$source_list
	2162	while [[ "$zeile" != "" ]]
	2163	do
	2164	spalte3=$zeile
	2165	printf "\| $spalte3 \| \n"
	2166	zeile=$(echo "$zeile" \| cut -c61-)
	2167	done
	2168	fi
	2169	printf "#--------------------------------------------------------------#"
	2170
	2171
	2172
	2173	# BEDINGTE AUSGABE DER DATEIVERBINDUNGEN
	2174	if [[ $do_trace = true ]]
	2175	then
	2176	(( i = 0 ))
	2177	while (( i < iin ))
	2178	do
	2179	(( i = i + 1 ))
	2180	if (( i == 1 ))
	2181	then
	2182	printf "\n\n >>> INPUT-file assignments:\n"
	2183	fi
	2184	printf "\n ${localin[$i]} : ${absnamein[$i]}"
	2185	done
	2186	(( i = 0 ))
	2187	while (( i < iout ))
	2188	do
	2189	(( i = i + 1 ))
	2190	if (( i == 1 ))
	2191	then
	2192	printf "\n\n >>> OUTPUT-file assignments:\n"
	2193	fi
	2194	printf "\n ${localout[$i]} : ${pathout[$i]}"
	2195	done
	2196	(( i = 0 ))
	2197	while (( i < iic ))
	2198	do
	2199	(( i = i + 1 ))
	2200	if (( i == 1 ))
	2201	then
	2202	printf "\n\n >>> INPUT-commands:\n"
	2203	fi
	2204	printf "\n ${in_command[$i]}"
	2205	done
	2206	(( i = 0 ))
	2207	while (( i < ioc ))
	2208	do
	2209	(( i = i + 1 ))
	2210	if (( i == 1 ))
	2211	then
	2212	printf "\n\n >>> OUTPUT-commands:\n"
	2213	fi
	2214	printf "\n ${out_command[$i]}"
	2215	done
	2216	fi
	2217
	2218
	2219	# ABFRAGEN BEI AUFRUF AUF LOKALER MASCHINE
	2220	if [[ $remotecall = false && $silent = false && $jobmo != BATCH ]]
	2221	then
	2222	antwort=dummy
	2223	printf "\n\n"
	2224	while [[ "$antwort" != y && "$antwort" != Y && "$antwort" != n && "$antwort" != N ]]
	2225	do
	2226	printf " >>> everything o.k. (y/n) ? "
	2227	read antwort
	2228	done
	2229	if [[ $antwort = n \|\| $antwort = N ]]
	2230	then
	2231	locat=user_abort; (( iec = 0 )); exit
	2232	fi
	2233	if [[ $do_batch = true ]]
	2234	then
	2235	printf " >>> batch-job will be created and submitted"
	2236	else
	2237	if [[ $local_compile = false ]]
	2238	then
	2239	printf " >>> MRUN will now continue to execute on this machine"
	2240	else
	2241	printf " >>> a test compilation will now be carried out on this machine"
	2242	fi
	2243	fi
	2244	fi
	2245
	2246
	2247
	2248
	2249	# FALLS AUF DIESER MASCHINE GERECHNET WERDEN SOLL, WERDEN JETZT ENTSPRE-
	2250	# CHENDE AKTIONEN DURCHGEFUEHRT
	2251	if [[ $do_batch = false ]]
	2252	then
	2253
	2254
	2255	# TEMPORAEREN KATALOG ERZEUGEN
	2256	mkdir -p $TEMPDIR
	2257	chmod go+rx $TEMPDIR
	2258	tmpcreate=true
	2259
	2260
	2261	# SAEMTLICHE QUELLTEXT-DATEIEN BZW. AUSFUEHRBARES PROGRAMM IN
	2262	# TEMPORAERES VERZEICHNIS KOPIEREN
	2263	if [[ $do_compile = true ]]
	2264	then
	2265
	2266	# ON NEC, COMPILATION IS DONE ON HOST CROSS VIA CROSS COMPILING
	2267	# CREATE A TEMPORARY DIRECTORY ON THAT MACHINE (HOME MOUNTED VIA NFS)
	2268	if [[ $localhost = nech ]]
	2269	then
	2270	TEMPDIR_COMPILE=$HOME/work/${usern}.$kennung
	2271	if mkdir -p $TEMPDIR_COMPILE
	2272	then
	2273	printf "\n *** \"$TEMPDIR_COMPILE\" "
	2274	printf "\n is generated as temporary directory for cross compiling\n"
	2275	else
	2276	printf "\n +++ creating directory \"$TEMPDIR_COMPILE\" "
	2277	printf "\n needed for cross compilation failed"
	2278	locat=compile
	2279	exit
	2280	fi
	2281	else
	2282	TEMPDIR_COMPILE=$TEMPDIR
	2283	fi
	2284
	2285
[82]	2286	# PFADNAMEN FUER DAS MAKE-DEPOSITORY ERMITTELN
	2287	line=""
	2288	grep "%depository_path" $config_file > tmp_mrun
	2289	while read line
	2290	do
	2291	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
	2292	then
	2293	if [[ "$(echo $line \| cut -d" " -s -f3)" = "" ]]
[1]	2294	then
[82]	2295	global_depository_path=`echo $line \| cut -d" " -s -f2`
[1]	2296	fi
[82]	2297	fi
	2298	done < tmp_mrun
[1]	2299
[82]	2300	line=""
	2301	grep " $localhost" $config_file \| grep "%depository_path" > tmp_mrun
	2302	while read line
	2303	do
	2304	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
[1]	2305	then
[211]	2306	if [[ "$(echo $line \| cut -d" " -s -f4)" = "$cond1" && "$(echo $line \| cut -d" " -s -f5)" = "$cond2" ]]
	2307	then
	2308	local_depository_path=`echo $line \| cut -d" " -s -f2`
	2309	fi
[1]	2310	fi
[82]	2311	done < tmp_mrun
[1]	2312
[82]	2313	if [[ "$local_depository_path" = "" ]]
	2314	then
	2315	if [[ "$global_depository_path" != "" ]]
[1]	2316	then
[82]	2317	local_depository_path=$global_depository_path
[1]	2318	else
[82]	2319	printf "\n\n +++ no depository path found in configuration file"
	2320	printf "\n for local host \"$localhost\" "
	2321	printf "\n please set \"\%depository_path\" in configuration file\n"
	2322	locat=config_file; exit
[1]	2323	fi
[82]	2324	fi
	2325	eval local_depository_path=$local_depository_path
[215]	2326	[[ "$cond1" != "" ]] && local_depository_path=${local_depository_path}_$cond1
	2327	[[ "$cond2" != "" ]] && local_depository_path=${local_depository_path}_$cond2
[1]	2328
[215]	2329
[82]	2330	basename=`print $mainprog \| cut -f1 -d"."`
	2331	eval make_depository=${local_depository_path}/${basename}_current_version.tar
	2332	if [[ ! -f $make_depository ]]
	2333	then
	2334	printf "\n"
	2335	printf "\n *** WARNING: make depository \"$make_depository\" not found"
	2336	printf "\n \"make\" will fail, if the Makefile or other source files are missing\n"
	2337	else
	2338	cp $make_depository $TEMPDIR_COMPILE
[1]	2339	cd $TEMPDIR_COMPILE
[82]	2340	tar -xf $make_depository > /dev/null 2>&1
[1]	2341	cd - > /dev/null
	2342	fi
[82]	2343
	2344	cp SOURCES_FOR_RUN_$fname/* $TEMPDIR_COMPILE
	2345
	2346	# FALLS USER-INTERFACE VORHANDEN UND AUF DATEI MIT ANDEREM NAMEN
	2347	# ALS user_interface.f90 LIEGT, DIESEN GEAENDERTEN NAMEN INS
	2348	# MAKEFILE EINTRAGEN
[211]	2349	# cd $TEMPDIR_COMPILE
	2350	# interface_file=`grep -l "END SUBROUTINE user_parin" $source_list`
	2351	# if [[ "$interface_file" != "" ]]
	2352	# then
	2353	# interface_file=`echo $interface_file \| cut -d"." -f1`
	2354	# mv Makefile Makefile_old
	2355	# sed "s/user_interface/$interface_file/g" Makefile_old > Makefile
	2356	# fi
	2357	# cd - > /dev/null
[1]	2358	else
	2359	cp $executable ${TEMPDIR}/a.out
	2360	fi
	2361
	2362
	2363	# WECHSEL IN TEMPORAEREN KATALOG
	2364	cd $TEMPDIR
	2365	printf "\n *** changed to temporary directory: $TEMPDIR"
	2366
	2367
	2368	# OUTPUT-DATEI-VERBINDUNGEN AUF TEMPORAERER DATEI ABLEGEN
	2369	# DIESE DATEI KANN VON SPAETER AUFZURUFENDEN BENUTZERPROZEDUREN GELESEN
	2370	# WERDEN, UM ZU LOKALEN DATEINAMEN GEHOERENDE PERMANENTE NAMEN ZU
	2371	# ERMITTELN
	2372	(( i = 0 ))
	2373	while (( i < iout ))
	2374	do
	2375	(( i = i + 1 ))
	2376	if [[ "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = tra \|\| "${actionout[$i]}" = trpe ]]
	2377	then
	2378	printf "${localout[$i]} ${actionout[$i]}\n${pathout[$i]}\n${localhost}_${fname}${endout[$i]}\n" >> OUTPUT_FILE_CONNECTIONS
	2379	else
	2380	printf "${localout[$i]} ${actionout[$i]}\n${pathout[$i]}\n${frelout[$i]}\n" >> OUTPUT_FILE_CONNECTIONS
	2381	fi
	2382	done
	2383
	2384
	2385	# EVTL. UEBERSETZUNGSAKTIONEN STARTEN
	2386	if [[ $do_compile = true ]]
	2387	then
	2388
	2389
	2390	# COMPILING WITH MAKE (ON NEC COMPILER IS CALLED ON HOST CROSS)
[82]	2391	printf "\n\n\n *** compilation starts \n$striche\n"
	2392	printf " *** compilation with make using following options:\n"
[211]	2393	printf " make depository: $make_depository"
[82]	2394	printf " compilername: $compiler_name\n"
	2395	printf " options: $fopts\n"
	2396	printf " preprocessor-directives: $cpp_options \n"
	2397	printf " linker-options: $lopts \n"
	2398	printf " source code files: $source_list \n"
	2399
	2400	if [[ $localhost = nech ]]
[1]	2401	then
[82]	2402	ssh 136.172.44.192 -l $usern ". /SX/opt/etc/initsx.sh; cd \$HOME/work/${usern}.$kennung; sxmake -f Makefile PROG=a.out F90=$compiler_name COPT=\"$cpp_options\" F90FLAGS=\"$fopts\" LDFLAGS=\"$lopts\" "
	2403	cp $TEMPDIR_COMPILE/a.out .
	2404	[[ $? != 0 ]] && compile_error=true
	2405	rm -rf $TEMPDIR_COMPILE
[197]	2406	elif [[ $localhost = lcsgib ]]
	2407	then
[221]	2408	printf " compiler is called via ssh on \"bicegate\" using module \"$mpilib\" \n"
	2409	ssh 130.73.232.102 -l $usern ". /usr/share/modules/init/bash; module load $mpilib; cd $TEMPDIR; make -f Makefile PROG=a.out F90=$compiler_name COPT=\"$cpp_options\" F90FLAGS=\"$fopts\" LDFLAGS=\"$lopts\" "
[197]	2410	[[ ! -f a.out ]] && compile_error=true
	2411	continue # ANDERENFALLS IST STATUS=1, FALLS A.OUT VORHANDEN
	2412	elif [[ $localhost = lcsgih ]]
	2413	then
[221]	2414	printf " compiler is called via ssh on \"hicegate2\" using module \"$mpilib\" \n"
	2415	ssh 130.75.4.103 -l $usern ". /usr/share/modules/init/bash; module load $mpilib; cd $TEMPDIR; make -f Makefile PROG=a.out F90=$compiler_name COPT=\"$cpp_options\" F90FLAGS=\"$fopts\" LDFLAGS=\"$lopts\" 2>&1 "
[197]	2416	[[ ! -f a.out ]] && compile_error=true
	2417	continue # ANDERENFALLS IST STATUS=1, FALLS A.OUT VORHANDEN
[1]	2418	else
[118]	2419	[[ $localhost = lctit ]] && export LM_LICENSE_FILE=27050@tggls
[82]	2420	make -f Makefile PROG=a.out F90=$compiler_name COPT="$cpp_options" F90FLAGS="$fopts" LDFLAGS="$lopts"
	2421	fi
[1]	2422
	2423	if [[ $? != 0 \|\| "$compile_error" = true \|\| "$module_compile_error" = true ]]
	2424	then
	2425	printf "\n +++ error occured while compiling or linking"
	2426	locat=compile
[181]	2427
[182]	2428	# WORKAROUND: REMOVE IF CONSTRUCT LATER, BUT KEEP THE EXIT!
