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source: palm/trunk/SCRIPTS/mrun @ 181

Last change on this file since 181 was 181, checked in by raasch, 16 years ago
bugfixes + adjustments for SGI ICE system
Property svn:keywords set to `Id`
File size: 144.4 KB

Rev	Line
[71]	1	#!/bin/ksh
[66]	2	# mrun - Plot-Shellskript
[169]	3	# $Id: mrun 181 2008-07-30 07:07:47Z raasch $
[1]	4
	5	# Prozedur zum Starten von Modellaeufen
	6
	7	# letzte Aenderung:
	8	# 03/03/94 - Siggi - Entwicklungsbeginn
	9	# 21/03/94 - Siggi - Entwicklungsabschluss (Version 1.0)
	10	# 09/12/94 - Siggi - allexport unterbunden; statt dessen werden jetzt ein-
	11	# zelne Variable exportiert. Dies ist noetig, weil an-
	12	# sonsten irgendein Speicher ueberlaeuft und von mrun
	13	# aufgerufene Programme (z.B. stageout) mit Fehlern
	14	# abbrechen (too many arguments)
	15	# 20/06/95 - Siggi - noclobber muss explizit abgeschaltet, da jetzt
	16	# defaultmaessig im RRZN-Profile eingeschaltet
	17	# 10/06/97 - Siggi - Zusaetzliche Option -C bei cpp, damit // nicht
	18	# wegfallen
	19	# 25/04/00 - Siggi - Version 1.5
	20	# remote_addres und remote_user in return_addres bzw.
	21	# return_username umbenannt, return_username wird dem
	22	# mrun-Aufruf im Job ueber Option -U mitgegeben.
	23	# Neue Variable remote_username, die beim interaktiven
	24	# mrun-Aufruf zwingend ueber die neue Option -u oder
	25	# in der Konfigurationsdatei angegeben werden muss.
	26	# 08/02/01 - Siggi - Alle mrun-Meldungen ins englische uebersetzt,
	27	# Version 1.7
	28	# 05/05/02 - Siggi - Uebersetzungen mittels make-Mechanismus moeglich
	29	# 21/11/02 - Siggi - ENV-Variable XLFRTEOPTS wird vor Ausfuehrung auf
	30	# IBM gesetzt, um Record-Laenge der NAMELIST-Dateien,
	31	# zu bestimmen; Praeprozessoroptionen haben nun alle
	32	# die Form -Dtext=text, weil auf IBM sonst text durch
	33	# die leere Zeichenkette ersetzt wird
	34	# 01/08/03 - Siggi - Test of implementing dvrp+1PE on ibm
	35	# 07/01/04 - Siggi - additional preprocessor directive for ibm included
	36	# (-D$OMP=OMP) in order to avoid problems with
	37	# OMP_NUM_THREADS
	38	# 04/01/05 - Siggi - archiving on hanni and berni is done in separate
	39	# tar files, one for each node used
	40	# 07/01/04 - Siggi - old code for t3e, vpp and hpcs eliminated
	41	# 09/01/05 - Siggi - workaround for getting the IP address on gfdl3
	42	# 17/01/05 - Siggi - job for data transfer to local machine now within
	43	# job class c1 (HLRN)
	44	# 27/01/05 - Siggi - IP address workaround for gfdl3 removed
	45	# 28/01/05 - Siggi - tar-filenames on $PERM (HLRN) now include the
	46	# base filename and cycle number
	47	# 16/02/05 - Gerald - hababai validated
	48	# 14/03/05 - Siggi - abort on NEC after first runtime error (F_ERRCNT)
	49	# 29/03/05 - Marcus - berni*-en0 validated
	50	# 21/04/05 - Siggi - transfer-job-protocol for avs-data is no more stored
	51	# 24/04/05 - Siggi - netcdf support on lcmuk
	52	# 25/04/05 - Siggi - netcdf support on gfld3 (decalpha)
	53	# 11/05/05 - Siggi - files with non-numeric extensions (.xxx after cycle
	54	# number) can now be used within interactive runs
	55	# 12/05/05 - Siggi - netcdf support on ibm
	56	# 13/05/05 - Siggi - error in tar-filenames on $PERM (HLRN) removed
	57	# 18/05/05 - Siggi - netcdf support on nec
	58	# 24/05/05 - Siggi - netcdf support on ibms
	59	# 14/06/05 - Siggi - sleep interval after submit of restart job increased
	60	# to 30 seconds
	61	# 28/06/05 - Siggi - bora adjusted to new intel compiler (LD_LIBRARY_
	62	# PATH is temporarily set)
	63	# 07/09/05 - Siggi - setting of MP_EAGER_LIMIT switched off because it
	64	# caused warnings in the job protocol
	65	# 20/10/05 - Siggi - update of netcdf-version on decalpha (gfdl3)
	66	# 25/10/05 - Siggi - error in listing files for getting the cycle number
	67	# removed
	68	# 26/10/05 - Siggi - new paths for dvrp-library, transfer of catalogs
	69	# realized by file attribute trpe
	70	# 28/10/05 - Siggi - if existing, the file extension is output in case
	71	# of missing input file - no job abort in case of
	72	# missing input files with file extensions
	73	# (preliminary solution)
	74	# 31/10/05 - Siggi - data transfer from nech now within seperate job
	75	# 04/11/05 - Siggi - netcdf 3.6.0-p1 on ibmh/ibmb
	76	# 07/12/05 - Siggi - gallego and elephanta admitted
	77	# 30/12/05 - Siggi - gfdl5 (ibmy) admitted
	78	# 10/01/06 - Siggi - cpp directive for NetCDF 64bit support
	79	# 20/01/06 - Siggi - cpp directive for ibmy
	80	# 09/02/06 - Siggi - ibmy admitted for batch mode
	81	# 13/04/06 - Siggi - ostria admitted
	82	# 18/04/06 - Siggi - usage of OpenMP implemented (additional option -O)
	83	# 10/05/06 - Siggi - environment variable XLSMPOPTS set on IBM for
	84	# optimization of OpenMP runs (option stacksize is
	85	# necessary for large gridpoint numbers because
	86	# otherwise a segmentation fault occurs)
	87	# 23/05/05 - Siggi - lctit (SUN Fire X4600) admitted
	88	# 21/08/06 - Siggi - standard mrun path on scirocco is as on bora
	89	# 23/08/06 - Siggi - netcdf support for scirocco (notebook)
	90	# 20/09/06 - Marcus - add DVRP library on nech
	91	# 24/10/06 - Siggi - Environment variables for PALM steering are written
	92	# on local NAMELIST file ENVPAR
	93	# 24/11/06 - Siggi - levanto admitted, maestro switched to ifc 9.1
	94	# 28/11/06 - Siggi - call to interpret_config.x_levanto because of SuSe 10
	95	# 06/02/07 - Siggi - add DVRP library on lcmuk
	96	# 07/02/07 - Siggi - revision of source code handling, source code is
	97	# now expected in directory given by source_path and
	98	# not in the current working directory, source code
	99	# files provided in add_source_path are allways
	100	# compiled, source code to be compiled is allways
	101	# sampled in SOURCES_FOR_RUN_$fname which is a
	102	# subdirectory of the current working directory,
[5]	103	# -s TEST changed to -s WRITE_PERMIT or -s WP,
[1]	104	# adapted for RIAM (neck)
[5]	105	# bugfix for cycle number of output file (extout)
	106	# all hpmuk-related code removed
[14]	107	# 14/02/07 - Siggi - dvrp support for neck added
[21]	108	# 28/02/07 - Siggi - empty lines in configuration file are accepted
[26]	109	# mrun_path replaced by PALM_BIN,
	110	# all machines are calling interpret_config.x
[66]	111	# 14/03/07 - Siggi - fimm admitted, revision number added to terminal
	112	# output
[69]	113	# 16/03/07 - Siggi - adjustments for lctit
[78]	114	# 29/03/07 - Siggi - global revision transfered to batch job by new
	115	# option -G
[82]	116	# 30/03/07 - Siggi - compilation "by hand" removed, cpp-directives/options
	117	# + netcdf/dvrp-options are read from configuration
	118	# file, host identifier (local_host) is read from
	119	# config file, code related to ftp filetransfer
	120	# removed (incl. option -f)
[97]	121	# 19/06/07 - Siggi - time limit for cdata jobs increased
[102]	122	# 25/07/07 - Siggi - two sets of executables can be started on lcmuk,
	123	# if new option -Y (coupling) is given,
	124	# output of executables to aout_output removed,
	125	# messages are immediately written to stdout instead
[108]	126	# 03/08/07 - Marcus - add XOPT="-X $numprocs" for lcfimm
	127	# 09/08/07 - Marcus - workaround on lcfimm to propagate environment
	128	# variables out to the nodes in coupled mode -disabled-
	129	# 13/08/07 - Marcus - start local restart jobs per ssh on lcfimm
[109]	130	# 28/08/07 - Marcus - completely remove workaround on lcfimm to propagate
	131	# environment variables out to the nodes in coupled mode
[118]	132	# 15/10/07 - Siggi - Preliminary adjustments for lctit, based on Jin's
	133	# suggestions
[122]	134	# 19/10/07 - Marcus - further adjustments for lctit: add new optional
	135	# argument -g group_number, admit all sla* node_usage
	136	# queues
[129]	137	# 30/10/07 - Marcus - further adjustments for queues on lctit
[149]	138	# 14/02/08 - Bjoern - link of restart files with long file name possible
	139	# 28/02/08 - Marcus - If environment variable link_local_output is set to
	140	# true, mrun tries "ln -f" on local output and resorts
	141	# to "cp" or "cp -r" on error
[164]	142	# 15/04/08 - Siggi - argument -c introduced to most of the subjob calls,
	143	# which allows the user to choose his own job catalog
	144	# by setting job_catalog in the configuration file
	145	# (default is ~/job_queue),
[172]	146	# workaround for mpiexec with -env option,
[164]	147	# adjustments for lcxt4 (Bergen Center for Computational
	148	# Science)
[180]	149	# 27/05/08 - Siggi - PATH is set to PALM_BIN everywhere (missing so far)
[179]	150	# 14/07/08 - Siggi - adjustments for lcsgih
[180]	151
[1]	152
	153	# VARIABLENVEREINBARUNGEN + DEFAULTWERTE
	154
	155	set +o allexport # SICHERHEITSHALBER UNTERBINDEN, DA SONST EVTL. STAGEOUT
	156	# NICHT LAUEFT (TOO MANY ARGUMENTS - PROBLEM)
	157	set +o noclobber # EXISTIERENDE DATEIEN DUERFEN UEBERSCHRIEBEN WERDEN
	158
	159	AddFilenames=""
	160	additional_conditions=""
	161	add_source_path=""
	162	afname=""
	163	archive_save=true
	164	archive_system=none
	165	compiler_name=""
	166	cond1=""
	167	cond2=""
	168	config_file=.mrun.config
	169	cpp_opts=""
[82]	170	cpp_options=""
[1]	171	cpumax=0
	172	cpurest=0
	173	delete_temporary_catalog=true
	174	do_batch=false
	175	do_compile=true
	176	do_remote=false
	177	do_stagein=true
	178	do_stageout=true
	179	do_trace=false
	180	email_notification=""
	181	exclude=""
	182	executable=""
	183	execution_error=false
[67]	184	fimm=false
[1]	185	fname=test
	186	fromhost=""
[78]	187	global_revision=""
[122]	188	group_number=none
[1]	189	host=""
	190	host_file=""
	191	hp=""
	192	ignore_archive_error=false
	193	input_list=""
	194	interpreted_config_file=""
[164]	195	job_catalog="~/job_queue"
[1]	196	job_on_file=""
	197	keep_data_from_previous_run=false
[149]	198	link_local_output=false
[1]	199	localhost_realname=$(hostname)
	200	local_compile=false
	201	locat=normal
	202	mainprog=""
	203	makefile=""
	204	mc=$0
	205	while [[ $(echo $mc \| grep -c "/") != 0 ]]
	206	do
	207	mc=`echo $mc \| cut -f2- -d"/"`
	208	done
	209	module_files=""
	210	mrun_script_name=$mc
[82]	211	netcdf_inc=""
	212	netcdf_lib=""
[1]	213	netcdf_support=false
	214	node_usage=default
	215	numprocs=""
	216	OOPT=""
	217	openmp=false
	218	output_list=""
	219	package_list=""
	220	punkte="..........................................................."
	221	queue=none
	222	read_from_config=""
[5]	223	restart_run=false
[146]	224	return_addres=$(nslookup `hostname` 2>&1 \| grep "Address:" \| tail -1 \| awk '{print $2}')
[1]	225	if [[ $return_addres = 130.75.105.158 ]]
	226	then
	227	return_addres=172.20.25.41
	228	echo "+++ WARNING: return_addres changed to $return_addres !!!!!"
	229	fi
	230	# if [[ $return_addres = 210.117.65.1 ]]
	231	# if [[ $(nslookup `hostname` 2>&1 \| grep -c 210.117.65.1) = 1 ]]
	232	# then
	233	# [[ $localhost_realname = gfdl3.yonsei.ac.kr ]] && return_addres=165.132.26.56
	234	# fi
	235	return_password=""
	236	return_username=$LOGNAME
	237	remotecall=false
	238	remote_username=""
[102]	239	run_coupled_model=false
[1]	240	run_mode=""
	241	scirocco=false
	242	store_on_archive_system=true
	243	striche=" ----------------------------------------------------------------------------"
	244	silent=false
	245	source_list=""
	246	source_path=SOURCE
	247	tasks_per_node=""
	248	threads_per_task=1
	249	tmpcreate=false
	250	tmp_data_catalog=""
	251	transfer_problems=false
	252	usern=$LOGNAME
	253	working_directory=`pwd`
	254	TOPT=""
	255	XOPT=""
	256	zeit=$( date \| cut -c 12-19 )
	257
	258	typeset -i iec=0 iic=0 iin=0 ioc=0 iout=0 memory=0 stagein_anz=0 stageout_anz=0
[102]	259	typeset -i cputime i ii iii icycle inode ival jobges jobsek maxcycle minuten nodes pes sekunden tp1
[1]	260
[66]	261	typeset -R30 calltime
[1]	262	typeset -L20 spalte1
	263	typeset -L40 spalte2
	264	typeset -L60 spalte3
	265	typeset -L35 string1=`date`
	266	typeset -L12 string2=$usern
	267	typeset -L12 string3=$localhost_realname
	268	typeset -L12 string4
	269	typeset -L12 string5
[169]	270	typeset -L30 version="MRUN 2.0 Rev$Rev: 164 $"
[1]	271
	272
	273
	274	# EINZELNE VARIABLE FUER HAUPTPROGRAMM EXPORTIEREN
	275	export cpurest fname host localhost return_addres return_username remotecall tasks_per_node
	276
	277	# FOLGENDE VARIABLEN MUESSEN FUER DIE INTERPRETATION DER KONFIGURATIONSDATEI
	278	# EXPORTIERT WERDEN
	279	export afname config_file cpp_opts cpumax do_batch do_trace fname fromhost
[127]	280	export group_number input_list memory numprocs output_list queue run_mode
[1]	281
	282
	283
	284	# FEHLERBEHANDLUNG
	285	# BEI EXIT:
[83]	286	trap 'rm -rf $working_directory/tmp_mrun
[69]	287	if [[ $locat != localhost ]]
[1]	288	then
[22]	289	# if [[ ! -f ${mrun_path}/statistik/mrun_statistik ]]
	290	# then
	291	# cat > ${mrun_path}/statistik/mrun_statistik << %STATEND%
	292	#MRUN-calls on $localhost
	293	#
	294	#date and time user localhost remotehost termination mrun-command
	295	#--------------------------------------------------------------------------------------------------------------------
	296	#%STATEND%
	297	# chmod 666 ${mrun_path}/statistik/mrun_statistik
	298	# fi
	299	#
	300	# # EINTRAG IN DIE STATISTIK-DATEI
	301	# string4=$host
	302	# string5=$locat
	303	# if [[ "$job_on_file" = "" && $locat != control_c && $locat != user_abort ]]
	304	# then
	305	# if [[ $do_batch = true ]]
	306	# then
	307	# printf "$string1$string2$string3$string4$string5$mrun_com \n" >> ${mrun_path}/statistik/mrun_statistik
	308	# else
	309	# printf "$string1$string2$string3$string4$string5$mc \n" >> ${mrun_path}/statistik/mrun_statistik
	310	# fi
	311	# fi
[69]	312	echo " " > /dev/null
[1]	313	fi
	314
	315	if [[ $locat != normal && $locat != control_c && $locat != local_compile ]]
	316	then
	317
	318	# EVENTUELLE ERROR-KOMMANDOS ABARBEITEN
	319	(( i = 0 ))
	320	while (( i < iec ))
	321	do
	322	(( i = i + 1 ))
	323	printf "\n *** Execution of ERROR-command:\n"
	324	printf " >>> ${err_command[$i]}\n"
	325	eval ${err_command[$i]}
	326	done
	327	if [[ -n $interpreted_config_file ]] then
	328	rm -rf $interpreted_config_file
	329	fi
[71]	330	if [[ -n .mrun_environment ]] then
	331	rm -rf .mrun_environment
	332	fi
[1]	333	if [[ $tmpcreate = true ]]
	334	then
	335	printf "\n *** Contents of \"$TEMPDIR\":\n"
	336	ls -al; cd
	337	[[ $delete_temporary_catalog = true ]] && rm -rf $TEMPDIR
	338	fi
	339	if [[ -f ~/job_queue/JOBINFO.$QSUB_REQID ]]
	340	then
	341	rm -rf ~/job_queue/JOBINFO.$QSUB_REQID
	342	fi
	343	printf "\n\n+++ MRUN killed \n\n"
	344	elif [[ $locat != control_c ]]
	345	then
	346	printf "\n\n --> all actions finished\n\n"
	347	printf " Bye, bye $usern !!\n\n"
	348	fi' exit
	349
	350
	351	# BEI TERMINAL-BREAK:
[83]	352	trap 'rm -rf $working_directory/tmp_mrun
[69]	353	[[ $tmpcreate = true ]] && (cd; rm -rf $TEMPDIR)
[1]	354	if [[ -f ~/job_queue/JOBINFO.$QSUB_REQID ]]
	355	then
	356	rm -rf ~/job_queue/JOBINFO.$QSUB_REQID
	357	fi
	358	printf "\n+++ MRUN killed by \"^C\" \n\n"
	359	locat=control_c
	360	exit
	361	' 2
	362
	363
[22]	364	# CHECK IF THE PATH FOR THE PALM BINARIES (SCRIPTS+UTILITY-PROGRAMS) HAS
	365	# BEEN SET
	366	if [[ "$PALM_BIN" = "" ]]
	367	then
	368	printf "\n +++ environment variable PALM_BIN has not been set"
	369	printf "\n please set it to the directory where the PALM scripts are located"
	370	locat=palm_bin; exit
	371	fi
[180]	372	export PATH=$PALM_BIN:$PATH
[22]	373
	374
[1]	375
	376	# SHELLSCRIPT-OPTIONEN EINLESEN UND KOMMANDO NEU ZUSAMMENSETZEN, FALLS ES
	377	# FUER FOLGEJOBS BENOETIGT WIRD
[122]	378	while getopts :a:AbBc:Cd:D:Fg:G:h:H:i:IkK:m:M:n:o:Op:P:q:r:R:s:St:T:u:U:vxX:Y option
[1]	379	do
	380	case $option in
	381	(a) afname=$OPTARG;;
	382	(A) store_on_archive_system=false; mc="$mc -A";;
	383	(b) do_batch=true; mc="$mc -b";;
	384	(B) delete_temporary_catalog=false; mc="$mc -B";;
	385	(c) config_file=$OPTARG; mc="$mc -c$OPTARG";;
[5]	386	(C) restart_run=true; mc="$mc -C";;
[1]	387	(d) fname=$OPTARG; mc="$mc -d$OPTARG";;
	388	(D) cpp_opts="$cpp_opts $OPTARG"; mc="$mc -D$OPTARG";;
[79]	389	(F) job_on_file="-D"; mc="$mc -F";;
[122]	390	(g) group_number=$OPTARG; mc="$mc -g$OPTARG";;
[78]	391	(G) global_revision=$OPTARG; mc="$mc -G'$OPTARG'";;
[1]	392	(h) host=$OPTARG; mc="$mc -h$OPTARG";;
	393	(H) fromhost=$OPTARG; mc="$mc -H$OPTARG";;
	394	(i) input_list=$OPTARG; mc="$mc -i'$OPTARG'";;
	395	(I) ignore_archive_error=true; mc="$mc -I";;
	396	(k) keep_data_from_previous_run=true; mc="$mc -k";;
	397	(K) additional_conditions="$OPTARG"; mc="$mc -K$OPTARG";;
	398	(m) memory=$OPTARG; mc="$mc -m$OPTARG";;
	399	(M) makefile=$OPTARG; mc="$mc -M$OPTARG";;
	400	(n) node_usage=$OPTARG; mc="$mc -n$OPTARG";;
	401	(o) output_list=$OPTARG; mc="$mc -o'$OPTARG'";;
	402	(O) use_openmp=true; mc="$mc -O";;
	403	(p) package_list=$OPTARG; mc="$mc -p'$OPTARG'";;
	404	(P) return_password=$OPTARG; mc="$mc -P$OPTARG";;
	405	(q) queue=$OPTARG; mc="$mc -q$OPTARG";;
	406	(r) run_mode=$OPTARG; mc="$mc -r'$OPTARG'";;
	407	(R) remotecall=true;return_addres=$OPTARG; mc="$mc -R$OPTARG";;
	408	(s) source_list=$OPTARG; mc="$mc -s'$OPTARG'";;
	409	(S) read_from_config=false; mc="$mc -S";;
	410	(t) cpumax=$OPTARG; mc="$mc -t$OPTARG";;
	411	(T) tasks_per_node=$OPTARG; mc="$mc -T$OPTARG";;
	412	(u) remote_username=$OPTARG; mc="$mc -u$OPTARG";;
	413	(U) return_username=$OPTARG; mc="$mc -U$OPTARG";;
	414	(v) silent=true; mc="$mc -v";;
	415	(x) do_trace=true;set -x; mc="$mc -x";;
	416	(X) numprocs=$OPTARG; mc="$mc -X$OPTARG";;
[102]	417	(Y) run_coupled_model=true; mc="$mc -Y";;
[1]	418	(\?) printf "\n +++ unknown option $OPTARG \n"
	419	printf "\n --> type \"$0 ?\" for available options \n"
	420	locat=parameter;exit;;
	421	esac
	422	done
	423
	424
	425	# EVTL. POSITIONSPARAMETER EINLESEN
	426	# ZUR ZEIT GIBT ES NUR DEN PARAMETER ? (=KURZINFO)
	427	shift OPTIND-1
	428
	429
	430	# KURZE AUFRUFBESCHREIBUNG WIRD HIER AUSGEGEBEN
	431	if [[ "$1" = "?" ]]
	432	then
	433	(printf "\n *** mrun can be called as follows:\n"
	434	printf "\n $mrun_script_name -b -c.. -d.. -D.. -f.. -F -h.. -i.. -I -K.. -m.. -o.. -p.. -r.. -R -s.. -t.. -T.. -v -x -X.. <modus>\n"
	435	printf "\n Description of available options:\n"
	436	printf "\n Option Description Default-Value"
	437	printf "\n -a base name of input files equiv. -d"
	438	printf "\n -A no archiving when using file-attribute fl"
	439	printf "\n -b batch-job on local machine ---"
	440	printf "\n -B do not delete temporary directory at end ---"
	441	printf "\n -c configuration file .mrun.config"
	442	printf "\n -d base name of files attached to program test"
	443	printf "\n -D preprocessor(cpp)-directives \"\" "
	444	printf "\n -F create remote job file only ---"
	445	printf "\n -h execution host $localhost_realname"
	446	printf "\n -i INPUT control list \"\" "
	447	printf "\n -I archiving errors of previous batch-jobs"
	448	printf "\n will be ignored"
	449	printf "\n -k keep data from previous run"
	450	printf "\n -K additional conditions for controling"
	451	printf "\n usage of conditional code and"
	452	printf "\n env-variables in configuration file \"\" "
	453	printf "\n -m memory demand in MB (batch-jobs) 0 MB"
	454	printf "\n -M Makefile name Makefile"
	455	printf "\n -n node usage (shared/not_shared) depending on -h"
	456	printf "\n -o OUTPUT control list \"\" "
	457	printf "\n -O use OpenMP ---"
	458	printf "\n -p software package list \"\" "
	459	printf "\n -q queue \"$queue\" "
	460	printf "\n -r run control list (combines -i -o) \"\" "
	461	printf "\n -s filenames of routines to be compiled \"\" "
	462	printf "\n must end with .f, .f90, .F, or .c !"
