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source: palm/trunk/SCRIPTS/mrun @ 182

Last change on this file since 182 was 182, checked in by raasch, 16 years ago
further mpi-version adjustments for sgi-ice
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File size: 144.5 KB

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1	#!/bin/ksh
2	# mrun - Plot-Shellskript
3	# $Id: mrun 182 2008-08-04 09:07:43Z raasch $
4
5	# Prozedur zum Starten von Modellaeufen
6
7	# letzte Aenderung:
8	# 03/03/94 - Siggi - Entwicklungsbeginn
9	# 21/03/94 - Siggi - Entwicklungsabschluss (Version 1.0)
10	# 09/12/94 - Siggi - allexport unterbunden; statt dessen werden jetzt ein-
11	# zelne Variable exportiert. Dies ist noetig, weil an-
12	# sonsten irgendein Speicher ueberlaeuft und von mrun
13	# aufgerufene Programme (z.B. stageout) mit Fehlern
14	# abbrechen (too many arguments)
15	# 20/06/95 - Siggi - noclobber muss explizit abgeschaltet, da jetzt
16	# defaultmaessig im RRZN-Profile eingeschaltet
17	# 10/06/97 - Siggi - Zusaetzliche Option -C bei cpp, damit // nicht
18	# wegfallen
19	# 25/04/00 - Siggi - Version 1.5
20	# remote_addres und remote_user in return_addres bzw.
21	# return_username umbenannt, return_username wird dem
22	# mrun-Aufruf im Job ueber Option -U mitgegeben.
23	# Neue Variable remote_username, die beim interaktiven
24	# mrun-Aufruf zwingend ueber die neue Option -u oder
25	# in der Konfigurationsdatei angegeben werden muss.
26	# 08/02/01 - Siggi - Alle mrun-Meldungen ins englische uebersetzt,
27	# Version 1.7
28	# 05/05/02 - Siggi - Uebersetzungen mittels make-Mechanismus moeglich
29	# 21/11/02 - Siggi - ENV-Variable XLFRTEOPTS wird vor Ausfuehrung auf
30	# IBM gesetzt, um Record-Laenge der NAMELIST-Dateien,
31	# zu bestimmen; Praeprozessoroptionen haben nun alle
32	# die Form -Dtext=text, weil auf IBM sonst text durch
33	# die leere Zeichenkette ersetzt wird
34	# 01/08/03 - Siggi - Test of implementing dvrp+1PE on ibm
35	# 07/01/04 - Siggi - additional preprocessor directive for ibm included
36	# (-D$OMP=OMP) in order to avoid problems with
37	# OMP_NUM_THREADS
38	# 04/01/05 - Siggi - archiving on hanni and berni is done in separate
39	# tar files, one for each node used
40	# 07/01/04 - Siggi - old code for t3e, vpp and hpcs eliminated
41	# 09/01/05 - Siggi - workaround for getting the IP address on gfdl3
42	# 17/01/05 - Siggi - job for data transfer to local machine now within
43	# job class c1 (HLRN)
44	# 27/01/05 - Siggi - IP address workaround for gfdl3 removed
45	# 28/01/05 - Siggi - tar-filenames on $PERM (HLRN) now include the
46	# base filename and cycle number
47	# 16/02/05 - Gerald - hababai validated
48	# 14/03/05 - Siggi - abort on NEC after first runtime error (F_ERRCNT)
49	# 29/03/05 - Marcus - berni*-en0 validated
50	# 21/04/05 - Siggi - transfer-job-protocol for avs-data is no more stored
51	# 24/04/05 - Siggi - netcdf support on lcmuk
52	# 25/04/05 - Siggi - netcdf support on gfld3 (decalpha)
53	# 11/05/05 - Siggi - files with non-numeric extensions (.xxx after cycle
54	# number) can now be used within interactive runs
55	# 12/05/05 - Siggi - netcdf support on ibm
56	# 13/05/05 - Siggi - error in tar-filenames on $PERM (HLRN) removed
57	# 18/05/05 - Siggi - netcdf support on nec
58	# 24/05/05 - Siggi - netcdf support on ibms
59	# 14/06/05 - Siggi - sleep interval after submit of restart job increased
60	# to 30 seconds
61	# 28/06/05 - Siggi - bora adjusted to new intel compiler (LD_LIBRARY_
62	# PATH is temporarily set)
63	# 07/09/05 - Siggi - setting of MP_EAGER_LIMIT switched off because it
64	# caused warnings in the job protocol
65	# 20/10/05 - Siggi - update of netcdf-version on decalpha (gfdl3)
66	# 25/10/05 - Siggi - error in listing files for getting the cycle number
67	# removed
68	# 26/10/05 - Siggi - new paths for dvrp-library, transfer of catalogs
69	# realized by file attribute trpe
70	# 28/10/05 - Siggi - if existing, the file extension is output in case
71	# of missing input file - no job abort in case of
72	# missing input files with file extensions
73	# (preliminary solution)
74	# 31/10/05 - Siggi - data transfer from nech now within seperate job
75	# 04/11/05 - Siggi - netcdf 3.6.0-p1 on ibmh/ibmb
76	# 07/12/05 - Siggi - gallego and elephanta admitted
77	# 30/12/05 - Siggi - gfdl5 (ibmy) admitted
78	# 10/01/06 - Siggi - cpp directive for NetCDF 64bit support
79	# 20/01/06 - Siggi - cpp directive for ibmy
80	# 09/02/06 - Siggi - ibmy admitted for batch mode
81	# 13/04/06 - Siggi - ostria admitted
82	# 18/04/06 - Siggi - usage of OpenMP implemented (additional option -O)
83	# 10/05/06 - Siggi - environment variable XLSMPOPTS set on IBM for
84	# optimization of OpenMP runs (option stacksize is
85	# necessary for large gridpoint numbers because
86	# otherwise a segmentation fault occurs)
87	# 23/05/05 - Siggi - lctit (SUN Fire X4600) admitted
88	# 21/08/06 - Siggi - standard mrun path on scirocco is as on bora
89	# 23/08/06 - Siggi - netcdf support for scirocco (notebook)
90	# 20/09/06 - Marcus - add DVRP library on nech
91	# 24/10/06 - Siggi - Environment variables for PALM steering are written
92	# on local NAMELIST file ENVPAR
93	# 24/11/06 - Siggi - levanto admitted, maestro switched to ifc 9.1
94	# 28/11/06 - Siggi - call to interpret_config.x_levanto because of SuSe 10
95	# 06/02/07 - Siggi - add DVRP library on lcmuk
96	# 07/02/07 - Siggi - revision of source code handling, source code is
97	# now expected in directory given by source_path and
98	# not in the current working directory, source code
99	# files provided in add_source_path are allways
100	# compiled, source code to be compiled is allways
101	# sampled in SOURCES_FOR_RUN_$fname which is a
102	# subdirectory of the current working directory,
103	# -s TEST changed to -s WRITE_PERMIT or -s WP,
104	# adapted for RIAM (neck)
105	# bugfix for cycle number of output file (extout)
106	# all hpmuk-related code removed
107	# 14/02/07 - Siggi - dvrp support for neck added
108	# 28/02/07 - Siggi - empty lines in configuration file are accepted
109	# mrun_path replaced by PALM_BIN,
110	# all machines are calling interpret_config.x
111	# 14/03/07 - Siggi - fimm admitted, revision number added to terminal
112	# output
113	# 16/03/07 - Siggi - adjustments for lctit
114	# 29/03/07 - Siggi - global revision transfered to batch job by new
115	# option -G
116	# 30/03/07 - Siggi - compilation "by hand" removed, cpp-directives/options
117	# + netcdf/dvrp-options are read from configuration
118	# file, host identifier (local_host) is read from
119	# config file, code related to ftp filetransfer
120	# removed (incl. option -f)
121	# 19/06/07 - Siggi - time limit for cdata jobs increased
122	# 25/07/07 - Siggi - two sets of executables can be started on lcmuk,
123	# if new option -Y (coupling) is given,
124	# output of executables to aout_output removed,