[197]	2429	# if [[ $localhost != lcsgib && $localhost != lcsgih ]]
	2430	# then
[181]	2431	exit
[197]	2432	# else
	2433	# locat=normal
	2434	# fi
[1]	2435	else
	2436	printf "$striche\n *** compilation finished \n"
	2437	fi
	2438	fi
	2439
	2440
	2441	# FALLS NUR TESTWEISE KOMPILIERT WERDEN SOLLTE, IST MRUN JETZT FERTIG
	2442	if [[ $local_compile = true ]]
	2443	then
	2444	cd $HOME
	2445	rm -rf $TEMPDIR
	2446	locat=local_compile; exit
	2447	fi
	2448
	2449
	2450	# BEREITSTELLEN DER INPUT-DATEIEN
	2451	# SCHLEIFE UEBER ALLE VOM BENUTZER ANGEGEBENEN DATEIEN
	2452	(( i = 0 ))
	2453	while (( i < iin ))
	2454	do
	2455	(( i = i + 1 ))
	2456	if (( i == 1 ))
	2457	then
	2458	printf "\n\n *** providing INPUT-files:\n$striche"
	2459	fi
	2460
	2461
	2462	# OPTIONALE DATEIEN BEI NICHTVORHANDENSEIN UEBERGEHEN
	2463	if [[ "${transin[$i]}" = unavailable ]]
	2464	then
	2465	if [[ "${extin[$i]}" = "" \|\| "${extin[$i]}" = " " ]]
	2466	then
	2467	printf "\n +++ WARNING: input file \"${pathin[$i]}/${afname}${endin[$i]}\" "
	2468	printf "\n is not available!"
	2469	else
	2470	printf "\n +++ WARNING: input file \"${pathin[$i]}/${afname}${endin[$i]}.${extin[$i]}\" "
	2471	printf "\n is not available!"
	2472	fi
	2473	continue
	2474	fi
	2475
	2476	# PRUEFEN, OB EINZELDATEI ODER DATEI PRO PROZESSOR
	2477	files_for_pes=false; datentyp=file
	2478	if [[ "${actionin[$i]}" = pe && -n $numprocs ]]
	2479	then
	2480	files_for_pes=true; datentyp=directory
	2481	actionin[$i]=""
	2482	elif [[ "${actionin[$i]}" = pe && ! -n $numprocs ]]
	2483	then
	2484	actionin[$i]=""
	2485	elif [[ "${actionin[$i]}" = arpe && -n $numprocs ]]
	2486	then
	2487	files_for_pes=true; datentyp=directory
	2488	actionin[$i]="ar"
	2489	elif [[ "${actionin[$i]}" = arpe && ! -n $numprocs ]]
	2490	then
	2491	actionin[$i]="ar"
	2492	elif [[ "${actionin[$i]}" = flpe && -n $numprocs ]]
	2493	then
	2494	files_for_pes=true; datentyp=directory
	2495	actionin[$i]="fl"
	2496	elif [[ "${actionin[$i]}" = flpe && ! -n $numprocs ]]
	2497	then
	2498	actionin[$i]="fl"
	2499	fi
	2500
	2501	if [[ $files_for_pes = true ]]
	2502	then
	2503	printf "\n >>> INPUT: ${absnamein[$i]}/.... to ${localin[$i]}"
	2504	else
	2505	printf "\n >>> INPUT: ${absnamein[$i]} to ${localin[$i]}"
	2506	fi
	2507
	2508	# INPUT-DATEI FUER EINEN FORTSETZUNGSLAUF. ES WIRD GEPRUEFT,
	2509	# OB DIESE DATEI NOCH AUF DEM TEMPORAEREN DATENKATALOG VORHANDEN
	2510	# IST. FALLS NICHT, WIRD VERSUCHT, SIE ANSCHLIESSEND VOM ARCHIV-
	2511	# SERVER ZU HOLEN
	2512	if [[ "${actionin[$i]}" = fl ]]
	2513	then
	2514	printf "\n $datentyp will be fetched from temporary directory \"${tmp_data_catalog}\" !"
	2515	if [[ $files_for_pes = false ]]
	2516	then
	2517	if [[ -f "$tmp_data_catalog/${frelin[$i]}" ]]
	2518	then
	2519	ln $tmp_data_catalog/${frelin[$i]} ${localin[$i]}
	2520	got_tmp[$i]=true
	2521	elif [[ -f "$WORK/${frelin[$i]}" && $ignore_archive_error = true ]]
	2522	then
	2523	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" !"
	2524	printf "\n *** trying to use backup copy in \"$WORK\" "
	2525	cp $WORK/${frelin[$i]} ${localin[$i]}
	2526	else
	2527	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" "
	2528	printf "\n or \"$tmp_data_catalog\" does not exist!"
	2529	printf "\n *** trying to get copy from archive"
	2530	actionin[$i]=ar
	2531	fi
	2532	else
	2533	if [[ -d "$tmp_data_catalog/${frelin[$i]}" ]]
	2534	then
	2535	mkdir ${localin[$i]}
[149]	2536	cd $tmp_data_catalog/${frelin[$i]}
	2537	for file in $(ls *)
	2538	do
	2539	ln $file $TEMPDIR/${localin[$i]}
	2540	done
	2541	cd $TEMPDIR
[1]	2542	got_tmp[$i]=true
	2543	elif [[ -d "$WORK/${frelin[$i]}" && $ignore_archive_error = true ]]
	2544	then
	2545	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" !"
	2546	printf "\n *** trying to use backup copy in \"$WORK\" "
	2547	cp -r $WORK/${frelin[$i]} ${localin[$i]}
	2548	else
	2549	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" "
	2550	printf "\n or \"$tmp_data_catalog\" does not exist!"
	2551	printf "\n *** trying to get copy from archive"
	2552	actionin[$i]=ar
	2553	fi
	2554	fi
	2555	fi
	2556
	2557
	2558	# DATEI LIEGT AUF ARCHIV-SERVER
	2559	if [[ "${actionin[$i]}" = ar ]]
	2560	then
	2561
	2562	if [[ $files_for_pes = false ]]
	2563	then
	2564	printf "\n file will be restored from archive-system ($archive_system)!"
	2565	else
	2566	printf "\n directory will be restored from archive-system ($archive_system)!"
	2567	fi
	2568
	2569	file_restored=false
	2570
	2571	if [[ $archive_system = asterix ]]
	2572	then
	2573	do_stagein=true
	2574	(( stagein_anz = 0 ))
	2575	while [[ $do_stagein = true ]]
	2576	do
	2577	if [[ $files_for_pes = false ]]
	2578	then
	2579	stagein -O ${frelin[$i]} > STAGEIN_OUTPUT
	2580	else
	2581	stagein -t -O ${frelin[$i]} > STAGEIN_OUTPUT
	2582	fi
	2583	cat STAGEIN_OUTPUT
	2584	if [[ $(grep -c "st.msg:i24" STAGEIN_OUTPUT) != 0 ]]
	2585	then
	2586	file_restored=true
	2587	do_stagein=false
	2588	else
	2589	(( stagein_anz = stagein_anz + 1 ))
	2590	if (( stagein_anz == 10 ))
	2591	then
	2592	printf "\n +++ stagein stoped after 10 tries"
	2593	locat=stage
	2594	exit
	2595	fi
	2596	printf "\n +++ restoring from archive failed, trying again:"
	2597	sleep 900
	2598	fi
	2599	done
	2600	elif [[ $archive_system = DMF ]]
	2601	then
	2602	if [[ $files_for_pes = false ]]
	2603	then
	2604	printf "\n +++ restoring of single files impossible with $archive_system !\n"
	2605	locat=DMF
	2606	exit
	2607	else
	2608	find $ARCHIVE/${frelin[$i]} -type m -print \| dmget
	2609	cp -r $ARCHIVE/${frelin[$i]} $PWD
	2610	file_restored=true
	2611	fi
	2612	elif [[ $archive_system = tivoli ]]
	2613	then
	2614	if [[ $files_for_pes = false ]]
	2615	then
	2616	if [[ $localhost = ibmh ]]
	2617	then
	2618	ssh $usern@hdata.hlrn.de "cp $PERM/${frelin[$i]} $PWD"
	2619	else
	2620	ssh $usern@bdata.hlrn.de "cp $PERM/${frelin[$i]} $PWD"
	2621	fi
	2622	else
	2623	(( inode = 0 ))
	2624	while (( inode < nodes ))
	2625	do
	2626	if [[ $localhost = ibmh ]]
	2627	then
	2628	ssh $usern@hdata.hlrn.de "cd $PWD; tar xf $PERM/${frelin[$i]}/${frelin[$i]}.node_$inode.tar"
	2629	else
	2630	ssh $usern@bdata.hlrn.de "cd $PWD; tar xf $PERM/${frelin[$i]}/${frelin[$i]}.node_$inode.tar"
	2631	fi
	2632	(( inode = inode + 1 ))
	2633	done
	2634	fi
	2635	file_restored=true
	2636	elif [[ $archive_system = ut ]]
	2637	then
	2638	if [[ $files_for_pes = false ]]
	2639	then
	2640	cp $UT/${frelin[$i]} .
	2641	else
	2642	(( inode = 0 ))
	2643	while (( inode < nodes ))
	2644	do
	2645	tar xf $UT/${frelin[$i]}/${frelin[$i]}.node_$inode.tar
	2646	(( inode = inode + 1 ))
	2647	done
	2648	fi
	2649	file_restored=true
	2650	else
	2651	printf "\n +++ archive_system=\"$archive_system\" restore impossible!"
	2652	locat=rearchive
	2653	exit
	2654	fi
	2655
	2656	if [[ $file_restored = true ]]
	2657	then
	2658
	2659	# DATEI AUCH AUF TEMPORAERES DATENVERZEICHNIS LEGEN, DAMIT
	2660	# SIE BEI WEITEREN ZUGRIFFEN NOCH VORHANDEN IST
	2661	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog; chmod g+rx $tmp_data_catalog
	2662	if [[ $files_for_pes = false ]]
	2663	then
	2664	ln -f ${frelin[$i]} $tmp_data_catalog/${frelin[$i]}
	2665	else
	2666	mkdir $tmp_data_catalog/${frelin[$i]}
	2667	ln -f ${frelin[$i]}/* $tmp_data_catalog/${frelin[$i]}
	2668	fi
	2669	got_tmp[$i]=true
	2670
	2671	# DATEI UNTER LOKALEM NAMEN ZUR VERFUEGUNG STELLEN
	2672	mv ${frelin[$i]} ${localin[$i]}
	2673
	2674	fi
	2675	fi
	2676
	2677
	2678	# DATEI LIEGT IM VOM BENUTZER ANGEGEBENEN VERZEICHNIS
	2679	if [[ "${actionin[$i]}" = "" \|\| "${actionin[$i]}" = "di" \|\| "${actionin[$i]}" = "npe" ]]
	2680	then
	2681
	2682	if [[ "${actionin[$i]}" = "npe" && -n $numprocs ]]
	2683	then
	2684
	2685	# DATEI WIRD FUER DIE PROZESSOREN EINES PARALLERECHNERS BEREITGESTELLT
	2686	printf "\n file will be provided for $numprocs processors"
	2687	mkdir ${localin[$i]}
	2688	ival=$numprocs
	2689	(( ii = 0 ))
	2690	while (( ii <= ival-1 ))
	2691	do
	2692	if (( ii < 10 ))
	2693	then
	2694	cp ${absnamein[$i]} ${localin[$i]}/_000$ii
	2695	elif (( ii < 100 ))
	2696	then
	2697	cp ${absnamein[$i]} ${localin[$i]}/_00$ii
	2698	elif (( ii < 1000 ))
	2699	then
	2700	cp ${absnamein[$i]} ${localin[$i]}/_0$ii
	2701	else
	2702	cp ${absnamein[$i]} ${localin[$i]}/_$ii
	2703	fi
	2704	(( ii = ii + 1 ))
	2705	done
	2706
	2707	else
	2708
	2709	if [[ $files_for_pes = true ]]
	2710	then
	2711
	2712	# DIE DEN PROZESSOREN EINES PARALLELRECHNERS ZUGEHOERIGEN
	2713	# DATEIEN WERDEN BEREITGESTELLT, INDEM ZUERST DER GESAMTE
	2714	# KATALOGINHALT KOPIERT UND DANN DIE EINZELNEN DATEIEN
	2715	# PER MOVE UMBENANNT WERDEN
	2716	printf "\n providing $numprocs files for the respective processors"
	2717	mkdir ${localin[$i]}
[183]	2718	if [[ $link_local_input = true ]]
	2719	then
	2720	printf " using ln -f\n"
	2721	cd ${absnamein[$i]}
	2722	for file in $(ls *)
	2723	do
	2724	ln -f $file ${localin[$i]}
	2725	done
	2726	cd $TEMPDIR
	2727	fi
	2728	# If "ln -f" fails of if "$link_local_input = false" do a normal "cp -r"
	2729	if [[ ! -f "${localin[$i]}/_0000" ]]
	2730	then
	2731	if [[ $link_local_input = true ]]
	2732	then
	2733	printf " ln failed for .../_0000, using cp...\n"
	2734	fi
	2735	cp -r ${absnamein[$i]}/* ${localin[$i]}
	2736	fi
[1]	2737
	2738	else
	2739	# BEREITSTELLUNG AUF EINPROZESSORRECHNERN
[183]	2740	if [[ $link_local_input = true ]]
	2741	then
	2742	printf " using ln -f\n"
	2743	ln -f ${absnamein[$i]} ${localin[$i]}
	2744	fi
	2745	# If "ln -f" fails of if "$link_local_input = false" do a normal "cp"
	2746	if [[ ! -f "${localin[$i]}" ]]
	2747	then
	2748	if [[ $link_local_input = true ]]
	2749	then
	2750	printf " ln failed, using cp...\n"
	2751	fi
	2752	cp ${absnamein[$i]} ${localin[$i]}
	2753	fi
[1]	2754	fi
	2755	fi
	2756	fi
	2757
	2758	done
	2759	if (( i != 0 ))
	2760	then
	2761	printf "\n$striche\n *** all INPUT-files provided \n"
	2762	fi
	2763
	2764
	2765	# EVENTUELLE INPUT-KOMMANDOS ABARBEITEN
	2766	(( i = 0 ))
	2767	while (( i < iic ))
	2768	do
	2769	(( i = i + 1 ))
	2770	if (( i == 1 ))
	2771	then
	2772	printf "\n\n *** execution of INPUT-commands:\n$striche"
	2773	fi
	2774	printf "\n >>> ${in_command[$i]}"
	2775	eval ${in_command[$i]}
	2776	if (( i == iic ))
	2777	then
	2778	printf "\n$striche\n"
	2779	fi
	2780	done
	2781
	2782
	2783	# VERBLEIBENDE CPU-ZEIT BERECHNEN
	2784	cpurest=${cpumax}.