	463	printf "\n use \"..\" for more than one file and wildcards"
	464	printf "\n -s TEST compiles all files with w-permit"
	465	printf "\n -S config file interpreted by shellscript ---"
	466	printf "\n -t allowed cpu-time in seconds (batch) 0"
	467	printf "\n -T tasks per node depending on -h"
	468	printf "\n -u username on remote machine \"\" "
	469	printf "\n -v no prompt for confirmation ---"
	470	printf "\n -x tracing of mrun for debug purposes ---"
	471	printf "\n -X # of processors (on parallel machines) 1"
[102]	472	printf "\n -Y run coupled model ---"
[1]	473	printf "\n "
	474	printf "\n Possible values of positional parameter <modus>:"
	475	printf "\n \"?\" - this outline \n\n") \| more
	476	exit
	477	elif [[ "$1" != "" ]]
	478	then
	479	printf "\n +++ positional parameter $1 unknown \n"
	480	locat=parameter; exit
	481	fi
	482
	483
	484
	485	# KURZE STARTMELDUNG
	486	printf "\n*** $version "
	487	printf "\n will be executed. Please wait ..."
	488
	489
[82]	490
	491	# PRUEFEN, OB KONFIGURATIONS-DATEI VORHANDEN
	492	if [[ ! -f $config_file ]]
	493	then
	494	printf "\n\n +++ configuration file: "
	495	printf "\n $config_file"
	496	printf "\n does not exist"
	497	locat=connect; exit
	498	fi
	499
	500
	501	# HOST-IDENTIFIER (local_host) AUS KONFIGURATIONSDATEI BESTIMMEN
	502	line=""
	503	grep "%host_identifier" $config_file > tmp_mrun
	504	while read line
	505	do
	506	if [[ "$line" != "" \|\| $(echo $line \| cut -c1) != "#" ]]
	507	then
	508	HOSTNAME=`echo $line \| cut -d" " -s -f2`
	509	host_identifier=`echo $line \| cut -d" " -s -f3`
[83]	510	if [[ $localhost_realname = $HOSTNAME ]]
[82]	511	then
	512	localhost=$host_identifier
	513	break
	514	fi
	515	fi
	516	done < tmp_mrun
	517
	518	if [[ "$localhost" = "" ]]
	519	then
	520	printf "\n\n +++ no host identifier found in configuration file \"$config_file\""
	521	printf "\n for local host \"$localhost_realname\"."
	522	printf "\n Please add line"
	523	printf "\n \"\%host_identifier $localhost_realname <identifier>\""
	524	printf "\n to the configuration file."
	525	locat=localhost; exit
	526	fi
	527
	528
	529
	530	# HOSTSPEZIFISCHE VARIABLEN SETZEN
	531	case $localhost_realname in
	532	(breg-en0\|berni-en0) archive_system=tivoli;;
	533	(cs*) archive_system=ut;;
	534	(fimm.bccs.uib.no) fimm=true;;
	535	(gate\|n-sx) PATH=$PALM_BIN:$PATH:/usr/bin/nqsII;;
	536	(hreg-en0\|hanni-en0) archive_system=tivoli;;
	537	(scirocco) scirocco=true;;
	538	esac
	539
	540
	541
[1]	542	# BASISNAME DER INPUT-DATEIEN GLEICH ALLGEMEINEM BASISNAMEN SETZEN,
	543	# WENN NICHT VOM BENUTZER ANDERS BESTIMMT
	544	[[ "$afname" = "" ]] && afname=$fname
	545
	546
	547	# EVTL. RUN-MODUS DEN I/O-LISTEN HINZUFUEGEN
	548	if [[ "$run_mode" != "" ]]
	549	then
	550	input_list="$input_list $run_mode"
	551	output_list="$output_list $run_mode"
	552	fi
	553
	554
	555	# RECHNERNAMEN ABSPEICHERN, VON DEM AUS JOB GESTARTET WIRD,
	556	# ALLERDINGS NUR DANN, WENN NICHT PER OPTION -H BEREITS EIN WERT
	557	# ZUGEWIESEN WURDE (MRUN MACHT DIES IMMER, WENN ES SELBST BATCH-JOBS
	558	# STARTET)
	559	if [[ "$fromhost" = "" ]]
	560	then
	561	fromhost=$localhost
	562	fi
	563
	564
	565	# PRUEFEN, OB MRUN NUR TESTWEISE AUF DER LOKALEN MASCHINE KOMPILIEREN SOLL
	566	if [[ "$source_list" = LOCAL_COMPILE_TEST ]]
	567	then
	568	source_list=TEST
	569	local_compile=true
	570	host=$localhost
	571	fi
	572
	573
	574	# PRUEFEN, OB AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL
	575	# WERT VON do_remote WIRD FUER DATEIVERBINDUNGEN BENOETIGT.
	576	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
	577	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
	578	if [[ -n $host && "$host" != $localhost ]]
	579	then
	580	do_batch=true
	581	do_remote=true
	582	case $host in
[181]	583	(ibm\|ibmb\|ibmh\|ibms\|ibmy\|nech\|neck\|lcsgib\|lcsgih\|lctit\|unics) true;;
[1]	584	(*) printf "\n"
[83]	585	printf "\n +++ sorry: execution of batch jobs on remote host \"$host\""
	586	printf "\n is not available"
[1]	587	locat=nqs; (( iec = 0 )); exit;;
	588	esac
	589	else
	590	host=$localhost
	591	fi
	592
	593
	594	# ZUSATZBEDINGUNGEN (OPTION -K) AUSWERTEN
	595	if [[ -n $additional_conditions ]]
	596	then
[69]	597	# echo $additional_conditions \| cut -d" " -f1-3 \| read cond1 cond2 dummy
	598	cond1=`echo $additional_conditions \| cut -d" " -f1`
	599	cond2=`echo $additional_conditions \| cut -d" " -s -f2`
	600	dummy=`echo $additional_conditions \| cut -d" " -s -f3`
[1]	601	if [[ -n $dummy ]]
	602	then
	603	printf "\n +++ more than 2 additional conditions given for Option \"-K\""
	604	locat=options; exit
	605	fi
	606	fi
	607
	608
	609	# PRUEFEN, OB EVTL. BEI VORHERGEHENDEM LAUF (KETTENJOB) EINE
	610	# ARCHIVIERUNG FEHLGESCHLAGEN IST
	611	if [[ -f ~/job_queue/ARCHIVE_ERROR_$fname ]]
	612	then
	613	if [[ $ignore_archive_error = false ]]
	614	then
	615	printf "\n +++ data archiving of previous run failed"
	616	printf "\n see directory \~/job_queue on remote machine"
	617	locat=archive; exit
	618	else
	619	printf "\n +++ warning: data archiving in a previous run failed"
	620	printf "\n MRUN continues, trying to get backup copy"
	621	fi
	622	fi
	623
	624
	625
	626	# LESEN UND INTERPRETIEREN DER KONFIGURATIONS-DATEI VOM SHELLSCRIPT AUS
	627	# VORUEBERGEHEND ZWINGEND AUF LINUX-RECHNERN
	628	if [[ "$read_from_config" = false ]]
	629	then
	630
	631	[[ $silent = false ]] && printf "\n Reading the configuration file... "
	632	while read zeile
	633	do
	634	[[ $silent = false ]] && printf "."
	635
	636
	637	# ZUERST EVENTUELL VORKOMMENDE ENVIRONMENT-VARIABLEN DURCH IHRE WERTE
	638	# ERSETZEN
	639	eval zeile=\"$zeile\"
	640
	641
	642	# INTERPRETATION DER ZEILE
[21]	643	if [[ "$(echo $zeile)" = "" ]]
[1]	644	then
[21]	645	# LEERZEILE, KEINE AKTION
	646	continue
[1]	647
[21]	648	elif [[ "$(echo $zeile \| cut -c1)" = "#" ]]
	649	then
	650
[1]	651	# ZEILE IST KOMMENTARZEILE
	652	true
	653
	654	elif [[ "$(echo $zeile \| cut -c1)" = "%" ]]
	655	then
	656
	657	# ZEILE DEFINIERT ENVIRONMENT-VARIABLE
	658	zeile=$(echo $zeile \| cut -c2-)
[69]	659	# echo $zeile \| cut -d" " -f1-5 \| read var value for_host for_cond1 for_cond2
	660	var=`echo $zeile \| cut -d" " -f1`
	661	value=`echo $zeile \| cut -d" " -s -f2`
	662	for_host=`echo $zeile \| cut -d" " -s -f3`
	663	for_cond1=`echo $zeile \| cut -d" " -s -f4`
	664	for_cond2=`echo $zeile \| cut -d" " -s -f5`
[1]	665
	666	if [[ "$for_host" = "" \|\| ( "$for_host" = $host && "$for_cond1" = "$cond1" && "$for_cond2" = "$cond2" ) \|\| $(echo "$input_list$output_list"\|grep -c "$for_host") != 0 ]]
	667	then
	668
	669	# BEI COMPILER- CPP- ODER LINKEROPTIONEN EVTL ":" DURCH " "
	670	# ERSETZEN. "::" WIRD DURCH ":" ERSETZT.
	671	value=`echo $value \| sed 's/::/%DUM%/g' \| sed 's/:/ /g' \| sed 's/%DUM%/:/g'`
	672
	673
	674	# ENVIRONMENT-VARIABLE WIRD WERT AUS KONFIGURATIONSDATEI
	675	# ZUGEWIESEN, WENN SIE SELBST NOCH KEINEN WERT UEBER DIE
	676	# ENTSPRECHENDE SCRIPT-OPTION ERHALTEN HAT. SOLCHE
	677	# VARIABLEN HAETTEN DANN DEN WERT "" ODER IM INTEGER-FALL DEN
	678	# WERT 0. ALLGEMEINE REGEL ALSO: SCRIPT-OPTION GEHT UEBER
	679	# KONFIGURATIONSDATEI
	680	if [[ "$(eval echo \$$var)" = "" \|\| "$(eval echo \$$var)" = "0" ]]
	681	then
	682	eval $var=\$value
	683
	684	# EVTL. BILDSCHIRMAUSGABEN DER ENVIRONMENT-VARIABLEN
	685	if [[ $do_trace = true ]]
	686	then
	687	printf "\n*** ENVIRONMENT-VARIABLE $var = $value"
	688	fi
	689	fi
	690
	691	# WENN ENVIRONMENT-VARIABLE HOST VEREINBART, DANN SOFORT AUSWERTEN
	692	# WERT VON do-remote WIRD BEI DATEIVERBINDUNGEN BENOETIGT
	693	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
	694	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
	695	if [[ $var = host ]]
	696	then
	697	if [[ -n $host && "$host" != $localhost ]]
	698	then
	699	do_batch=true
	700	do_remote=true
	701	case $host in
[181]	702	(ibm\|ibms\|ibmy\|lcsgib\|lcsgih\|lctit\|nech\|neck\|unics) true;;
[83]	703	(*) printf "\n +++ sorry: execution of batch jobs on remote host \"$host\""
	704	printf "\n is not available"
[1]	705	locat=nqs; exit;;
	706	esac
	707	else
	708	host=$localhost
	709	fi
	710	fi
	711
	712	# VOM BENUTZER DEFINIERTE ENVIRONMENT VARIABLEN MUESSEN PRINZIPIELL
	713	# EXPORTIERT WERDEN, DA SIE VIELLEICHT IN WEITER UNTEN AUFZURUFEN-
	714	# DEN PROGRAMMEN BENOETIGT WERDEN
	715	export $var
	716	fi
	717
	718
	719
	720
	721	elif [[ "$(echo $zeile \| cut -c1-3)" = "EC:" ]]
	722	then
	723
	724	# ZEILE DEFINIERT ERROR-KOMMANDO
	725	(( iec = iec + 1 ))
	726	zeile=$(echo $zeile \| cut -c4-)
	727	err_command[$iec]="$zeile"
	728
	729	elif [[ "$(echo $zeile \| cut -c1-3)" = "IC:" ]]
	730	then
	731
	732	# ZEILE DEFINIERT INPUT-KOMMANDO
	733	(( iic = iic + 1 ))
	734	zeile=$(echo $zeile \| cut -c4-)
	735	in_command[$iic]="$zeile"
	736
	737	elif [[ "$(echo $zeile \| cut -c1-3)" = "OC:" ]]
	738	then
	739
	740	# ZEILE DEFINIERT OUTPUT-KOMMANDO
	741	(( ioc = ioc + 1 ))
	742	zeile=$(echo $zeile \| cut -c4-)
	743	out_command[$ioc]="$zeile"
	744
	745	else
	746
	747	# ZEILE DEFINIERT DATEIVERBINDUNG. EINLESEN DER DATEIEIGENSCHAFTEN
	748	# s2a: in/out - Feld
	749	# s2b: loc - Feld (optional)
	750	# s2c: tr/ar - Feld (optional)
[69]	751	# echo $zeile \| cut -d" " -f1-2 \| read s1 s2
	752	s1=`echo $zeile \| cut -d" " -f1`
	753	s2=`echo $zeile \| cut -d" " -s -f2`
[1]	754	s2a=$(echo $s2 \| cut -d":" -f1)
	755	if [[ $(echo $s2 \| grep -c ":") = 0 ]]
	756	then
	757	s2b=""
	758	s2c=""
	759	else
[69]	760	# echo $s2 \| cut -d":" -f2-3 \| sed 's/:/ /g' \| read s2b s2c
	761	s2b=`echo $s2 \| cut -d":" -f2 \| sed 's/:/ /g'`
	762	s2c=`echo $s2 \| cut -d":" -s -f3 \| sed 's/:/ /g'`
[1]	763	fi
[69]	764	# echo $zeile \| cut -d" " -f3-6 \| read s3 s4 s5 s6
	765	s3=`echo $zeile \| cut -d" " -f3`
	766	s4=`echo $zeile \| cut -d" " -s -f4`
	767	s5=`echo $zeile \| cut -d" " -s -f5`
	768	s6=`echo $zeile \| cut -d" " -s -f6`
[1]	769
	770
	771	# ABSPEICHERN DER DATEIVERBINDUNG, FALLS IN INPUT- ODER OUTPUT-LIST
	772	# VERMERKT. VARIABLE S3 KANN AUCH LISTE ENTHALTEN (FELDTRENNER ":")
	773	# DATEIVERBINDUNG WIRD DANN NICHT ABGESPEICHERT UND GEPRUEFT, WENN
	774	# PROGRAMMLAUF AUF REMOTE-MASCHINE ERFOLGT UND DATEI NUR LOKAL VOR-
	775	# HANDEN SEIN MUSS (D.H. s2b = loc)
	776	IFSALT="$IFS"; IFS="$IFS:"
	777	if [[ "$s2a" = in && ! ( $do_remote = true && ( "$s2b" = loc \|\| "$s2b" = locopt ) ) ]]
	778	then
	779	found=false
	780	for actual in $input_list
	781	do
	782	for formal in $s3
	783	do
	784	[[ $actual = $formal \|\| "$formal" = "-" ]] && found=true
	785	done
	786	done
	787	if [[ $found = true ]]
	788	then
	789	(( iin = iin + 1 ))
	790	localin[$iin]=$s1; transin[$iin]=$s2b; actionin[$iin]=$s2c;
	791	typein[$iin]=$s3; pathin[$iin]=$s4; endin[$iin]=$s5;
	792	extin[$iin]=$s6
	793	fi
	794	elif [[ "$s2a" = out && ! ( $do_remote = true && "$s2b" = loc ) ]]
	795	then
	796	found=false
	797	for actual in $output_list
	798	do
	799	for formal in $s3
	800	do
	801	[[ $actual = $formal \|\| "$formal" = "-" ]] && found=true
	802	done
	803	done
	804	if [[ $found = true ]]
	805	then
	806	(( iout = iout + 1 ))
	807	localout[$iout]=$s1; actionout[$iout]=$s2c; typeout[$iout]=$s3;
	808	pathout[$iout]=$s4; endout[$iout]=$s5; extout[$iout]=$s6
	809	fi
	810	elif [[ "$s2a" != in && "$s2a" != out ]]
	811	then
	812	printf "\n +++ I/O-attribute in configuration file $config_file has the invalid"
	813	printf "\n value \"$s2\". Only \"in\" and \"out\" are allowed!"
	814	locat=connect; exit
	815	fi
	816	IFS="$IFSALT"
	817	fi
	818	done < $config_file
	819
	820	else
	821
	822
	823	# INTERPRETATION DER KONFIGURATIONSDATEI MITTELS FORTRAN 90 - PROGRAMM
	824	[[ $silent = false ]] && printf "..."
	825	export cond1 cond2 config_file do_remote do_trace input_list localhost output_list
	826	export interpreted_config_file=.icf.$RANDOM
	827
	828
[69]	829
	830	# ENVIRONMENT-VARIABLEN FUER INTERPRET_CONFIG UEBER NAMELIST_DATEI ZUR
	831	# VERFUEGUNG STELLEN
	832	cat > .mrun_environment << %%END%%
	833	&mrun_environment cond1 = '$cond1', cond2 = '$cond2',
	834	config_file = '$config_file', do_remote = '$do_remote',
	835	do_trace = '$do_trace', host = '$host',
	836	input_list = '$input_list', icf = '$interpreted_config_file',
	837	localhost = '$localhost', output_list = '$output_list' /
	838
	839	%%END%%
	840
	841	# WERTE VON MRUN-OPTIONEN SICHERN UND DAMIT GEGEBENENFALLS SPAETER DIE
	842	# IN DER KONFIGURAIONSDATEI ANGEGEBENEN WERTE UEBERSTEUERN
	843	mrun_memory=$memory
[127]	844	mrun_group_number=$group_number
[69]	845	mrun_cpumax=$cpumax
	846	mrun_numprocs=$numprocs
	847
[66]	848	if [[ $localhost_realname = "gate" ]]
	849	then
	850	interpret_config_gate.x
	851	else
	852	interpret_config.x
	853	fi
[71]	854	rm .mrun_environment
[1]	855
[71]	856
[1]	857	# AUSFUEHRUNG DER GENERIERTEN SHELL-KOMMANDOS IN DIESER SHELL
	858	chmod u+x $interpreted_config_file
	859	export PATH=$PATH:.
	860	. $interpreted_config_file
[71]	861	rm $interpreted_config_file
[1]	862
[71]	863
[69]	864	# OPTIONSWERTE UEBERSTEUERN KONFIGURATIONSDATEI
[71]	865	[[ $mrun_memory != 0 ]] && memory=$mrun_memory
[127]	866	[[ "$mrun_group_number" != "none" ]] && group_number=$mrun_group_number
[71]	867	[[ $mrun_cpumax != 0 ]] && cpumax=$mrun_cpumax
	868	[[ "$mrun_numprocs" != "" ]] && numprocs=$mrun_numprocs
[69]	869
[1]	870	fi
	871
	872
	873	# QUELLTEXTVERZEICHNIS AUF LOKALER MASCHINE AUS KONFIGURATIONSDATEI
	874	# BESTIMMEN (WUERDE SONST EVTL. DAS VERZEICHNIS DES JEWEILS UNTER -h
	875	# ANGEGEBENEN REMOTE-RECHNERS SEIN)
	876	# BEI BATCH-JOBS SIND DIE ZU UEBERSETZENDEN PROGRAMMTEILE SCHON KOMPLETT
	877	if [[ "$SOURCES_COMPLETE" = "" ]]
	878	then
	879
	880	# ZUERST PRUEFEN, OB EIN GLOBALER QUELLTEXTPFAD FUER ALLE RECHNER
	881	# VEREINBART WURDE
	882	source_path=""
	883	line=""
	884	grep "%source_path" $config_file > tmp_mrun
	885	while read line
	886	do
	887	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
	888	then
	889	if [[ "$(echo $line \| cut -d" " -f3)" = "" ]]
	890	then
	891	global_source_path=`echo $line \| cut -d" " -f2`
	892	fi
	893	fi
	894	done < tmp_mrun
	895
	896	line=""
	897	found=false
	898	grep " $localhost" $config_file \| grep "%source_path" > tmp_mrun
	899	while read line
	900	do
	901	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
	902	then
	903	if [[ $found = true ]]
	904	then
	905	printf "\n\n +++ more than one source path found in configuration file"
	906	printf "\n for local host \"$localhost\" "
	907	locat=source_path; exit
	908	fi
	909	source_path=`echo $line \| cut -d" " -f2`
	910	found=true
	911	fi
	912	done < tmp_mrun
	913	rm tmp_mrun
	914
	915	if [[ "$source_path" = "" ]]
	916	then
	917	if [[ "$global_source_path" != "" ]]
	918	then
	919	source_path=$global_source_path
	920	else
	921	printf "\n\n +++ no source path found in configuration file"
	922	printf "\n for local host \"$localhost\" "
	923	locat=source_path; exit
	924	fi
	925	fi
	926	eval source_path=$source_path
	927
	928	if [[ ! -d $source_path ]]
	929	then
	930	printf "\n\n +++ source path \"$source_path\" on local host"
	931	printf "\n \"$localhost\" does not exist"
	932	locat=source_path; exit
	933	fi
	934
	935	fi
	936
	937
[78]	938	# GLOBALE REVISIONSNUMMER ERMITTELN (FORTSETZUNGSLAEUFEN WIRD DIESE
	939	# DURCH OPTION -G MITGETEILT)
	940	if [[ "$global_revision" = "" ]]
	941	then
	942	global_revision=`svnversion $source_path 2>/dev/null`
	943	global_revision="Rev: $global_revision"
	944	fi
[1]	945
[78]	946
[1]	947	# NOCHMAL PRUEFEN, OB AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL
	948	# (HOST KANN IN KONFIGURATIONSDATEI ANDERS FESTGELEGT WORDEN SEIN)
	949	# WERT VON do_remote WIRD FUER DATEIVERBINDUNGEN BENOETIGT.