125	# messages are immediately written to stdout instead
126	# 03/08/07 - Marcus - add XOPT="-X $numprocs" for lcfimm
127	# 09/08/07 - Marcus - workaround on lcfimm to propagate environment
128	# variables out to the nodes in coupled mode -disabled-
129	# 13/08/07 - Marcus - start local restart jobs per ssh on lcfimm
130	# 28/08/07 - Marcus - completely remove workaround on lcfimm to propagate
131	# environment variables out to the nodes in coupled mode
132	# 15/10/07 - Siggi - Preliminary adjustments for lctit, based on Jin's
133	# suggestions
134	# 19/10/07 - Marcus - further adjustments for lctit: add new optional
135	# argument -g group_number, admit all sla* node_usage
136	# queues
137	# 30/10/07 - Marcus - further adjustments for queues on lctit
138	# 14/02/08 - Bjoern - link of restart files with long file name possible
139	# 28/02/08 - Marcus - If environment variable link_local_output is set to
140	# true, mrun tries "ln -f" on local output and resorts
141	# to "cp" or "cp -r" on error
142	# 15/04/08 - Siggi - argument -c introduced to most of the subjob calls,
143	# which allows the user to choose his own job catalog
144	# by setting job_catalog in the configuration file
145	# (default is ~/job_queue),
146	# workaround for mpiexec with -env option,
147	# adjustments for lcxt4 (Bergen Center for Computational
148	# Science)
149	# 27/05/08 - Siggi - PATH is set to PALM_BIN everywhere (missing so far)
150	# 14/07/08 - Siggi - adjustments for lcsgih
151
152
153	# VARIABLENVEREINBARUNGEN + DEFAULTWERTE
154
155	set +o allexport # SICHERHEITSHALBER UNTERBINDEN, DA SONST EVTL. STAGEOUT
156	# NICHT LAUEFT (TOO MANY ARGUMENTS - PROBLEM)
157	set +o noclobber # EXISTIERENDE DATEIEN DUERFEN UEBERSCHRIEBEN WERDEN
158
159	AddFilenames=""
160	additional_conditions=""
161	add_source_path=""
162	afname=""
163	archive_save=true
164	archive_system=none
165	compiler_name=""
166	cond1=""
167	cond2=""
168	config_file=.mrun.config
169	cpp_opts=""
170	cpp_options=""
171	cpumax=0
172	cpurest=0
173	delete_temporary_catalog=true
174	do_batch=false
175	do_compile=true
176	do_remote=false
177	do_stagein=true
178	do_stageout=true
179	do_trace=false
180	email_notification=""
181	exclude=""
182	executable=""
183	execution_error=false
184	fimm=false
185	fname=test
186	fromhost=""
187	global_revision=""
188	group_number=none
189	host=""
190	host_file=""
191	hp=""
192	ignore_archive_error=false
193	input_list=""
194	interpreted_config_file=""
195	job_catalog="~/job_queue"
196	job_on_file=""
197	keep_data_from_previous_run=false
198	link_local_output=false
199	localhost_realname=$(hostname)
200	local_compile=false
201	locat=normal
202	mainprog=""
203	makefile=""
204	mc=$0
205	while [[ $(echo $mc \| grep -c "/") != 0 ]]
206	do
207	mc=`echo $mc \| cut -f2- -d"/"`
208	done
209	module_files=""
210	mrun_script_name=$mc
211	netcdf_inc=""
212	netcdf_lib=""
213	netcdf_support=false
214	node_usage=default
215	numprocs=""
216	OOPT=""
217	openmp=false
218	output_list=""
219	package_list=""
220	punkte="..........................................................."
221	queue=none
222	read_from_config=""
223	restart_run=false
224	return_addres=$(nslookup `hostname` 2>&1 \| grep "Address:" \| tail -1 \| awk '{print $2}')
225	if [[ $return_addres = 130.75.105.158 ]]
226	then
227	return_addres=172.20.25.41
228	echo "+++ WARNING: return_addres changed to $return_addres !!!!!"
229	fi
230	# if [[ $return_addres = 210.117.65.1 ]]
231	# if [[ $(nslookup `hostname` 2>&1 \| grep -c 210.117.65.1) = 1 ]]
232	# then
233	# [[ $localhost_realname = gfdl3.yonsei.ac.kr ]] && return_addres=165.132.26.56
234	# fi
235	return_password=""
236	return_username=$LOGNAME
237	remotecall=false
238	remote_username=""
239	run_coupled_model=false
240	run_mode=""
241	scirocco=false
242	store_on_archive_system=true
243	striche=" ----------------------------------------------------------------------------"
244	silent=false
245	source_list=""
246	source_path=SOURCE
247	tasks_per_node=""
248	threads_per_task=1
249	tmpcreate=false
250	tmp_data_catalog=""
251	transfer_problems=false
252	usern=$LOGNAME
253	working_directory=`pwd`
254	TOPT=""
255	XOPT=""
256	zeit=$( date \| cut -c 12-19 )
257
258	typeset -i iec=0 iic=0 iin=0 ioc=0 iout=0 memory=0 stagein_anz=0 stageout_anz=0
259	typeset -i cputime i ii iii icycle inode ival jobges jobsek maxcycle minuten nodes pes sekunden tp1
260
261	typeset -R30 calltime
262	typeset -L20 spalte1
263	typeset -L40 spalte2
264	typeset -L60 spalte3
265	typeset -L35 string1=`date`
266	typeset -L12 string2=$usern
267	typeset -L12 string3=$localhost_realname
268	typeset -L12 string4
269	typeset -L12 string5
270	typeset -L30 version="MRUN 2.0 Rev$Rev: 164 $"
271
272
273
274	# EINZELNE VARIABLE FUER HAUPTPROGRAMM EXPORTIEREN
275	export cpurest fname host localhost return_addres return_username remotecall tasks_per_node
276
277	# FOLGENDE VARIABLEN MUESSEN FUER DIE INTERPRETATION DER KONFIGURATIONSDATEI
278	# EXPORTIERT WERDEN
279	export afname config_file cpp_opts cpumax do_batch do_trace fname fromhost
280	export group_number input_list memory numprocs output_list queue run_mode
281
282
283
284	# FEHLERBEHANDLUNG
285	# BEI EXIT:
286	trap 'rm -rf $working_directory/tmp_mrun
287	if [[ $locat != localhost ]]
288	then
289	# if [[ ! -f ${mrun_path}/statistik/mrun_statistik ]]
290	# then
291	# cat > ${mrun_path}/statistik/mrun_statistik << %STATEND%
292	#MRUN-calls on $localhost
293	#
294	#date and time user localhost remotehost termination mrun-command
295	#--------------------------------------------------------------------------------------------------------------------
296	#%STATEND%
297	# chmod 666 ${mrun_path}/statistik/mrun_statistik
298	# fi
299	#
300	# # EINTRAG IN DIE STATISTIK-DATEI
301	# string4=$host
302	# string5=$locat
303	# if [[ "$job_on_file" = "" && $locat != control_c && $locat != user_abort ]]
304	# then
305	# if [[ $do_batch = true ]]
306	# then
307	# printf "$string1$string2$string3$string4$string5$mrun_com \n" >> ${mrun_path}/statistik/mrun_statistik
308	# else
309	# printf "$string1$string2$string3$string4$string5$mc \n" >> ${mrun_path}/statistik/mrun_statistik
310	# fi
311	# fi
312	echo " " > /dev/null
313	fi
314
315	if [[ $locat != normal && $locat != control_c && $locat != local_compile ]]
316	then
317
318	# EVENTUELLE ERROR-KOMMANDOS ABARBEITEN
319	(( i = 0 ))
320	while (( i < iec ))
321	do
322	(( i = i + 1 ))
323	printf "\n *** Execution of ERROR-command:\n"
324	printf " >>> ${err_command[$i]}\n"
325	eval ${err_command[$i]}
326	done
327	if [[ -n $interpreted_config_file ]] then
328	rm -rf $interpreted_config_file
329	fi
330	if [[ -n .mrun_environment ]] then
331	rm -rf .mrun_environment
332	fi
333	if [[ $tmpcreate = true ]]
334	then
335	printf "\n *** Contents of \"$TEMPDIR\":\n"
336	ls -al; cd
337	[[ $delete_temporary_catalog = true ]] && rm -rf $TEMPDIR
338	fi
339	if [[ -f ~/job_queue/JOBINFO.$QSUB_REQID ]]
340	then