	2785
	2786
[260]	2787	# START DVR STREAMING SERVER
	2788	if [[ $(echo $package_list \| grep -c dvrp_graphics) != 0 ]]
	2789	then
	2790	if [[ "$dvr_server" != "" ]]
	2791	then
	2792
	2793	printf "\n\n *** preparing the dvr streaming server configuration file"
	2794
	2795	# Check, if a dvr server is already running
	2796	running_dvrserver_id=`echo $(ps -edaf \| grep .dvrserver.config \| grep -v grep) \| cut -d" " -f2`
	2797	if [[ "$running_dvrserver_id" != "" ]]
	2798	then
	2799
[261]	2800	printf "\n\n +++ WARNING: A dvr server with id=$running_dvrserver_id is already running!"
[260]	2801	printf "\n This server is used instead starting a new one!"
[261]	2802	printf "\n If required, script \"process_dvr_output\" has to be run manually."
[260]	2803
	2804	else
	2805
	2806	# COPY CONFIGURATION FILE FOR STREAMING SERVER FROM REPOSITORY TO HERE
	2807	if [[ -f ${PALM_BIN}/.dvrserver.config ]]
	2808	then
	2809	cp ${PALM_BIN}/.dvrserver.config .
	2810
	2811	# Entering the BASEDIR, UID and GID into this file
	2812	user_id=`id -u`
	2813	group_id=`id -g`
	2814	# & is needed as seperator, because TEMPDIR contains /
	2815	sed "s&<replace by dvr data directory>&${TEMPDIR}&g" .dvrserver.config > .dvrserver.1
	2816	sed "s/<replace by user id>/$user_id/g" .dvrserver.1 > .dvrserver.2
	2817	sed "s/<replace by group id>/$group_id/g" .dvrserver.2 > .dvrserver.3
	2818	mv .dvrserver.3 .dvrserver.config
	2819	rm .dvrserver.1 .dvrserver.2
	2820
	2821	# Start dvr server in background, get his id and print on terminal
	2822	$dvr_server .dvrserver.config >> DVR_LOGFILE 2>&1 &
	2823	dvrserver_id=`echo $(ps -edaf \| grep .dvrserver.config) \| cut -d" " -f2`
	2824	printf "\n *** streaming server with id=$dvrserver_id is started in background"
	2825	local_dvrserver_running=.TRUE.
	2826	else
	2827	printf "\n +++ missing file \".dvrserver.config\" in directory:"
	2828	printf "\n \"$PALM_BIN\" "
	2829	locat=dvr
	2830	exit
	2831	fi
	2832
	2833	fi
	2834
	2835	else
	2836	printf "\n\n --- INFORMATIVE: no dvr streaming server will be started"
	2837	fi
	2838	fi
	2839
	2840
	2841	# NAMELIST-DATEI MIT WERTEN VON ENVIRONMENT-VARIABLEN ERZEUGEN (ZU
	2842	# LESEN VON PALM)
	2843	cat > ENVPAR << %%END%%
	2844	&envpar run_identifier = '$fname', host = '$localhost',
	2845	write_binary = '$write_binary', tasks_per_node = $tasks_per_node,
	2846	maximum_cpu_time_allowed = ${cpumax}.,
	2847	revision = '$global_revision',
	2848	local_dvrserver_running = $local_dvrserver_running /
	2849
	2850	%%END%%
	2851
	2852
[1]	2853	# PROGRAMMSTART
	2854	printf "\n\n *** execution starts in directory\n \"`pwd`\"\n$striche\n"
	2855	PATH=$PATH:$TEMPDIR
	2856
	2857	if [[ "$cond1" = debug \|\| "$cond2" = debug ]]
	2858	then
	2859	if [[ "$ENVIRONMENT" = BATCH ]]
	2860	then
[211]	2861	if [[ $(echo $localhost \| cut -c1-5) != lcsgi ]]
	2862	then
	2863	printf "\n +++ debug is allowed in interactive mode only"
	2864	locat=debug
	2865	exit
	2866	fi
[1]	2867	fi
[5]	2868	if [[ $localhost = decalpha ]]
[1]	2869	then
	2870	dxladebug a.out
	2871	elif [[ $localhost = ibmb \|\| $localhost = ibmh ]]
	2872	then
	2873
	2874	# SETUP THE IBM MPI ENVIRONMENT
	2875	export MP_SHARED_MEMORY=yes
	2876	export AIXTHREADS_SCOPE=S
	2877	export OMP_NUM_THREADS=$threads_per_task
	2878	export AUTHSTATE=files
	2879	export XLFRTEOPTS="nlwidth=132:err_recovery=no" # RECORD-LENGTH OF NAMELIST-OUTPUT
	2880
	2881	# FOLLOWING OPTIONS ARE MANDATORY FOR TOTALVIEW
	2882	export MP_ADAPTER_USE=shared
	2883	export MP_CPU_USE=multiple
	2884	export MP_TIMEOUT=1200
	2885
	2886	unset MP_TASK_AFFINITY
	2887
	2888	# SO FAR, TOTALVIEW NEEDS HOSTFILE MECHANISM FOR EXECUTION
	2889	#(( ii = 1 ))
	2890	#while (( ii <= $numprocs ))
	2891	#do
	2892	# echo $localhost_realname >> hostfile
	2893	# (( ii = ii + 1 ))
	2894	#done
	2895	#export MP_HOSTFILE=hostfile
	2896
	2897	if [[ "$LOADLBATCH" = yes ]]
	2898	then
	2899	totalview poe a.out $ROPTS
	2900	else
	2901	echo totalview poe -a a.out -procs $numprocs -rmpool 0 -nodes 1 $ROPTS
	2902	export TVDSVRLAUNCHCMD=ssh
	2903	totalview poe -a a.out -procs $numprocs -rmpool 0 -nodes 1 $ROPTS
	2904	fi
[211]	2905	elif [[ $(echo $localhost \| cut -c1-5) = lcsgi ]]
	2906	then
	2907	# CURRENTLY NO DEBUGGER ON LCSGI
	2908	if [[ $run_coupled_model = true ]]
	2909	then
	2910	printf "\n +++ no debug in coupled mode available on \"$localhost\" "
	2911	locat=debug
	2912	exit
[223]	2913	else
	2914	echo "no_coupling" > runfile_atmos
[211]	2915	fi
	2916	(( ii = $numprocs / $threads_per_task ))
	2917	export OMP_NUM_THREADS=$threads_per_task
	2918	echo "OMP_NUM_THREADS=$OMP_NUM_THREADS"
	2919	if [[ $threads_per_task != 1 ]]
	2920	then
	2921	printf "\n threads per task: $threads_per_task"
	2922	fi
	2923	printf "\n\n"
[223]	2924	if [[ $( echo $mpilib \| cut -c1-3 ) = mpt ]]
	2925	then
	2926	# export MPI_LAUNCH_TIMEOUT=360
	2927	if [[ "$totalview" = true ]]
	2928	then
	2929	printf "\n running totalview debugger"
	2930	mpiexec_mpt -tv -n $ii ./a.out $ROPTS < runfile_atmos
	2931	else
	2932	mpiexec_mpt -np $ii ./a.out $ROPTS < runfile_atmos
	2933	fi
	2934	elif [[ $( echo $mpilib \| cut -c1-3 ) = mva ]]
	2935	then
	2936	# ulimit -s 300000 # A too large stack size causes problems
	2937	# export MV2_NUM_PORTS=2
	2938	# export MV2_CPU_MAPPING=0:1:2:3
	2939	mpiexec ./a.out $ROPTS < runfile_atmos
	2940	fi
[1]	2941	else
	2942	printf "\n +++ no debug available on \"$localhost\" "
	2943	printf "\n or not implemented in mrun so far"
	2944	locat=debug
	2945	exit
	2946	fi
	2947	else
	2948	if [[ -n $numprocs ]]
	2949	then
	2950
	2951	# RUNNING THE PROGRAM ON PARALLEL MACHINES
	2952	if [[ $(echo $host \| cut -c1-3) = ibm ]]
	2953	then
	2954	# SETUP THE IBM MPI ENVIRONMENT
	2955	export MP_SHARED_MEMORY=yes
	2956	export AIXTHREAD_SCOPE=S
	2957	export OMP_NUM_THREADS=$threads_per_task
	2958	export XLSMPOPTS="spins=0:yields=0:stack=20000000"
	2959	export AUTHSTATE=files
	2960	export XLFRTEOPTS="nlwidth=132:err_recovery=no" # RECORD-LENGTH OF NAMELIST-OUTPUT
	2961	# export MP_PRINTENV=yes
	2962
	2963	# TUNING-VARIABLEN ZUR VERBESSERUNG DER KOMMUNIKATION
	2964	# ZEIGEN ABER DERZEIT (SEP 04, FEDERATION) KAUM WIRKUNG
	2965	export MP_WAIT_MODE=poll
	2966	[[ $node_usage = not_shared ]] && export MP_SINGLE_THREAD=yes
	2967	# export MP_EAGER_LIMIT=65535
	2968
	2969	# # TESTWEISE FUER TURBOMPI (JAN 05)
	2970	# export MPJ_MTAB=128
	2971	# export MPJ_ALLTOALL=1
	2972	# export MPJ_ALLTOALLV=1
	2973
	2974	if [[ "$LOADLBATCH" = yes ]]
	2975	then
	2976	printf "\n--- Control: OMP_NUM_THREADS = \"$OMP_NUM_THREADS\" \n"
	2977	if [[ "$cond1" = hpmcount \|\| "$cond2" = hpmcount ]]
	2978	then
[102]	2979	/opt/optibm/HPM_2_4_1/bin/hpmcount a.out $ROPTS
[1]	2980	else
[102]	2981	poe ./a.out $ROPTS
[1]	2982	fi
	2983	else
	2984	if [[ $localhost = ibmb \|\| $localhost = ibmh \|\| $localhost = ibms ]]
	2985	then
[102]	2986	poe a.out -procs $numprocs -nodes 1 -rmpool 0 $ROPTS
[1]	2987	elif [[ $localhost = ibmy ]]
	2988	then
	2989	if [[ -f $hostfile ]]
	2990	then
	2991	cp $hostfile hostfile
	2992	else
	2993	(( ii = 1 ))
	2994	while (( ii <= $numprocs ))
	2995	do
	2996	echo $localhost_realname >> hostfile
	2997	(( ii = ii + 1 ))
	2998	done
	2999	fi
	3000	export MP_HOSTFILE=hostfile
[102]	3001	./a.out -procs $tasks_per_node $ROPTS
[1]	3002	else
	3003	if [[ "$host_file" = "" ]]
	3004	then
	3005	printf "\n +++ no hostfile given in configuration file"
	3006	locat=config_file
	3007	exit
	3008	else
	3009	eval host_file=$host_file
	3010	fi
	3011	export MP_HOSTFILE=$host_file
[102]	3012	poe a.out -procs $numprocs -tasks_per_node $numprocs $ROPTS
[1]	3013	fi
	3014	fi
[251]	3015	elif [[ $host = nech \|\| $host = necriam ]]
[1]	3016	then
	3017	(( ii = nodes ))
	3018	if [[ $ii = 1 ]]
	3019	then
	3020	export F_ERRCNT=0 # acceptable number of errors before program is stopped
	3021	export MPIPROGINF=YES
[61]	3022	# export F_TRACE=YES\|FMT1\|FMT2 # output of ftrace informations to job protocol
[1]	3023	echo "*** execution on single node with mpirun"
[102]	3024	mpirun -np $numprocs ./a.out $ROPTS
[1]	3025	else
	3026	(( i = 0 ))
	3027	while (( i < ii ))
	3028	do
	3029	echo "-h $i -p $tasks_per_node -e ./mpi_exec_shell" >> multinode_config
	3030	(( i = i + 1 ))
	3031	done
	3032
	3033	echo "#!/bin/sh" > mpi_exec_shell
	3034	echo " " >> mpi_exec_shell
	3035	echo "set -u" >> mpi_exec_shell
	3036	echo "F_ERRCNT=0" >> mpi_exec_shell
	3037	echo "MPIPROGINV=YES" >> mpi_exec_shell
	3038	echo "OMP_NUM_THREADS=$threads_per_task" >> mpi_exec_shell
	3039	echo "cpurest=$cpurest" >> mpi_exec_shell
	3040	echo "fname=$fname" >> mpi_exec_shell
	3041	echo "localhost=$localhost" >> mpi_exec_shell
	3042	echo "return_addres=$return_addres" >> mpi_exec_shell
	3043	echo "return_username=$return_username" >> mpi_exec_shell