	950	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
	951	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
	952	if [[ -n $host && "$host" != $localhost ]]
	953	then
	954	do_batch=true
	955	do_remote=true
	956	case $host in
[181]	957	(ibm\|ibmb\|ibmh\|ibms\|ibmy\|lcsgib\|lcsgih\|lctit\|nech\|neck\|unics) true;;
[1]	958	(*) printf "\n"
[83]	959	printf "\n +++ sorry: execution of batch jobs on remote host \"$host\""
	960	printf "\n is not available"
[1]	961	locat=nqs; (( iec = 0 )); exit;;
	962	esac
	963	else
	964	host=$localhost
	965	fi
	966
	967
	968	# PRUEFUNG EINIGER PROZESSORZAHLANGABEN BEI RECHNUNGEN AUF PARALLELRECHNERN
	969	if [[ "$cond1" = parallel \|\| "$cond2" = parallel ]]
	970	then
	971
	972	# PRUEFEN, OB DIE ANZAHL DER ZU VERWENDENDEN PES ANGEGEBEN WURDE
	973	if [[ ! -n $numprocs ]]
	974	then
	975	printf "\n"
	976	printf "\n +++ option \"-K parallel\" requires additional specification"
	977	printf "\n of the number of processors to be used by"
	978	printf "\n mrun-option \"-X\" or by environment-variable"
	979	printf "\n \"numprocs\" in the configuration file"
	980	locat=numprocs; (( iec = 0 )); exit
	981	fi
	982
	983	# PRUEFEN, OB DIE PROZESSORANZAHL PRO KNOTEN ANGEGEBEN WURDE (GGF.
	984	# DEFAULT-WERT SETZEN) UND OB SIE EIN GANZZAHLIGER TEILER DER
	985	# GESAMTPROZESSORANZAHL IST
	986	if [[ $host = nech \|\| $host = neck \|\| $host = ibmh \|\| $host = ibmb \|\| $host = ibms ]]
	987	then
	988	[[ "$tasks_per_node" = "" ]] && tasks_per_node=6
	989	(( ival = $tasks_per_node ))
	990	(( pes = numprocs ))
	991	# if [[ $(echo $package_list \| grep -c dvrp_graphics+1PE) = 1 ]]
	992	# then
	993	# (( pes = pes - 1 ))
	994	# fi
	995	(( ii = pes / ival ))
	996	if (( pes - ii * ival > 0 ))
	997	then
	998	printf "\n"
	999	printf "\n +++ tasks per node (option \"-T\") must be an integral"
	1000	printf "\n divisor of the total number of processors (option \"-X\")"
	1001	printf "\n values of this mrun-call: \"-T $tasks_per_node\" \"-X $numprocs\""
	1002	locat=tasks_per_node; (( iec = 0 )); exit
	1003	fi
	1004	fi
	1005
	1006	# IBMY HAT NUR EINEN KNOTEN
	1007	if [[ $host = ibmy ]]
	1008	then
	1009	if [[ "$tasks_per_node" != "" && "$tasks_per_node" != "$numprocs" ]]
	1010	then
	1011	printf "\n"
	1012	printf "\n +++ on ibmy, tasks per node (option \"-T\") must be equal to the"
	1013	printf "\n total number of processors (option \"-X\")"
	1014	printf "\n values of this mrun-call: \"-T $tasks_per_node\" \"-X $numprocs\""
	1015	locat=tasks_per_node; (( iec = 0 )); exit
	1016	fi
	1017	fi
	1018
	1019	# FALLS OPENMP PARALLELISIERUNG VERWENDET WERDEN SOLL, ANZAHL VON THREADS
	1020	# SETZEN UND ZAHL DER TASKS PRO KNOTEN AUF 1 SETZEN
	1021	if [[ $use_openmp = true ]]
	1022	then
	1023	threads_per_task=$tasks_per_node
	1024	tasks_per_node=1
	1025	fi
	1026	OOPT="-O $threads_per_task"
	1027	TOPT="-T $tasks_per_node"
	1028
	1029	# GESAMTZAHL DER KNOTEN BESTIMMEN
	1030	if [[ "$tasks_per_node" != "" ]]
	1031	then
	1032	(( nodes = numprocs / ( tasks_per_node * threads_per_task ) ))
	1033	fi
	1034
	1035	# PRUEFEN, OB NODE USAGE EINEN ERLAUBTEN WERT HAT BZW. DEN DEFAULT
	1036	# SETZEN
	1037	if [[ $node_usage = default ]]
	1038	then
	1039	if [[ $host = ibms ]]
	1040	then
	1041	node_usage=shared
[118]	1042	elif [[ $host = lctit ]]
	1043	then
[129]	1044	node_usage=sla3
[181]	1045	elif [[ $(echo $host \| cut -c1-5) = lcsgi ]]
	1046	then
	1047	node_usage=singlejob
[1]	1048	else
	1049	node_usage=not_shared
	1050	fi
	1051	fi
[181]	1052
	1053	if [[ $node_usage != shared && $node_usage != not_shared && $node_usage != singlejob && "$(echo $node_usage \| cut -c1-3)" != "sla" && $node_usage != novice ]]
[1]	1054	then
	1055	printf "\n"
	1056	printf "\n +++ node usage (option \"-n\") is only allowed to be set"
	1057	printf "\n \"shared\" or \"not_shared\""
	1058	locat=tasks_per_node; (( iec = 0 )); exit
	1059	fi
	1060
	1061	fi
	1062
	1063	# PRUEFEN, OB HOSTFILE EXISTIERT
	1064	if [[ -n $hostfile ]]
	1065	then
	1066	if [[ ! -f $hostfile ]]
	1067	then
	1068	printf "\n"
	1069	printf "\n +++ hostfile \"$hostfile\" does not exist"
	1070	locat=hostfile; exit
	1071	fi
	1072	fi
	1073
	1074	# PRUEFEN, OB RHOSTS DATEI EXISTIERT. GEGEBENENFALLS ANLEGEN BZW. ERWEITERN
	1075	if [[ $host = ibmy && $do_remote = false ]]
	1076	then
	1077	if [[ ! -f $HOME/.rhosts ]]
	1078	then
	1079	echo "gfdl5.yonsei.ac.kr" > $HOME/.rhosts
	1080	printf "\n\n *** file:"
	1081	printf "\n $HOME/.rhosts"
	1082	printf "\n was created\n"
	1083	fi
	1084	if [[ $(grep -c gfdl5.yonsei.ac.kr $HOME/.rhosts) = 0 ]]
	1085	then
	1086	echo "gfdl5.yonsei.ac.kr" >> $HOME/.rhosts
	1087	printf "\n\n *** file:"
	1088	printf "\n $HOME/.rhosts"
	1089	printf "\n was extended by the name of the current host\n"
	1090	fi
	1091	fi
	1092
	1093
	1094
	1095	# FALLS NICHT VORGEGEBEN, DEFAULT-QUEUE AUF DER ZIELMASCHINE FESTLEGEN
	1096	if [[ $queue = none ]]
	1097	then
	1098	case $host in
	1099	(ibmb) if [[ $node_usage = shared ]]
	1100	then
	1101	queue=cshare
	1102	else
	1103	queue=csolo
	1104	fi;;
	1105	(ibmh) if [[ $node_usage = shared ]]
	1106	then
	1107	queue=cshare
	1108	else
	1109	queue=csolo
	1110	fi;;
	1111	(ibmy) queue=parallel;;
[129]	1112	(lctit) queue=sla3;;
[1]	1113	(nech) queue=none;;
	1114	(neck) queue=P;;
	1115	(unics) queue=unics;;
	1116	esac
	1117	fi
	1118
	1119
	1120	# VOLLSTAENDIGE DATEINAMEN DER INPUT-FILES BILDEN,
	1121	# INPUT-DATEIEN AUF VORHANDENSEIN PRUEFEN UND EVTL. HOECHSTE ZYKLUSNUMMER
	1122	# ERMITTELN
	1123	(( i = 0 ))
	1124	while (( i < iin ))
	1125	do
	1126	(( i = i + 1 ))
	1127	(( maxcycle = 0 ))
	1128
	1129	# NAMENSBILDUNG (EVTL. IST FESTER DATEINAME VORGEGEBEN)
	1130	if [[ "${actionin[$i]}" = di ]]
	1131	then
	1132	remotepathin[$i]=${pathin[$i]}/${endin[$i]} # REMOTE-PFAD ERST AUF
	1133	# REM-MASCHINE AUSWERTEN
	1134	eval filename=${pathin[$i]}/${endin[$i]}
	1135	else
	1136	remotepathin[$i]=${pathin[$i]}/${afname}${endin[$i]} # REMOTE-PFAD ERST AUF
	1137	# REM-MASCHINE AUSWERTEN
	1138	eval filename=${pathin[$i]}/${afname}${endin[$i]}
	1139	fi
	1140
	1141	# PRUEFEN AUF VORHANDENSEIN
	1142	if [[ $(ls $filename* 2>&1 \| grep -c "not found") = 1 \|\| \
	1143	$(ls $filename* 2>&1 \| grep -c "No such file") = 1 \|\| \
	1144	$(ls $filename* 2>&1 \| grep -c "does not exist") = 1 ]]
	1145	then
	1146	# DATEIEN MIT EXTENSION (Z.B. NC) MUESSEN NICHT ZWINGEND VORHANDEN
	1147	# SEIN, DESHALB IN SOLCHEN FAELLEN KEIN ABBRUCH. DIES IST NUR EINE
	1148	# VORUEBERGEHENDE LOESUNG (OKT 05). NICHT ZWINGEND BENOETIGTE
	1149	# EINGABEDATEIEN SOLLTEN EINE SPEZIELLE OPTION IN DER DATEI-
	1150	# VERBINDUNGSANWEISUNG BEKOMMEN (Z.B. inopt?)
	1151	if [[ "${transin[$i]}" != "locopt" ]]
	1152	then
	1153	printf "\n\n +++ INPUT-file: "
	1154	if [[ "${extin[$i]}" = "" ]]
	1155	then
	1156	printf "\n $filename"
	1157	else
	1158	printf "\n $filename.${extin[$i]}"
	1159	fi
	1160	printf "\n does not exist\n"
	1161	locat=input; exit
	1162	else
	1163	transin[$i]="unavailable"
	1164	fi
	1165	else
	1166
	1167	# ZYKLUSNUMMER FESTSTELLEN
	1168	ls -1 -d $filename > filelist 2>/dev/null
	1169	ls -1 -d $filename.* >> filelist 2>/dev/null
	1170	while read zeile
	1171	do
	1172	cycle=$(print $zeile \| cut -f2 -d".")
	1173	if [[ "$cycle" = "$zeile" ]]
	1174	then
	1175	(( icycle = 0 ))
	1176	elif [[ "$cycle" = "${extin[$i]}" ]]
	1177	then
	1178	(( icycle = 0 ))
	1179	else
	1180	(( icycle = $cycle ))
	1181	fi
	1182	if (( icycle > maxcycle ))
	1183	then
	1184	(( maxcycle = icycle ))
	1185	file_to_be_used=$zeile
	1186	fi
	1187	done <filelist
	1188	rm filelist
	1189
	1190	# EVTL. ZYKLUSNUMMER AN DATEINAMEN ANFUEGEN
	1191	if (( maxcycle > 0 ))
	1192	then
	1193	if [[ "${extin[$i]}" != " " && "${extin[$i]}" != "" ]]
	1194	then
	1195	filename=${filename}.$maxcycle.${extin[$i]}
	1196	else
	1197	filename=${filename}.$maxcycle
	1198	fi
	1199	else
	1200	if [[ "${extin[$i]}" != " " && "${extin[$i]}" != "" ]]
	1201	then
	1202	filename=${filename}.${extin[$i]}
	1203	fi
	1204	fi
	1205
	1206	# DATEINAMEN OHNE PFAD ABER MIT ZYKLUSNUMMER ABSPEICHERN,
	1207	# DA SPAETER BEI RUECKSPEICHERN VOM ARCHIVSYSTEM EVTL. BENOETIGT
	1208	absnamein[$i]=$filename
	1209	if (( maxcycle > 0 ))
	1210	then
	1211	if [[ "${actionin[$i]}" = di ]]
	1212	then
	1213	frelin[$i]=${endin[$i]}.$maxcycle
	1214	else
	1215	frelin[$i]=${afname}${endin[$i]}.$maxcycle
	1216	fi
	1217	else
	1218	if [[ "${actionin[$i]}" = di ]]
	1219	then
	1220	frelin[$i]=${endin[$i]}
	1221	else
	1222	frelin[$i]=${afname}${endin[$i]}
	1223	fi
	1224	fi
	1225
	1226	fi
	1227	done
	1228
	1229
	1230	# VOLLSTAENDIGE DATEINAMEN (OHNE $ ODER ~) DER OUTPUT-FILES BILDEN,
	1231	# OUTPUT-DATEIEN AUF VORHANDENSEIN PRUEFEN UND EVTL. HOECHSTE ZYKLUSNUMMER
	1232	# ERMITTELN ODER, FALLS NICHT VORHANDEN, PRUEFEN, OB SIE SICH ANLEGEN LASSEN
	1233	# DIESE AKTIONEN FINDEN NICHT STATT, WENN PROGRAMM AUF REMOTE-MASCHINE
	1234	# RECHNET UND DATEI ANSCHLIESSEND TRANSFERIERT WERDEN SOLL!
	1235	(( i = 0 ))
	1236	while (( i < iout ))
	1237	do
	1238	(( i = i + 1 ))
	1239	if [[ ! ( $fromhost != $localhost && ( "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = tra \|\| "${actionout[$i]}" = trpe ) ) ]]
	1240	then
	1241	if [[ "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = trpe ]]
	1242	then
	1243	actionout[$i]=""
	1244	elif [[ "${actionout[$i]}" = tra ]]
	1245	then
	1246	actionout[$i]=a
	1247	fi
	1248	(( maxcycle = 0 ))
	1249	eval filename=${pathout[$i]}/${fname}${endout[$i]}
	1250	eval catalogname=${pathout[$i]}
	1251	if [[ $(ls $filename* 2>&1 \| grep -c "not found") = 1 \|\| \
	1252	$(ls $filename* 2>&1 \| grep -c "No such file") = 1 \|\| \
	1253	$(ls $filename* 2>&1 \| grep -c "does not exist") = 1 ]]
	1254	then
	1255
	1256	# OUTPUT-DATEI NICHT VORHANDEN. PRUEFEN, OB ANLEGEN MOEGLICH.
	1257	if cat /dev/null > $filename
	1258	then
	1259	rm $filename
	1260	else
	1261
	1262	# PRUEFEN, OB KATALOG VORHANDEN UND EVTL. DIESEN ANLEGEN
	1263	if [[ ! -d $catalogname ]]
	1264	then
	1265	if mkdir -p $catalogname
	1266	then
	1267	printf "\n\n *** directory:"
	1268	printf "\n $catalogname"
	1269	printf "\n was created\n"
	1270	else
	1271	printf "\n\n +++ OUTPUT-file:"
	1272	printf "\n $filename"
	1273	printf "\n cannot be created, because directory does not exist"
	1274	printf "\n and cannot be created either"
	1275	printf "\n"
	1276	locat=output ; exit
	1277	fi 2>/dev/null
	1278	else
	1279	printf "\n\n +++ OUTPUT-file:"
	1280	printf "\n $filename"
	1281	printf "\n cannot be created, although directory exists"
	1282	printf "\n"
	1283	locat=output ; exit
	1284	fi
	1285	fi 2>/dev/null
	1286	else
	1287
	1288	# ZYKLUSNUMMER FESTSTELLEN
	1289	ls -1 -d $filename > filelist 2>/dev/null
	1290	ls -1 -d $filename.* >> filelist 2>/dev/null
	1291	while read zeile
	1292	do
	1293	cycle=$(print $zeile \| cut -f2 -d".")
	1294	if [[ "$cycle" = "$zeile" \|\| "$cycle" = ${extout[$i]} ]]
	1295	then
	1296	(( icycle = 1 ))
	1297	else
	1298	(( icycle = $cycle + 1 ))
	1299	fi
	1300	if (( icycle > maxcycle ))
	1301	then
	1302	(( maxcycle = icycle ))
	1303	fi
	1304	done <filelist
	1305	rm filelist
	1306	fi
	1307
	1308	# EVTL. ZYKLUSNUMMER AN DATEINAMEN ANFUEGEN UND PRUEFEN, OB SICH
	1309	# DATEI AUCH WIRKLICH ANLEGEN LAESST. IM APPEND-FALL MUSS AN DEN
	1310	# HOECHSTEN VORHANDENEN ZYKLUS-ANGEHAENGT WERDEN. ANLAGEPRUEFUNG
	1311	# IST DANN NATUERLICH NICHT ZULAESSIG BZW. MOEGLICH
	1312	if [[ "${actionout[$i]}" != a ]]
	1313	then
	1314	if (( maxcycle > 0 ))
	1315	then
	1316	filename=${filename}.$maxcycle
	1317	if cat /dev/null > $filename
	1318	then
	1319	rm $filename
	1320	else
	1321	printf "\n +++ OUTPUT-file:"
	1322	printf "\n $filename"
	1323	printf "\n cannot be created"
	1324	locat=output ; exit
	1325	fi
	1326	fi
	1327	else
	1328	(( maxcycle = maxcycle - 1 ))
	1329	if (( maxcycle > 0 ))
	1330	then
	1331	filename=${filename}.$maxcycle
	1332	fi
	1333	fi
	1334
	1335	# DATEINAMEN OHNE PFAD ABER MIT ZYKLUSNUMMER ABSPEICHERN,
	1336	# DA SPAETER BEI ABLAGE AUF ARCHIVSYSTEM BZW. FUER
	1337	# DATEI OUTPUT_FILE_CONNECTIONS EVTL. BENOETIGT
	1338	pathout[$i]=$filename
	1339	if (( maxcycle > 0 ))
	1340	then
	1341	frelout[$i]=${fname}${endout[$i]}.$maxcycle
	1342	else
	1343	frelout[$i]=${fname}${endout[$i]}
	1344	fi
	1345
	1346	fi
	1347	done
	1348
	1349
[83]	1350	# DAS DVRP-PAKET ERFORDERT EINE ENTSPRECHENDE BIBLIOTHEK
	1351	if [[ $(echo $package_list \| grep -c dvrp_graphics) != 0 ]]
	1352	then
	1353	if [[ "$dvrp_inc" = "" ]]
	1354	then
	1355	printf "\n\n +++ no value for \"dvrp_inc\" given in configuration file"
	1356	printf "\n This is required for the dvrp_graphics package.\n"
	1357	locat=dvrp; exit
	1358	fi
	1359	if [[ "$dvrp_lib" = "" ]]
	1360	then
	1361	printf "\n\n +++ no value for \"dvrp_lib\" given in configuration file"
	1362	printf "\n This is required for the dvrp_graphics package.\n"
	1363	locat=dvrp; exit
	1364	fi
	1365	fi
	1366
	1367
[1]	1368	# PRUEFEN, OB ENTWEDER HAUPTPROGRAMM ODER NUR EIN AUSFUEHRBARES
	1369	# PROGRAMM VEREINBART WURDE (IN DIESEM FALL BRAUCHT IM WEITEREN NICHT
	1370	# UEBERSETZT ZU WERDEN)
	1371	if [[ "$mainprog" = "" && "$executable" = "" ]]
	1372	then
	1373	printf "\n +++ neither main program nor executable defined"
	1374	locat=source; exit
	1375	elif [[ "$mainprog" != "" && "$executable" != "" ]]
	1376	then
	1377	printf "\n +++ main program as well as executable defined"
	1378	locat=source; exit
	1379	elif [[ "$mainprog" = "" && "$executable" != "" ]]
	1380	then
	1381	do_compile=false
	1382	fi
	1383
	1384
	1385	# ALLE ZU UEBERSETZENDEN PROGRAMMTEILE ZUSAMMENSAMMELN
	1386	# BEI BATCH-JOBS IST DIES NICHT NOETIG, WEIL DIE PROGRAMMTEILE BEREITS DURCH
	1387	# DEN MRUN-AUFRUF ERMITTELT SIND, DER DEN BATCH-JOB GENERIERT HAT, UND
	1388	# IM VERZEICHNIS SOURCES_FOR_RUN_... ABGELEGT SIND
	1389	if [[ $do_compile = true && "$SOURCES_COMPLETE" = "" ]]
	1390	then
	1391
[5]	1392	[[ "$source_list" = LM ]] && source_list=LOCALLY_MODIFIED
	1393	[[ "$source_list" = WP ]] && source_list=WRITE_PERMIT
[1]	1394
[5]	1395	if [[ $restart_run != true ]]
[1]	1396	then
	1397	rm -rf SOURCES_FOR_RUN_$fname
	1398	mkdir SOURCES_FOR_RUN_$fname
	1399	fi
	1400
	1401
	1402	# EVTL. ZU UEBERSETZENDE PROGRAMMTEILE DADURCH BESTIMMEN, DASS GEPRUEFT
	1403	# WIRD, WELCHE DATEIEN WRITE-PERMIT BESITZEN (DATEIEN SOLLTEN DESHALB
	1404	# UNTER RCS-KONTROLLE STEHEN). MIT DER VARIABLEN EXCLUDE KOENNEN
	1405	# BESTIMMTE DATEIEN GRUNDSAETZLICH VON DER UEBERSETZUNG AUSGESCHLOSSEN
	1406	# WERDEN. DIES IST NUR BEI MANUELLEM START VON MRUN DURCH DEN BENUTZER
	1407	# MOEGLICH, DA BEI AUTOMATISCHEN RESTARTS TEST DURCH DIE TATSAECHLICH
	1408	# ZU UBERSETZENDEN DATEIEN ERSETZT IST.
	1409	# ALLE ERMITTELTEN DATEIEN WERDEN IM VERZEICHNIS SOURCES_FOR_RUN_...