341	rm -rf ~/job_queue/JOBINFO.$QSUB_REQID
342	fi
343	printf "\n\n+++ MRUN killed \n\n"
344	elif [[ $locat != control_c ]]
345	then
346	printf "\n\n --> all actions finished\n\n"
347	printf " Bye, bye $usern !!\n\n"
348	fi' exit
349
350
351	# BEI TERMINAL-BREAK:
352	trap 'rm -rf $working_directory/tmp_mrun
353	[[ $tmpcreate = true ]] && (cd; rm -rf $TEMPDIR)
354	if [[ -f ~/job_queue/JOBINFO.$QSUB_REQID ]]
355	then
356	rm -rf ~/job_queue/JOBINFO.$QSUB_REQID
357	fi
358	printf "\n+++ MRUN killed by \"^C\" \n\n"
359	locat=control_c
360	exit
361	' 2
362
363
364	# CHECK IF THE PATH FOR THE PALM BINARIES (SCRIPTS+UTILITY-PROGRAMS) HAS
365	# BEEN SET
366	if [[ "$PALM_BIN" = "" ]]
367	then
368	printf "\n +++ environment variable PALM_BIN has not been set"
369	printf "\n please set it to the directory where the PALM scripts are located"
370	locat=palm_bin; exit
371	fi
372	export PATH=$PALM_BIN:$PATH
373
374
375
376	# SHELLSCRIPT-OPTIONEN EINLESEN UND KOMMANDO NEU ZUSAMMENSETZEN, FALLS ES
377	# FUER FOLGEJOBS BENOETIGT WIRD
378	while getopts :a:AbBc:Cd:D:Fg:G:h:H:i:IkK:m:M:n:o:Op:P:q:r:R:s:St:T:u:U:vxX:Y option
379	do
380	case $option in
381	(a) afname=$OPTARG;;
382	(A) store_on_archive_system=false; mc="$mc -A";;
383	(b) do_batch=true; mc="$mc -b";;
384	(B) delete_temporary_catalog=false; mc="$mc -B";;
385	(c) config_file=$OPTARG; mc="$mc -c$OPTARG";;
386	(C) restart_run=true; mc="$mc -C";;
387	(d) fname=$OPTARG; mc="$mc -d$OPTARG";;
388	(D) cpp_opts="$cpp_opts $OPTARG"; mc="$mc -D$OPTARG";;
389	(F) job_on_file="-D"; mc="$mc -F";;
390	(g) group_number=$OPTARG; mc="$mc -g$OPTARG";;
391	(G) global_revision=$OPTARG; mc="$mc -G'$OPTARG'";;
392	(h) host=$OPTARG; mc="$mc -h$OPTARG";;
393	(H) fromhost=$OPTARG; mc="$mc -H$OPTARG";;
394	(i) input_list=$OPTARG; mc="$mc -i'$OPTARG'";;
395	(I) ignore_archive_error=true; mc="$mc -I";;
396	(k) keep_data_from_previous_run=true; mc="$mc -k";;
397	(K) additional_conditions="$OPTARG"; mc="$mc -K$OPTARG";;
398	(m) memory=$OPTARG; mc="$mc -m$OPTARG";;
399	(M) makefile=$OPTARG; mc="$mc -M$OPTARG";;
400	(n) node_usage=$OPTARG; mc="$mc -n$OPTARG";;
401	(o) output_list=$OPTARG; mc="$mc -o'$OPTARG'";;
402	(O) use_openmp=true; mc="$mc -O";;
403	(p) package_list=$OPTARG; mc="$mc -p'$OPTARG'";;
404	(P) return_password=$OPTARG; mc="$mc -P$OPTARG";;
405	(q) queue=$OPTARG; mc="$mc -q$OPTARG";;
406	(r) run_mode=$OPTARG; mc="$mc -r'$OPTARG'";;
407	(R) remotecall=true;return_addres=$OPTARG; mc="$mc -R$OPTARG";;
408	(s) source_list=$OPTARG; mc="$mc -s'$OPTARG'";;
409	(S) read_from_config=false; mc="$mc -S";;
410	(t) cpumax=$OPTARG; mc="$mc -t$OPTARG";;
411	(T) tasks_per_node=$OPTARG; mc="$mc -T$OPTARG";;
412	(u) remote_username=$OPTARG; mc="$mc -u$OPTARG";;
413	(U) return_username=$OPTARG; mc="$mc -U$OPTARG";;
414	(v) silent=true; mc="$mc -v";;
415	(x) do_trace=true;set -x; mc="$mc -x";;
416	(X) numprocs=$OPTARG; mc="$mc -X$OPTARG";;
417	(Y) run_coupled_model=true; mc="$mc -Y";;
418	(\?) printf "\n +++ unknown option $OPTARG \n"
419	printf "\n --> type \"$0 ?\" for available options \n"
420	locat=parameter;exit;;
421	esac
422	done
423
424
425	# EVTL. POSITIONSPARAMETER EINLESEN
426	# ZUR ZEIT GIBT ES NUR DEN PARAMETER ? (=KURZINFO)
427	shift OPTIND-1
428
429
430	# KURZE AUFRUFBESCHREIBUNG WIRD HIER AUSGEGEBEN
431	if [[ "$1" = "?" ]]
432	then
433	(printf "\n *** mrun can be called as follows:\n"
434	printf "\n $mrun_script_name -b -c.. -d.. -D.. -f.. -F -h.. -i.. -I -K.. -m.. -o.. -p.. -r.. -R -s.. -t.. -T.. -v -x -X.. <modus>\n"
435	printf "\n Description of available options:\n"
436	printf "\n Option Description Default-Value"
437	printf "\n -a base name of input files equiv. -d"
438	printf "\n -A no archiving when using file-attribute fl"
439	printf "\n -b batch-job on local machine ---"
440	printf "\n -B do not delete temporary directory at end ---"
441	printf "\n -c configuration file .mrun.config"
442	printf "\n -d base name of files attached to program test"
443	printf "\n -D preprocessor(cpp)-directives \"\" "
444	printf "\n -F create remote job file only ---"
445	printf "\n -h execution host $localhost_realname"
446	printf "\n -i INPUT control list \"\" "
447	printf "\n -I archiving errors of previous batch-jobs"
448	printf "\n will be ignored"
449	printf "\n -k keep data from previous run"
450	printf "\n -K additional conditions for controling"
451	printf "\n usage of conditional code and"
452	printf "\n env-variables in configuration file \"\" "
453	printf "\n -m memory demand in MB (batch-jobs) 0 MB"
454	printf "\n -M Makefile name Makefile"
455	printf "\n -n node usage (shared/not_shared) depending on -h"
456	printf "\n -o OUTPUT control list \"\" "
457	printf "\n -O use OpenMP ---"
458	printf "\n -p software package list \"\" "
459	printf "\n -q queue \"$queue\" "
460	printf "\n -r run control list (combines -i -o) \"\" "
461	printf "\n -s filenames of routines to be compiled \"\" "
462	printf "\n must end with .f, .f90, .F, or .c !"
463	printf "\n use \"..\" for more than one file and wildcards"
464	printf "\n -s TEST compiles all files with w-permit"
465	printf "\n -S config file interpreted by shellscript ---"
466	printf "\n -t allowed cpu-time in seconds (batch) 0"
467	printf "\n -T tasks per node depending on -h"
468	printf "\n -u username on remote machine \"\" "
469	printf "\n -v no prompt for confirmation ---"
470	printf "\n -x tracing of mrun for debug purposes ---"
471	printf "\n -X # of processors (on parallel machines) 1"
472	printf "\n -Y run coupled model ---"
473	printf "\n "
474	printf "\n Possible values of positional parameter <modus>:"
475	printf "\n \"?\" - this outline \n\n") \| more
476	exit
477	elif [[ "$1" != "" ]]
478	then
479	printf "\n +++ positional parameter $1 unknown \n"
480	locat=parameter; exit
481	fi
482
483
484
485	# KURZE STARTMELDUNG
486	printf "\n*** $version "
487	printf "\n will be executed. Please wait ..."
488
489
490
491	# PRUEFEN, OB KONFIGURATIONS-DATEI VORHANDEN
492	if [[ ! -f $config_file ]]
493	then
494	printf "\n\n +++ configuration file: "
495	printf "\n $config_file"
496	printf "\n does not exist"
497	locat=connect; exit
498	fi
499
500
501	# HOST-IDENTIFIER (local_host) AUS KONFIGURATIONSDATEI BESTIMMEN
502	line=""
503	grep "%host_identifier" $config_file > tmp_mrun
504	while read line
505	do
506	if [[ "$line" != "" \|\| $(echo $line \| cut -c1) != "#" ]]
507	then
508	HOSTNAME=`echo $line \| cut -d" " -s -f2`
509	host_identifier=`echo $line \| cut -d" " -s -f3`
510	if [[ $localhost_realname = $HOSTNAME ]]
511	then
512	localhost=$host_identifier
513	break
514	fi
515	fi
516	done < tmp_mrun
517
518	if [[ "$localhost" = "" ]]
519	then
520	printf "\n\n +++ no host identifier found in configuration file \"$config_file\""
521	printf "\n for local host \"$localhost_realname\"."
522	printf "\n Please add line"
523	printf "\n \"\%host_identifier $localhost_realname <identifier>\""
524	printf "\n to the configuration file."