	3044	echo "tasks_per_node=$tasks_per_node" >> mpi_exec_shell
	3045	echo "write_binary=$write_binary" >> mpi_exec_shell
	3046	echo "use_seperate_pe_for_dvrp_output=$use_seperate_pe_for_dvrp_output" >> mpi_exec_shell
	3047	echo " " >> mpi_exec_shell
	3048	echo "export F_ERRCNT" >> mpi_exec_shell
	3049	echo "export MPIPROGINV" >> mpi_exec_shell
	3050	echo "export OMP_NUM_THREADS" >> mpi_exec_shell
	3051	echo "export cpurest" >> mpi_exec_shell
	3052	echo "export fname" >> mpi_exec_shell
	3053	echo "export localhost" >> mpi_exec_shell
	3054	echo "export return_addres" >> mpi_exec_shell
	3055	echo "export return_username" >> mpi_exec_shell
	3056	echo "export tasks_per_node" >> mpi_exec_shell
	3057	echo "export write_binary" >> mpi_exec_shell
	3058	echo "export use_seperate_pe_for_dvrp_output" >> mpi_exec_shell
	3059	echo " " >> mpi_exec_shell
[102]	3060	echo "exec ./a.out" >> mpi_exec_shell
[1]	3061
	3062	chmod u+x mpi_exec_shell
	3063	export MPIPROGINF=YES
	3064	mpirun -f multinode_config &
	3065	wait
	3066
	3067	fi
[82]	3068	elif [[ $(echo $host \| cut -c1-2) = lc && $host != lctit ]]
[1]	3069	then
	3070
	3071	# COPY HOSTFILE FROM SOURCE DIRECTORY OR CREATE IT, IF IT
	3072	# DOES NOT EXIST
[179]	3073	if [[ $host != lcsgih && $host != lcsgib ]]
[1]	3074	then
[179]	3075	if [[ -f $hostfile ]]
	3076	then
	3077	cp $hostfile hostfile
	3078	else
	3079	(( ii = 1 ))
	3080	while (( ii <= $numprocs / $threads_per_task ))
	3081	do
	3082	echo $localhost_realname >> hostfile
	3083	(( ii = ii + 1 ))
	3084	done
	3085	fi
	3086	eval zeile=\"`head -n $ii hostfile`\"
	3087	printf "\n *** running on: $zeile"
[1]	3088	fi
[179]	3089
[1]	3090	(( ii = $numprocs / $threads_per_task ))
	3091	export OMP_NUM_THREADS=$threads_per_task
[246]	3092	# echo "OMP_NUM_THREADS=$OMP_NUM_THREADS"
[1]	3093	if [[ $threads_per_task != 1 ]]
	3094	then
	3095	printf "\n threads per task: $threads_per_task"
	3096	fi
[102]	3097	if [[ $run_coupled_model = false ]]
[1]	3098	then
[223]	3099	echo "no_coupling" > runfile_atmos
[102]	3100	printf "\n\n"
[179]	3101	if [[ $host = lcsgih \|\| $host = lcsgib ]]
[164]	3102	then
[221]	3103	if [[ $( echo $mpilib \| cut -c1-3 ) = mpt ]]
	3104	then
	3105	# export MPI_LAUNCH_TIMEOUT=360
[223]	3106	mpiexec_mpt -np $ii ./a.out $ROPTS < runfile_atmos
[221]	3107	elif [[ $( echo $mpilib \| cut -c1-3 ) = mva ]]
	3108	then
	3109	# ulimit -s 300000 # A too large stack size causes problems
	3110	# export MV2_NUM_PORTS=2
	3111	# export MV2_CPU_MAPPING=0:1:2:3
[223]	3112	mpiexec ./a.out $ROPTS < runfile_atmos
[221]	3113	fi
[179]	3114	elif [[ $host = lcxt4 ]]
	3115	then
[223]	3116	aprun -n $ii -N $tasks_per_node a.out $ROPTS < runfile_atmos
[164]	3117	else
[223]	3118	mpiexec -machinefile hostfile -n $ii a.out < runfile_atmos $ROPTS
[164]	3119	fi
[1]	3120	else
[164]	3121
[206]	3122	# currently there is no full MPI-2 support on ICE and XT4
	3123	(( iia = $numprocs_atmos / $threads_per_task ))
	3124	(( iio = $numprocs_ocean / $threads_per_task ))
	3125	printf "\n coupled run ($iia atmosphere, $iio ocean)"
	3126	printf "\n using $coupled_mode coupling"
[102]	3127	printf "\n\n"
[164]	3128
[206]	3129	if [[ $coupled_mode = "mpi2" ]]
[164]	3130	then
[206]	3131	echo "atmosphere_to_ocean $iia $iio" > runfile_atmos
	3132	echo "ocean_to_atmosphere $iia $iio" > runfile_ocean
	3133	if [[ $host = lcsgih \|\| $host = lcsgib ]]
	3134	then
[197]	3135
[221]	3136	if [[ $( echo $mpilib \| cut -c1-3 ) = mpt ]]
	3137	then
	3138	# export MPI_LAUNCH_TIMEOUT=360
	3139	mpiexec_mpt -np $iia ./a.out $ROPTS < runfile_atmos &
	3140	mpiexec_mpt -np $iio ./a.out $ROPTS < runfile_ocean &
	3141	elif [[ $( echo $mpilib \| cut -c1-3 ) = mva ]]
	3142	then
	3143	# ulimit -s 300000 # A too large stack size causes problems
	3144	# export MV2_NUM_PORTS=2
	3145	# export MV2_CPU_MAPPING=0:1:2:3
	3146	mpiexec -n $iia ./a.out $ROPTS < runfile_atmos &
	3147	mpiexec -n $iio ./a.out $ROPTS < runfile_ocean &
	3148	fi
[197]	3149
[206]	3150	elif [[ $host = lcxt4 ]]
	3151	then
[197]	3152
[206]	3153	aprun -n $iia -N $tasks_per_node a.out < runfile_atmos $ROPTS &
	3154	aprun -n $iio -N $tasks_per_node a.out < runfile_ocean $ROPTS &
	3155
	3156	else
	3157	# WORKAROUND BECAUSE mpiexec WITH -env option IS NOT AVAILABLE ON SOME SYSTEMS
	3158	mpiexec -machinefile hostfile -n $iia a.out $ROPTS < runfile_atmos &
	3159	mpiexec -machinefile hostfile -n $iio a.out $ROPTS < runfile_ocean &
	3160	# mpiexec -machinefile hostfile -n $iia -env coupling_mode atmosphere_to_ocean a.out $ROPTS &
	3161	# mpiexec -machinefile hostfile -n $iio -env coupling_mode ocean_to_atmosphere a.out $ROPTS &
	3162	fi
	3163	wait
	3164
[164]	3165	else
	3166
[206]	3167	echo "coupled_run $iia $iio" > runfile_atmos
	3168	if [[ $host = lcsgih \|\| $host = lcsgib ]]
	3169	then
	3170
[221]	3171	if [[ $( echo $mpilib \| cut -c1-3 ) = mpt ]]
	3172	then
	3173	# export MPI_LAUNCH_TIMEOUT=360
	3174	mpiexec_mpt -np $ii ./a.out $ROPTS < runfile_atmos
	3175	elif [[ $( echo $mpilib \| cut -c1-3 ) = mva ]]
	3176	then
	3177	# ulimit -s 300000 # A too large stack size causes problems
	3178	# export MV2_NUM_PORTS=2
	3179	# export MV2_CPU_MAPPING=0:1:2:3
	3180	mpiexec ./a.out $ROPTS < runfile_atmos
	3181	fi
[206]	3182
	3183	elif [[ $host = lcxt4 ]]
	3184	then
	3185
	3186	aprun -n $ii -N $tasks_per_node a.out < runfile_atmos $ROPTS
	3187
	3188	fi
	3189	wait
[164]	3190	fi
[102]	3191
	3192	# if [[ $scirocco = true ]]
	3193	# then
	3194	# mpiexec -machinefile hostfile -n $ii a.out $ROPTS
	3195	# else
	3196	# mpirun -machinefile hostfile -np $ii a.out $ROPTS
	3197	# fi
[206]	3198	fi
[1]	3199	elif [[ $host = decalpha ]]
	3200	then
[102]	3201	dmpirun -np $numprocs a.out $ROPTS
[1]	3202	elif [[ $host = lctit ]]
	3203	then
	3204	export runfile=runfile.$kennung
	3205
	3206	echo "cd $PWD" > $runfile
	3207	echo "export OMP_NUM_THREADS=$OMP_NUM_THREADS" >> $runfile
	3208	echo "export cpurest=$cpurest" >> $runfile
	3209	echo "export fname=$fname" >> $runfile
	3210	echo "export localhost=$localhost" >> $runfile
	3211	echo "export return_addres=$return_addres" >> $runfile
	3212	echo "export return_username=$return_username" >> $runfile
	3213	echo "export tasks_per_node=$tasks_per_node" >> $runfile
	3214	echo "export write_binary=$write_binary" >> $runfile
	3215	echo "export use_seperate_pe_for_dvrp_output=$use_seperate_pe_for_dvrp_output" >> $runfile
	3216	echo "./a.out" >> $runfile
	3217	chmod u+x $runfile
	3218
	3219	if [[ "$QUEUE" = interactive ]]
	3220	then
[102]	3221	mpirun -np $numprocs a.out $ROPTS
[1]	3222	else
[127]	3223	(( mem_tsubame = $memory / 1024.0 ))
	3224	echo "Memory for Tsubame for each process in GB:", $mem_tsubame
[118]	3225	# n1ge -fore -g 1S060156 -mpi $numprocs -mem 4 -N palm -q $queue a.out $ROPTS
[265]	3226	# /n1ge/TITECH_GRID/tools/bin/n1ge -fore -g $group_number -mpi ${numprocs}:$tasks_per_node -mem $mem_tsubame -N palm -rt $minuten -q $queue a.out $ROPTS
	3227	n1ge -fore -g $group_number -mpi ${numprocs}:$tasks_per_node -mem $mem_tsubame -N palm -rt $minuten -q $queue a.out $ROPTS
[1]	3228	fi
	3229
	3230	rm $runfile
	3231	else
[102]	3232	mpprun -n $numprocs a.out $ROPTS
[1]	3233	fi
	3234	[[ $? != 0 ]] && execution_error=true
	3235
	3236
	3237	# PERFORMANCE-AUSWERTUNG MIT APPRENTICE
	3238	if [[ "$cond1" = apprentice \|\| "$cond2" = apprentice ]]
	3239	then
	3240	apprentice
	3241	fi
	3242	else
[102]	3243	a.out $ROPTS
[1]	3244	fi
	3245	fi
	3246	if [[ $? != 0 \|\| $execution_error = true ]]
	3247	then
	3248
	3249	# ABBRUCH BEI LAUFZEITFEHLER
[102]	3250	# [[ ! ( "$cond1" = debug \|\| "$cond2" = debug ) ]] && cat aout_output*
[1]	3251	printf "\n +++ runtime error occured"
	3252	locat=execution
	3253	exit
	3254	else
[102]	3255	# [[ ! ( "$cond1" = debug \|\| "$cond2" = debug ) ]] && cat aout_output*
[1]	3256	printf "\n$striche\n *** execution finished \n"
[260]	3257
[261]	3258	# Stop the dvr streaming server and process the dvr output in order
	3259	# to create dvrs- and html-files containing all streams
[260]	3260	if [[ "$dvrserver_id" != "" ]]
	3261	then
	3262	kill $dvrserver_id
	3263	printf "\n *** dvr server with id=$dvrserver_id has been stopped"
[261]	3264
[262]	3265	# If there is a directory, data have been output by the
	3266	# streaming server. Otherwise, user has chosen dvrp_output=local
	3267	if [[ -d DATA_DVR ]]
	3268	then
[261]	3269
[262]	3270	# Add the current dvr configuration file to the dvr output
	3271	# directory
	3272	cp .dvrserver.config DATA_DVR
	3273
	3274	# Process the dvr output (option -s for also generating
	3275	# sequence mode data)
	3276	process_dvr_output -d DATA_DVR -f $fname -s
	3277
	3278	else
	3279
	3280	# Process the local output
	3281	process_dvr_output -l -d DATA_DVR -f $fname
	3282
	3283	fi
	3284