	1410	# GESAMMELT
[5]	1411	if [[ "$source_list" = WRITE_PERMIT ]]
[1]	1412	then
	1413
	1414	source_list=""
	1415	cd $source_path
	1416
	1417
	1418	# ALLE MOEGLICHEN QUELLCODEDATEIEN AUFLISTEN
	1419	Names=$(ls -1 *.f90 2>&1)
	1420	[[ $(echo $Names \| grep -c '*.f90') = 0 ]] && Filenames="$Names"
	1421	Names=$(ls -1 *.F90 2>&1)
	1422	[[ $(echo $Names \| grep -c '*.F90') = 0 ]] && Filenames="$Filenames $Names"
	1423	Names=$(ls -1 *.F 2>&1)
	1424	[[ $(echo $Names \| grep -c '*.F') = 0 ]] && Filenames="$Filenames $Names"
	1425	Names=$(ls -1 *.f 2>&1)
	1426	[[ $(echo $Names \| grep -c '*.f') = 0 ]] && Filenames="$Filenames $Names"
	1427	Names=$(ls -1 *.c 2>&1)
	1428	[[ $(echo $Names \| grep -c '*.c') = 0 ]] && Filenames="$Filenames $Names"
	1429
	1430
	1431	# DATEIEN MIT WRITE-PERMIT NACH SOURCES_FOR_RUN_... KOPIEREN
	1432	for dateiname in $Filenames
	1433	do
	1434	if [[ -w $dateiname ]]
	1435	then
	1436	if [[ "$exclude" = "" \|\| $(echo $exclude \| grep -c $dateiname) = 0 ]]
	1437	then
	1438	cp $dateiname $working_directory/SOURCES_FOR_RUN_$fname
	1439	source_list=$source_list"$dateiname "
	1440	fi
	1441	fi
	1442	done
	1443
	1444	cd - > /dev/null
	1445
	1446
[5]	1447	elif [[ "$source_list" = LOCALLY_MODIFIED ]]
	1448	then
	1449
	1450	# MODIFIZIERTE DATEIEN DER SVN-ARBEITSKOPIE BESTIMMEN
	1451	source_list=""
	1452	cd $source_path
	1453
	1454
	1455	# PRUEFEN, OB VERZEICHNIS UEBERHAUPT UNTER SVN-KONTROLLE STEHT
	1456	if [[ ! -d .svn ]]
	1457	then
	1458	printf "\n\n +++ source directory"
	1459	printf "\n \"$source_path\" "
	1460	printf "\n is not under control of \"subversion\"."
	1461	printf "\n Please do not use mrun-option \"-s LOCALLY MODIFIED\"\n"
	1462	fi
	1463
	1464
	1465	# ALLE MODIFIZIERTEN QUELLCODEDATEIEN AUFLISTEN
	1466	Filenames=""
[69]	1467	svn status > tmp_mrun
	1468	while read line
[5]	1469	do
	1470	firstc=`echo $line \| cut -c1`
	1471	if [[ $firstc = M \|\| $firstc = "?" ]]
	1472	then
	1473	Name=`echo "$line" \| cut -c8-`
	1474	extension=`echo $Name \| cut -d. -f2`
	1475	if [[ "$extension" = f90 \|\| "$extension" = F90 \|\| "$extension" = f \|\| "$extension" = F \|\| "$extension" = c ]]
	1476	then
	1477	Filenames="$Filenames "$Name
	1478	fi
	1479	fi
[69]	1480	done < tmp_mrun
[5]	1481
	1482
	1483	# DATEIEN NACH SOURCES_FOR_RUN_... KOPIEREN
	1484	for dateiname in $Filenames
	1485	do
	1486	cp $dateiname $working_directory/SOURCES_FOR_RUN_$fname
	1487	source_list=$source_list"$dateiname "
	1488	done
	1489
	1490	cd - > /dev/null
	1491
	1492
[1]	1493	# MITTELS OPTION -s ANGEGEBENE DATEIEN NACH SOURCES_FOR_RUN_... KOPIEREN
	1494	# BEI AUTOMATISCHEN FORTSETZUNGSLAEUFEN SIND DORT SCHON ALLE DATEIEN
	1495	# VORHANDEN
[5]	1496	elif [[ "$source_list" != "" && $restart_run != true ]]
[1]	1497	then
	1498
	1499	cd $source_path
	1500
	1501	for filename in $source_list
	1502	do
	1503
	1504	# QUELLTEXT-DATEI DARF KEINE PFADE BEINHALTEN
	1505	if [[ $(print $filename \| grep -c "/") != 0 ]]
	1506	then
	1507	printf "\n +++ source code file: $filename"
	1508	printf "\n must not contain (\"/\") "
	1509	locat=source; exit
	1510	fi
	1511
	1512	if [[ ! -f $filename ]]
	1513	then
	1514	printf "\n +++ source code file: $filename"
	1515	printf "\n does not exist"
	1516	locat=source; exit
	1517	else
	1518	cp $filename $working_directory/SOURCES_FOR_RUN_$fname
	1519	fi
	1520
	1521	done
	1522
	1523	cd - > /dev/null
	1524
	1525	fi
	1526
	1527
	1528	# PRUEFEN, OB ENTWEDER HAUPTPROGRAMM VORHANDEN UND ES EVTL. IN DER
	1529	# LISTE DER ZU UEBERSETZENDEN PROGRAMMTEILE MIT ENTHALTEN IST (WENN
	1530	# NICHT, WIRD ES DIESER LISTE HINZUGEFUEGT)
[5]	1531	if [[ $restart_run != true ]]
[1]	1532	then
	1533
	1534	if [[ ! -f "$source_path/$mainprog" ]]
	1535	then
	1536	printf "\n\n +++ main program: $mainprog"
	1537	printf "\n does not exist in source directory"
	1538	printf "\n \"$source_path\"\n"
	1539	locat=source; exit
	1540	else
	1541	if [[ $(echo $source_list \| grep -c $mainprog) = 0 ]]
	1542	then
	1543	cp $source_path/$mainprog SOURCES_FOR_RUN_$fname
	1544	source_list=${mainprog}" $source_list"
	1545	fi
	1546	fi
	1547	fi
	1548
	1549
	1550	# DATEIEN AUS ZUSAETZLICHEM QUELLVERZEICHNIS HINZUFUEGEN
[5]	1551	if [[ $restart_run != true && "$add_source_path" != "" ]]
[1]	1552	then
	1553
	1554	# GIBT ES DAS VERZEICHNIS UEBERHAUPT?
	1555	if [[ ! -d $add_source_path ]]
	1556	then
	1557	printf "\n\n +++ WARNING: additional source code directory"
	1558	printf "\n \"$add_source_path\" "
	1559	printf "\n does not exist or is not a directory."
	1560	printf "\n No source code will be used from this directory!\n"
	1561	add_source_path=""
	1562	sleep 3
	1563	else
	1564
	1565	cd $add_source_path
	1566
	1567	Names=$(ls -1 *.f90 2>&1)
	1568	[[ $(echo $Names \| grep -c '*.f90') = 0 ]] && AddFilenames="$Names"
	1569	Names=$(ls -1 *.F90 2>&1)
	1570	[[ $(echo $Names \| grep -c '*.F90') = 0 ]] && AddFilenames="$AddFilenames $Names"
	1571	Names=$(ls -1 *.F 2>&1)
	1572	[[ $(echo $Names \| grep -c '*.F') = 0 ]] && AddFilenames="$AddFilenames $Names"
	1573	Names=$(ls -1 *.f 2>&1)
	1574	[[ $(echo $Names \| grep -c '*.f') = 0 ]] && AddFilenames="$AddFilenames $Names"
	1575	Names=$(ls -1 *.c 2>&1)
	1576	[[ $(echo $Names \| grep -c '*.c') = 0 ]] && AddFilenames="$AddFilenames $Names"
	1577
	1578	cd - > /dev/null
	1579	cd SOURCES_FOR_RUN_$fname
	1580
	1581	for dateiname in $AddFilenames
	1582	do
	1583	if [[ -f $dateiname ]]
	1584	then
	1585	printf "\n +++ source code file \"$dateiname\" found in additional"
	1586	printf "\n source code directory \"$add_source_path\" "
	1587	printf "\n as well as in directory \"$source_path\"."
	1588	locat=source; exit
	1589	fi
	1590
	1591	cp $add_source_path/$dateiname .
	1592	source_list="$source_list $dateiname"
	1593
	1594	# Default User-Interface von der Liste entfernen, falls Datei
	1595	# ein User-Interface enthaelt
	1596	if [[ $( cat $dateiname \| grep -c "END SUBROUTINE user_parin" ) != 0 ]]
	1597	then
[50]	1598	if [[ $dateiname != user_interface.f90 && -f user_interface.f90 ]]
[1]	1599	then
	1600	rm -rf user_interface.f90
	1601	source_list=`echo $source_list \| sed -e 's/user_interface.f90//'`
[50]	1602	printf "\n\n *** default \"user_interface.f90\" removed from the files to be translated"
[1]	1603	printf "\n since a user-interface is found in file"
	1604	printf "\n \"$add_source_path/$dateiname\" \n"
	1605	sleep 3
	1606	else
	1607	printf "\n\n *** user-interface file \"$dateiname\" "
	1608	printf "\n added to the files to be translated \n"
	1609	sleep 3
	1610	fi
	1611	fi
	1612	done
	1613
	1614	cd - > /dev/null
	1615	fi
	1616	fi
	1617
	1618
	1619	# ALLE UNTERPROGRAMME, DIE ZU VEREINBARTEN SOFTWAREPAKETEN GEHOEREN,
	1620	# DER LISTE DER ZU UEBERSETZENDEN DATEIEN HINZUFUEGEN
[5]	1621	if [[ $restart_run != true && -n $package_list ]]
[1]	1622	then
	1623
	1624	cd $source_path
	1625
	1626	for package in $package_list
	1627	do
	1628
	1629	[[ $package = "dvrp_graphics+1PE" ]] && package=dvrp_graphics
	1630
	1631	# ERMITTELE ALLE DATEIEN, DIE ZUM PAKET GEHOEREN
	1632	# FEHLERMELDUNGEN WERDEN ABGEFANGEN, DA * AUCH VERZEICHNISSNAMEN
	1633	# LIEFERT
	1634	package_source_list=`grep "defined( __$package " * 2>/dev/null \| cut -f1 -d:`
	1635
	1636
	1637	# FUEGE DIESE DATEIEN DER LISTE DER ZU UEBERSETZENDEN DATEIEN
	1638	# HINZU, FALLS SIE NOCH NICHT DAZUGEHOEREN
	1639	for source_list_name in $package_source_list
	1640	do
	1641	if [[ $(echo $source_list \| grep -c $source_list_name) = 0 ]]
	1642	then
	1643
	1644	# NUR DATEIEN MIT GUELTIGEN ENDUNGEN VERWENDEN
	1645	ending=`echo $source_list_name \| cut -f2 -d.`
	1646	if [[ "$ending" = f90 \|\| "$ending" = F90 \|\| "$ending" = f \|\| "$ending" = F \|\| "$ending" = c ]]
	1647	then
	1648	cp $source_list_name $working_directory/SOURCES_FOR_RUN_$fname
	1649	source_list="$source_list $source_list_name"
	1650	fi
	1651	fi
	1652	done
	1653	done
	1654
	1655	cd - > /dev/null
	1656	fi
	1657
	1658
	1659	# MAKEFILE AUF VORHANDENSEIN PRUEFEN UND KOPIEREN
	1660	# BEI RESTART-LAEUFEN LIEGT ES SCHON IM VERZEICHNIS SOURCES_FOR_RUN...
[82]	1661	if [[ "$restart_run" != true ]]
[1]	1662	then
	1663	[[ "$makefile" = "" ]] && makefile=$source_path/Makefile
	1664	if [[ ! -f $makefile ]]
	1665	then
	1666	printf "\n +++ file \"$makefile\" does not exist"
	1667	locat=make; exit
	1668	else
	1669	cp $makefile SOURCES_FOR_RUN_$fname/Makefile
	1670	fi
	1671	fi
	1672
	1673	fi # do_compile=true
	1674
	1675
	1676	# FALLS PROGRAMMTEILE UEBERSETZT WERDEN SOLLEN, FOLGEN JETZT EINIGE
	1677	# UEBERPRUEFUNGEN UND DAS SETZEN DER PRAEPROZESSOR-DIREKTIVEN
	1678	if [[ $do_compile = true ]]
	1679	then
	1680
	1681	# PRAEPROZESSOR-DIREKTIVEN ZUM SELEKTIVEN AUSWAEHLEN VON CODETEILEN
	1682	# ZUSAMMENSETZEN
[83]	1683	# DIREKTIVEN ZUM AKTIVIEREN VON RECHNERSPEZIFISCHEM CODE
[1]	1684	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
	1685	then
[82]	1686	cpp_options="${cpp_options},-D__ibm=__ibm"
[1]	1687	elif [[ $(echo $localhost \| cut -c1-3) = nec ]]
	1688	then
[82]	1689	cpp_options="$cpp_options -D__nec"
	1690	elif [[ $(echo $localhost \| cut -c1-2) = lc ]]
	1691	then
	1692	cpp_options="$cpp_options -D__lc"
[1]	1693	else
[82]	1694	cpp_options="$cpp_options -D__$localhost"
[1]	1695	fi
[83]	1696
	1697	# DIREKTIVEN DIE DURCH OPTION -K BESTIMMT WERDEN (Z.B. PARALLEL)
[1]	1698	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
	1699	then
[82]	1700	[[ -n $cond1 ]] && cpp_options="${cpp_options},-D__$cond1=__$cond1"
	1701	[[ -n $cond2 ]] && cpp_options="${cpp_options},-D__$cond2=__$cond2"
[1]	1702	else
[82]	1703	[[ -n $cond1 ]] && cpp_options="$cpp_options -D__$cond1"
	1704	[[ -n $cond2 ]] && cpp_options="$cpp_options -D__$cond2"
[1]	1705	fi
[83]	1706
	1707	# DIREKTIVEN DIE SOFTWAREPAKETE AKTIVIEREN (OPTION -p)
[1]	1708	if [[ -n $package_list ]]
	1709	then
	1710	for package in $package_list
	1711	do
	1712	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
	1713	then
	1714	if [[ $package != "dvrp_graphics+1PE" ]]
	1715	then
[82]	1716	cpp_options="${cpp_options},-D__$package=__$package"
[1]	1717	else
[82]	1718	cpp_options="${cpp_options},-D__dvrp_graphics=__dvrp_graphics"
[1]	1719	export use_seperate_pe_for_dvrp_output=true
	1720	fi
	1721	else
	1722	if [[ $package != "dvrp_graphics+1PE" ]]
	1723	then
[82]	1724	cpp_options="$cpp_options -D__$package"
[1]	1725	else
[82]	1726	cpp_options="$cpp_options -D__dvrp_graphics"
[1]	1727	export use_seperate_pe_for_dvrp_output=true
	1728	fi
	1729	fi
	1730	done
	1731	fi
[83]	1732
	1733	# DIREKTIVEN DIE DURCH OPTION -D FESTGELEGT SIND
[1]	1734	if [[ -n $cpp_opts ]]
	1735	then
	1736	for popts in $cpp_opts
	1737	do
[82]	1738	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
	1739	then
	1740	cpp_options="${cpp_options},-D__$popts=__$popts"
	1741	else
	1742	cpp_options="$cpp_options -D__$popts"
	1743	fi
[1]	1744	done
	1745	fi
	1746
	1747	else
	1748
	1749
	1750	# BEI LOKALEN RECHNUNGEN PRUEFEN, OB EXECUTABLE VORHANDEN
	1751	if [[ $do_remote = false ]]
	1752	then
	1753	if [[ ! -f $executable ]]
	1754	then
	1755	printf "\n +++ executable file: $executable"
	1756	printf "\n does not exist"
	1757	locat=executable; exit
	1758	fi
	1759	fi
	1760	fi
	1761
	1762
	1763	# JOBMODUS FESTSTELLEN
	1764	if [[ "$ENVIRONMENT" = BATCH && $localhost != lctit \|\| "$QUEUE" != interactive && $localhost = lctit ]]
	1765	then
	1766	jobmo=BATCH
	1767	else
	1768	jobmo=INTERACTIVE
	1769	fi
	1770
	1771
	1772	# HOSTSPEZIFISCHE DEFAULT-COMPILER SETZEN, FALLS NICHT BEREITS
	1773	# DURCH BENUTZER ANDERWEITIG VEREINBART
	1774	if [[ "$compiler_name" = "" ]]
	1775	then
[82]	1776
	1777	printf "\n +++ no compiler specified for \"$localhost $cond1 $cond2\""
	1778	locat=compiler_name; exit
	1779
[1]	1780	fi
	1781
	1782
	1783	# COMPILER AUF NECK UEBERSCHREIBEN
	1784	[[ $localhost = neck ]] && compiler_name=mpif90
	1785
	1786
	1787
	1788	# TEMPORAEREN KATALOGNAMEN BESTIMMEN
	1789	kennung=$RANDOM
	1790	if [[ "$tmp_user_catalog" = "" ]]
	1791	then
	1792	if [[ $localhost = ibmb \|\| $localhost = ibmh ]]
	1793	then
	1794	tmp_user_catalog=$TMPDIR
	1795	elif [[ $localhost = nech ]]
	1796	then
	1797	tmp_user_catalog=$WRKSHR
	1798	else
	1799	tmp_user_catalog=/tmp
	1800	fi
	1801	fi
	1802	TEMPDIR=$tmp_user_catalog/${usern}.$kennung
	1803
	1804
	1805	# KATALOGNAMEN FUER ZWISCHENSPEICHERUNG VON FORTSETZUNGSLAUFDATEIEN
	1806	# BESTIMMEN
	1807	if [[ "$tmp_data_catalog" = "" ]]
	1808	then
	1809	if [[ $localhost = ibmb \|\| $localhost = ibmh ]]
	1810	then
	1811	tmp_data_catalog=$WORK/mrun_restart_data
	1812	elif [[ $localhost = nech ]]
	1813	then
	1814	tmp_data_catalog=$WRKSHR/mrun_restart_data
	1815	else
	1816	tmp_data_catalog=/tmp/mrun_restart_data
	1817	fi
	1818	fi
	1819
	1820
	1821	# EVENTUELL BEI LOKALEN RECHNUNGEN $-ZEICHEN IN ENVIRONMENT-VARIABLEN
	1822	# ERSETZEN
	1823	if [[ $do_remote = false && $do_compile = true ]]
	1824	then
	1825	eval fopts=\"$fopts\"
	1826	eval lopts=\"$lopts\"
	1827	fi
	1828
	1829
	1830
	1831	# COMPILE- UND LINK-OPTIONEN BESTIMMEN
[82]	1832	fopts="$fopts $netcdf_inc $dvrp_inc"
	1833	lopts="$lopts $netcdf_lib $dvrp_lib"
[1]	1834	ROPTS="$ropts"
[179]	1835	if [[ ( $(echo $host \| cut -c1-3) = nec \|\| $(echo $host \| cut -c1-3) = ibm \|\| $host = lcsgih \|\| $host = lcsgib \|\| $host = lctit \|\| $host = lcfimm \|\| $host = lcxt4 ) && -n $numprocs ]]
[1]	1836	then
	1837	XOPT="-X $numprocs"
	1838	fi
	1839
	1840
	1841
	1842	# PRUEFEN DER CPU-ZEIT. (CPUMAX WIRD ALS ENV-VARIABLE VOM HAUTPRO-
	1843	# GRAMM BENOETIGT
	1844	done=false
	1845	while [[ $done = false ]]
	1846	do
	1847	cputime=$cpumax
	1848	if (( $cputime == 0 ))
	1849	then
	1850	printf "\n +++ cpu-time is undefined"
	1851	printf "\n >>> Please type CPU-time in seconds as INTEGER:"
	1852	printf "\n >>> "
	1853	read cputime 1>/dev/null 2>&1
	1854	else
	1855	done=true
	1856	fi
	1857	cpumax=$cputime
	1858	done
	1859
	1860	(( minuten = cputime / 60 ))
	1861	(( sekunden = cputime - minuten * 60 ))
	1862
	1863
	1864	# PRUEFEN DER KERNSPEICHERANFORDERUNG
	1865	if [[ $do_batch = true ]]
	1866	then
	1867	done=false
	1868	while [[ $done = false ]]
	1869	do
	1870	if (( memory == 0 ))
	1871	then
	1872	printf "\n +++ memory demand is undefined"
	1873	printf "\n >>> Please type memory in MByte per process as INTEGER:"
	1874	printf "\n >>> "
	1875	read memory 1>/dev/null 2>&1
	1876	else
	1877	done=true
	1878	fi
	1879	done
	1880	fi
	1881
	1882
	1883	# PRUEFEN, OB FUER REMOTE-RECHNUNGEN EIN BENUTZERNAME ANGEGEBEN WURDE
	1884	if [[ $do_remote = true && -z $remote_username ]]
	1885	then
	1886	while [[ -z $remote_username ]]
	1887	do
	1888	printf "\n +++ username on remote host \"$host\" is undefined"
	1889	printf "\n >>> Please type username:"
	1890	printf "\n >>> "
	1891	read remote_username
	1892	done
	1893	mc="$mc -u$remote_username"
	1894	fi
	1895
	1896	###########################################################################
	1897	# HEADER-AUSGABE
	1898	###########################################################################
	1899
	1900
	1901	calltime=$(date)
	1902	printf "\n"
	1903	# [[ $silent = false ]] && clear
	1904	printf "#--------------------------------------------------------------# \n"
	1905	printf "\| $version$calltime \| \n"
	1906	printf "\| \| \n"
	1907	spalte1="called on:"; spalte2=$localhost_realname
	1908	printf "\| $spalte1$spalte2 \| \n"
	1909	if [[ $local_compile = false ]]
	1910	then
	1911	if [[ $do_remote = true ]]
	1912	then
	1913	spalte1="execution on:"; spalte2="$host (username: $remote_username)"
	1914	else
	1915	spalte1="execution on:"; spalte2="$host ($localhost_realname)"
	1916	fi
	1917	else
	1918	spalte1="compiling test only!"; spalte2=""
	1919	fi
	1920	printf "\| $spalte1$spalte2 \| \n"
	1921	if [[ -n $numprocs ]]
	1922	then
	1923	spalte1="number of PEs:"; spalte2=$numprocs
	1924	printf "\| $spalte1$spalte2 \| \n"
	1925	fi
	1926	if [[ -n $tasks_per_node ]]
	1927	then
	1928	spalte1="tasks per node:"; spalte2="$tasks_per_node (number of nodes: $nodes)"
	1929	printf "\| $spalte1$spalte2 \| \n"
	1930	fi
	1931	if [[ $threads_per_task != 1 ]]
	1932	then
	1933	spalte1="threads per task:"; spalte2="$threads_per_task"
	1934	printf "\| $spalte1$spalte2 \| \n"
	1935	fi
	1936	printf "\| \| \n"
	1937	if [[ $do_compile = true ]]
	1938	then
[82]	1939	spalte1=cpp-directives:; spalte2=$cpp_options