525	locat=localhost; exit
526	fi
527
528
529
530	# HOSTSPEZIFISCHE VARIABLEN SETZEN
531	case $localhost_realname in
532	(breg-en0\|berni-en0) archive_system=tivoli;;
533	(cs*) archive_system=ut;;
534	(fimm.bccs.uib.no) fimm=true;;
535	(gate\|n-sx) PATH=$PALM_BIN:$PATH:/usr/bin/nqsII;;
536	(hreg-en0\|hanni-en0) archive_system=tivoli;;
537	(scirocco) scirocco=true;;
538	esac
539
540
541
542	# BASISNAME DER INPUT-DATEIEN GLEICH ALLGEMEINEM BASISNAMEN SETZEN,
543	# WENN NICHT VOM BENUTZER ANDERS BESTIMMT
544	[[ "$afname" = "" ]] && afname=$fname
545
546
547	# EVTL. RUN-MODUS DEN I/O-LISTEN HINZUFUEGEN
548	if [[ "$run_mode" != "" ]]
549	then
550	input_list="$input_list $run_mode"
551	output_list="$output_list $run_mode"
552	fi
553
554
555	# RECHNERNAMEN ABSPEICHERN, VON DEM AUS JOB GESTARTET WIRD,
556	# ALLERDINGS NUR DANN, WENN NICHT PER OPTION -H BEREITS EIN WERT
557	# ZUGEWIESEN WURDE (MRUN MACHT DIES IMMER, WENN ES SELBST BATCH-JOBS
558	# STARTET)
559	if [[ "$fromhost" = "" ]]
560	then
561	fromhost=$localhost
562	fi
563
564
565	# PRUEFEN, OB MRUN NUR TESTWEISE AUF DER LOKALEN MASCHINE KOMPILIEREN SOLL
566	if [[ "$source_list" = LOCAL_COMPILE_TEST ]]
567	then
568	source_list=TEST
569	local_compile=true
570	host=$localhost
571	fi
572
573
574	# PRUEFEN, OB AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL
575	# WERT VON do_remote WIRD FUER DATEIVERBINDUNGEN BENOETIGT.
576	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
577	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
578	if [[ -n $host && "$host" != $localhost ]]
579	then
580	do_batch=true
581	do_remote=true
582	case $host in
583	(ibm\|ibmb\|ibmh\|ibms\|ibmy\|nech\|neck\|lcsgib\|lcsgih\|lctit\|unics) true;;
584	(*) printf "\n"
585	printf "\n +++ sorry: execution of batch jobs on remote host \"$host\""
586	printf "\n is not available"
587	locat=nqs; (( iec = 0 )); exit;;
588	esac
589	else
590	host=$localhost
591	fi
592
593
594	# ZUSATZBEDINGUNGEN (OPTION -K) AUSWERTEN
595	if [[ -n $additional_conditions ]]
596	then
597	# echo $additional_conditions \| cut -d" " -f1-3 \| read cond1 cond2 dummy
598	cond1=`echo $additional_conditions \| cut -d" " -f1`
599	cond2=`echo $additional_conditions \| cut -d" " -s -f2`
600	dummy=`echo $additional_conditions \| cut -d" " -s -f3`
601	if [[ -n $dummy ]]
602	then
603	printf "\n +++ more than 2 additional conditions given for Option \"-K\""
604	locat=options; exit
605	fi
606	fi
607
608
609	# PRUEFEN, OB EVTL. BEI VORHERGEHENDEM LAUF (KETTENJOB) EINE
610	# ARCHIVIERUNG FEHLGESCHLAGEN IST
611	if [[ -f ~/job_queue/ARCHIVE_ERROR_$fname ]]
612	then
613	if [[ $ignore_archive_error = false ]]
614	then
615	printf "\n +++ data archiving of previous run failed"
616	printf "\n see directory \~/job_queue on remote machine"
617	locat=archive; exit
618	else
619	printf "\n +++ warning: data archiving in a previous run failed"
620	printf "\n MRUN continues, trying to get backup copy"
621	fi
622	fi
623
624
625
626	# LESEN UND INTERPRETIEREN DER KONFIGURATIONS-DATEI VOM SHELLSCRIPT AUS
627	# VORUEBERGEHEND ZWINGEND AUF LINUX-RECHNERN
628	if [[ "$read_from_config" = false ]]
629	then
630
631	[[ $silent = false ]] && printf "\n Reading the configuration file... "
632	while read zeile
633	do
634	[[ $silent = false ]] && printf "."
635
636
637	# ZUERST EVENTUELL VORKOMMENDE ENVIRONMENT-VARIABLEN DURCH IHRE WERTE
638	# ERSETZEN
639	eval zeile=\"$zeile\"
640
641
642	# INTERPRETATION DER ZEILE
643	if [[ "$(echo $zeile)" = "" ]]
644	then
645	# LEERZEILE, KEINE AKTION
646	continue
647
648	elif [[ "$(echo $zeile \| cut -c1)" = "#" ]]
649	then
650
651	# ZEILE IST KOMMENTARZEILE
652	true
653
654	elif [[ "$(echo $zeile \| cut -c1)" = "%" ]]
655	then
656
657	# ZEILE DEFINIERT ENVIRONMENT-VARIABLE
658	zeile=$(echo $zeile \| cut -c2-)
659	# echo $zeile \| cut -d" " -f1-5 \| read var value for_host for_cond1 for_cond2
660	var=`echo $zeile \| cut -d" " -f1`
661	value=`echo $zeile \| cut -d" " -s -f2`
662	for_host=`echo $zeile \| cut -d" " -s -f3`
663	for_cond1=`echo $zeile \| cut -d" " -s -f4`
664	for_cond2=`echo $zeile \| cut -d" " -s -f5`
665
666	if [[ "$for_host" = "" \|\| ( "$for_host" = $host && "$for_cond1" = "$cond1" && "$for_cond2" = "$cond2" ) \|\| $(echo "$input_list$output_list"\|grep -c "$for_host") != 0 ]]
667	then
668
669	# BEI COMPILER- CPP- ODER LINKEROPTIONEN EVTL ":" DURCH " "
670	# ERSETZEN. "::" WIRD DURCH ":" ERSETZT.
671	value=`echo $value \| sed 's/::/%DUM%/g' \| sed 's/:/ /g' \| sed 's/%DUM%/:/g'`
672
673
674	# ENVIRONMENT-VARIABLE WIRD WERT AUS KONFIGURATIONSDATEI
675	# ZUGEWIESEN, WENN SIE SELBST NOCH KEINEN WERT UEBER DIE
676	# ENTSPRECHENDE SCRIPT-OPTION ERHALTEN HAT. SOLCHE
677	# VARIABLEN HAETTEN DANN DEN WERT "" ODER IM INTEGER-FALL DEN
678	# WERT 0. ALLGEMEINE REGEL ALSO: SCRIPT-OPTION GEHT UEBER
679	# KONFIGURATIONSDATEI
680	if [[ "$(eval echo \$$var)" = "" \|\| "$(eval echo \$$var)" = "0" ]]
681	then
682	eval $var=\$value
683
684	# EVTL. BILDSCHIRMAUSGABEN DER ENVIRONMENT-VARIABLEN
685	if [[ $do_trace = true ]]
686	then
687	printf "\n*** ENVIRONMENT-VARIABLE $var = $value"
688	fi
689	fi
690
691	# WENN ENVIRONMENT-VARIABLE HOST VEREINBART, DANN SOFORT AUSWERTEN
692	# WERT VON do-remote WIRD BEI DATEIVERBINDUNGEN BENOETIGT
693	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
694	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
695	if [[ $var = host ]]
696	then
697	if [[ -n $host && "$host" != $localhost ]]
698	then
699	do_batch=true
700	do_remote=true
701	case $host in
702	(ibm\|ibms\|ibmy\|lcsgib\|lcsgih\|lctit\|nech\|neck\|unics) true;;
703	(*) printf "\n +++ sorry: execution of batch jobs on remote host \"$host\""
704	printf "\n is not available"
705	locat=nqs; exit;;
706	esac
707	else
708	host=$localhost
709	fi
710	fi
711
712	# VOM BENUTZER DEFINIERTE ENVIRONMENT VARIABLEN MUESSEN PRINZIPIELL
713	# EXPORTIERT WERDEN, DA SIE VIELLEICHT IN WEITER UNTEN AUFZURUFEN-
714	# DEN PROGRAMMEN BENOETIGT WERDEN
715	export $var
716	fi
717
718
719
720
721	elif [[ "$(echo $zeile \| cut -c1-3)" = "EC:" ]]
722	then
723
724	# ZEILE DEFINIERT ERROR-KOMMANDO
725	(( iec = iec + 1 ))
726	zeile=$(echo $zeile \| cut -c4-)
727	err_command[$iec]="$zeile"
728
729	elif [[ "$(echo $zeile \| cut -c1-3)" = "IC:" ]]
730	then
731
732	# ZEILE DEFINIERT INPUT-KOMMANDO
733	(( iic = iic + 1 ))
734	zeile=$(echo $zeile \| cut -c4-)
735	in_command[$iic]="$zeile"
736
737	elif [[ "$(echo $zeile \| cut -c1-3)" = "OC:" ]]
738	then
739