	3285	elif [[ $(echo $package_list \| grep -c dvrp_graphics) != 0 ]]
	3286	then
	3287
	3288	# Process dvr output generated in local mode (dvrp_output=local)
	3289	process_dvr_output -l -d DATA_DVR -f $fname
	3290
[260]	3291	fi
[1]	3292	fi
	3293
	3294
	3295
	3296	# EVENTUELLE OUTPUT-KOMMANDOS ABARBEITEN
	3297	(( i = 0 ))
	3298	while (( i < ioc ))
	3299	do
	3300	(( i = i + 1 ))
	3301	if (( i == 1 ))
	3302	then
	3303	printf "\n\n *** execution of OUTPUT-commands:\n$striche"
	3304	fi
	3305	printf "\n >>> ${out_command[$i]}"
	3306	eval ${out_command[$i]}
	3307	if (( i == ioc ))
	3308	then
	3309	printf "\n$striche\n"
	3310	fi
	3311	done
	3312
	3313
	3314	# EVTL. INHALT DES AKTUELLEN VERZEICHNISSES AUSGEBEN
	3315	if [[ $do_trace = true ]]
	3316	then
	3317	printf "\n\n"
	3318	ls -al
	3319	fi
	3320
	3321
	3322
	3323	# OUTPUT-DATEIEN AN IHRE ZIELORTE KOPIEREN
	3324	(( i = 0 ))
	3325	while (( i < iout ))
	3326	do
	3327	(( i = i + 1 ))
	3328	if (( i == 1 ))
	3329	then
	3330	printf "\n\n *** saving OUTPUT-files:\n$striche"
	3331	fi
	3332
	3333	# PRUEFEN, OB EINZELDATEI ODER DATEI PRO PROZESSOR
	3334	files_for_pes=false; filetyp=file
	3335	if [[ "${actionout[$i]}" = pe && -n $numprocs ]]
	3336	then
	3337	files_for_pes=true; filetyp=directory
	3338	actionout[$i]=""
	3339	elif [[ "${actionout[$i]}" = pe && ! -n $numprocs ]]
	3340	then
	3341	actionout[$i]=""
	3342	elif [[ "${actionout[$i]}" = arpe && -n $numprocs ]]
	3343	then
	3344	files_for_pes=true; filetyp=directory
	3345	actionout[$i]="ar"
	3346	elif [[ "${actionout[$i]}" = arpe && ! -n $numprocs ]]
	3347	then
	3348	actionout[$i]="ar"
	3349	elif [[ "${actionout[$i]}" = flpe && -n $numprocs ]]
	3350	then
	3351	files_for_pes=true; filetyp=directory
	3352	actionout[$i]="fl"
	3353	elif [[ "${actionout[$i]}" = flpe && ! -n $numprocs ]]
	3354	then
	3355	actionout[$i]="fl"
	3356	elif [[ "${actionout[$i]}" = trpe && -n $numprocs ]]
	3357	then
	3358	files_for_pes=true; filetyp=directory
	3359	actionout[$i]="tr"
	3360	elif [[ "${actionout[$i]}" = trpe && ! -n $numprocs ]]
	3361	then
	3362	actionout[$i]="tr"
	3363	fi
	3364
	3365	if [[ ! -f ${localout[$i]} && $files_for_pes = false ]]
	3366	then
	3367	printf "\n +++ temporary OUTPUT-file ${localout[$i]} does not exist\n"
[260]	3368	elif [[ ! -d ${localout[$i]} && $files_for_pes = true ]]
[1]	3369	then
	3370	printf "\n +++ temporary OUTPUT-file ${localout[$i]}/.... does not exist\n"
	3371	else
	3372
	3373
	3374	# KOPIEREN PER FTP/SCP (IMMER IM BINAERMODUS, -M: FALLS ZIELKATALOG
	3375	# NICHT VORHANDEN, WIRD VERSUCHT, IHN ANZULEGEN), ABER NUR BEI
	3376	# REMOTE-RECHNUNGEN
	3377	if [[ "${actionout[$i]}" = tr ]]
	3378	then
	3379	if [[ $localhost != $fromhost ]]
	3380	then
	3381	if [[ $files_for_pes = false ]]
	3382	then
	3383	cps=""
	3384	cst=""
	3385	else
	3386	cps=-c
	3387	cst="/"
	3388	fi
	3389	if [[ $localhost = ibmh \|\| $localhost = ibmb \|\| $localhost = nech ]]
	3390	then
	3391
	3392	# TRANSFER IN EIGENSTAENDIGEM JOB
	3393	# ZUERST KOPIE DER DATEI INS TEMPORAERE DATENVERZEICHNIS
	3394	[[ ! -d $tmp_data_catalog/TRANSFER ]] && mkdir -p $tmp_data_catalog/TRANSFER
	3395	file_to_transfer=${fname}_${localout[$i]}_to_transfer_$kennung
	3396	if [[ $files_for_pes = false ]]
	3397	then
	3398	ln -f ${localout[$i]} $tmp_data_catalog/TRANSFER/$file_to_transfer
	3399	else
	3400	mkdir $tmp_data_catalog/TRANSFER/$file_to_transfer
	3401	ln ${localout[$i]}/* $tmp_data_catalog/TRANSFER/$file_to_transfer
	3402	fi
	3403
	3404	echo "set -x" > transfer_${localout[$i]}
	3405	echo "cd $tmp_data_catalog/TRANSFER" >> transfer_${localout[$i]}
[82]	3406
	3407	printf "\n >>> OUTPUT: ${localout[$i]}$cst by SCP in seperate job to"
	3408	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}$cst"
	3409	printf "\n or higher cycle\n"
	3410	echo "batch_scp $cps -b -m -u $return_username $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
	3411
[1]	3412	echo "[[ \$? = 0 ]] && rm $file_to_transfer" >> transfer_${localout[$i]}
	3413
	3414	if [[ $localhost = nech ]]
	3415	then
[82]	3416	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 900 transfer_${localout[$i]}
[1]	3417	else
	3418	if [[ "$LOGNAME" = b323013 ]]
	3419	then
[164]	3420	subjob -v -q c1 -X 0 -m 1000 -t 900 -c $job_catalog transfer_${localout[$i]}
[1]	3421	else
[164]	3422	subjob -d -v -q c1 -X 0 -m 1000 -t 900 -c $job_catalog transfer_${localout[$i]}
[1]	3423	fi
	3424	fi
	3425
	3426	else
	3427
	3428	# TRANSFER INNERHALB DIESES JOBS
	3429	transfer_failed=false
[82]	3430	printf "\n >>> OUTPUT: ${localout[$i]}$cst by SCP to"
	3431	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}$cst\n"
	3432	batch_scp $cps -b -m -u $return_username $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
	3433	[[ $? != 0 ]] && transfer_failed=true
[1]	3434
	3435	# BEI FEHLGESCHLAGENEM TRANSFER SICHERUNGSKOPIE AUF
	3436	# LOKALER MASCHINE ANLEGEN
	3437	if [[ $transfer_failed = true ]]
	3438	then
	3439	printf " +++ transfer failed. Trying to save a copy on the local host under:\n"
	3440	printf " ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung\n"
	3441
	3442	# ERSTMAL PRUEFEN, OB VERZEICHNIS EXISTIERT. GEGEBENENFALLS
	3443	# ANLEGEN.
	3444	eval local_catalog=${pathout[$i]}
	3445	if [[ ! -d $local_catalog ]]
	3446	then
	3447	printf " *** local directory does not exist. Trying to create:\n"
	3448	printf " $local_catalog \n"
	3449	mkdir -p $local_catalog
	3450	fi
	3451	eval cp ${localout[$i]} ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung
	3452	transfer_problems=true
	3453	fi
	3454	fi
	3455	else
	3456
	3457	# WERTZUWEISUNG, SO DASS WEITER UNTEN NUR KOPIERT WIRD
	3458	actionout[$i]=""
	3459	fi
	3460	fi
	3461
	3462
	3463	# APPEND PER FTP/SCP (IMMER IM BINAERMODUS, -M: FALLS ZIELKATALOG
	3464	# NICHT VORHANDEN, WIRD VERSUCHT, IHN ANZULEGEN), ABER NUR BEI
	3465	# REMOTE-RECHNUNGEN
	3466	if [[ "${actionout[$i]}" = tra ]]
	3467	then
	3468	if [[ $localhost != $fromhost ]]
	3469	then
	3470	if [[ $localhost = ibmh \|\| $localhost = ibmb \|\| $localhost = nech ]]
	3471	then
	3472
	3473	# TRANSFER IN EIGENSTAENDIGEM JOB
	3474	# ZUERST KOPIE DER DATEI INS TEMPORAERE DATENVERZEICHNIS
	3475	[[ ! -d $tmp_data_catalog/TRANSFER ]] && mkdir -p $tmp_data_catalog/TRANSFER
	3476	file_to_transfer=${fname}_${localout[$i]}_to_transfer_$kennung
	3477	ln -f ${localout[$i]} $tmp_data_catalog/TRANSFER/$file_to_transfer
	3478
	3479	echo "set -x" > transfer_${localout[$i]}
	3480	echo "cd $tmp_data_catalog/TRANSFER" >> transfer_${localout[$i]}
[82]	3481
	3482	printf "\n >>> OUTPUT: ${localout[$i]} append by SCP in seperate job to"
	3483	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}"
	3484	printf "\n or higher cycle\n"
	3485	echo "batch_scp -A -b -m -u $return_username $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
	3486
[1]	3487	echo "[[ \$? = 0 ]] && rm $file_to_transfer" >> transfer_${localout[$i]}
	3488
	3489	if [[ $localhost = nech ]]
	3490	then
[82]	3491	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 900 transfer_${localout[$i]}
[1]	3492	else
	3493	if [[ $LOGNAME = b323013 ]]
	3494	then
[164]	3495	subjob -v -q c1 -X 0 -m 1000 -t 900 -c $job_catalog transfer_${localout[$i]}
[1]	3496	else
[164]	3497	subjob -d -v -q c1 -X 0 -m 1000 -t 900 -c $job_catalog transfer_${localout[$i]}
[1]	3498	fi
	3499	fi
	3500
	3501	else
	3502
	3503	# TRANSFER INNERHALB DIESES JOBS
	3504	transfer_failed=false
[82]	3505	printf "\n >>> OUTPUT: ${localout[$i]} append by SCP to"
	3506	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}\n"
	3507	batch_scp -A -b -m -u $return_username $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
	3508	[[ $? != 0 ]] && transfer_failed=true
[1]	3509
	3510	# BEI FEHLGESCHLAGENEM TRANSFER SICHERUNGSKOPIE AUF
	3511	# LOKALER MASCHINE ANLEGEN
	3512	if [[ $transfer_failed = true ]]
	3513	then
	3514	printf " +++ transfer failed. Trying to save a copy on the local host under:\n"
	3515	printf " ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung\n"
	3516
	3517	# ERSTMAL PRUEFEN, OB VERZEICHNIS EXISTIERT. GEGEBENENFALLS
	3518	# ANLEGEN
	3519	eval local_catalog=${pathout[$i]}
	3520	if [[ ! -d $local_catalog ]]
	3521	then
	3522	printf " *** local directory does not exist. Trying to create:\n"
	3523	printf " $local_catalog \n"
	3524	mkdir -p $local_catalog
	3525	fi
	3526
	3527	eval cp ${localout[$i]} ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung
	3528	transfer_problems=true
	3529	fi
	3530	fi
	3531	else
	3532
	3533	# WERTZUWEISUNG, SO DASS WEITER UNTEN NUR APPEND AUF
	3534	# LOKALER MASCHINE DURCHGEFUEHRT WIRD
	3535	actionout[$i]=a
	3536	fi
	3537	fi
	3538
	3539
	3540	# OUTPUT-DATEI FUER EINEN FORTSETZUNGSLAUF. DATEI WIRD PER
	3541	# LINK AUF DEN TEMPORAEREN DATENKATALOG GELEGT. OPTION -f WIRD