[1]	1940	printf "\| $spalte1$spalte2 \| \n"
[82]	1941	zeile=$(echo "$cpp_options" \| cut -c41-)
[1]	1942	while [[ "$zeile" != "" ]]
	1943	do
	1944	spalte1=""
	1945	spalte2=$zeile
	1946	printf "\| $spalte1$spalte2 \| \n"
	1947	zeile=$(echo "$zeile" \| cut -c41-)
	1948	done
	1949
[82]	1950	spalte1=compiler-options:; spalte2="$fopts"
[1]	1951	printf "\| $spalte1$spalte2 \| \n"
[82]	1952	zeile=$(echo "$fopts" \| cut -c41-)
[1]	1953	while [[ "$zeile" != "" ]]
	1954	do
	1955	spalte1=""
	1956	spalte2=$zeile
	1957	printf "\| $spalte1$spalte2 \| \n"
	1958	zeile=$(echo "$zeile" \| cut -c41-)
	1959	done
	1960
[82]	1961	spalte1=linker-options:; spalte2=$lopts
[1]	1962	printf "\| $spalte1$spalte2 \| \n"
[82]	1963	zeile=$(echo "$lopts" \| cut -c41-)
[1]	1964	while [[ "$zeile" != "" ]]
	1965	do
	1966	spalte1=""
	1967	spalte2=$zeile
	1968	printf "\| $spalte1$spalte2 \| \n"
	1969	zeile=$(echo "$zeile" \| cut -c41-)
	1970	done
	1971
	1972	spalte1="main program":; spalte2=$mainprog
	1973	printf "\| $spalte1$spalte2 \| \n"
	1974	else
	1975	spalte1=executable:; spalte2=$executable
	1976	printf "\| $spalte1$spalte2 \| \n"
	1977	fi
	1978	printf "\| \| \n"
	1979	spalte1="base name of files":; spalte2=$fname
	1980	printf "\| $spalte1$spalte2 \| \n"
	1981	if [[ $fname != $afname ]]
	1982	then
	1983	spalte1="base name of input files":; spalte2=$afname
	1984	printf "\| $spalte1$spalte2 \| \n"
	1985	fi
	1986	spalte1="INPUT control list":; spalte2=$input_list
	1987	printf "\| $spalte1$spalte2 \| \n"
	1988	spalte1="OUTPUT control list":; spalte2=$output_list
	1989	printf "\| $spalte1$spalte2 \| \n"
	1990
	1991	if [[ $do_batch = true \|\| "$LOADLBATCH" = yes ]]
	1992	then
	1993	spalte1="memory demand / PE":; spalte2="$memory MB"
	1994	printf "\| $spalte1$spalte2 \| \n"
	1995	spalte1=CPU-time:; spalte2="$minuten:$sekunden"
	1996	printf "\| $spalte1$spalte2 \| \n"
	1997	fi
	1998
	1999	if [[ $do_compile = true ]]
	2000	then
	2001	printf "\| \| \n"
	2002	printf "\| Files to be compiled: \| \n"
	2003	zeile=$source_list
	2004	while [[ "$zeile" != "" ]]
	2005	do
	2006	spalte3=$zeile
	2007	printf "\| $spalte3 \| \n"
	2008	zeile=$(echo "$zeile" \| cut -c61-)
	2009	done
	2010	fi
	2011	printf "#--------------------------------------------------------------#"
	2012
	2013
	2014
	2015	# BEDINGTE AUSGABE DER DATEIVERBINDUNGEN
	2016	if [[ $do_trace = true ]]
	2017	then
	2018	(( i = 0 ))
	2019	while (( i < iin ))
	2020	do
	2021	(( i = i + 1 ))
	2022	if (( i == 1 ))
	2023	then
	2024	printf "\n\n >>> INPUT-file assignments:\n"
	2025	fi
	2026	printf "\n ${localin[$i]} : ${absnamein[$i]}"
	2027	done
	2028	(( i = 0 ))
	2029	while (( i < iout ))
	2030	do
	2031	(( i = i + 1 ))
	2032	if (( i == 1 ))
	2033	then
	2034	printf "\n\n >>> OUTPUT-file assignments:\n"
	2035	fi
	2036	printf "\n ${localout[$i]} : ${pathout[$i]}"
	2037	done
	2038	(( i = 0 ))
	2039	while (( i < iic ))
	2040	do
	2041	(( i = i + 1 ))
	2042	if (( i == 1 ))
	2043	then
	2044	printf "\n\n >>> INPUT-commands:\n"
	2045	fi
	2046	printf "\n ${in_command[$i]}"
	2047	done
	2048	(( i = 0 ))
	2049	while (( i < ioc ))
	2050	do
	2051	(( i = i + 1 ))
	2052	if (( i == 1 ))
	2053	then
	2054	printf "\n\n >>> OUTPUT-commands:\n"
	2055	fi
	2056	printf "\n ${out_command[$i]}"
	2057	done
	2058	fi
	2059
	2060
	2061	# ABFRAGEN BEI AUFRUF AUF LOKALER MASCHINE
	2062	if [[ $remotecall = false && $silent = false && $jobmo != BATCH ]]
	2063	then
	2064	antwort=dummy
	2065	printf "\n\n"
	2066	while [[ "$antwort" != y && "$antwort" != Y && "$antwort" != n && "$antwort" != N ]]
	2067	do
	2068	printf " >>> everything o.k. (y/n) ? "
	2069	read antwort
	2070	done
	2071	if [[ $antwort = n \|\| $antwort = N ]]
	2072	then
	2073	locat=user_abort; (( iec = 0 )); exit
	2074	fi
	2075	if [[ $do_batch = true ]]
	2076	then
	2077	printf " >>> batch-job will be created and submitted"
	2078	else
	2079	if [[ $local_compile = false ]]
	2080	then
	2081	printf " >>> MRUN will now continue to execute on this machine"
	2082	else
	2083	printf " >>> a test compilation will now be carried out on this machine"
	2084	fi
	2085	fi
	2086	fi
	2087
	2088
	2089
	2090
	2091	# FALLS AUF DIESER MASCHINE GERECHNET WERDEN SOLL, WERDEN JETZT ENTSPRE-
	2092	# CHENDE AKTIONEN DURCHGEFUEHRT
	2093	if [[ $do_batch = false ]]
	2094	then
	2095
	2096
	2097	# TEMPORAEREN KATALOG ERZEUGEN
	2098	mkdir -p $TEMPDIR
	2099	chmod go+rx $TEMPDIR
	2100	tmpcreate=true
	2101
	2102
	2103	# SAEMTLICHE QUELLTEXT-DATEIEN BZW. AUSFUEHRBARES PROGRAMM IN
	2104	# TEMPORAERES VERZEICHNIS KOPIEREN
	2105	if [[ $do_compile = true ]]
	2106	then
	2107
	2108	# ON NEC, COMPILATION IS DONE ON HOST CROSS VIA CROSS COMPILING
	2109	# CREATE A TEMPORARY DIRECTORY ON THAT MACHINE (HOME MOUNTED VIA NFS)
	2110	if [[ $localhost = nech ]]
	2111	then
	2112	TEMPDIR_COMPILE=$HOME/work/${usern}.$kennung
	2113	if mkdir -p $TEMPDIR_COMPILE
	2114	then
	2115	printf "\n *** \"$TEMPDIR_COMPILE\" "
	2116	printf "\n is generated as temporary directory for cross compiling\n"
	2117	else
	2118	printf "\n +++ creating directory \"$TEMPDIR_COMPILE\" "
	2119	printf "\n needed for cross compilation failed"
	2120	locat=compile
	2121	exit
	2122	fi
	2123	else
	2124	TEMPDIR_COMPILE=$TEMPDIR
	2125	fi
	2126
	2127
[82]	2128	# PFADNAMEN FUER DAS MAKE-DEPOSITORY ERMITTELN
	2129	line=""
	2130	grep "%depository_path" $config_file > tmp_mrun
	2131	while read line
	2132	do
	2133	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
	2134	then
	2135	if [[ "$(echo $line \| cut -d" " -s -f3)" = "" ]]
[1]	2136	then
[82]	2137	global_depository_path=`echo $line \| cut -d" " -s -f2`
[1]	2138	fi
[82]	2139	fi
	2140	done < tmp_mrun
[1]	2141
[82]	2142	line=""
	2143	grep " $localhost" $config_file \| grep "%depository_path" > tmp_mrun
	2144	while read line
	2145	do
	2146	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
[1]	2147	then
[82]	2148	local_depository_path=`echo $line \| cut -d" " -s -f2`
[1]	2149	fi
[82]	2150	done < tmp_mrun
[1]	2151
[82]	2152	if [[ "$local_depository_path" = "" ]]
	2153	then
	2154	if [[ "$global_depository_path" != "" ]]
[1]	2155	then
[82]	2156	local_depository_path=$global_depository_path
[1]	2157	else
[82]	2158	printf "\n\n +++ no depository path found in configuration file"
	2159	printf "\n for local host \"$localhost\" "
	2160	printf "\n please set \"\%depository_path\" in configuration file\n"
	2161	locat=config_file; exit
[1]	2162	fi
[82]	2163	fi
	2164	eval local_depository_path=$local_depository_path
[1]	2165
[82]	2166	basename=`print $mainprog \| cut -f1 -d"."`
	2167	eval make_depository=${local_depository_path}/${basename}_current_version.tar
	2168	if [[ ! -f $make_depository ]]
	2169	then
	2170	printf "\n"
	2171	printf "\n *** WARNING: make depository \"$make_depository\" not found"
	2172	printf "\n \"make\" will fail, if the Makefile or other source files are missing\n"
	2173	else
	2174	cp $make_depository $TEMPDIR_COMPILE
[1]	2175	cd $TEMPDIR_COMPILE
[82]	2176	tar -xf $make_depository > /dev/null 2>&1
[1]	2177	cd - > /dev/null
	2178	fi
[82]	2179
	2180	cp SOURCES_FOR_RUN_$fname/* $TEMPDIR_COMPILE
	2181
	2182	# FALLS USER-INTERFACE VORHANDEN UND AUF DATEI MIT ANDEREM NAMEN
	2183	# ALS user_interface.f90 LIEGT, DIESEN GEAENDERTEN NAMEN INS
	2184	# MAKEFILE EINTRAGEN
	2185	cd $TEMPDIR_COMPILE
	2186	interface_file=`grep -l "END SUBROUTINE user_parin" $source_list`
	2187	if [[ "$interface_file" != "" ]]
	2188	then
	2189	interface_file=`echo $interface_file \| cut -d"." -f1`
	2190	mv Makefile Makefile_old
	2191	sed "s/user_interface/$interface_file/g" Makefile_old > Makefile
	2192	fi
	2193	cd - > /dev/null
[1]	2194	else
	2195	cp $executable ${TEMPDIR}/a.out
	2196	fi
	2197
	2198
	2199	# WECHSEL IN TEMPORAEREN KATALOG
	2200	cd $TEMPDIR
	2201	printf "\n *** changed to temporary directory: $TEMPDIR"
	2202
	2203
	2204	# OUTPUT-DATEI-VERBINDUNGEN AUF TEMPORAERER DATEI ABLEGEN
	2205	# DIESE DATEI KANN VON SPAETER AUFZURUFENDEN BENUTZERPROZEDUREN GELESEN
	2206	# WERDEN, UM ZU LOKALEN DATEINAMEN GEHOERENDE PERMANENTE NAMEN ZU
	2207	# ERMITTELN
	2208	(( i = 0 ))
	2209	while (( i < iout ))
	2210	do
	2211	(( i = i + 1 ))
	2212	if [[ "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = tra \|\| "${actionout[$i]}" = trpe ]]
	2213	then
	2214	printf "${localout[$i]} ${actionout[$i]}\n${pathout[$i]}\n${localhost}_${fname}${endout[$i]}\n" >> OUTPUT_FILE_CONNECTIONS
	2215	else
	2216	printf "${localout[$i]} ${actionout[$i]}\n${pathout[$i]}\n${frelout[$i]}\n" >> OUTPUT_FILE_CONNECTIONS
	2217	fi
	2218	done
	2219
	2220
	2221	# EVTL. UEBERSETZUNGSAKTIONEN STARTEN
	2222	if [[ $do_compile = true ]]
	2223	then
	2224
	2225
	2226	# COMPILING WITH MAKE (ON NEC COMPILER IS CALLED ON HOST CROSS)
[82]	2227	printf "\n\n\n *** compilation starts \n$striche\n"
	2228	printf " *** compilation with make using following options:\n"
	2229	printf " compilername: $compiler_name\n"
	2230	printf " options: $fopts\n"
	2231	printf " preprocessor-directives: $cpp_options \n"
	2232	printf " linker-options: $lopts \n"
	2233	printf " source code files: $source_list \n"
	2234
	2235	if [[ $localhost = nech ]]
[1]	2236	then
[82]	2237	ssh 136.172.44.192 -l $usern ". /SX/opt/etc/initsx.sh; cd \$HOME/work/${usern}.$kennung; sxmake -f Makefile PROG=a.out F90=$compiler_name COPT=\"$cpp_options\" F90FLAGS=\"$fopts\" LDFLAGS=\"$lopts\" "
	2238	cp $TEMPDIR_COMPILE/a.out .
	2239	[[ $? != 0 ]] && compile_error=true
	2240	rm -rf $TEMPDIR_COMPILE
[1]	2241	else
[118]	2242	[[ $localhost = lctit ]] && export LM_LICENSE_FILE=27050@tggls
[82]	2243	make -f Makefile PROG=a.out F90=$compiler_name COPT="$cpp_options" F90FLAGS="$fopts" LDFLAGS="$lopts"
	2244	fi
[1]	2245
	2246	if [[ $? != 0 \|\| "$compile_error" = true \|\| "$module_compile_error" = true ]]
	2247	then
	2248	printf "\n +++ error occured while compiling or linking"
	2249	locat=compile
[181]	2250
	2251	# WORKAROUND: REMOVE IF LATER, BUT KEEP THE EXIT!
	2252	if [[ $localhost != lcsgib && $localhost != lcsgih ]]
	2253	then
	2254	exit
	2255	fi
[1]	2256	else
	2257	printf "$striche\n *** compilation finished \n"
	2258	fi
	2259	fi
	2260
	2261
	2262	# FALLS NUR TESTWEISE KOMPILIERT WERDEN SOLLTE, IST MRUN JETZT FERTIG
	2263	if [[ $local_compile = true ]]
	2264	then
	2265	cd $HOME
	2266	rm -rf $TEMPDIR
	2267	locat=local_compile; exit
	2268	fi
	2269
	2270
	2271	# BEREITSTELLEN DER INPUT-DATEIEN
	2272	# SCHLEIFE UEBER ALLE VOM BENUTZER ANGEGEBENEN DATEIEN
	2273	(( i = 0 ))
	2274	while (( i < iin ))
	2275	do
	2276	(( i = i + 1 ))
	2277	if (( i == 1 ))
	2278	then
	2279	printf "\n\n *** providing INPUT-files:\n$striche"
	2280	fi
	2281
	2282
	2283	# OPTIONALE DATEIEN BEI NICHTVORHANDENSEIN UEBERGEHEN
	2284	if [[ "${transin[$i]}" = unavailable ]]
	2285	then
	2286	if [[ "${extin[$i]}" = "" \|\| "${extin[$i]}" = " " ]]
	2287	then
	2288	printf "\n +++ WARNING: input file \"${pathin[$i]}/${afname}${endin[$i]}\" "
	2289	printf "\n is not available!"
	2290	else
	2291	printf "\n +++ WARNING: input file \"${pathin[$i]}/${afname}${endin[$i]}.${extin[$i]}\" "
	2292	printf "\n is not available!"
	2293	fi
	2294	continue
	2295	fi
	2296
	2297	# PRUEFEN, OB EINZELDATEI ODER DATEI PRO PROZESSOR
	2298	files_for_pes=false; datentyp=file
	2299	if [[ "${actionin[$i]}" = pe && -n $numprocs ]]
	2300	then
	2301	files_for_pes=true; datentyp=directory
	2302	actionin[$i]=""
	2303	elif [[ "${actionin[$i]}" = pe && ! -n $numprocs ]]
	2304	then
	2305	actionin[$i]=""
	2306	elif [[ "${actionin[$i]}" = arpe && -n $numprocs ]]
	2307	then
	2308	files_for_pes=true; datentyp=directory
	2309	actionin[$i]="ar"
	2310	elif [[ "${actionin[$i]}" = arpe && ! -n $numprocs ]]
	2311	then
	2312	actionin[$i]="ar"
	2313	elif [[ "${actionin[$i]}" = flpe && -n $numprocs ]]
	2314	then
	2315	files_for_pes=true; datentyp=directory
	2316	actionin[$i]="fl"
	2317	elif [[ "${actionin[$i]}" = flpe && ! -n $numprocs ]]
	2318	then
	2319	actionin[$i]="fl"
	2320	fi
	2321
	2322	if [[ $files_for_pes = true ]]
	2323	then
	2324	printf "\n >>> INPUT: ${absnamein[$i]}/.... to ${localin[$i]}"
	2325	else
	2326	printf "\n >>> INPUT: ${absnamein[$i]} to ${localin[$i]}"
	2327	fi
	2328
	2329	# INPUT-DATEI FUER EINEN FORTSETZUNGSLAUF. ES WIRD GEPRUEFT,
	2330	# OB DIESE DATEI NOCH AUF DEM TEMPORAEREN DATENKATALOG VORHANDEN
	2331	# IST. FALLS NICHT, WIRD VERSUCHT, SIE ANSCHLIESSEND VOM ARCHIV-
	2332	# SERVER ZU HOLEN
	2333	if [[ "${actionin[$i]}" = fl ]]
	2334	then
	2335	printf "\n $datentyp will be fetched from temporary directory \"${tmp_data_catalog}\" !"
	2336	if [[ $files_for_pes = false ]]
	2337	then
	2338	if [[ -f "$tmp_data_catalog/${frelin[$i]}" ]]
	2339	then
	2340	ln $tmp_data_catalog/${frelin[$i]} ${localin[$i]}
	2341	got_tmp[$i]=true
	2342	elif [[ -f "$WORK/${frelin[$i]}" && $ignore_archive_error = true ]]
	2343	then
	2344	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" !"
	2345	printf "\n *** trying to use backup copy in \"$WORK\" "
	2346	cp $WORK/${frelin[$i]} ${localin[$i]}
	2347	else
	2348	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" "
	2349	printf "\n or \"$tmp_data_catalog\" does not exist!"
	2350	printf "\n *** trying to get copy from archive"
	2351	actionin[$i]=ar
	2352	fi
	2353	else
	2354	if [[ -d "$tmp_data_catalog/${frelin[$i]}" ]]
	2355	then
	2356	mkdir ${localin[$i]}
[149]	2357	cd $tmp_data_catalog/${frelin[$i]}
	2358	for file in $(ls *)
	2359	do
	2360	ln $file $TEMPDIR/${localin[$i]}
	2361	done
	2362	cd $TEMPDIR
[1]	2363	got_tmp[$i]=true
	2364	elif [[ -d "$WORK/${frelin[$i]}" && $ignore_archive_error = true ]]
	2365	then
	2366	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" !"
	2367	printf "\n *** trying to use backup copy in \"$WORK\" "
	2368	cp -r $WORK/${frelin[$i]} ${localin[$i]}
	2369	else
	2370	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" "
	2371	printf "\n or \"$tmp_data_catalog\" does not exist!"
	2372	printf "\n *** trying to get copy from archive"
	2373	actionin[$i]=ar
	2374	fi
	2375	fi
	2376	fi
	2377
	2378
	2379	# DATEI LIEGT AUF ARCHIV-SERVER
	2380	if [[ "${actionin[$i]}" = ar ]]
	2381	then
	2382
	2383	if [[ $files_for_pes = false ]]
	2384	then
	2385	printf "\n file will be restored from archive-system ($archive_system)!"
	2386	else
	2387	printf "\n directory will be restored from archive-system ($archive_system)!"
	2388	fi
	2389
	2390	file_restored=false
	2391
	2392	if [[ $archive_system = asterix ]]
	2393	then
	2394	do_stagein=true
	2395	(( stagein_anz = 0 ))
	2396	while [[ $do_stagein = true ]]
	2397	do
	2398	if [[ $files_for_pes = false ]]
	2399	then
	2400	stagein -O ${frelin[$i]} > STAGEIN_OUTPUT
	2401	else
	2402	stagein -t -O ${frelin[$i]} > STAGEIN_OUTPUT
	2403	fi
	2404	cat STAGEIN_OUTPUT
	2405	if [[ $(grep -c "st.msg:i24" STAGEIN_OUTPUT) != 0 ]]
	2406	then
	2407	file_restored=true
	2408	do_stagein=false
	2409	else
	2410	(( stagein_anz = stagein_anz + 1 ))
	2411	if (( stagein_anz == 10 ))
	2412	then
	2413	printf "\n +++ stagein stoped after 10 tries"
	2414	locat=stage
	2415	exit
	2416	fi
	2417	printf "\n +++ restoring from archive failed, trying again:"
	2418	sleep 900
	2419	fi
	2420	done
	2421	elif [[ $archive_system = DMF ]]
	2422	then
	2423	if [[ $files_for_pes = false ]]
	2424	then
	2425	printf "\n +++ restoring of single files impossible with $archive_system !\n"
	2426	locat=DMF
	2427	exit
	2428	else
	2429	find $ARCHIVE/${frelin[$i]} -type m -print \| dmget
	2430	cp -r $ARCHIVE/${frelin[$i]} $PWD
	2431	file_restored=true
	2432	fi
	2433	elif [[ $archive_system = tivoli ]]
	2434	then
	2435	if [[ $files_for_pes = false ]]
	2436	then
	2437	if [[ $localhost = ibmh ]]
	2438	then
	2439	ssh $usern@hdata.hlrn.de "cp $PERM/${frelin[$i]} $PWD"
	2440	else
	2441	ssh $usern@bdata.hlrn.de "cp $PERM/${frelin[$i]} $PWD"
	2442	fi
	2443	else
	2444	(( inode = 0 ))
	2445	while (( inode < nodes ))
	2446	do
	2447	if [[ $localhost = ibmh ]]
	2448	then
	2449	ssh $usern@hdata.hlrn.de "cd $PWD; tar xf $PERM/${frelin[$i]}/${frelin[$i]}.node_$inode.tar"
	2450	else
	2451	ssh $usern@bdata.hlrn.de "cd $PWD; tar xf $PERM/${frelin[$i]}/${frelin[$i]}.node_$inode.tar"
	2452	fi
	2453	(( inode = inode + 1 ))
	2454	done
	2455	fi
	2456	file_restored=true
	2457	elif [[ $archive_system = ut ]]
	2458	then
	2459	if [[ $files_for_pes = false ]]
	2460	then
	2461	cp $UT/${frelin[$i]} .