740	# ZEILE DEFINIERT OUTPUT-KOMMANDO
741	(( ioc = ioc + 1 ))
742	zeile=$(echo $zeile \| cut -c4-)
743	out_command[$ioc]="$zeile"
744
745	else
746
747	# ZEILE DEFINIERT DATEIVERBINDUNG. EINLESEN DER DATEIEIGENSCHAFTEN
748	# s2a: in/out - Feld
749	# s2b: loc - Feld (optional)
750	# s2c: tr/ar - Feld (optional)
751	# echo $zeile \| cut -d" " -f1-2 \| read s1 s2
752	s1=`echo $zeile \| cut -d" " -f1`
753	s2=`echo $zeile \| cut -d" " -s -f2`
754	s2a=$(echo $s2 \| cut -d":" -f1)
755	if [[ $(echo $s2 \| grep -c ":") = 0 ]]
756	then
757	s2b=""
758	s2c=""
759	else
760	# echo $s2 \| cut -d":" -f2-3 \| sed 's/:/ /g' \| read s2b s2c
761	s2b=`echo $s2 \| cut -d":" -f2 \| sed 's/:/ /g'`
762	s2c=`echo $s2 \| cut -d":" -s -f3 \| sed 's/:/ /g'`
763	fi
764	# echo $zeile \| cut -d" " -f3-6 \| read s3 s4 s5 s6
765	s3=`echo $zeile \| cut -d" " -f3`
766	s4=`echo $zeile \| cut -d" " -s -f4`
767	s5=`echo $zeile \| cut -d" " -s -f5`
768	s6=`echo $zeile \| cut -d" " -s -f6`
769
770
771	# ABSPEICHERN DER DATEIVERBINDUNG, FALLS IN INPUT- ODER OUTPUT-LIST
772	# VERMERKT. VARIABLE S3 KANN AUCH LISTE ENTHALTEN (FELDTRENNER ":")
773	# DATEIVERBINDUNG WIRD DANN NICHT ABGESPEICHERT UND GEPRUEFT, WENN
774	# PROGRAMMLAUF AUF REMOTE-MASCHINE ERFOLGT UND DATEI NUR LOKAL VOR-
775	# HANDEN SEIN MUSS (D.H. s2b = loc)
776	IFSALT="$IFS"; IFS="$IFS:"
777	if [[ "$s2a" = in && ! ( $do_remote = true && ( "$s2b" = loc \|\| "$s2b" = locopt ) ) ]]
778	then
779	found=false
780	for actual in $input_list
781	do
782	for formal in $s3
783	do
784	[[ $actual = $formal \|\| "$formal" = "-" ]] && found=true
785	done
786	done
787	if [[ $found = true ]]
788	then
789	(( iin = iin + 1 ))
790	localin[$iin]=$s1; transin[$iin]=$s2b; actionin[$iin]=$s2c;
791	typein[$iin]=$s3; pathin[$iin]=$s4; endin[$iin]=$s5;
792	extin[$iin]=$s6
793	fi
794	elif [[ "$s2a" = out && ! ( $do_remote = true && "$s2b" = loc ) ]]
795	then
796	found=false
797	for actual in $output_list
798	do
799	for formal in $s3
800	do
801	[[ $actual = $formal \|\| "$formal" = "-" ]] && found=true
802	done
803	done
804	if [[ $found = true ]]
805	then
806	(( iout = iout + 1 ))
807	localout[$iout]=$s1; actionout[$iout]=$s2c; typeout[$iout]=$s3;
808	pathout[$iout]=$s4; endout[$iout]=$s5; extout[$iout]=$s6
809	fi
810	elif [[ "$s2a" != in && "$s2a" != out ]]
811	then
812	printf "\n +++ I/O-attribute in configuration file $config_file has the invalid"
813	printf "\n value \"$s2\". Only \"in\" and \"out\" are allowed!"
814	locat=connect; exit
815	fi
816	IFS="$IFSALT"
817	fi
818	done < $config_file
819
820	else
821
822
823	# INTERPRETATION DER KONFIGURATIONSDATEI MITTELS FORTRAN 90 - PROGRAMM
824	[[ $silent = false ]] && printf "..."
825	export cond1 cond2 config_file do_remote do_trace input_list localhost output_list
826	export interpreted_config_file=.icf.$RANDOM
827
828
829
830	# ENVIRONMENT-VARIABLEN FUER INTERPRET_CONFIG UEBER NAMELIST_DATEI ZUR
831	# VERFUEGUNG STELLEN
832	cat > .mrun_environment << %%END%%
833	&mrun_environment cond1 = '$cond1', cond2 = '$cond2',
834	config_file = '$config_file', do_remote = '$do_remote',
835	do_trace = '$do_trace', host = '$host',
836	input_list = '$input_list', icf = '$interpreted_config_file',
837	localhost = '$localhost', output_list = '$output_list' /
838
839	%%END%%
840
841	# WERTE VON MRUN-OPTIONEN SICHERN UND DAMIT GEGEBENENFALLS SPAETER DIE
842	# IN DER KONFIGURAIONSDATEI ANGEGEBENEN WERTE UEBERSTEUERN
843	mrun_memory=$memory
844	mrun_group_number=$group_number
845	mrun_cpumax=$cpumax
846	mrun_numprocs=$numprocs
847
848	if [[ $localhost_realname = "gate" ]]
849	then
850	interpret_config_gate.x
851	else
852	interpret_config.x
853	fi
854	rm .mrun_environment
855
856
857	# AUSFUEHRUNG DER GENERIERTEN SHELL-KOMMANDOS IN DIESER SHELL
858	chmod u+x $interpreted_config_file
859	export PATH=$PATH:.
860	. $interpreted_config_file
861	rm $interpreted_config_file
862
863
864	# OPTIONSWERTE UEBERSTEUERN KONFIGURATIONSDATEI
865	[[ $mrun_memory != 0 ]] && memory=$mrun_memory
866	[[ "$mrun_group_number" != "none" ]] && group_number=$mrun_group_number
867	[[ $mrun_cpumax != 0 ]] && cpumax=$mrun_cpumax
868	[[ "$mrun_numprocs" != "" ]] && numprocs=$mrun_numprocs
869
870	fi
871
872
873	# QUELLTEXTVERZEICHNIS AUF LOKALER MASCHINE AUS KONFIGURATIONSDATEI
874	# BESTIMMEN (WUERDE SONST EVTL. DAS VERZEICHNIS DES JEWEILS UNTER -h
875	# ANGEGEBENEN REMOTE-RECHNERS SEIN)
876	# BEI BATCH-JOBS SIND DIE ZU UEBERSETZENDEN PROGRAMMTEILE SCHON KOMPLETT
877	if [[ "$SOURCES_COMPLETE" = "" ]]
878	then
879
880	# ZUERST PRUEFEN, OB EIN GLOBALER QUELLTEXTPFAD FUER ALLE RECHNER
881	# VEREINBART WURDE
882	source_path=""
883	line=""
884	grep "%source_path" $config_file > tmp_mrun
885	while read line
886	do
887	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
888	then
889	if [[ "$(echo $line \| cut -d" " -f3)" = "" ]]
890	then
891	global_source_path=`echo $line \| cut -d" " -f2`
892	fi
893	fi
894	done < tmp_mrun
895
896	line=""
897	found=false
898	grep " $localhost" $config_file \| grep "%source_path" > tmp_mrun
899	while read line
900	do
901	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
902	then
903	if [[ $found = true ]]
904	then
905	printf "\n\n +++ more than one source path found in configuration file"
906	printf "\n for local host \"$localhost\" "
907	locat=source_path; exit
908	fi
909	source_path=`echo $line \| cut -d" " -f2`
910	found=true
911	fi
912	done < tmp_mrun
913	rm tmp_mrun
914
915	if [[ "$source_path" = "" ]]
916	then
917	if [[ "$global_source_path" != "" ]]
918	then
919	source_path=$global_source_path
920	else
921	printf "\n\n +++ no source path found in configuration file"
922	printf "\n for local host \"$localhost\" "
923	locat=source_path; exit
924	fi
925	fi
926	eval source_path=$source_path
927
928	if [[ ! -d $source_path ]]
929	then
930	printf "\n\n +++ source path \"$source_path\" on local host"
931	printf "\n \"$localhost\" does not exist"
932	locat=source_path; exit
933	fi
934
935	fi
936
937
938	# GLOBALE REVISIONSNUMMER ERMITTELN (FORTSETZUNGSLAEUFEN WIRD DIESE
939	# DURCH OPTION -G MITGETEILT)
940	if [[ "$global_revision" = "" ]]
941	then
942	global_revision=`svnversion $source_path 2>/dev/null`
943	global_revision="Rev: $global_revision"
944	fi
945
946
947	# NOCHMAL PRUEFEN, OB AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL
948	# (HOST KANN IN KONFIGURATIONSDATEI ANDERS FESTGELEGT WORDEN SEIN)
949	# WERT VON do_remote WIRD FUER DATEIVERBINDUNGEN BENOETIGT.