	3542	# VERWENDET, FALLS DORT NOCH EINE DATEI GLEICHEN NAMENS VORHANDEN
	3543	# SEIN SOLLTE. ANSCHLIESSEND WIRD SEINE ARCHIVIERUNG ANGESTOSSEN
	3544	if [[ "${actionout[$i]}" = fl ]]
	3545	then
	3546	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
	3547	chmod g+rx $tmp_data_catalog
	3548	if [[ $files_for_pes = false ]]
	3549	then
	3550	printf "\n >>> OUTPUT: ${localout[$i]} to"
	3551	printf "\n $tmp_data_catalog/${frelout[$i]} (temporary data catalog)\n"
	3552	ln -f ${localout[$i]} $tmp_data_catalog/${frelout[$i]}
	3553	else
	3554	printf "\n >>> OUTPUT: ${localout[$i]}/.... to"
	3555	printf "\n $tmp_data_catalog/${frelout[$i]} (temporary data catalog)\n"
	3556	mkdir $tmp_data_catalog/${frelout[$i]}
[149]	3557	cd ${localout[$i]}
	3558	for file in $(ls *)
	3559	do
	3560	ln -f $file $tmp_data_catalog/${frelout[$i]}
	3561	done
	3562	cd $TEMPDIR
[1]	3563	fi
	3564
	3565
	3566	# ARCHIVIERUNGSJOB WIRD ERZEUGT UND ABGESCHICKT
	3567	if [[ $store_on_archive_system = true ]]
	3568	then
	3569
	3570	if [[ $archive_system = asterix ]]
	3571	then
	3572	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
	3573	if [[ $files_for_pes = false ]]
	3574	then
	3575	echo "stageout ${frelout[$i]} > STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
	3576	else
	3577	echo "stageout -t ${frelout[$i]} > STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
	3578	fi
	3579	echo "cat STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
	3580	echo "if [[ \$(grep -c \"st.msg:150\" STAGE_OUTPUT${i}_$kennung) != 0 ]]" >> archive_${frelout[$i]}
	3581	echo "then" >> archive_${frelout[$i]}
	3582	echo " do_stageout=false" >> archive_${frelout[$i]}
	3583	echo "else" >> archive_${frelout[$i]}
	3584	echo " echo \" +++ $filetyp ${frelout[$i]} could not be stored on archive-system\" " >> archive_${frelout[$i]}
	3585	echo " cat /dev/null > ~/job_queue/ARCHIVE_ERROR_$fname" >> archive_${frelout[$i]}
	3586	echo " cat STAGE_OUTPUT${i}_$kennung > ~/job_queue/archive_${frelout[$i]}_error" >> archive_${frelout[$i]}
	3587	echo " echo \" *** $filetyp ${frelout[$i]} will be copied to \$WORK as backup\" " >> archive_${frelout[$i]}
	3588	if [[ $files_for_pes = false ]]
	3589	then
	3590	echo " cp ${frelout[$i]} \$WORK" >> archive_${frelout[$i]}
	3591	else
	3592	echo " cp -r ${frelout[$i]} \$WORK/${frelout[$i]}" >> archive_${frelout[$i]}
	3593	fi
	3594	echo " echo \" *** $filetyp ${frelout[$i]} saved\" " >> archive_${frelout[$i]}
	3595	echo "fi" >> archive_${frelout[$i]}
	3596	echo "rm STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
	3597	elif [[ $archive_system = DMF ]]
	3598	then
	3599	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
	3600	if [[ $files_for_pes = false ]]
	3601	then
	3602	printf "\n +++ archiving of single files impossible with $archive_system !\n"
	3603	locat=DMF
	3604	exit
	3605	else
	3606	# FUER RECHNER IN JUELICH. DORT KOENNTEN AUCH
	3607	# EINZELNE DATEIEN GESICHERT WERDEN (SPAETER KORR.)
	3608	echo "rm -rf \$ARCHIVE/${frelout[$i]}" >> archive_${frelout[$i]}
	3609	echo "cp -r ${frelout[$i]} \$ARCHIVE" >> archive_${frelout[$i]}
	3610	fi
	3611	elif [[ $archive_system = tivoli ]]
	3612	then
	3613	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
	3614	if [[ $files_for_pes = false ]]
	3615	then
	3616	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
	3617	echo "set -x" >> archive_${frelout[$i]}
	3618	echo "rm -rf \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
	3619	echo "cp ${frelout[$i]} \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
	3620	else
	3621
	3622	echo "set -x" >> archive_${frelout[$i]}
	3623	echo "rm -rf \$PERM/${frelout[$i]}/*" >> archive_${frelout[$i]}
	3624	echo "[[ ! -d \$PERM/${frelout[$i]} ]] && mkdir $PERM/${frelout[$i]}" >> archive_${frelout[$i]}
	3625	cd $tmp_data_catalog
	3626	all_files=`ls -1 ${frelout[$i]}/*`
	3627	cd - > /dev/null
	3628	(( inode = 0 ))
	3629	(( tp1 = tasks_per_node + 1 ))
	3630	while (( inode < nodes ))
	3631	do
	3632	# echo "*** all_files = \"$all_files\" "
	3633	files=`echo $all_files \| cut -d" " -f1-$tasks_per_node`
	3634	all_files=`echo $all_files \| cut -d" " -f$tp1-`
	3635	# echo "*** tasks_per_node = \"$tasks_per_node\" "
	3636	# echo "*** files = \"$files\" "
	3637	# echo "*** all_files = \"$all_files\" "
	3638	echo "tar cvf \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar $files" >> archive_${frelout[$i]}
	3639	echo "dsmc incremental \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar" >> archive_${frelout[$i]}
	3640	echo "dsmmigrate \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar" >> archive_${frelout[$i]}
	3641	(( inode = inode + 1 ))
	3642	done
	3643	# echo "rm -rf \$PERM/${frelout[$i]}.tar" >> archive_${frelout[$i]}
	3644	# echo "tar cvf \$PERM/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
	3645	fi
	3646	elif [[ $archive_system = ut ]]
	3647	then
	3648	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
	3649	if [[ $files_for_pes = false ]]
	3650	then
	3651	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
	3652	echo "set -x" >> archive_${frelout[$i]}
	3653	echo "rm -rf \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
	3654	echo "cp ${frelout[$i]} \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
	3655	else
	3656
	3657	echo "set -x" >> archive_${frelout[$i]}
	3658	echo "rm -rf \$UT/${frelout[$i]}/*" >> archive_${frelout[$i]}
	3659	echo "[[ ! -d \$UT/${frelout[$i]} ]] && mkdir $UT/${frelout[$i]}" >> archive_${frelout[$i]}
	3660	cd $tmp_data_catalog
	3661	all_files=`ls -1 ${frelout[$i]}/*`
	3662	cd - > /dev/null
	3663	(( inode = 0 ))
	3664	(( tp1 = tasks_per_node + 1 ))
	3665	while (( inode < nodes ))
	3666	do
	3667	files=`echo $all_files \| cut -d" " -f1-$tasks_per_node`
	3668	all_files=`echo $all_files \| cut -d" " -f$tp1-`
	3669	echo "tar cvf \$UT/${frelout[$i]}/${frelout[$i]}.node_$inode.tar $files" >> archive_${frelout[$i]}
	3670	(( inode = inode + 1 ))
	3671	done
	3672	fi
	3673	elif [[ $archive_system = none ]]
	3674	then
	3675	printf " +++ archiving on $localhost not available!\n"
	3676	fi
	3677
	3678	if [[ $archive_system != none ]]
	3679	then
	3680	if [[ $localhost = ibmh \|\| $localhost = ibmb ]]
	3681	then
[164]	3682	# subjob -d -v -q cdata -X 0 -m 1000 -t 43200 -c $job_catalog archive_${frelout[$i]}
	3683	subjob -v -q cdata -X 0 -m 1000 -t 43200 -c $job_catalog archive_${frelout[$i]}
[1]	3684	elif [[ $localhost = nech ]]
	3685	then
[82]	3686	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 7200 archive_${frelout[$i]}
[1]	3687	fi
	3688	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
	3689	fi
	3690	else
	3691	printf " +++ caution: option -A is switched on. No archiving on $archive_system!\n"
	3692	fi
	3693
	3694
	3695	# LEERDATEI IM BENUTZERVERZEICHNIS ANLEGEN, DAMIT BEKANNT IST,
	3696	# WIE DIE HOECHSTE ZYKLUSNUMMER AUF DEM ARCHIV-SYSTEM LAUTET
	3697	if [[ $files_for_pes = false ]]
	3698	then
	3699	cat /dev/null > ${pathout[$i]}
	3700	else
	3701	mkdir -p ${pathout[$i]}
	3702	fi
	3703
	3704	fi
	3705
	3706
	3707	# KOPIEREN AUF LOKALER MASCHINE ZUM ARCHIV-SYSTEM
	3708	# AUSSERDEM MUSS LEERDATEI ANGELEGT WERDEN, DAMIT BEKANNT IST,
	3709	# WIE DIE HOECHSTE ZYKLUSNUMMER AUF DEM ARCHIV-SYSTEM LAUTET
	3710	# FALLS IRGENDEINE (VON MEHREREN) ARCHIVIERUNGEN SCHIEF GEHT,
	3711	# WIRD FLAG GESETZT UND BLEIBT AUCH BEI WEITEREN ORDNUNGS-
	3712	# GEMAESSEN ARCHIVIERUNGEN GESETZT
	3713	if [[ "${actionout[$i]}" = ar ]]
	3714	then
	3715	if [[ $files_for_pes = false ]]
	3716	then
	3717	printf "\n >>> OUTPUT: ${localout[$i]} to"
	3718	printf "\n ${pathout[$i]}"
	3719	printf "\n File will be copied to archive-system ($archive_system) !\n"
	3720	else
	3721	printf "\n >>> OUTPUT: ${localout[$i]}/_.... to"
	3722	printf "\n ${pathout[$i]}"
	3723	printf "\n Directory will be copied to archive-system ($archive_system) !\n"
	3724	fi
	3725	mv ${localout[$i]} ${frelout[$i]}
	3726
	3727	file_saved=false
	3728
	3729	if [[ $archive_system = asterix ]]
	3730	then
	3731	do_stageout=true
	3732	(( stageout_anz = 0 ))
	3733	while [[ $do_stageout = true ]]
	3734	do
	3735	if [[ $files_for_pes = false ]]
	3736	then
	3737	stageout ${frelout[$i]} > STAGE_OUTPUT
	3738	else
	3739	stageout -t ${frelout[$i]} > STAGE_OUTPUT
	3740	fi
	3741	cat STAGE_OUTPUT
	3742	if [[ $(grep -c "st.msg:150" STAGE_OUTPUT) != 0 ]]
	3743	then
	3744	file_saved=true
	3745	do_stageout=false
	3746	else
	3747	if [[ $files_for_pes = false ]]
	3748	then
	3749	printf "\n +++ file ${frelout[$i]} could not be saved on archive-system"
	3750	else
	3751	printf "\n +++ directory ${frelout[$i]} could not be saved on archive-system"
	3752	fi
	3753	(( stageout_anz = stageout_anz + 1 ))
	3754	if (( stageout_anz == 10 ))
	3755	then
	3756	printf "\n +++ stoped after 10 unsuccessful tries!"