	2462	else
	2463	(( inode = 0 ))
	2464	while (( inode < nodes ))
	2465	do
	2466	tar xf $UT/${frelin[$i]}/${frelin[$i]}.node_$inode.tar
	2467	(( inode = inode + 1 ))
	2468	done
	2469	fi
	2470	file_restored=true
	2471	else
	2472	printf "\n +++ archive_system=\"$archive_system\" restore impossible!"
	2473	locat=rearchive
	2474	exit
	2475	fi
	2476
	2477	if [[ $file_restored = true ]]
	2478	then
	2479
	2480	# DATEI AUCH AUF TEMPORAERES DATENVERZEICHNIS LEGEN, DAMIT
	2481	# SIE BEI WEITEREN ZUGRIFFEN NOCH VORHANDEN IST
	2482	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog; chmod g+rx $tmp_data_catalog
	2483	if [[ $files_for_pes = false ]]
	2484	then
	2485	ln -f ${frelin[$i]} $tmp_data_catalog/${frelin[$i]}
	2486	else
	2487	mkdir $tmp_data_catalog/${frelin[$i]}
	2488	ln -f ${frelin[$i]}/* $tmp_data_catalog/${frelin[$i]}
	2489	fi
	2490	got_tmp[$i]=true
	2491
	2492	# DATEI UNTER LOKALEM NAMEN ZUR VERFUEGUNG STELLEN
	2493	mv ${frelin[$i]} ${localin[$i]}
	2494
	2495	fi
	2496	fi
	2497
	2498
	2499	# DATEI LIEGT IM VOM BENUTZER ANGEGEBENEN VERZEICHNIS
	2500	if [[ "${actionin[$i]}" = "" \|\| "${actionin[$i]}" = "di" \|\| "${actionin[$i]}" = "npe" ]]
	2501	then
	2502
	2503	if [[ "${actionin[$i]}" = "npe" && -n $numprocs ]]
	2504	then
	2505
	2506	# DATEI WIRD FUER DIE PROZESSOREN EINES PARALLERECHNERS BEREITGESTELLT
	2507	printf "\n file will be provided for $numprocs processors"
	2508	mkdir ${localin[$i]}
	2509	ival=$numprocs
	2510	(( ii = 0 ))
	2511	while (( ii <= ival-1 ))
	2512	do
	2513	if (( ii < 10 ))
	2514	then
	2515	cp ${absnamein[$i]} ${localin[$i]}/_000$ii
	2516	elif (( ii < 100 ))
	2517	then
	2518	cp ${absnamein[$i]} ${localin[$i]}/_00$ii
	2519	elif (( ii < 1000 ))
	2520	then
	2521	cp ${absnamein[$i]} ${localin[$i]}/_0$ii
	2522	else
	2523	cp ${absnamein[$i]} ${localin[$i]}/_$ii
	2524	fi
	2525	(( ii = ii + 1 ))
	2526	done
	2527
	2528	else
	2529
	2530	if [[ $files_for_pes = true ]]
	2531	then
	2532
	2533	# DIE DEN PROZESSOREN EINES PARALLELRECHNERS ZUGEHOERIGEN
	2534	# DATEIEN WERDEN BEREITGESTELLT, INDEM ZUERST DER GESAMTE
	2535	# KATALOGINHALT KOPIERT UND DANN DIE EINZELNEN DATEIEN
	2536	# PER MOVE UMBENANNT WERDEN
	2537	printf "\n providing $numprocs files for the respective processors"
	2538	mkdir ${localin[$i]}
	2539	cp -r ${absnamein[$i]}/* ${localin[$i]}
	2540
	2541	else
	2542	# BEREITSTELLUNG AUF EINPROZESSORRECHNERN
	2543	cp ${absnamein[$i]} ${localin[$i]}
	2544	fi
	2545	fi
	2546	fi
	2547
	2548	done
	2549	if (( i != 0 ))
	2550	then
	2551	printf "\n$striche\n *** all INPUT-files provided \n"
	2552	fi
	2553
	2554
	2555	# NAMELIST-DATEI MIT WERTEN VON ENVIRONMENT-VARIABLEN ERZEUGEN (ZU
	2556	# LESEN VON PALM)
	2557	cat > ENVPAR << %%END%%
	2558	&envpar run_identifier = '$fname', host = '$localhost',
	2559	write_binary = '$write_binary', tasks_per_node = $tasks_per_node,
[75]	2560	maximum_cpu_time_allowed = ${cpumax}.,
	2561	revision = '$global_revision' /
[1]	2562
	2563	%%END%%
	2564
	2565
	2566	# EVENTUELLE INPUT-KOMMANDOS ABARBEITEN
	2567	(( i = 0 ))
	2568	while (( i < iic ))
	2569	do
	2570	(( i = i + 1 ))
	2571	if (( i == 1 ))
	2572	then
	2573	printf "\n\n *** execution of INPUT-commands:\n$striche"
	2574	fi
	2575	printf "\n >>> ${in_command[$i]}"
	2576	eval ${in_command[$i]}
	2577	if (( i == iic ))
	2578	then
	2579	printf "\n$striche\n"
	2580	fi
	2581	done
	2582
	2583
	2584	# VERBLEIBENDE CPU-ZEIT BERECHNEN
	2585	cpurest=${cpumax}.
	2586
	2587
	2588	# PROGRAMMSTART
	2589	printf "\n\n *** execution starts in directory\n \"`pwd`\"\n$striche\n"
	2590	PATH=$PATH:$TEMPDIR
	2591
	2592	if [[ "$cond1" = debug \|\| "$cond2" = debug ]]
	2593	then
	2594	if [[ "$ENVIRONMENT" = BATCH ]]
	2595	then
	2596	printf "\n +++ debug is allowed in interactive mode only"
	2597	locat=debug
	2598	exit
	2599	fi
[5]	2600	if [[ $localhost = decalpha ]]
[1]	2601	then
	2602	dxladebug a.out
	2603	elif [[ $localhost = ibmb \|\| $localhost = ibmh ]]
	2604	then
	2605
	2606	# SETUP THE IBM MPI ENVIRONMENT
	2607	export MP_SHARED_MEMORY=yes
	2608	export AIXTHREADS_SCOPE=S
	2609	export OMP_NUM_THREADS=$threads_per_task
	2610	export AUTHSTATE=files
	2611	export XLFRTEOPTS="nlwidth=132:err_recovery=no" # RECORD-LENGTH OF NAMELIST-OUTPUT
	2612
	2613	# FOLLOWING OPTIONS ARE MANDATORY FOR TOTALVIEW
	2614	export MP_ADAPTER_USE=shared
	2615	export MP_CPU_USE=multiple
	2616	export MP_TIMEOUT=1200
	2617
	2618	unset MP_TASK_AFFINITY
	2619
	2620	# SO FAR, TOTALVIEW NEEDS HOSTFILE MECHANISM FOR EXECUTION
	2621	#(( ii = 1 ))
	2622	#while (( ii <= $numprocs ))
	2623	#do
	2624	# echo $localhost_realname >> hostfile
	2625	# (( ii = ii + 1 ))
	2626	#done
	2627	#export MP_HOSTFILE=hostfile
	2628
	2629	if [[ "$LOADLBATCH" = yes ]]
	2630	then
	2631	totalview poe a.out $ROPTS
	2632	else
	2633	echo totalview poe -a a.out -procs $numprocs -rmpool 0 -nodes 1 $ROPTS
	2634	export TVDSVRLAUNCHCMD=ssh
	2635	totalview poe -a a.out -procs $numprocs -rmpool 0 -nodes 1 $ROPTS
	2636	fi
	2637	else
	2638	printf "\n +++ no debug available on \"$localhost\" "
	2639	printf "\n or not implemented in mrun so far"
	2640	locat=debug
	2641	exit
	2642	fi
	2643	else
	2644	if [[ -n $numprocs ]]
	2645	then
	2646
	2647	# RUNNING THE PROGRAM ON PARALLEL MACHINES
	2648	if [[ $(echo $host \| cut -c1-3) = ibm ]]
	2649	then
	2650	# SETUP THE IBM MPI ENVIRONMENT
	2651	export MP_SHARED_MEMORY=yes
	2652	export AIXTHREAD_SCOPE=S
	2653	export OMP_NUM_THREADS=$threads_per_task
	2654	export XLSMPOPTS="spins=0:yields=0:stack=20000000"
	2655	export AUTHSTATE=files
	2656	export XLFRTEOPTS="nlwidth=132:err_recovery=no" # RECORD-LENGTH OF NAMELIST-OUTPUT
	2657	# export MP_PRINTENV=yes
	2658
	2659	# TUNING-VARIABLEN ZUR VERBESSERUNG DER KOMMUNIKATION
	2660	# ZEIGEN ABER DERZEIT (SEP 04, FEDERATION) KAUM WIRKUNG
	2661	export MP_WAIT_MODE=poll
	2662	[[ $node_usage = not_shared ]] && export MP_SINGLE_THREAD=yes
	2663	# export MP_EAGER_LIMIT=65535
	2664
	2665	# # TESTWEISE FUER TURBOMPI (JAN 05)
	2666	# export MPJ_MTAB=128
	2667	# export MPJ_ALLTOALL=1
	2668	# export MPJ_ALLTOALLV=1
	2669
	2670	if [[ "$LOADLBATCH" = yes ]]
	2671	then
	2672	printf "\n--- Control: OMP_NUM_THREADS = \"$OMP_NUM_THREADS\" \n"
	2673	if [[ "$cond1" = hpmcount \|\| "$cond2" = hpmcount ]]
	2674	then
[102]	2675	/opt/optibm/HPM_2_4_1/bin/hpmcount a.out $ROPTS
[1]	2676	else
[102]	2677	poe ./a.out $ROPTS
[1]	2678	fi
	2679	else
	2680	if [[ $localhost = ibmb \|\| $localhost = ibmh \|\| $localhost = ibms ]]
	2681	then
[102]	2682	poe a.out -procs $numprocs -nodes 1 -rmpool 0 $ROPTS
[1]	2683	elif [[ $localhost = ibmy ]]
	2684	then
	2685	if [[ -f $hostfile ]]
	2686	then
	2687	cp $hostfile hostfile
	2688	else
	2689	(( ii = 1 ))
	2690	while (( ii <= $numprocs ))
	2691	do
	2692	echo $localhost_realname >> hostfile
	2693	(( ii = ii + 1 ))
	2694	done
	2695	fi
	2696	export MP_HOSTFILE=hostfile
[102]	2697	./a.out -procs $tasks_per_node $ROPTS
[1]	2698	else
	2699	if [[ "$host_file" = "" ]]
	2700	then
	2701	printf "\n +++ no hostfile given in configuration file"
	2702	locat=config_file
	2703	exit
	2704	else
	2705	eval host_file=$host_file
	2706	fi
	2707	export MP_HOSTFILE=$host_file
[102]	2708	poe a.out -procs $numprocs -tasks_per_node $numprocs $ROPTS
[1]	2709	fi
	2710	fi
	2711	elif [[ $host = nech \|\| $host = neck ]]
	2712	then
	2713	(( ii = nodes ))
	2714	if [[ $ii = 1 ]]
	2715	then
	2716	export F_ERRCNT=0 # acceptable number of errors before program is stopped
	2717	export MPIPROGINF=YES
[61]	2718	# export F_TRACE=YES\|FMT1\|FMT2 # output of ftrace informations to job protocol
[1]	2719	echo "*** execution on single node with mpirun"
[102]	2720	mpirun -np $numprocs ./a.out $ROPTS
[1]	2721	else
	2722	(( i = 0 ))
	2723	while (( i < ii ))
	2724	do
	2725	echo "-h $i -p $tasks_per_node -e ./mpi_exec_shell" >> multinode_config
	2726	(( i = i + 1 ))
	2727	done
	2728
	2729	echo "#!/bin/sh" > mpi_exec_shell
	2730	echo " " >> mpi_exec_shell
	2731	echo "set -u" >> mpi_exec_shell
	2732	echo "F_ERRCNT=0" >> mpi_exec_shell
	2733	echo "MPIPROGINV=YES" >> mpi_exec_shell
	2734	echo "OMP_NUM_THREADS=$threads_per_task" >> mpi_exec_shell
	2735	echo "cpurest=$cpurest" >> mpi_exec_shell
	2736	echo "fname=$fname" >> mpi_exec_shell
	2737	echo "localhost=$localhost" >> mpi_exec_shell
	2738	echo "return_addres=$return_addres" >> mpi_exec_shell
	2739	echo "return_username=$return_username" >> mpi_exec_shell
	2740	echo "tasks_per_node=$tasks_per_node" >> mpi_exec_shell
	2741	echo "write_binary=$write_binary" >> mpi_exec_shell
	2742	echo "use_seperate_pe_for_dvrp_output=$use_seperate_pe_for_dvrp_output" >> mpi_exec_shell
	2743	echo " " >> mpi_exec_shell
	2744	echo "export F_ERRCNT" >> mpi_exec_shell
	2745	echo "export MPIPROGINV" >> mpi_exec_shell
	2746	echo "export OMP_NUM_THREADS" >> mpi_exec_shell
	2747	echo "export cpurest" >> mpi_exec_shell
	2748	echo "export fname" >> mpi_exec_shell
	2749	echo "export localhost" >> mpi_exec_shell
	2750	echo "export return_addres" >> mpi_exec_shell
	2751	echo "export return_username" >> mpi_exec_shell
	2752	echo "export tasks_per_node" >> mpi_exec_shell
	2753	echo "export write_binary" >> mpi_exec_shell
	2754	echo "export use_seperate_pe_for_dvrp_output" >> mpi_exec_shell
	2755	echo " " >> mpi_exec_shell
[102]	2756	echo "exec ./a.out" >> mpi_exec_shell
[1]	2757
	2758	chmod u+x mpi_exec_shell
	2759	export MPIPROGINF=YES
	2760	mpirun -f multinode_config &
	2761	wait
	2762
	2763	fi
[82]	2764	elif [[ $(echo $host \| cut -c1-2) = lc && $host != lctit ]]
[1]	2765	then
	2766
	2767	# COPY HOSTFILE FROM SOURCE DIRECTORY OR CREATE IT, IF IT
	2768	# DOES NOT EXIST
[179]	2769	if [[ $host != lcsgih && $host != lcsgib ]]
[1]	2770	then
[179]	2771	if [[ -f $hostfile ]]
	2772	then
	2773	cp $hostfile hostfile
	2774	else
	2775	(( ii = 1 ))
	2776	while (( ii <= $numprocs / $threads_per_task ))
	2777	do
	2778	echo $localhost_realname >> hostfile
	2779	(( ii = ii + 1 ))
	2780	done
	2781	fi
	2782	eval zeile=\"`head -n $ii hostfile`\"
	2783	printf "\n *** running on: $zeile"
[1]	2784	fi
[179]	2785
[1]	2786	(( ii = $numprocs / $threads_per_task ))
	2787	export OMP_NUM_THREADS=$threads_per_task
[179]	2788	echo "OMP_NUM_THREADS=$OMP_NUM_THREADS"
[1]	2789	if [[ $threads_per_task != 1 ]]
	2790	then
	2791	printf "\n threads per task: $threads_per_task"
	2792	fi
[102]	2793	if [[ $run_coupled_model = false ]]
[1]	2794	then
[102]	2795	printf "\n\n"
[179]	2796	if [[ $host = lcsgih \|\| $host = lcsgib ]]
[164]	2797	then
[181]	2798	# mpirun -machinefile $PBS_NODEFILE -np $ii a.out $ROPTS
	2799	ulimit -s 30000
	2800	ulimit -a
	2801	mpirun_rsh -hostfile $PBS_NODEFILE -np $ii OMP_NUM_THREADS=$OMP_NUM_THREADS palm $ROPTS
	2802	# export MV2_NUM_PORTS=2
	2803	# export MV2_CPU_MAPPING=0:1:2:3
	2804	# mpiexec ./palm $ROPTS
[179]	2805	elif [[ $host = lcxt4 ]]
	2806	then
[164]	2807	aprun -n $ii -N $tasks_per_node a.out $ROPTS
	2808	else
[172]	2809	echo "no_coupling" > runfile_atmos
	2810	mpiexec -machinefile hostfile -n $ii a.out < runfile_atmos $ROPTS
[164]	2811	fi
[1]	2812	else
[102]	2813	(( iii = ii / 2 ))
[164]	2814	echo "atmosphere_to_ocean" > runfile_atmos
	2815	echo "ocean_to_atmosphere" > runfile_ocean
	2816
[102]	2817	printf "\n coupled run ($iii atmosphere, $iii ocean)"
	2818	printf "\n\n"
[164]	2819
	2820	if [[ $host == lcxt4 ]]
	2821	then
	2822	aprun -n $iii -N $tasks_per_node a.out < runfile_atmos $ROPTS &
	2823	aprun -n $iii -N $tasks_per_node a.out < runfile_ocean $ROPTS &
	2824	else
	2825
	2826	# WORKAROUND BECAUSE mpiexec WITH -env option IS NOT AVAILABLE ON SOME SYSTEMS
	2827	mpiexec -machinefile hostfile -n $iii a.out $ROPTS < runfile_atmos &
	2828	mpiexec -machinefile hostfile -n $iii a.out $ROPTS < runfile_ocean &
	2829	# mpiexec -machinefile hostfile -n $iii -env coupling_mode atmosphere_to_ocean a.out $ROPTS &
	2830	# mpiexec -machinefile hostfile -n $iii -env coupling_mode ocean_to_atmosphere a.out $ROPTS &
	2831	fi
[102]	2832	wait
[1]	2833	fi
[102]	2834
	2835	# if [[ $scirocco = true ]]
	2836	# then
	2837	# mpiexec -machinefile hostfile -n $ii a.out $ROPTS
	2838	# else
	2839	# mpirun -machinefile hostfile -np $ii a.out $ROPTS
	2840	# fi
	2841
[1]	2842	elif [[ $host = decalpha ]]
	2843	then
[102]	2844	dmpirun -np $numprocs a.out $ROPTS
[1]	2845	elif [[ $host = lctit ]]
	2846	then
	2847	export runfile=runfile.$kennung
	2848
	2849	echo "cd $PWD" > $runfile
	2850	echo "export OMP_NUM_THREADS=$OMP_NUM_THREADS" >> $runfile
	2851	echo "export cpurest=$cpurest" >> $runfile
	2852	echo "export fname=$fname" >> $runfile
	2853	echo "export localhost=$localhost" >> $runfile
	2854	echo "export return_addres=$return_addres" >> $runfile
	2855	echo "export return_username=$return_username" >> $runfile
	2856	echo "export tasks_per_node=$tasks_per_node" >> $runfile
	2857	echo "export write_binary=$write_binary" >> $runfile
	2858	echo "export use_seperate_pe_for_dvrp_output=$use_seperate_pe_for_dvrp_output" >> $runfile
	2859	echo "./a.out" >> $runfile
	2860	chmod u+x $runfile
	2861
	2862	if [[ "$QUEUE" = interactive ]]
	2863	then
[102]	2864	mpirun -np $numprocs a.out $ROPTS
[1]	2865	else
[127]	2866	(( mem_tsubame = $memory / 1024.0 ))
	2867	echo "Memory for Tsubame for each process in GB:", $mem_tsubame
[118]	2868	# n1ge -fore -g 1S060156 -mpi $numprocs -mem 4 -N palm -q $queue a.out $ROPTS
[126]	2869	/n1ge/TITECH_GRID/tools/bin/n1ge -fore -g $group_number -mpi ${numprocs}:$tasks_per_node -mem $mem_tsubame -N palm -rt $minuten -q $queue a.out $ROPTS
[1]	2870	fi
	2871
	2872	rm $runfile
	2873	else
[102]	2874	mpprun -n $numprocs a.out $ROPTS
[1]	2875	fi
	2876	[[ $? != 0 ]] && execution_error=true
	2877
	2878
	2879	# PERFORMANCE-AUSWERTUNG MIT APPRENTICE
	2880	if [[ "$cond1" = apprentice \|\| "$cond2" = apprentice ]]
	2881	then
	2882	apprentice
	2883	fi
	2884	else
[102]	2885	a.out $ROPTS
[1]	2886	fi
	2887	fi
	2888	if [[ $? != 0 \|\| $execution_error = true ]]
	2889	then
	2890
	2891	# ABBRUCH BEI LAUFZEITFEHLER
[102]	2892	# [[ ! ( "$cond1" = debug \|\| "$cond2" = debug ) ]] && cat aout_output*
[1]	2893	printf "\n +++ runtime error occured"
	2894	locat=execution
	2895	exit
	2896	else
[102]	2897	# [[ ! ( "$cond1" = debug \|\| "$cond2" = debug ) ]] && cat aout_output*
[1]	2898	printf "\n$striche\n *** execution finished \n"
	2899	fi
	2900
	2901
	2902
	2903	# EVENTUELLE OUTPUT-KOMMANDOS ABARBEITEN
	2904	(( i = 0 ))
	2905	while (( i < ioc ))
	2906	do
	2907	(( i = i + 1 ))
	2908	if (( i == 1 ))
	2909	then
	2910	printf "\n\n *** execution of OUTPUT-commands:\n$striche"
	2911	fi
	2912	printf "\n >>> ${out_command[$i]}"
	2913	eval ${out_command[$i]}
	2914	if (( i == ioc ))
	2915	then
	2916	printf "\n$striche\n"
	2917	fi
	2918	done
	2919
	2920
	2921	# EVTL. INHALT DES AKTUELLEN VERZEICHNISSES AUSGEBEN
	2922	if [[ $do_trace = true ]]
	2923	then
	2924	printf "\n\n"
	2925	ls -al
	2926	fi
	2927
	2928
	2929
	2930	# OUTPUT-DATEIEN AN IHRE ZIELORTE KOPIEREN
	2931	(( i = 0 ))
	2932	while (( i < iout ))
	2933	do
	2934	(( i = i + 1 ))
	2935	if (( i == 1 ))
	2936	then
	2937	printf "\n\n *** saving OUTPUT-files:\n$striche"
	2938	fi
	2939
	2940	# PRUEFEN, OB EINZELDATEI ODER DATEI PRO PROZESSOR
	2941	files_for_pes=false; filetyp=file
	2942	if [[ "${actionout[$i]}" = pe && -n $numprocs ]]
	2943	then
	2944	files_for_pes=true; filetyp=directory
	2945	actionout[$i]=""
	2946	elif [[ "${actionout[$i]}" = pe && ! -n $numprocs ]]
	2947	then
	2948	actionout[$i]=""
	2949	elif [[ "${actionout[$i]}" = arpe && -n $numprocs ]]
	2950	then
	2951	files_for_pes=true; filetyp=directory
	2952	actionout[$i]="ar"
	2953	elif [[ "${actionout[$i]}" = arpe && ! -n $numprocs ]]
	2954	then
	2955	actionout[$i]="ar"
	2956	elif [[ "${actionout[$i]}" = flpe && -n $numprocs ]]
	2957	then
	2958	files_for_pes=true; filetyp=directory
	2959	actionout[$i]="fl"
	2960	elif [[ "${actionout[$i]}" = flpe && ! -n $numprocs ]]
	2961	then
	2962	actionout[$i]="fl"
	2963	elif [[ "${actionout[$i]}" = trpe && -n $numprocs ]]
	2964	then
	2965	files_for_pes=true; filetyp=directory
	2966	actionout[$i]="tr"
	2967	elif [[ "${actionout[$i]}" = trpe && ! -n $numprocs ]]
	2968	then
	2969	actionout[$i]="tr"
	2970	fi
	2971
	2972	if [[ ! -f ${localout[$i]} && $files_for_pes = false ]]
	2973	then
	2974	printf "\n +++ temporary OUTPUT-file ${localout[$i]} does not exist\n"
	2975	elif [[ ! -f ${localout[$i]}/_0000 && $files_for_pes = true ]]
	2976	then
	2977	printf "\n +++ temporary OUTPUT-file ${localout[$i]}/.... does not exist\n"
	2978	else
	2979
	2980
	2981	# KOPIEREN PER FTP/SCP (IMMER IM BINAERMODUS, -M: FALLS ZIELKATALOG
	2982	# NICHT VORHANDEN, WIRD VERSUCHT, IHN ANZULEGEN), ABER NUR BEI
	2983	# REMOTE-RECHNUNGEN
	2984	if [[ "${actionout[$i]}" = tr ]]
	2985	then
	2986	if [[ $localhost != $fromhost ]]
	2987	then
	2988	if [[ $files_for_pes = false ]]
	2989	then
	2990	cps=""
	2991	cst=""
	2992	else
	2993	cps=-c
	2994	cst="/"
	2995	fi
	2996	if [[ $localhost = ibmh \|\| $localhost = ibmb \|\| $localhost = nech ]]
	2997	then
	2998
	2999	# TRANSFER IN EIGENSTAENDIGEM JOB
	3000	# ZUERST KOPIE DER DATEI INS TEMPORAERE DATENVERZEICHNIS
	3001	[[ ! -d $tmp_data_catalog/TRANSFER ]] && mkdir -p $tmp_data_catalog/TRANSFER
	3002	file_to_transfer=${fname}_${localout[$i]}_to_transfer_$kennung
	3003	if [[ $files_for_pes = false ]]
	3004	then
	3005	ln -f ${localout[$i]} $tmp_data_catalog/TRANSFER/$file_to_transfer
	3006	else
	3007	mkdir $tmp_data_catalog/TRANSFER/$file_to_transfer
	3008	ln ${localout[$i]}/* $tmp_data_catalog/TRANSFER/$file_to_transfer
	3009	fi
	3010
	3011	echo "set -x" > transfer_${localout[$i]}
	3012	echo "cd $tmp_data_catalog/TRANSFER" >> transfer_${localout[$i]}
[82]	3013
	3014	printf "\n >>> OUTPUT: ${localout[$i]}$cst by SCP in seperate job to"
	3015	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}$cst"
	3016	printf "\n or higher cycle\n"
	3017	echo "batch_scp $cps -b -m -u $return_username $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
	3018
[1]	3019	echo "[[ \$? = 0 ]] && rm $file_to_transfer" >> transfer_${localout[$i]}
	3020
	3021	if [[ $localhost = nech ]]
	3022	then
[82]	3023	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 900 transfer_${localout[$i]}
[1]	3024	else
	3025	if [[ "$LOGNAME" = b323013 ]]
	3026	then
[164]	3027	subjob -v -q c1 -X 0 -m 1000 -t 900 -c $job_catalog transfer_${localout[$i]}
[1]	3028	else
[164]	3029	subjob -d -v -q c1 -X 0 -m 1000 -t 900 -c $job_catalog transfer_${localout[$i]}
[1]	3030	fi
	3031	fi
	3032
	3033	else
	3034
	3035	# TRANSFER INNERHALB DIESES JOBS
	3036	transfer_failed=false
[82]	3037	printf "\n >>> OUTPUT: ${localout[$i]}$cst by SCP to"
	3038	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}$cst\n"
	3039	batch_scp $cps -b -m -u $return_username $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
	3040	[[ $? != 0 ]] && transfer_failed=true
[1]	3041
	3042	# BEI FEHLGESCHLAGENEM TRANSFER SICHERUNGSKOPIE AUF
	3043	# LOKALER MASCHINE ANLEGEN
	3044	if [[ $transfer_failed = true ]]
	3045	then
	3046	printf " +++ transfer failed. Trying to save a copy on the local host under:\n"
	3047	printf " ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung\n"
	3048
	3049	# ERSTMAL PRUEFEN, OB VERZEICHNIS EXISTIERT. GEGEBENENFALLS
	3050	# ANLEGEN.