950	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
951	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
952	if [[ -n $host && "$host" != $localhost ]]
953	then
954	do_batch=true
955	do_remote=true
956	case $host in
957	(ibm\|ibmb\|ibmh\|ibms\|ibmy\|lcsgib\|lcsgih\|lctit\|nech\|neck\|unics) true;;
958	(*) printf "\n"
959	printf "\n +++ sorry: execution of batch jobs on remote host \"$host\""
960	printf "\n is not available"
961	locat=nqs; (( iec = 0 )); exit;;
962	esac
963	else
964	host=$localhost
965	fi
966
967
968	# PRUEFUNG EINIGER PROZESSORZAHLANGABEN BEI RECHNUNGEN AUF PARALLELRECHNERN
969	if [[ "$cond1" = parallel \|\| "$cond2" = parallel ]]
970	then
971
972	# PRUEFEN, OB DIE ANZAHL DER ZU VERWENDENDEN PES ANGEGEBEN WURDE
973	if [[ ! -n $numprocs ]]
974	then
975	printf "\n"
976	printf "\n +++ option \"-K parallel\" requires additional specification"
977	printf "\n of the number of processors to be used by"
978	printf "\n mrun-option \"-X\" or by environment-variable"
979	printf "\n \"numprocs\" in the configuration file"
980	locat=numprocs; (( iec = 0 )); exit
981	fi
982
983	# PRUEFEN, OB DIE PROZESSORANZAHL PRO KNOTEN ANGEGEBEN WURDE (GGF.
984	# DEFAULT-WERT SETZEN) UND OB SIE EIN GANZZAHLIGER TEILER DER
985	# GESAMTPROZESSORANZAHL IST
986	if [[ $host = nech \|\| $host = neck \|\| $host = ibmh \|\| $host = ibmb \|\| $host = ibms ]]
987	then
988	[[ "$tasks_per_node" = "" ]] && tasks_per_node=6
989	(( ival = $tasks_per_node ))
990	(( pes = numprocs ))
991	# if [[ $(echo $package_list \| grep -c dvrp_graphics+1PE) = 1 ]]
992	# then
993	# (( pes = pes - 1 ))
994	# fi
995	(( ii = pes / ival ))
996	if (( pes - ii * ival > 0 ))
997	then
998	printf "\n"
999	printf "\n +++ tasks per node (option \"-T\") must be an integral"
1000	printf "\n divisor of the total number of processors (option \"-X\")"
1001	printf "\n values of this mrun-call: \"-T $tasks_per_node\" \"-X $numprocs\""
1002	locat=tasks_per_node; (( iec = 0 )); exit
1003	fi
1004	fi
1005
1006	# IBMY HAT NUR EINEN KNOTEN
1007	if [[ $host = ibmy ]]
1008	then
1009	if [[ "$tasks_per_node" != "" && "$tasks_per_node" != "$numprocs" ]]
1010	then
1011	printf "\n"
1012	printf "\n +++ on ibmy, tasks per node (option \"-T\") must be equal to the"
1013	printf "\n total number of processors (option \"-X\")"
1014	printf "\n values of this mrun-call: \"-T $tasks_per_node\" \"-X $numprocs\""
1015	locat=tasks_per_node; (( iec = 0 )); exit
1016	fi
1017	fi
1018
1019	# FALLS OPENMP PARALLELISIERUNG VERWENDET WERDEN SOLL, ANZAHL VON THREADS
1020	# SETZEN UND ZAHL DER TASKS PRO KNOTEN AUF 1 SETZEN
1021	if [[ $use_openmp = true ]]
1022	then
1023	threads_per_task=$tasks_per_node
1024	tasks_per_node=1
1025	fi
1026	OOPT="-O $threads_per_task"
1027	TOPT="-T $tasks_per_node"
1028
1029	# GESAMTZAHL DER KNOTEN BESTIMMEN
1030	if [[ "$tasks_per_node" != "" ]]
1031	then
1032	(( nodes = numprocs / ( tasks_per_node * threads_per_task ) ))
1033	fi
1034
1035	# PRUEFEN, OB NODE USAGE EINEN ERLAUBTEN WERT HAT BZW. DEN DEFAULT
1036	# SETZEN
1037	if [[ $node_usage = default ]]
1038	then
1039	if [[ $host = ibms ]]
1040	then
1041	node_usage=shared
1042	elif [[ $host = lctit ]]
1043	then
1044	node_usage=sla3
1045	elif [[ $(echo $host \| cut -c1-5) = lcsgi ]]
1046	then
1047	node_usage=singlejob
1048	else
1049	node_usage=not_shared
1050	fi
1051	fi
1052
1053	if [[ $node_usage != shared && $node_usage != not_shared && $node_usage != singlejob && "$(echo $node_usage \| cut -c1-3)" != "sla" && $node_usage != novice ]]
1054	then
1055	printf "\n"
1056	printf "\n +++ node usage (option \"-n\") is only allowed to be set"
1057	printf "\n \"shared\" or \"not_shared\""
1058	locat=tasks_per_node; (( iec = 0 )); exit
1059	fi
1060
1061	fi
1062
1063	# PRUEFEN, OB HOSTFILE EXISTIERT
1064	if [[ -n $hostfile ]]
1065	then
1066	if [[ ! -f $hostfile ]]
1067	then
1068	printf "\n"
1069	printf "\n +++ hostfile \"$hostfile\" does not exist"
1070	locat=hostfile; exit
1071	fi
1072	fi
1073
1074	# PRUEFEN, OB RHOSTS DATEI EXISTIERT. GEGEBENENFALLS ANLEGEN BZW. ERWEITERN
1075	if [[ $host = ibmy && $do_remote = false ]]
1076	then
1077	if [[ ! -f $HOME/.rhosts ]]
1078	then
1079	echo "gfdl5.yonsei.ac.kr" > $HOME/.rhosts
1080	printf "\n\n *** file:"
1081	printf "\n $HOME/.rhosts"
1082	printf "\n was created\n"
1083	fi
1084	if [[ $(grep -c gfdl5.yonsei.ac.kr $HOME/.rhosts) = 0 ]]
1085	then
1086	echo "gfdl5.yonsei.ac.kr" >> $HOME/.rhosts
1087	printf "\n\n *** file:"
1088	printf "\n $HOME/.rhosts"
1089	printf "\n was extended by the name of the current host\n"
1090	fi
1091	fi
1092
1093
1094
1095	# FALLS NICHT VORGEGEBEN, DEFAULT-QUEUE AUF DER ZIELMASCHINE FESTLEGEN
1096	if [[ $queue = none ]]
1097	then
1098	case $host in
1099	(ibmb) if [[ $node_usage = shared ]]
1100	then
1101	queue=cshare
1102	else
1103	queue=csolo
1104	fi;;
1105	(ibmh) if [[ $node_usage = shared ]]
1106	then
1107	queue=cshare
1108	else
1109	queue=csolo
1110	fi;;
1111	(ibmy) queue=parallel;;
1112	(lctit) queue=sla3;;
1113	(nech) queue=none;;
1114	(neck) queue=P;;
1115	(unics) queue=unics;;
1116	esac
1117	fi
1118
1119
1120	# VOLLSTAENDIGE DATEINAMEN DER INPUT-FILES BILDEN,
1121	# INPUT-DATEIEN AUF VORHANDENSEIN PRUEFEN UND EVTL. HOECHSTE ZYKLUSNUMMER
1122	# ERMITTELN
1123	(( i = 0 ))
1124	while (( i < iin ))
1125	do
1126	(( i = i + 1 ))
1127	(( maxcycle = 0 ))
1128
1129	# NAMENSBILDUNG (EVTL. IST FESTER DATEINAME VORGEGEBEN)
1130	if [[ "${actionin[$i]}" = di ]]
1131	then
1132	remotepathin[$i]=${pathin[$i]}/${endin[$i]} # REMOTE-PFAD ERST AUF
1133	# REM-MASCHINE AUSWERTEN
1134	eval filename=${pathin[$i]}/${endin[$i]}
1135	else
1136	remotepathin[$i]=${pathin[$i]}/${afname}${endin[$i]} # REMOTE-PFAD ERST AUF
1137	# REM-MASCHINE AUSWERTEN
1138	eval filename=${pathin[$i]}/${afname}${endin[$i]}
1139	fi
1140
1141	# PRUEFEN AUF VORHANDENSEIN
1142	if [[ $(ls $filename* 2>&1 \| grep -c "not found") = 1 \|\| \
1143	$(ls $filename* 2>&1 \| grep -c "No such file") = 1 \|\| \
1144	$(ls $filename* 2>&1 \| grep -c "does not exist") = 1 ]]
1145	then
1146	# DATEIEN MIT EXTENSION (Z.B. NC) MUESSEN NICHT ZWINGEND VORHANDEN
1147	# SEIN, DESHALB IN SOLCHEN FAELLEN KEIN ABBRUCH. DIES IST NUR EINE
1148	# VORUEBERGEHENDE LOESUNG (OKT 05). NICHT ZWINGEND BENOETIGTE
1149	# EINGABEDATEIEN SOLLTEN EINE SPEZIELLE OPTION IN DER DATEI-
1150	# VERBINDUNGSANWEISUNG BEKOMMEN (Z.B. inopt?)