	3757	archive_save=false
	3758	do_stageout=false
	3759	else
	3760	printf "\n *** new try to store on archive after 15 min:"
	3761	sleep 900
	3762	fi
	3763	fi
	3764	done
	3765	elif [[ $archive_system = DMF ]]
	3766	then
	3767	if [[ $files_for_pes = false ]]
	3768	then
	3769	printf "\n +++ archiving of single files impossible on $archive_system!\n"
	3770	locat=DMF
	3771	exit
	3772	else
	3773	rm -rf $ARCHIVE/${frelout[$i]}
	3774	cp -r ${frelout[$i]} $ARCHIVE
	3775	fi
	3776	file_saved=true
	3777	elif [[ $archive_system = tivoli ]]
	3778	then
	3779	# ARCHIVIERUNG NUR PER BATCH-JOB MOEGLICH
	3780	# DATEI MUSS ZWISCHENZEITLICH INS TEMPORAERE DATENVERZEICHNIS
	3781	# GELEGT WERDEN
	3782	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
	3783	chmod g+rx $tmp_data_catalog
	3784	if [[ $files_for_pes = false ]]
	3785	then
	3786	ln -f ${frelout[$i]} $tmp_data_catalog/${frelout[$i]}
	3787	else
	3788	mkdir $tmp_data_catalog/${frelout[$i]}
	3789	ln -f ${frelout[$i]}/* $tmp_data_catalog/${frelout[$i]}
	3790	fi
	3791
	3792	# BATCH JOB GENERIEREN UND ABSCHICKEN; DATEI MUSS WIEDER
	3793	# AUS TEMPORAEREM DATENVERZEICHNIS ENTFERNT WERDEN
	3794	echo "cd $tmp_data_catalog" > archive_${frelout[$i]}
	3795	if [[ $files_for_pes = false ]]
	3796	then
	3797	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
	3798	echo "rm -rf \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
	3799	echo "cp ${frelout[$i]} \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
	3800	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
	3801	else
	3802	echo "rm -rf \$PERM/${frelout[$i]}.tar" >> archive_${frelout[$i]}
	3803	echo "tar cvf \$PERM/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
	3804	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
	3805	fi
	3806
[164]	3807	subjob -v -d -q cdata -X 0 -m 1000 -t 43200 -c $job_catalog archive_${frelout[$i]}
[1]	3808	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
	3809	file_saved=true
	3810
	3811	elif [[ $archive_system = ut ]]
	3812	then
	3813	# ARCHIVIERUNG NUR PER BATCH-JOB MOEGLICH
	3814	# DATEI MUSS ZWISCHENZEITLICH INS TEMPORAERE DATENVERZEICHNIS
	3815	# GELEGT WERDEN
	3816	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
	3817	chmod g+rx $tmp_data_catalog
	3818	if [[ $files_for_pes = false ]]
	3819	then
	3820	ln -f ${frelout[$i]} $tmp_data_catalog/${frelout[$i]}
	3821	else
	3822	mkdir $tmp_data_catalog/${frelout[$i]}
	3823	ln -f ${frelout[$i]}/* $tmp_data_catalog/${frelout[$i]}
	3824	fi
	3825
	3826	# BATCH JOB GENERIEREN UND ABSCHICKEN; DATEI MUSS WIEDER
	3827	# AUS TEMPORAEREM DATENVERZEICHNIS ENTFERNT WERDEN
	3828	echo "cd $tmp_data_catalog" > archive_${frelout[$i]}
	3829	if [[ $files_for_pes = false ]]
	3830	then
	3831	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
	3832	echo "rm -rf \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
	3833	echo "cp ${frelout[$i]} \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
	3834	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
	3835	else
	3836	echo "rm -rf \$UT/${frelout[$i]}.tar" >> archive_${frelout[$i]}
	3837	echo "tar cvf \$UT/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
	3838	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
	3839	fi
	3840
[82]	3841	subjob -v -c /pf/b/$usern/job_queue -d -q pp -X 0 -m 1000 -t 7200 archive_${frelout[$i]}
[1]	3842	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
	3843	file_saved=true
	3844
	3845	else
	3846	printf "\n +++ archive_system=\"$archive_system\" archiving impossible!"
	3847	archive_save=false
	3848	fi
	3849	if [[ $file_saved = true ]]
	3850	then
	3851	if [[ $files_for_pes = false ]]
	3852	then
	3853	cat /dev/null > ${pathout[$i]}
	3854	else
	3855	mkdir -p ${pathout[$i]}
	3856	fi
	3857	fi
	3858	fi
	3859
	3860	# APPEND AUF LOKALER MASCHINE
	3861	if [[ "${actionout[$i]}" = "a" ]]
	3862	then
	3863	printf "\n >>> OUTPUT: ${localout[$i]} append to ${pathout[$i]}\n"
	3864	cat ${localout[$i]} >> ${pathout[$i]}
	3865	fi
	3866
	3867	# KOPIEREN AUF LOKALER MASCHINE
	3868	# ES MUSS KOPIERT WERDEN, DA MOVE NICHT UEBER FILESYSTEM HINAUS MOEGLICH
	3869	if [[ "${actionout[$i]}" = "" && $files_for_pes = false ]]
	3870	then
	3871
	3872	# KOPIEREN AUF EINPROZESSORMASCHINE
[5]	3873	if [[ "${extout[$i]}" != " " && "${extout[$i]}" != "" ]]
[1]	3874	then
	3875	printf "\n >>> OUTPUT: ${localout[$i]} to ${pathout[$i]}.${extout[$i]}\n"
[149]	3876	if [[ $link_local_output = true ]]
	3877	then
	3878	printf " using ln -f\n"
	3879	ln -f ${localout[$i]} ${pathout[$i]}.${extout[$i]}
	3880	fi
	3881	# If "ln -f" fails of if "$link_local_output = false" do a normal "cp"
	3882	if [[ ! -f "${pathout[$i]}.${extout[$i]}" ]]
	3883	then
	3884	if [[ $link_local_output = true ]]
	3885	then
	3886	printf " ln failed, using cp...\n"
	3887	fi
	3888	cp ${localout[$i]} ${pathout[$i]}.${extout[$i]}
	3889	fi
[1]	3890	else
	3891	printf "\n >>> OUTPUT: ${localout[$i]} to ${pathout[$i]}\n"
[149]	3892	if [[ $link_local_output = true ]]
	3893	then
	3894	printf " using ln -f\n"
	3895	ln -f ${localout[$i]} ${pathout[$i]}
	3896	fi
	3897	# If "ln -f" fails of if "$link_local_output = false" do a normal "cp"
	3898	if [[ ! -f "${pathout[$i]}" ]]
	3899	then
	3900	if [[ $link_local_output = true ]]
	3901	then
	3902	printf " ln failed, using cp...\n"
	3903	fi
	3904	cp ${localout[$i]} ${pathout[$i]}
	3905	fi
[1]	3906	fi
	3907
	3908	elif [[ "${actionout[$i]}" = "" && $files_for_pes = true ]]
	3909	then
	3910
	3911	# DIE DEN PROZESSOREN EINES PARALLELRECHNERS ZUGEHOERIGEN
	3912	# DATEIEN WERDEN ERST IN EINEM KATALOG GESAMMELT UND DIESER
	3913	# WIRD DANN KOPIERT
	3914	# PER MOVE UMBENANNT WERDEN
	3915	printf "\n >>> OUTPUT: ${localout[$i]}/_.... to ${pathout[$i]}\n"
[149]	3916	if [[ $link_local_output = true ]]
	3917	then
	3918	printf " using ln -f\n"
	3919	mkdir ${pathout[$i]}
	3920	cd ${localout[$i]}
	3921	for file in $(ls *)
	3922	do
	3923	ln -f $file ${pathout[$i]}
	3924	done
	3925	cd $TEMPDIR
	3926	fi
	3927	# If "ln -f" fails of if "$link_local_output = false" do a normal "cp -r"
	3928	if [[ ! -f "${pathout[$i]}/_0000" ]]
	3929	then
	3930	if [[ $link_local_output = true ]]
	3931	then
	3932	printf " ln failed for .../_0000, using cp...\n"
	3933	fi
	3934	cp -r ${localout[$i]} ${pathout[$i]}
	3935	fi
[1]	3936
	3937	fi
	3938	fi
	3939	done
	3940	if (( i != 0 ))
	3941	then
	3942	if [[ $transfer_problems = true ]]
	3943	then
	3944	printf "\n$striche\n *** OUTPUT-files saved"
	3945	printf "\n +++ WARNING: some data transfers failed! \n"
	3946	else
	3947	printf "\n$striche\n *** all OUTPUT-files saved \n"
	3948	fi
	3949	fi
	3950
	3951
	3952	# EVENTUELL FOLGEJOB STARTEN
	3953	# DATEI CONTINUE_RUN MUSS VOM BENUTZERPROGRAMM AUS ERZEUGT WERDEN
	3954	if [[ -f CONTINUE_RUN ]]
	3955	then
	3956
	3957	if [[ $archive_save = true ]]
	3958	then
	3959
	3960	# ZUERST IN MRUN-AUFRUF OPTIONEN FUER FORTSETZUNGSLAUF, FUER
	3961	# STILLES ABARBEITEN (OHNE INTERAKTIVE RUECKFAGEN) UND FUER
	3962	# BATCH-BETRIEB (NUR WICHTIG, FALLS BATCH AUF LOKALER MASCHINE
	3963	# DURCHGEFUEHRT WERDEN SOLL) EINFUEGEN, FALLS NICHT BEREITS VOR-
	3964	# HANDEN
	3965	[[ $(echo $mc \| grep -c "\-C") = 0 ]] && mc="$mc -C"
	3966	[[ $(echo $mc \| grep -c "\-v") = 0 ]] && mc="$mc -v"
	3967	[[ $(echo $mc \| grep -c "\-b") = 0 ]] && mc="$mc -b"
	3968	if [[ $(echo $mc \| grep -c "#") != 0 ]]
	3969	then
	3970	mc=`echo $mc \| sed 's/#/f/g'`
	3971	fi
	3972
	3973
	3974	# JOB STARTEN
	3975	printf "\n\n *** initiating restart-run on \"$return_addres\" using command:\n"
	3976	echo " $mc"
	3977	printf "\n$striche\n"
	3978	if [[ $localhost != $fromhost ]]
	3979	then
	3980
[204]	3981	if [[ $localhost = lcsgih \|\| $localhost = lcsgib \|\| $localhost = nech \|\| $localhost = ibmb \|\| $localhost = ibmh \|\| $localhost = ibms \|\| $localhost = lctit ]]
[1]	3982	then
	3983	echo "*** ssh will be used to initiate restart-runs!"