	3051	eval local_catalog=${pathout[$i]}
	3052	if [[ ! -d $local_catalog ]]
	3053	then
	3054	printf " *** local directory does not exist. Trying to create:\n"
	3055	printf " $local_catalog \n"
	3056	mkdir -p $local_catalog
	3057	fi
	3058	eval cp ${localout[$i]} ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung
	3059	transfer_problems=true
	3060	fi
	3061	fi
	3062	else
	3063
	3064	# WERTZUWEISUNG, SO DASS WEITER UNTEN NUR KOPIERT WIRD
	3065	actionout[$i]=""
	3066	fi
	3067	fi
	3068
	3069
	3070	# APPEND PER FTP/SCP (IMMER IM BINAERMODUS, -M: FALLS ZIELKATALOG
	3071	# NICHT VORHANDEN, WIRD VERSUCHT, IHN ANZULEGEN), ABER NUR BEI
	3072	# REMOTE-RECHNUNGEN
	3073	if [[ "${actionout[$i]}" = tra ]]
	3074	then
	3075	if [[ $localhost != $fromhost ]]
	3076	then
	3077	if [[ $localhost = ibmh \|\| $localhost = ibmb \|\| $localhost = nech ]]
	3078	then
	3079
	3080	# TRANSFER IN EIGENSTAENDIGEM JOB
	3081	# ZUERST KOPIE DER DATEI INS TEMPORAERE DATENVERZEICHNIS
	3082	[[ ! -d $tmp_data_catalog/TRANSFER ]] && mkdir -p $tmp_data_catalog/TRANSFER
	3083	file_to_transfer=${fname}_${localout[$i]}_to_transfer_$kennung
	3084	ln -f ${localout[$i]} $tmp_data_catalog/TRANSFER/$file_to_transfer
	3085
	3086	echo "set -x" > transfer_${localout[$i]}
	3087	echo "cd $tmp_data_catalog/TRANSFER" >> transfer_${localout[$i]}
[82]	3088
	3089	printf "\n >>> OUTPUT: ${localout[$i]} append by SCP in seperate job to"
	3090	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}"
	3091	printf "\n or higher cycle\n"
	3092	echo "batch_scp -A -b -m -u $return_username $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
	3093
[1]	3094	echo "[[ \$? = 0 ]] && rm $file_to_transfer" >> transfer_${localout[$i]}
	3095
	3096	if [[ $localhost = nech ]]
	3097	then
[82]	3098	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 900 transfer_${localout[$i]}
[1]	3099	else
	3100	if [[ $LOGNAME = b323013 ]]
	3101	then
[164]	3102	subjob -v -q c1 -X 0 -m 1000 -t 900 -c $job_catalog transfer_${localout[$i]}
[1]	3103	else
[164]	3104	subjob -d -v -q c1 -X 0 -m 1000 -t 900 -c $job_catalog transfer_${localout[$i]}
[1]	3105	fi
	3106	fi
	3107
	3108	else
	3109
	3110	# TRANSFER INNERHALB DIESES JOBS
	3111	transfer_failed=false
[82]	3112	printf "\n >>> OUTPUT: ${localout[$i]} append by SCP to"
	3113	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}\n"
	3114	batch_scp -A -b -m -u $return_username $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
	3115	[[ $? != 0 ]] && transfer_failed=true
[1]	3116
	3117	# BEI FEHLGESCHLAGENEM TRANSFER SICHERUNGSKOPIE AUF
	3118	# LOKALER MASCHINE ANLEGEN
	3119	if [[ $transfer_failed = true ]]
	3120	then
	3121	printf " +++ transfer failed. Trying to save a copy on the local host under:\n"
	3122	printf " ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung\n"
	3123
	3124	# ERSTMAL PRUEFEN, OB VERZEICHNIS EXISTIERT. GEGEBENENFALLS
	3125	# ANLEGEN
	3126	eval local_catalog=${pathout[$i]}
	3127	if [[ ! -d $local_catalog ]]
	3128	then
	3129	printf " *** local directory does not exist. Trying to create:\n"
	3130	printf " $local_catalog \n"
	3131	mkdir -p $local_catalog
	3132	fi
	3133
	3134	eval cp ${localout[$i]} ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung
	3135	transfer_problems=true
	3136	fi
	3137	fi
	3138	else
	3139
	3140	# WERTZUWEISUNG, SO DASS WEITER UNTEN NUR APPEND AUF
	3141	# LOKALER MASCHINE DURCHGEFUEHRT WIRD
	3142	actionout[$i]=a
	3143	fi
	3144	fi
	3145
	3146
	3147	# OUTPUT-DATEI FUER EINEN FORTSETZUNGSLAUF. DATEI WIRD PER
	3148	# LINK AUF DEN TEMPORAEREN DATENKATALOG GELEGT. OPTION -f WIRD
	3149	# VERWENDET, FALLS DORT NOCH EINE DATEI GLEICHEN NAMENS VORHANDEN
	3150	# SEIN SOLLTE. ANSCHLIESSEND WIRD SEINE ARCHIVIERUNG ANGESTOSSEN
	3151	if [[ "${actionout[$i]}" = fl ]]
	3152	then
	3153	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
	3154	chmod g+rx $tmp_data_catalog
	3155	if [[ $files_for_pes = false ]]
	3156	then
	3157	printf "\n >>> OUTPUT: ${localout[$i]} to"
	3158	printf "\n $tmp_data_catalog/${frelout[$i]} (temporary data catalog)\n"
	3159	ln -f ${localout[$i]} $tmp_data_catalog/${frelout[$i]}
	3160	else
	3161	printf "\n >>> OUTPUT: ${localout[$i]}/.... to"
	3162	printf "\n $tmp_data_catalog/${frelout[$i]} (temporary data catalog)\n"
	3163	mkdir $tmp_data_catalog/${frelout[$i]}
[149]	3164	cd ${localout[$i]}
	3165	for file in $(ls *)
	3166	do
	3167	ln -f $file $tmp_data_catalog/${frelout[$i]}
	3168	done
	3169	cd $TEMPDIR
[1]	3170	fi
	3171
	3172
	3173	# ARCHIVIERUNGSJOB WIRD ERZEUGT UND ABGESCHICKT
	3174	if [[ $store_on_archive_system = true ]]
	3175	then
	3176
	3177	if [[ $archive_system = asterix ]]
	3178	then
	3179	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
	3180	if [[ $files_for_pes = false ]]
	3181	then
	3182	echo "stageout ${frelout[$i]} > STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
	3183	else
	3184	echo "stageout -t ${frelout[$i]} > STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
	3185	fi
	3186	echo "cat STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
	3187	echo "if [[ \$(grep -c \"st.msg:150\" STAGE_OUTPUT${i}_$kennung) != 0 ]]" >> archive_${frelout[$i]}
	3188	echo "then" >> archive_${frelout[$i]}
	3189	echo " do_stageout=false" >> archive_${frelout[$i]}
	3190	echo "else" >> archive_${frelout[$i]}
	3191	echo " echo \" +++ $filetyp ${frelout[$i]} could not be stored on archive-system\" " >> archive_${frelout[$i]}
	3192	echo " cat /dev/null > ~/job_queue/ARCHIVE_ERROR_$fname" >> archive_${frelout[$i]}
	3193	echo " cat STAGE_OUTPUT${i}_$kennung > ~/job_queue/archive_${frelout[$i]}_error" >> archive_${frelout[$i]}
	3194	echo " echo \" *** $filetyp ${frelout[$i]} will be copied to \$WORK as backup\" " >> archive_${frelout[$i]}
	3195	if [[ $files_for_pes = false ]]
	3196	then
	3197	echo " cp ${frelout[$i]} \$WORK" >> archive_${frelout[$i]}
	3198	else
	3199	echo " cp -r ${frelout[$i]} \$WORK/${frelout[$i]}" >> archive_${frelout[$i]}
	3200	fi
	3201	echo " echo \" *** $filetyp ${frelout[$i]} saved\" " >> archive_${frelout[$i]}
	3202	echo "fi" >> archive_${frelout[$i]}
	3203	echo "rm STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
	3204	elif [[ $archive_system = DMF ]]
	3205	then
	3206	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
	3207	if [[ $files_for_pes = false ]]
	3208	then
	3209	printf "\n +++ archiving of single files impossible with $archive_system !\n"
	3210	locat=DMF
	3211	exit
	3212	else
	3213	# FUER RECHNER IN JUELICH. DORT KOENNTEN AUCH
	3214	# EINZELNE DATEIEN GESICHERT WERDEN (SPAETER KORR.)
	3215	echo "rm -rf \$ARCHIVE/${frelout[$i]}" >> archive_${frelout[$i]}
	3216	echo "cp -r ${frelout[$i]} \$ARCHIVE" >> archive_${frelout[$i]}
	3217	fi
	3218	elif [[ $archive_system = tivoli ]]
	3219	then
	3220	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
	3221	if [[ $files_for_pes = false ]]
	3222	then
	3223	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
	3224	echo "set -x" >> archive_${frelout[$i]}
	3225	echo "rm -rf \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
	3226	echo "cp ${frelout[$i]} \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
	3227	else
	3228
	3229	echo "set -x" >> archive_${frelout[$i]}
	3230	echo "rm -rf \$PERM/${frelout[$i]}/*" >> archive_${frelout[$i]}
	3231	echo "[[ ! -d \$PERM/${frelout[$i]} ]] && mkdir $PERM/${frelout[$i]}" >> archive_${frelout[$i]}
	3232	cd $tmp_data_catalog
	3233	all_files=`ls -1 ${frelout[$i]}/*`
	3234	cd - > /dev/null
	3235	(( inode = 0 ))
	3236	(( tp1 = tasks_per_node + 1 ))
	3237	while (( inode < nodes ))
	3238	do
	3239	# echo "*** all_files = \"$all_files\" "
	3240	files=`echo $all_files \| cut -d" " -f1-$tasks_per_node`
	3241	all_files=`echo $all_files \| cut -d" " -f$tp1-`
	3242	# echo "*** tasks_per_node = \"$tasks_per_node\" "
	3243	# echo "*** files = \"$files\" "
	3244	# echo "*** all_files = \"$all_files\" "
	3245	echo "tar cvf \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar $files" >> archive_${frelout[$i]}
	3246	echo "dsmc incremental \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar" >> archive_${frelout[$i]}
	3247	echo "dsmmigrate \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar" >> archive_${frelout[$i]}
	3248	(( inode = inode + 1 ))
	3249	done
	3250	# echo "rm -rf \$PERM/${frelout[$i]}.tar" >> archive_${frelout[$i]}
	3251	# echo "tar cvf \$PERM/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
	3252	fi
	3253	elif [[ $archive_system = ut ]]
	3254	then
	3255	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
	3256	if [[ $files_for_pes = false ]]
	3257	then
	3258	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
	3259	echo "set -x" >> archive_${frelout[$i]}
	3260	echo "rm -rf \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
	3261	echo "cp ${frelout[$i]} \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
	3262	else
	3263
	3264	echo "set -x" >> archive_${frelout[$i]}
	3265	echo "rm -rf \$UT/${frelout[$i]}/*" >> archive_${frelout[$i]}
	3266	echo "[[ ! -d \$UT/${frelout[$i]} ]] && mkdir $UT/${frelout[$i]}" >> archive_${frelout[$i]}
	3267	cd $tmp_data_catalog
	3268	all_files=`ls -1 ${frelout[$i]}/*`
	3269	cd - > /dev/null
	3270	(( inode = 0 ))
	3271	(( tp1 = tasks_per_node + 1 ))
	3272	while (( inode < nodes ))
	3273	do
	3274	files=`echo $all_files \| cut -d" " -f1-$tasks_per_node`
	3275	all_files=`echo $all_files \| cut -d" " -f$tp1-`
	3276	echo "tar cvf \$UT/${frelout[$i]}/${frelout[$i]}.node_$inode.tar $files" >> archive_${frelout[$i]}
	3277	(( inode = inode + 1 ))
	3278	done
	3279	fi
	3280	elif [[ $archive_system = none ]]
	3281	then
	3282	printf " +++ archiving on $localhost not available!\n"
	3283	fi
	3284
	3285	if [[ $archive_system != none ]]
	3286	then
	3287	if [[ $localhost = ibmh \|\| $localhost = ibmb ]]
	3288	then
[164]	3289	# subjob -d -v -q cdata -X 0 -m 1000 -t 43200 -c $job_catalog archive_${frelout[$i]}
	3290	subjob -v -q cdata -X 0 -m 1000 -t 43200 -c $job_catalog archive_${frelout[$i]}
[1]	3291	elif [[ $localhost = nech ]]
	3292	then
[82]	3293	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 7200 archive_${frelout[$i]}
[1]	3294	fi
	3295	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
	3296	fi
	3297	else
	3298	printf " +++ caution: option -A is switched on. No archiving on $archive_system!\n"
	3299	fi
	3300
	3301
	3302	# LEERDATEI IM BENUTZERVERZEICHNIS ANLEGEN, DAMIT BEKANNT IST,
	3303	# WIE DIE HOECHSTE ZYKLUSNUMMER AUF DEM ARCHIV-SYSTEM LAUTET
	3304	if [[ $files_for_pes = false ]]
	3305	then
	3306	cat /dev/null > ${pathout[$i]}
	3307	else
	3308	mkdir -p ${pathout[$i]}
	3309	fi
	3310
	3311	fi
	3312
	3313
	3314	# KOPIEREN AUF LOKALER MASCHINE ZUM ARCHIV-SYSTEM
	3315	# AUSSERDEM MUSS LEERDATEI ANGELEGT WERDEN, DAMIT BEKANNT IST,
	3316	# WIE DIE HOECHSTE ZYKLUSNUMMER AUF DEM ARCHIV-SYSTEM LAUTET
	3317	# FALLS IRGENDEINE (VON MEHREREN) ARCHIVIERUNGEN SCHIEF GEHT,
	3318	# WIRD FLAG GESETZT UND BLEIBT AUCH BEI WEITEREN ORDNUNGS-
	3319	# GEMAESSEN ARCHIVIERUNGEN GESETZT
	3320	if [[ "${actionout[$i]}" = ar ]]
	3321	then
	3322	if [[ $files_for_pes = false ]]
	3323	then
	3324	printf "\n >>> OUTPUT: ${localout[$i]} to"
	3325	printf "\n ${pathout[$i]}"
	3326	printf "\n File will be copied to archive-system ($archive_system) !\n"
	3327	else
	3328	printf "\n >>> OUTPUT: ${localout[$i]}/_.... to"
	3329	printf "\n ${pathout[$i]}"
	3330	printf "\n Directory will be copied to archive-system ($archive_system) !\n"
	3331	fi
	3332	mv ${localout[$i]} ${frelout[$i]}
	3333
	3334	file_saved=false
	3335
	3336	if [[ $archive_system = asterix ]]
	3337	then
	3338	do_stageout=true
	3339	(( stageout_anz = 0 ))
	3340	while [[ $do_stageout = true ]]
	3341	do
	3342	if [[ $files_for_pes = false ]]
	3343	then
	3344	stageout ${frelout[$i]} > STAGE_OUTPUT
	3345	else
	3346	stageout -t ${frelout[$i]} > STAGE_OUTPUT
	3347	fi
	3348	cat STAGE_OUTPUT
	3349	if [[ $(grep -c "st.msg:150" STAGE_OUTPUT) != 0 ]]
	3350	then
	3351	file_saved=true
	3352	do_stageout=false
	3353	else
	3354	if [[ $files_for_pes = false ]]
	3355	then
	3356	printf "\n +++ file ${frelout[$i]} could not be saved on archive-system"
	3357	else
	3358	printf "\n +++ directory ${frelout[$i]} could not be saved on archive-system"
	3359	fi
	3360	(( stageout_anz = stageout_anz + 1 ))
	3361	if (( stageout_anz == 10 ))
	3362	then
	3363	printf "\n +++ stoped after 10 unsuccessful tries!"