1151	if [[ "${transin[$i]}" != "locopt" ]]
1152	then
1153	printf "\n\n +++ INPUT-file: "
1154	if [[ "${extin[$i]}" = "" ]]
1155	then
1156	printf "\n $filename"
1157	else
1158	printf "\n $filename.${extin[$i]}"
1159	fi
1160	printf "\n does not exist\n"
1161	locat=input; exit
1162	else
1163	transin[$i]="unavailable"
1164	fi
1165	else
1166
1167	# ZYKLUSNUMMER FESTSTELLEN
1168	ls -1 -d $filename > filelist 2>/dev/null
1169	ls -1 -d $filename.* >> filelist 2>/dev/null
1170	while read zeile
1171	do
1172	cycle=$(print $zeile \| cut -f2 -d".")
1173	if [[ "$cycle" = "$zeile" ]]
1174	then
1175	(( icycle = 0 ))
1176	elif [[ "$cycle" = "${extin[$i]}" ]]
1177	then
1178	(( icycle = 0 ))
1179	else
1180	(( icycle = $cycle ))
1181	fi
1182	if (( icycle > maxcycle ))
1183	then
1184	(( maxcycle = icycle ))
1185	file_to_be_used=$zeile
1186	fi
1187	done <filelist
1188	rm filelist
1189
1190	# EVTL. ZYKLUSNUMMER AN DATEINAMEN ANFUEGEN
1191	if (( maxcycle > 0 ))
1192	then
1193	if [[ "${extin[$i]}" != " " && "${extin[$i]}" != "" ]]
1194	then
1195	filename=${filename}.$maxcycle.${extin[$i]}
1196	else
1197	filename=${filename}.$maxcycle
1198	fi
1199	else
1200	if [[ "${extin[$i]}" != " " && "${extin[$i]}" != "" ]]
1201	then
1202	filename=${filename}.${extin[$i]}
1203	fi
1204	fi
1205
1206	# DATEINAMEN OHNE PFAD ABER MIT ZYKLUSNUMMER ABSPEICHERN,
1207	# DA SPAETER BEI RUECKSPEICHERN VOM ARCHIVSYSTEM EVTL. BENOETIGT
1208	absnamein[$i]=$filename
1209	if (( maxcycle > 0 ))
1210	then
1211	if [[ "${actionin[$i]}" = di ]]
1212	then
1213	frelin[$i]=${endin[$i]}.$maxcycle
1214	else
1215	frelin[$i]=${afname}${endin[$i]}.$maxcycle
1216	fi
1217	else
1218	if [[ "${actionin[$i]}" = di ]]
1219	then
1220	frelin[$i]=${endin[$i]}
1221	else
1222	frelin[$i]=${afname}${endin[$i]}
1223	fi
1224	fi
1225
1226	fi
1227	done
1228
1229
1230	# VOLLSTAENDIGE DATEINAMEN (OHNE $ ODER ~) DER OUTPUT-FILES BILDEN,
1231	# OUTPUT-DATEIEN AUF VORHANDENSEIN PRUEFEN UND EVTL. HOECHSTE ZYKLUSNUMMER
1232	# ERMITTELN ODER, FALLS NICHT VORHANDEN, PRUEFEN, OB SIE SICH ANLEGEN LASSEN
1233	# DIESE AKTIONEN FINDEN NICHT STATT, WENN PROGRAMM AUF REMOTE-MASCHINE
1234	# RECHNET UND DATEI ANSCHLIESSEND TRANSFERIERT WERDEN SOLL!
1235	(( i = 0 ))
1236	while (( i < iout ))
1237	do
1238	(( i = i + 1 ))
1239	if [[ ! ( $fromhost != $localhost && ( "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = tra \|\| "${actionout[$i]}" = trpe ) ) ]]
1240	then
1241	if [[ "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = trpe ]]
1242	then
1243	actionout[$i]=""
1244	elif [[ "${actionout[$i]}" = tra ]]
1245	then
1246	actionout[$i]=a
1247	fi
1248	(( maxcycle = 0 ))
1249	eval filename=${pathout[$i]}/${fname}${endout[$i]}
1250	eval catalogname=${pathout[$i]}
1251	if [[ $(ls $filename* 2>&1 \| grep -c "not found") = 1 \|\| \
1252	$(ls $filename* 2>&1 \| grep -c "No such file") = 1 \|\| \
1253	$(ls $filename* 2>&1 \| grep -c "does not exist") = 1 ]]
1254	then
1255
1256	# OUTPUT-DATEI NICHT VORHANDEN. PRUEFEN, OB ANLEGEN MOEGLICH.
1257	if cat /dev/null > $filename
1258	then
1259	rm $filename
1260	else
1261
1262	# PRUEFEN, OB KATALOG VORHANDEN UND EVTL. DIESEN ANLEGEN
1263	if [[ ! -d $catalogname ]]
1264	then
1265	if mkdir -p $catalogname
1266	then
1267	printf "\n\n *** directory:"
1268	printf "\n $catalogname"
1269	printf "\n was created\n"
1270	else
1271	printf "\n\n +++ OUTPUT-file:"
1272	printf "\n $filename"
1273	printf "\n cannot be created, because directory does not exist"
1274	printf "\n and cannot be created either"
1275	printf "\n"
1276	locat=output ; exit
1277	fi 2>/dev/null
1278	else
1279	printf "\n\n +++ OUTPUT-file:"
1280	printf "\n $filename"
1281	printf "\n cannot be created, although directory exists"
1282	printf "\n"
1283	locat=output ; exit
1284	fi
1285	fi 2>/dev/null
1286	else
1287
1288	# ZYKLUSNUMMER FESTSTELLEN
1289	ls -1 -d $filename > filelist 2>/dev/null
1290	ls -1 -d $filename.* >> filelist 2>/dev/null
1291	while read zeile
1292	do
1293	cycle=$(print $zeile \| cut -f2 -d".")
1294	if [[ "$cycle" = "$zeile" \|\| "$cycle" = ${extout[$i]} ]]
1295	then
1296	(( icycle = 1 ))
1297	else
1298	(( icycle = $cycle + 1 ))
1299	fi
1300	if (( icycle > maxcycle ))
1301	then
1302	(( maxcycle = icycle ))
1303	fi
1304	done <filelist
1305	rm filelist
1306	fi
1307
1308	# EVTL. ZYKLUSNUMMER AN DATEINAMEN ANFUEGEN UND PRUEFEN, OB SICH
1309	# DATEI AUCH WIRKLICH ANLEGEN LAESST. IM APPEND-FALL MUSS AN DEN
1310	# HOECHSTEN VORHANDENEN ZYKLUS-ANGEHAENGT WERDEN. ANLAGEPRUEFUNG
1311	# IST DANN NATUERLICH NICHT ZULAESSIG BZW. MOEGLICH
1312	if [[ "${actionout[$i]}" != a ]]
1313	then
1314	if (( maxcycle > 0 ))
1315	then
1316	filename=${filename}.$maxcycle
1317	if cat /dev/null > $filename
1318	then
1319	rm $filename
1320	else
1321	printf "\n +++ OUTPUT-file:"
1322	printf "\n $filename"
1323	printf "\n cannot be created"
1324	locat=output ; exit
1325	fi
1326	fi
1327	else
1328	(( maxcycle = maxcycle - 1 ))
1329	if (( maxcycle > 0 ))
1330	then
1331	filename=${filename}.$maxcycle
1332	fi
1333	fi
1334
1335	# DATEINAMEN OHNE PFAD ABER MIT ZYKLUSNUMMER ABSPEICHERN,
1336	# DA SPAETER BEI ABLAGE AUF ARCHIVSYSTEM BZW. FUER
1337	# DATEI OUTPUT_FILE_CONNECTIONS EVTL. BENOETIGT
1338	pathout[$i]=$filename
1339	if (( maxcycle > 0 ))
1340	then
1341	frelout[$i]=${fname}${endout[$i]}.$maxcycle
1342	else
1343	frelout[$i]=${fname}${endout[$i]}
1344	fi
1345
1346	fi
1347	done
1348
1349
1350	# DAS DVRP-PAKET ERFORDERT EINE ENTSPRECHENDE BIBLIOTHEK
1351	if [[ $(echo $package_list \| grep -c dvrp_graphics) != 0 ]]
1352	then
1353	if [[ "$dvrp_inc" = "" ]]
1354	then
1355	printf "\n\n +++ no value for \"dvrp_inc\" given in configuration file"
1356	printf "\n This is required for the dvrp_graphics package.\n"
1357	locat=dvrp; exit
1358	fi
1359	if [[ "$dvrp_lib" = "" ]]
1360	then
1361	printf "\n\n +++ no value for \"dvrp_lib\" given in configuration file"
1362	printf "\n This is required for the dvrp_graphics package.\n"
1363	locat=dvrp; exit
1364	fi
1365	fi
1366
1367
1368	# PRUEFEN, OB ENTWEDER HAUPTPROGRAMM ODER NUR EIN AUSFUEHRBARES
1369	# PROGRAMM VEREINBART WURDE (IN DIESEM FALL BRAUCHT IM WEITEREN NICHT
1370	# UEBERSETZT ZU WERDEN)
1371	if [[ "$mainprog" = "" && "$executable" = "" ]]
1372	then
1373	printf "\n +++ neither main program nor executable defined"
1374	locat=source; exit
1375	elif [[ "$mainprog" != "" && "$executable" != "" ]]
1376	then
1377	printf "\n +++ main program as well as executable defined"
1378	locat=source; exit
1379	elif [[ "$mainprog" = "" && "$executable" != "" ]]
1380	then
1381	do_compile=false
1382	fi
1383
1384
1385	# ALLE ZU UEBERSETZENDEN PROGRAMMTEILE ZUSAMMENSAMMELN
1386	# BEI BATCH-JOBS IST DIES NICHT NOETIG, WEIL DIE PROGRAMMTEILE BEREITS DURCH
1387	# DEN MRUN-AUFRUF ERMITTELT SIND, DER DEN BATCH-JOB GENERIERT HAT, UND
1388	# IM VERZEICHNIS SOURCES_FOR_RUN_... ABGELEGT SIND
1389	if [[ $do_compile = true && "$SOURCES_COMPLETE" = "" ]]
1390	then
1391
1392	[[ "$source_list" = LM ]] && source_list=LOCALLY_MODIFIED
1393	[[ "$source_list" = WP ]] && source_list=WRITE_PERMIT
1394
1395	if [[ $restart_run != true ]]
1396	then
1397	rm -rf SOURCES_FOR_RUN_$fname
1398	mkdir SOURCES_FOR_RUN_$fname
1399	fi
1400
1401
1402	# EVTL. ZU UEBERSETZENDE PROGRAMMTEILE DADURCH BESTIMMEN, DASS GEPRUEFT
1403	# WIRD, WELCHE DATEIEN WRITE-PERMIT BESITZEN (DATEIEN SOLLTEN DESHALB
1404	# UNTER RCS-KONTROLLE STEHEN). MIT DER VARIABLEN EXCLUDE KOENNEN
1405	# BESTIMMTE DATEIEN GRUNDSAETZLICH VON DER UEBERSETZUNG AUSGESCHLOSSEN
1406	# WERDEN. DIES IST NUR BEI MANUELLEM START VON MRUN DURCH DEN BENUTZER
1407	# MOEGLICH, DA BEI AUTOMATISCHEN RESTARTS TEST DURCH DIE TATSAECHLICH
1408	# ZU UBERSETZENDEN DATEIEN ERSETZT IST.