	3984	echo " return_addres=\"$return_addres\" "
	3985	echo " return_username=\"$return_username\" "
	3986	if [[ $return_addres = 172.20.25.41 ]]
	3987	then
	3988	# WORKAROUND AUF SCIROCCO AM TIT
[33]	3989	print "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc " \| ssh $return_addres -l $return_username
[1]	3990	else
[33]	3991	ssh $return_addres -l $return_username "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc "
[1]	3992	fi
	3993	else
	3994	printf "\n +++ no restart mechanism available for host \"$localhost\" "
	3995	locat=restart; exit
	3996	fi
	3997
	3998	# WARTEN, DAMIT SICH RESTART JOB IN QUEUE EINREIHEN KANN, BEVOR
	3999	# DER AKTUELLE JOB ENDET
	4000	sleep 30
	4001
	4002	else
	4003
	4004	# BEI RECHNUNGEN AUF LOKALER MASCHINE KANN MRUN DIREKT AUFGE-
[108]	4005	# RUFEN WERDEN, AUSSER AUF lcfimm
[1]	4006	cd $LOCAL_PWD
[108]	4007	if [[ $localhost = lcfimm ]]
	4008	then
	4009	ssh $return_addres -l $return_username "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc "
	4010	else
	4011	eval $mc # ' MUESSEN AUSGEWERTET WERDEN
	4012	fi
[1]	4013	cd - > /dev/null
	4014	fi
	4015	printf "\n$striche\n *** restart-run initiated \n"
	4016
	4017
	4018	# EVENTUELL INPUT-DATEIEN, DIE VON TEMPORAEREM DATENVERZEICHNIS
	4019	# GEHOLT WORDEN SIND, LOESCHEN
	4020	(( i = 0 ))
	4021	while (( i < iin ))
	4022	do
	4023	(( i = i + 1 ))
	4024	if [[ "${got_tmp[$i]}" = true && $keep_data_from_previous_run = false ]]
	4025	then
	4026	rm -r $tmp_data_catalog/${frelin[$i]}
	4027	fi
	4028	done
	4029
	4030	else
	4031
	4032	printf "\n +++ no restart-run possible, since errors occured"
	4033	printf "\n during the archive process"
	4034	fi
	4035
	4036	fi
	4037
	4038
	4039
	4040	# EVTL. EMAIL-BENACHRICHTIGUNG UEBER ABGESCHLOSSENEN LAUF
	4041	if [[ "$email_notification" != "" ]]
	4042	then
	4043
	4044	if [[ $localhost != $fromhost ]]
	4045	then
	4046	if [[ -f CONTINUE_RUN ]]
	4047	then
	4048	echo "PALM restart run necessary" > email_text
	4049	echo "description header of actual run:" >> email_text
	4050	cat CONTINUE_RUN >> email_text
	4051	echo "mrun-command to restart:" >> email_text
	4052	echo "$mc" >> email_text
	4053	else
	4054	echo "PALM run with base filename \"$fname\" on host \"$localhost\" finished" > email_text
	4055	fi
	4056	mail $email_notification < email_text
	4057	printf "\n *** email notification sent to \"$email_notification\" "
	4058	fi
	4059	fi
	4060
	4061
	4062
	4063	# ALLE ARBEITEN BEENDET. TEMPORAERER KATALOG KANN GELOESCHT WERDEN
	4064	cd $HOME
	4065	[[ $delete_temporary_catalog = true ]] && rm -rf $TEMPDIR
	4066
	4067	else
	4068
	4069
	4070	# FALLS AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL, WERDEN JETZT ENTSPRE-
	4071	# CHENDE AKTIONEN DURCHGEFUEHRT
	4072
	4073	# MRUN-BEFEHL FUER REMOTE-MASCHINE ZUSAMMENSTELLEN
[82]	4074	mrun_com="$mrun_script_name -a $afname -c $config_file -d $fname -h $host -H $fromhost -m $memory -t $cpumax -q $queue -R $return_addres -U $return_username -u $remote_username"
[1]	4075	[[ "$cpp_opts" != "" ]] && mrun_com=${mrun_com}" -D \"$cpp_opts\""
[79]	4076	[[ "$global_revision" != "" ]] && mrun_com=${mrun_com}" -G \"$global_revision\""
[123]	4077	[[ $group_number != none ]] && mrun_com=${mrun_com}" -g $group_number"
[1]	4078	[[ $do_compile = true ]] && mrun_com=${mrun_com}" -s \"$source_list\""
	4079	[[ "$input_list" != "" ]] && mrun_com=${mrun_com}" -i \"$input_list\""
	4080	[[ $ignore_archive_error = true ]] && mrun_com=${mrun_com}" -I"
	4081	[[ $keep_data_from_previous_run = true ]] && mrun_com=${mrun_com}" -k"
	4082	[[ "$additional_conditions" != "" ]] && mrun_com=${mrun_com}" -K \"$additional_conditions\""
	4083	# [[ "$makefile" != "$source_path/Makefile" ]] && mrun_com=${mrun_com}" -M \"$makefile\""
	4084	[[ "$output_list" != "" ]] && mrun_com=${mrun_com}" -o \"$output_list\""
	4085	[[ "$read_from_config" = false ]] && mrun_com=${mrun_com}" -S"
	4086	[[ $do_trace = true ]] && mrun_com=${mrun_com}" -x"
	4087	[[ "$numprocs" != "" ]] && mrun_com=${mrun_com}" -X $numprocs"
	4088	if [[ $use_openmp = true ]]
	4089	then
	4090	mrun_com=${mrun_com}" -O"
	4091	[[ "$tasks_per_node" != "" ]] && mrun_com=${mrun_com}" -T $threads_per_task"
	4092	else
	4093	[[ "$tasks_per_node" != "" ]] && mrun_com=${mrun_com}" -T $tasks_per_node"
	4094	fi
	4095	[[ $store_on_archive_system = false ]] && mrun_com=${mrun_com}" -A"
	4096	[[ $package_list != "" ]] && mrun_com=${mrun_com}" -p \"$package_list\""
	4097	[[ $return_password != "" ]] && mrun_com=${mrun_com}" -P $return_password"
	4098	[[ $delete_temporary_catalog = false ]] && mrun_com=${mrun_com}" -B"
[127]	4099	[[ $node_usage != default && "$(echo $node_usage \| cut -c1-3)" != "sla" && $node_usage != novice ]] && mrun_com=${mrun_com}" -n $node_usage"
[206]	4100	[[ $run_coupled_model = true ]] && mrun_com=${mrun_com}" -Y \"$coupled_dist\""
[1]	4101	if [[ $do_remote = true ]]
	4102	then
	4103	printf "\n>>>> MRUN-command on execution host:\n>>>> $mrun_com \n"
	4104	fi
	4105
	4106
	4107	# ZUSAMMENSTELLUNG DES JOBSCRIPTS AUF DATEI jobfile
	4108	jobfile=jobfile.$RANDOM
	4109
	4110
	4111	# TEMPORAERES VERZEICHNIS GENERIEREN UND NACH DORT WECHSELN
	4112	echo "mkdir $TEMPDIR" >> $jobfile
	4113	echo "cd $TEMPDIR" >> $jobfile
	4114
	4115
	4116	# EVENTUELL FEHLERVERFOLGUNG AKTIVIEREN
	4117	if [[ $do_trace = true ]]
	4118	then
	4119	echo "set -x" >> $jobfile
	4120	else
	4121	echo "set +vx" >> $jobfile
	4122	fi
	4123
	4124
[191]	4125	# BEREITSTELLUNG VON QUELLTEXTEN, MRUN-SCRIPTS UND KONFIGURATIONS-
	4126	# DATEI FUER DEN JOB
	4127	if [[ $( echo $host \| cut -c1-5 ) = lcsgi ]]
[1]	4128	then
	4129
[191]	4130	# KONFIGURATIONSDATEI UND MRUN_SCRIPT IN DAS SOURCE-VERZEICHNIS
	4131	# KOPIEREN
	4132	if [[ $restart_run != true ]]
	4133	then
	4134	cp $config_file $working_directory/SOURCES_FOR_RUN_$fname
	4135	cp ${PALM_BIN}/$mrun_script_name $working_directory/SOURCES_FOR_RUN_$fname
	4136	fi
[1]	4137
[191]	4138	# SOURCE-VERZEICHNIS VOM LOKALEN RECHNER PER SCP TRANSFERIEREN
[193]	4139	echo "set -x" >> $jobfile
	4140	echo "scp -r $return_username@$return_addres:$working_directory/SOURCES_FOR_RUN_$fname ." >> $jobfile
	4141	echo "export SOURCES_COMPLETE=true" >> $jobfile
[1]	4142
[193]	4143	# QUELLTEXTE, MRUN-SCRIPT UND KONFIGURATIONSDATEI IN DAS AKTUELLE
	4144	# ARBEITSVERZEICHNIS VERSCHIEBEN
	4145	echo "mv SOURCES_FOR_RUN_$fname/$config_file . " >> $jobfile
	4146	echo "mv SOURCES_FOR_RUN_$fname/$mrun_script_name . " >> $jobfile
	4147	echo "execute_mrun=true" >> $jobfile
	4148	echo " " >> $jobfile
	4149
[191]	4150	else
	4151
	4152	# ABSPEICHERN DER QUELLTEXTE (NUR FALLS UEBERSETZT WERDEN SOLL)
	4153	# SOWIE GEGEBENENFALLS DES MAKEFILES
	4154	if [[ $do_compile = true ]]
	4155	then
	4156
	4157	source_catalog=SOURCES_FOR_RUN_$fname
	4158
	4159	# UNTERVERZEICHNIS FUER QUELLTEXTE UND MAKEFILE ANLEGEN
	4160	# MRUN WIRD DIESES VRZEICHNIS UEBER ENVIRONMENT VARIABLE
	4161	# MITGETEILT (UEBERSTEUERT ANGABE IN KONFIGURATIONSDATEI)
	4162	echo "mkdir SOURCES_FOR_RUN_$fname" >> $jobfile
	4163	echo "export SOURCES_COMPLETE=true" >> $jobfile
	4164	echo "cd SOURCES_FOR_RUN_$fname" >> $jobfile
	4165
	4166	for filename in $source_list
	4167	do
	4168	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
	4169	echo "cat > $filename << \"%END%\"" >> $jobfile
	4170	cat $source_catalog/$filename >> $jobfile
	4171	echo " " >> $jobfile
	4172	echo "%END%" >> $jobfile
	4173	echo " " >> $jobfile
	4174	done
	4175
[1]	4176	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
[191]	4177	echo "cat > Makefile << \"%END%\"" >> $jobfile
	4178	cat $source_catalog/Makefile >> $jobfile
[1]	4179	echo " " >> $jobfile
	4180	echo "%END%" >> $jobfile
	4181	echo " " >> $jobfile
	4182
[191]	4183	echo "cd - > /dev/null" >> $jobfile
[1]	4184
[191]	4185	fi
[1]	4186
	4187
[191]	4188	# ABSPEICHERN DER KONFIGURATIONSDATEI
	4189	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
	4190	echo "cat > $config_file << \"%END%\"" >> $jobfile
	4191	cat $config_file >> $jobfile
	4192	echo "%END%" >> $jobfile
	4193	echo " " >> $jobfile
[1]	4194
	4195
[191]	4196	# ABSPEICHERN DER AKTUELLEN MRUN-VERSION
	4197	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
	4198	echo "cat > $mrun_script_name <<\"%END%\"" >> $jobfile
	4199	cat ${PALM_BIN}/$mrun_script_name >> $jobfile
	4200	echo "%END%" >> $jobfile
	4201	if [[ $host = lctit ]]
	4202	then
	4203	echo "sed 's/bin\/ksh/home2\/usr5\/mkanda\/pub\/ksh/' < $mrun_script_name > mrun_new" >> $jobfile
	4204	echo "mv mrun_new $mrun_script_name" >> $jobfile
	4205	fi
	4206	echo "chmod u+x $mrun_script_name" >> $jobfile
	4207	echo "execute_mrun=true" >> $jobfile
	4208	echo " " >> $jobfile
[1]	4209
	4210	fi
	4211
[191]	4212
[1]	4213	# EVTL. BENOETIGTE INPUT-DATEIEN PER FTP HOLEN ODER DEM JOB DIREKT
	4214	# MITGEBEN UND AUF DEM REMOTE-RECHNER IM BENUTZERVERZEICHNIS ABLEGEN
	4215	# FALLS DIESES NICHT EXISTIERT, WIRD VERSUCHT, DAS JEWEILS LETZTE
	4216	# UNTERVERZEICHNIS DES PFADNAMENS ANZULEGEN
	4217	if [[ $do_remote = true ]]
	4218	then
	4219	(( i = 0 ))
	4220	while (( i < iin ))
	4221	do
	4222	(( i = i + 1 ))
	4223	echo "[[ ! -d ${pathin[$i]} ]] && mkdir -p ${pathin[$i]}" >> $jobfile
	4224	if [[ "${transin[$i]}" = job ]]
	4225	then
	4226	echo "cat > ${remotepathin[$i]} <<\"%END%\"" >> $jobfile
	4227	eval cat ${pathin[$i]}/${frelin[$i]} >> $jobfile
	4228	echo " " >> $jobfile
	4229	echo "%END%" >> $jobfile
	4230	else
[82]	4231	echo "batch_scp -b -o -g -s -u $return_username $return_addres ${remotepathin[$i]} \"${pathin[$i]}\" ${frelin[$i]}" >> $jobfile
[1]	4232	fi
	4233
	4234	# UEBERPRUEFEN, OB DATEI ANGELEGT WERDEN KONNTE
	4235	echo "if [[ \$? = 1 ]]" >> $jobfile
	4236	echo "then" >> $jobfile
	4237	echo " echo \" \" " >> $jobfile
	4238	echo " echo \"+++ file ${remotepathin[$i]} could not be created\" " >> $jobfile
	4239	echo " echo \" please check, if directory exists on $host!\" " >> $jobfile
	4240	echo " echo \"+++ MRUN will not be continued\" " >> $jobfile
	4241	echo " execute_mrun=false" >> $jobfile
	4242	echo "fi" >> $jobfile
	4243	done
	4244	fi
	4245
	4246	# ARBEITSKATALOG AUF DER LOKALEN MASCHINE FUER EVENTUELLE
	4247	# FORTSETZUNGSLAUEFE PER ENV-VARIABLE UEBERGEBEN
	4248	echo "LOCAL_PWD=$working_directory" >> $jobfile
	4249	echo "export LOCAL_PWD" >> $jobfile
	4250
	4251	# EBENSO LOKALEN MRUN-KATALOG UEBERGEBEN
[22]	4252	echo "LOCAL_MRUN_PATH=$PALM_BIN" >> $jobfile
[1]	4253	echo "export LOCAL_MRUN_PATH" >> $jobfile
	4254
[66]	4255	# WORKAROUND FUER RIAM-NEC-JOBS WEGEN PROFILE-SCHWIERIGKEITEN
[69]	4256	if [[ $localhost_realname = "gate" \|\| $localhost = lctit ]]
[66]	4257	then
	4258	echo "export PALM_BIN=$PALM_BIN" >> $jobfile
	4259	fi
[1]	4260
	4261	# MRUN AUF ZIELRECHNER AUFRUFEN
	4262	echo "set -x" >> $jobfile
	4263	echo "[[ \$execute_mrun = true ]] && ./$mrun_com" >> $jobfile
	4264
	4265	echo 'ls -al; echo `pwd`' >> $jobfile
	4266	echo "cd \$HOME" >> $jobfile
	4267	echo "rm -rf $TEMPDIR" >> $jobfile
	4268
	4269
	4270
	4271
	4272	# JOB PER SUBJOB STARTEN
	4273	if [[ $silent = false ]]
	4274	then
	4275	printf "\n "
	4276	else
	4277	printf "\n\n"
	4278	fi
	4279
[164]	4280	subjob $job_on_file -h $host -u $remote_username -g $group_number -q $queue -m $memory -N $node_usage -t $cpumax $XOPT $TOPT $OOPT -n $fname -v -c $job_catalog $jobfile
[1]	4281	rm -rf $jobfile
	4282
	4283
	4284	fi # ENDE REMOTE-TEIL
	4285
	4286
	4287
	4288	# ENDE DER PROZEDUR

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