	3364	archive_save=false
	3365	do_stageout=false
	3366	else
	3367	printf "\n *** new try to store on archive after 15 min:"
	3368	sleep 900
	3369	fi
	3370	fi
	3371	done
	3372	elif [[ $archive_system = DMF ]]
	3373	then
	3374	if [[ $files_for_pes = false ]]
	3375	then
	3376	printf "\n +++ archiving of single files impossible on $archive_system!\n"
	3377	locat=DMF
	3378	exit
	3379	else
	3380	rm -rf $ARCHIVE/${frelout[$i]}
	3381	cp -r ${frelout[$i]} $ARCHIVE
	3382	fi
	3383	file_saved=true
	3384	elif [[ $archive_system = tivoli ]]
	3385	then
	3386	# ARCHIVIERUNG NUR PER BATCH-JOB MOEGLICH
	3387	# DATEI MUSS ZWISCHENZEITLICH INS TEMPORAERE DATENVERZEICHNIS
	3388	# GELEGT WERDEN
	3389	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
	3390	chmod g+rx $tmp_data_catalog
	3391	if [[ $files_for_pes = false ]]
	3392	then
	3393	ln -f ${frelout[$i]} $tmp_data_catalog/${frelout[$i]}
	3394	else
	3395	mkdir $tmp_data_catalog/${frelout[$i]}
	3396	ln -f ${frelout[$i]}/* $tmp_data_catalog/${frelout[$i]}
	3397	fi
	3398
	3399	# BATCH JOB GENERIEREN UND ABSCHICKEN; DATEI MUSS WIEDER
	3400	# AUS TEMPORAEREM DATENVERZEICHNIS ENTFERNT WERDEN
	3401	echo "cd $tmp_data_catalog" > archive_${frelout[$i]}
	3402	if [[ $files_for_pes = false ]]
	3403	then
	3404	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
	3405	echo "rm -rf \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
	3406	echo "cp ${frelout[$i]} \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
	3407	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
	3408	else
	3409	echo "rm -rf \$PERM/${frelout[$i]}.tar" >> archive_${frelout[$i]}
	3410	echo "tar cvf \$PERM/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
	3411	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
	3412	fi
	3413
[164]	3414	subjob -v -d -q cdata -X 0 -m 1000 -t 43200 -c $job_catalog archive_${frelout[$i]}
[1]	3415	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
	3416	file_saved=true
	3417
	3418	elif [[ $archive_system = ut ]]
	3419	then
	3420	# ARCHIVIERUNG NUR PER BATCH-JOB MOEGLICH
	3421	# DATEI MUSS ZWISCHENZEITLICH INS TEMPORAERE DATENVERZEICHNIS
	3422	# GELEGT WERDEN
	3423	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
	3424	chmod g+rx $tmp_data_catalog
	3425	if [[ $files_for_pes = false ]]
	3426	then
	3427	ln -f ${frelout[$i]} $tmp_data_catalog/${frelout[$i]}
	3428	else
	3429	mkdir $tmp_data_catalog/${frelout[$i]}
	3430	ln -f ${frelout[$i]}/* $tmp_data_catalog/${frelout[$i]}
	3431	fi
	3432
	3433	# BATCH JOB GENERIEREN UND ABSCHICKEN; DATEI MUSS WIEDER
	3434	# AUS TEMPORAEREM DATENVERZEICHNIS ENTFERNT WERDEN
	3435	echo "cd $tmp_data_catalog" > archive_${frelout[$i]}
	3436	if [[ $files_for_pes = false ]]
	3437	then
	3438	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
	3439	echo "rm -rf \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
	3440	echo "cp ${frelout[$i]} \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
	3441	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
	3442	else
	3443	echo "rm -rf \$UT/${frelout[$i]}.tar" >> archive_${frelout[$i]}
	3444	echo "tar cvf \$UT/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
	3445	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
	3446	fi
	3447
[82]	3448	subjob -v -c /pf/b/$usern/job_queue -d -q pp -X 0 -m 1000 -t 7200 archive_${frelout[$i]}
[1]	3449	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
	3450	file_saved=true
	3451
	3452	else
	3453	printf "\n +++ archive_system=\"$archive_system\" archiving impossible!"
	3454	archive_save=false
	3455	fi
	3456	if [[ $file_saved = true ]]
	3457	then
	3458	if [[ $files_for_pes = false ]]
	3459	then
	3460	cat /dev/null > ${pathout[$i]}
	3461	else
	3462	mkdir -p ${pathout[$i]}
	3463	fi
	3464	fi
	3465	fi
	3466
	3467	# APPEND AUF LOKALER MASCHINE
	3468	if [[ "${actionout[$i]}" = "a" ]]
	3469	then
	3470	printf "\n >>> OUTPUT: ${localout[$i]} append to ${pathout[$i]}\n"
	3471	cat ${localout[$i]} >> ${pathout[$i]}
	3472	fi
	3473
	3474	# KOPIEREN AUF LOKALER MASCHINE
	3475	# ES MUSS KOPIERT WERDEN, DA MOVE NICHT UEBER FILESYSTEM HINAUS MOEGLICH
	3476	if [[ "${actionout[$i]}" = "" && $files_for_pes = false ]]
	3477	then
	3478
	3479	# KOPIEREN AUF EINPROZESSORMASCHINE
[5]	3480	if [[ "${extout[$i]}" != " " && "${extout[$i]}" != "" ]]
[1]	3481	then
	3482	printf "\n >>> OUTPUT: ${localout[$i]} to ${pathout[$i]}.${extout[$i]}\n"
[149]	3483	if [[ $link_local_output = true ]]
	3484	then
	3485	printf " using ln -f\n"
	3486	ln -f ${localout[$i]} ${pathout[$i]}.${extout[$i]}
	3487	fi
	3488	# If "ln -f" fails of if "$link_local_output = false" do a normal "cp"
	3489	if [[ ! -f "${pathout[$i]}.${extout[$i]}" ]]
	3490	then
	3491	if [[ $link_local_output = true ]]
	3492	then
	3493	printf " ln failed, using cp...\n"
	3494	fi
	3495	cp ${localout[$i]} ${pathout[$i]}.${extout[$i]}
	3496	fi
[1]	3497	else
	3498	printf "\n >>> OUTPUT: ${localout[$i]} to ${pathout[$i]}\n"
[149]	3499	if [[ $link_local_output = true ]]
	3500	then
	3501	printf " using ln -f\n"
	3502	ln -f ${localout[$i]} ${pathout[$i]}
	3503	fi
	3504	# If "ln -f" fails of if "$link_local_output = false" do a normal "cp"
	3505	if [[ ! -f "${pathout[$i]}" ]]
	3506	then
	3507	if [[ $link_local_output = true ]]
	3508	then
	3509	printf " ln failed, using cp...\n"
	3510	fi
	3511	cp ${localout[$i]} ${pathout[$i]}
	3512	fi
[1]	3513	fi
	3514
	3515	elif [[ "${actionout[$i]}" = "" && $files_for_pes = true ]]
	3516	then
	3517
	3518	# DIE DEN PROZESSOREN EINES PARALLELRECHNERS ZUGEHOERIGEN
	3519	# DATEIEN WERDEN ERST IN EINEM KATALOG GESAMMELT UND DIESER
	3520	# WIRD DANN KOPIERT
	3521	# PER MOVE UMBENANNT WERDEN
	3522	printf "\n >>> OUTPUT: ${localout[$i]}/_.... to ${pathout[$i]}\n"
[149]	3523	if [[ $link_local_output = true ]]
	3524	then
	3525	printf " using ln -f\n"
	3526	mkdir ${pathout[$i]}
	3527	cd ${localout[$i]}
	3528	for file in $(ls *)
	3529	do
	3530	ln -f $file ${pathout[$i]}
	3531	done
	3532	cd $TEMPDIR
	3533	fi
	3534	# If "ln -f" fails of if "$link_local_output = false" do a normal "cp -r"
	3535	if [[ ! -f "${pathout[$i]}/_0000" ]]
	3536	then
	3537	if [[ $link_local_output = true ]]
	3538	then
	3539	printf " ln failed for .../_0000, using cp...\n"
	3540	fi
	3541	cp -r ${localout[$i]} ${pathout[$i]}
	3542	fi
[1]	3543
	3544	fi
	3545	fi
	3546	done
	3547	if (( i != 0 ))
	3548	then
	3549	if [[ $transfer_problems = true ]]
	3550	then
	3551	printf "\n$striche\n *** OUTPUT-files saved"
	3552	printf "\n +++ WARNING: some data transfers failed! \n"
	3553	else
	3554	printf "\n$striche\n *** all OUTPUT-files saved \n"
	3555	fi
	3556	fi
	3557
	3558
	3559	# EVENTUELL FOLGEJOB STARTEN
	3560	# DATEI CONTINUE_RUN MUSS VOM BENUTZERPROGRAMM AUS ERZEUGT WERDEN
	3561	if [[ -f CONTINUE_RUN ]]
	3562	then
	3563
	3564	if [[ $archive_save = true ]]
	3565	then
	3566
	3567	# ZUERST IN MRUN-AUFRUF OPTIONEN FUER FORTSETZUNGSLAUF, FUER
	3568	# STILLES ABARBEITEN (OHNE INTERAKTIVE RUECKFAGEN) UND FUER
	3569	# BATCH-BETRIEB (NUR WICHTIG, FALLS BATCH AUF LOKALER MASCHINE
	3570	# DURCHGEFUEHRT WERDEN SOLL) EINFUEGEN, FALLS NICHT BEREITS VOR-
	3571	# HANDEN
	3572	[[ $(echo $mc \| grep -c "\-C") = 0 ]] && mc="$mc -C"
	3573	[[ $(echo $mc \| grep -c "\-v") = 0 ]] && mc="$mc -v"
	3574	[[ $(echo $mc \| grep -c "\-b") = 0 ]] && mc="$mc -b"
	3575	if [[ $(echo $mc \| grep -c "#") != 0 ]]
	3576	then
	3577	mc=`echo $mc \| sed 's/#/f/g'`
	3578	fi
	3579
	3580
	3581	# JOB STARTEN
	3582	printf "\n\n *** initiating restart-run on \"$return_addres\" using command:\n"
	3583	echo " $mc"
	3584	printf "\n$striche\n"
	3585	if [[ $localhost != $fromhost ]]
	3586	then
	3587
	3588	if [[ $localhost = nech \|\| $localhost = ibmb \|\| $localhost = ibmh \|\| $localhost = ibms \|\| $localhost = lctit ]]
	3589	then
	3590	echo "*** ssh will be used to initiate restart-runs!"
	3591	echo " return_addres=\"$return_addres\" "
	3592	echo " return_username=\"$return_username\" "
	3593	if [[ $return_addres = 172.20.25.41 ]]
	3594	then
	3595	# WORKAROUND AUF SCIROCCO AM TIT
[33]	3596	print "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc " \| ssh $return_addres -l $return_username
[1]	3597	else
[33]	3598	ssh $return_addres -l $return_username "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc "
[1]	3599	fi
	3600	else
	3601	printf "\n +++ no restart mechanism available for host \"$localhost\" "
	3602	locat=restart; exit
	3603	fi
	3604
	3605	# WARTEN, DAMIT SICH RESTART JOB IN QUEUE EINREIHEN KANN, BEVOR
	3606	# DER AKTUELLE JOB ENDET
	3607	sleep 30
	3608
	3609	else
	3610
	3611	# BEI RECHNUNGEN AUF LOKALER MASCHINE KANN MRUN DIREKT AUFGE-
[108]	3612	# RUFEN WERDEN, AUSSER AUF lcfimm
[1]	3613	cd $LOCAL_PWD
[108]	3614	if [[ $localhost = lcfimm ]]
	3615	then
	3616	ssh $return_addres -l $return_username "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc "
	3617	else
	3618	eval $mc # ' MUESSEN AUSGEWERTET WERDEN
	3619	fi
[1]	3620	cd - > /dev/null
	3621	fi
	3622	printf "\n$striche\n *** restart-run initiated \n"
	3623
	3624
	3625	# EVENTUELL INPUT-DATEIEN, DIE VON TEMPORAEREM DATENVERZEICHNIS
	3626	# GEHOLT WORDEN SIND, LOESCHEN
	3627	(( i = 0 ))
	3628	while (( i < iin ))
	3629	do
	3630	(( i = i + 1 ))
	3631	if [[ "${got_tmp[$i]}" = true && $keep_data_from_previous_run = false ]]
	3632	then
	3633	rm -r $tmp_data_catalog/${frelin[$i]}
	3634	fi
	3635	done
	3636
	3637	else
	3638
	3639	printf "\n +++ no restart-run possible, since errors occured"
	3640	printf "\n during the archive process"
	3641	fi
	3642
	3643	fi
	3644
	3645
	3646
	3647	# EVTL. EMAIL-BENACHRICHTIGUNG UEBER ABGESCHLOSSENEN LAUF
	3648	if [[ "$email_notification" != "" ]]
	3649	then
	3650
	3651	if [[ $localhost != $fromhost ]]
	3652	then
	3653	if [[ -f CONTINUE_RUN ]]
	3654	then
	3655	echo "PALM restart run necessary" > email_text
	3656	echo "description header of actual run:" >> email_text
	3657	cat CONTINUE_RUN >> email_text
	3658	echo "mrun-command to restart:" >> email_text
	3659	echo "$mc" >> email_text
	3660	else
	3661	echo "PALM run with base filename \"$fname\" on host \"$localhost\" finished" > email_text
	3662	fi
	3663	mail $email_notification < email_text
	3664	printf "\n *** email notification sent to \"$email_notification\" "
	3665	fi
	3666	fi
	3667
	3668
	3669
	3670	# ALLE ARBEITEN BEENDET. TEMPORAERER KATALOG KANN GELOESCHT WERDEN
	3671	cd $HOME
	3672	[[ $delete_temporary_catalog = true ]] && rm -rf $TEMPDIR
	3673
	3674	else
	3675
	3676
	3677	# FALLS AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL, WERDEN JETZT ENTSPRE-
	3678	# CHENDE AKTIONEN DURCHGEFUEHRT
	3679
	3680	# MRUN-BEFEHL FUER REMOTE-MASCHINE ZUSAMMENSTELLEN
[82]	3681	mrun_com="$mrun_script_name -a $afname -c $config_file -d $fname -h $host -H $fromhost -m $memory -t $cpumax -q $queue -R $return_addres -U $return_username -u $remote_username"
[1]	3682	[[ "$cpp_opts" != "" ]] && mrun_com=${mrun_com}" -D \"$cpp_opts\""
[79]	3683	[[ "$global_revision" != "" ]] && mrun_com=${mrun_com}" -G \"$global_revision\""
[123]	3684	[[ $group_number != none ]] && mrun_com=${mrun_com}" -g $group_number"
[1]	3685	[[ $do_compile = true ]] && mrun_com=${mrun_com}" -s \"$source_list\""
	3686	[[ "$input_list" != "" ]] && mrun_com=${mrun_com}" -i \"$input_list\""
	3687	[[ $ignore_archive_error = true ]] && mrun_com=${mrun_com}" -I"
	3688	[[ $keep_data_from_previous_run = true ]] && mrun_com=${mrun_com}" -k"
	3689	[[ "$additional_conditions" != "" ]] && mrun_com=${mrun_com}" -K \"$additional_conditions\""
	3690	# [[ "$makefile" != "$source_path/Makefile" ]] && mrun_com=${mrun_com}" -M \"$makefile\""
	3691	[[ "$output_list" != "" ]] && mrun_com=${mrun_com}" -o \"$output_list\""
	3692	[[ "$read_from_config" = false ]] && mrun_com=${mrun_com}" -S"
	3693	[[ $do_trace = true ]] && mrun_com=${mrun_com}" -x"
	3694	[[ "$numprocs" != "" ]] && mrun_com=${mrun_com}" -X $numprocs"
	3695	if [[ $use_openmp = true ]]
	3696	then
	3697	mrun_com=${mrun_com}" -O"
	3698	[[ "$tasks_per_node" != "" ]] && mrun_com=${mrun_com}" -T $threads_per_task"
	3699	else
	3700	[[ "$tasks_per_node" != "" ]] && mrun_com=${mrun_com}" -T $tasks_per_node"
	3701	fi
	3702	[[ $store_on_archive_system = false ]] && mrun_com=${mrun_com}" -A"
	3703	[[ $package_list != "" ]] && mrun_com=${mrun_com}" -p \"$package_list\""
	3704	[[ $return_password != "" ]] && mrun_com=${mrun_com}" -P $return_password"
	3705	[[ $delete_temporary_catalog = false ]] && mrun_com=${mrun_com}" -B"
[127]	3706	[[ $node_usage != default && "$(echo $node_usage \| cut -c1-3)" != "sla" && $node_usage != novice ]] && mrun_com=${mrun_com}" -n $node_usage"
[102]	3707	[[ $run_coupled_model = true ]] && mrun_com=${mrun_com}" -Y"
[1]	3708	if [[ $do_remote = true ]]
	3709	then
	3710	printf "\n>>>> MRUN-command on execution host:\n>>>> $mrun_com \n"
	3711	fi
	3712
	3713
	3714	# ZUSAMMENSTELLUNG DES JOBSCRIPTS AUF DATEI jobfile
	3715	jobfile=jobfile.$RANDOM
	3716
	3717
	3718	# TEMPORAERES VERZEICHNIS GENERIEREN UND NACH DORT WECHSELN
	3719	echo "mkdir $TEMPDIR" >> $jobfile
	3720	echo "cd $TEMPDIR" >> $jobfile
	3721
	3722
	3723	# EVENTUELL FEHLERVERFOLGUNG AKTIVIEREN
	3724	if [[ $do_trace = true ]]
	3725	then
	3726	echo "set -x" >> $jobfile
	3727	else
	3728	echo "set +vx" >> $jobfile
	3729	fi
	3730
	3731
	3732	# ABSPEICHERN DER QUELLTEXTE (NUR FALLS UEBERSETZT WERDEN SOLL)
	3733	# SOWIE GEGEBENENFALLS DES MAKEFILES
	3734	if [[ $do_compile = true ]]
	3735	then
	3736
	3737	source_catalog=SOURCES_FOR_RUN_$fname
	3738
	3739	# UNTERVERZEICHNIS FUER QUELLTEXTE UND MAKEFILE ANLEGEN
	3740	# MRUN WIRD DIESES VRZEICHNIS UEBER ENVIRONMENT VARIABLE
	3741	# MITGETEILT (UEBERSTEUERT ANGABE IN KONFIGURATIONSDATEI)
	3742	echo "mkdir SOURCES_FOR_RUN_$fname" >> $jobfile
	3743	echo "export SOURCES_COMPLETE=true" >> $jobfile
	3744	echo "cd SOURCES_FOR_RUN_$fname" >> $jobfile
	3745
	3746	for filename in $source_list
	3747	do
	3748	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
	3749	echo "cat > $filename << \"%END%\"" >> $jobfile
	3750	cat $source_catalog/$filename >> $jobfile
	3751	echo " " >> $jobfile
	3752	echo "%END%" >> $jobfile
	3753	echo " " >> $jobfile
	3754	done
	3755
[82]	3756	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
	3757	echo "cat > Makefile << \"%END%\"" >> $jobfile
	3758	cat $source_catalog/Makefile >> $jobfile
	3759	echo " " >> $jobfile
	3760	echo "%END%" >> $jobfile
	3761	echo " " >> $jobfile
[1]	3762
	3763	echo "cd - > /dev/null" >> $jobfile
	3764
	3765	fi
	3766
	3767
	3768	# ABSPEICHERN DER KONFIGURATIONSDATEI
	3769	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
	3770	echo "cat > $config_file << \"%END%\"" >> $jobfile
	3771	cat $config_file >> $jobfile
	3772	echo "%END%" >> $jobfile
	3773	echo " " >> $jobfile
	3774
	3775
	3776	# ABSPEICHERN DER AKTUELLEN MRUN-VERSION
	3777	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
	3778	echo "cat > $mrun_script_name <<\"%END%\"" >> $jobfile
[22]	3779	cat ${PALM_BIN}/$mrun_script_name >> $jobfile
[1]	3780	echo "%END%" >> $jobfile
	3781	if [[ $host = lctit ]]
	3782	then
	3783	echo "sed 's/bin\/ksh/home2\/usr5\/mkanda\/pub\/ksh/' < $mrun_script_name > mrun_new" >> $jobfile
	3784	echo "mv mrun_new $mrun_script_name" >> $jobfile
	3785	fi
	3786	echo "chmod u+x $mrun_script_name" >> $jobfile
	3787	echo "execute_mrun=true" >> $jobfile
	3788	echo " " >> $jobfile
	3789
	3790	# EVTL. BENOETIGTE INPUT-DATEIEN PER FTP HOLEN ODER DEM JOB DIREKT
	3791	# MITGEBEN UND AUF DEM REMOTE-RECHNER IM BENUTZERVERZEICHNIS ABLEGEN
	3792	# FALLS DIESES NICHT EXISTIERT, WIRD VERSUCHT, DAS JEWEILS LETZTE
	3793	# UNTERVERZEICHNIS DES PFADNAMENS ANZULEGEN
	3794	if [[ $do_remote = true ]]
	3795	then
	3796	(( i = 0 ))
	3797	while (( i < iin ))
	3798	do
	3799	(( i = i + 1 ))
	3800	echo "[[ ! -d ${pathin[$i]} ]] && mkdir -p ${pathin[$i]}" >> $jobfile
	3801	if [[ "${transin[$i]}" = job ]]
	3802	then
	3803	echo "cat > ${remotepathin[$i]} <<\"%END%\"" >> $jobfile
	3804	eval cat ${pathin[$i]}/${frelin[$i]} >> $jobfile
	3805	echo " " >> $jobfile
	3806	echo "%END%" >> $jobfile
	3807	else
[82]	3808	echo "batch_scp -b -o -g -s -u $return_username $return_addres ${remotepathin[$i]} \"${pathin[$i]}\" ${frelin[$i]}" >> $jobfile
[1]	3809	fi
	3810
	3811	# UEBERPRUEFEN, OB DATEI ANGELEGT WERDEN KONNTE
	3812	echo "if [[ \$? = 1 ]]" >> $jobfile
	3813	echo "then" >> $jobfile
	3814	echo " echo \" \" " >> $jobfile
	3815	echo " echo \"+++ file ${remotepathin[$i]} could not be created\" " >> $jobfile
	3816	echo " echo \" please check, if directory exists on $host!\" " >> $jobfile
	3817	echo " echo \"+++ MRUN will not be continued\" " >> $jobfile
	3818	echo " execute_mrun=false" >> $jobfile
	3819	echo "fi" >> $jobfile
	3820	done
	3821	fi
	3822
	3823	# ARBEITSKATALOG AUF DER LOKALEN MASCHINE FUER EVENTUELLE
	3824	# FORTSETZUNGSLAUEFE PER ENV-VARIABLE UEBERGEBEN
	3825	echo "LOCAL_PWD=$working_directory" >> $jobfile
	3826	echo "export LOCAL_PWD" >> $jobfile
	3827
	3828	# EBENSO LOKALEN MRUN-KATALOG UEBERGEBEN
[22]	3829	echo "LOCAL_MRUN_PATH=$PALM_BIN" >> $jobfile
[1]	3830	echo "export LOCAL_MRUN_PATH" >> $jobfile
	3831
[66]	3832	# WORKAROUND FUER RIAM-NEC-JOBS WEGEN PROFILE-SCHWIERIGKEITEN
[69]	3833	if [[ $localhost_realname = "gate" \|\| $localhost = lctit ]]
[66]	3834	then
	3835	echo "export PALM_BIN=$PALM_BIN" >> $jobfile
	3836	fi
[1]	3837
	3838	# MRUN AUF ZIELRECHNER AUFRUFEN
	3839	echo "set -x" >> $jobfile
	3840	echo "[[ \$execute_mrun = true ]] && ./$mrun_com" >> $jobfile
	3841
	3842	echo 'ls -al; echo `pwd`' >> $jobfile
	3843	echo "cd \$HOME" >> $jobfile
	3844	echo "rm -rf $TEMPDIR" >> $jobfile
	3845
	3846
	3847
	3848
	3849	# JOB PER SUBJOB STARTEN
	3850	if [[ $silent = false ]]
	3851	then
	3852	printf "\n "
	3853	else
	3854	printf "\n\n"
	3855	fi
	3856
[164]	3857	subjob $job_on_file -h $host -u $remote_username -g $group_number -q $queue -m $memory -N $node_usage -t $cpumax $XOPT $TOPT $OOPT -n $fname -v -c $job_catalog $jobfile
[1]	3858	rm -rf $jobfile
	3859
	3860
	3861	fi # ENDE REMOTE-TEIL
	3862
	3863
	3864
	3865	# ENDE DER PROZEDUR

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