1409	# ALLE ERMITTELTEN DATEIEN WERDEN IM VERZEICHNIS SOURCES_FOR_RUN_...
1410	# GESAMMELT
1411	if [[ "$source_list" = WRITE_PERMIT ]]
1412	then
1413
1414	source_list=""
1415	cd $source_path
1416
1417
1418	# ALLE MOEGLICHEN QUELLCODEDATEIEN AUFLISTEN
1419	Names=$(ls -1 *.f90 2>&1)
1420	[[ $(echo $Names \| grep -c '*.f90') = 0 ]] && Filenames="$Names"
1421	Names=$(ls -1 *.F90 2>&1)
1422	[[ $(echo $Names \| grep -c '*.F90') = 0 ]] && Filenames="$Filenames $Names"
1423	Names=$(ls -1 *.F 2>&1)
1424	[[ $(echo $Names \| grep -c '*.F') = 0 ]] && Filenames="$Filenames $Names"
1425	Names=$(ls -1 *.f 2>&1)
1426	[[ $(echo $Names \| grep -c '*.f') = 0 ]] && Filenames="$Filenames $Names"
1427	Names=$(ls -1 *.c 2>&1)
1428	[[ $(echo $Names \| grep -c '*.c') = 0 ]] && Filenames="$Filenames $Names"
1429
1430
1431	# DATEIEN MIT WRITE-PERMIT NACH SOURCES_FOR_RUN_... KOPIEREN
1432	for dateiname in $Filenames
1433	do
1434	if [[ -w $dateiname ]]
1435	then
1436	if [[ "$exclude" = "" \|\| $(echo $exclude \| grep -c $dateiname) = 0 ]]
1437	then
1438	cp $dateiname $working_directory/SOURCES_FOR_RUN_$fname
1439	source_list=$source_list"$dateiname "
1440	fi
1441	fi
1442	done
1443
1444	cd - > /dev/null
1445
1446
1447	elif [[ "$source_list" = LOCALLY_MODIFIED ]]
1448	then
1449
1450	# MODIFIZIERTE DATEIEN DER SVN-ARBEITSKOPIE BESTIMMEN
1451	source_list=""
1452	cd $source_path
1453
1454
1455	# PRUEFEN, OB VERZEICHNIS UEBERHAUPT UNTER SVN-KONTROLLE STEHT
1456	if [[ ! -d .svn ]]
1457	then
1458	printf "\n\n +++ source directory"
1459	printf "\n \"$source_path\" "
1460	printf "\n is not under control of \"subversion\"."
1461	printf "\n Please do not use mrun-option \"-s LOCALLY MODIFIED\"\n"
1462	fi
1463
1464
1465	# ALLE MODIFIZIERTEN QUELLCODEDATEIEN AUFLISTEN
1466	Filenames=""
1467	svn status > tmp_mrun
1468	while read line
1469	do
1470	firstc=`echo $line \| cut -c1`
1471	if [[ $firstc = M \|\| $firstc = "?" ]]
1472	then
1473	Name=`echo "$line" \| cut -c8-`
1474	extension=`echo $Name \| cut -d. -f2`
1475	if [[ "$extension" = f90 \|\| "$extension" = F90 \|\| "$extension" = f \|\| "$extension" = F \|\| "$extension" = c ]]
1476	then
1477	Filenames="$Filenames "$Name
1478	fi
1479	fi
1480	done < tmp_mrun
1481
1482
1483	# DATEIEN NACH SOURCES_FOR_RUN_... KOPIEREN
1484	for dateiname in $Filenames
1485	do
1486	cp $dateiname $working_directory/SOURCES_FOR_RUN_$fname
1487	source_list=$source_list"$dateiname "
1488	done
1489
1490	cd - > /dev/null
1491
1492
1493	# MITTELS OPTION -s ANGEGEBENE DATEIEN NACH SOURCES_FOR_RUN_... KOPIEREN
1494	# BEI AUTOMATISCHEN FORTSETZUNGSLAEUFEN SIND DORT SCHON ALLE DATEIEN
1495	# VORHANDEN
1496	elif [[ "$source_list" != "" && $restart_run != true ]]
1497	then
1498
1499	cd $source_path
1500
1501	for filename in $source_list
1502	do
1503
1504	# QUELLTEXT-DATEI DARF KEINE PFADE BEINHALTEN
1505	if [[ $(print $filename \| grep -c "/") != 0 ]]
1506	then
1507	printf "\n +++ source code file: $filename"
1508	printf "\n must not contain (\"/\") "
1509	locat=source; exit
1510	fi
1511
1512	if [[ ! -f $filename ]]
1513	then
1514	printf "\n +++ source code file: $filename"
1515	printf "\n does not exist"
1516	locat=source; exit
1517	else
1518	cp $filename $working_directory/SOURCES_FOR_RUN_$fname
1519	fi
1520
1521	done
1522
1523	cd - > /dev/null
1524
1525	fi
1526
1527
1528	# PRUEFEN, OB ENTWEDER HAUPTPROGRAMM VORHANDEN UND ES EVTL. IN DER
1529	# LISTE DER ZU UEBERSETZENDEN PROGRAMMTEILE MIT ENTHALTEN IST (WENN
1530	# NICHT, WIRD ES DIESER LISTE HINZUGEFUEGT)
1531	if [[ $restart_run != true ]]
1532	then
1533
1534	if [[ ! -f "$source_path/$mainprog" ]]
1535	then
1536	printf "\n\n +++ main program: $mainprog"
1537	printf "\n does not exist in source directory"
1538	printf "\n \"$source_path\"\n"
1539	locat=source; exit
1540	else
1541	if [[ $(echo $source_list \| grep -c $mainprog) = 0 ]]
1542	then
1543	cp $source_path/$mainprog SOURCES_FOR_RUN_$fname
1544	source_list=${mainprog}" $source_list"
1545	fi
1546	fi
1547	fi
1548
1549
1550	# DATEIEN AUS ZUSAETZLICHEM QUELLVERZEICHNIS HINZUFUEGEN
1551	if [[ $restart_run != true && "$add_source_path" != "" ]]
1552	then
1553
1554	# GIBT ES DAS VERZEICHNIS UEBERHAUPT?
1555	if [[ ! -d $add_source_path ]]
1556	then
1557	printf "\n\n +++ WARNING: additional source code directory"
1558	printf "\n \"$add_source_path\" "
1559	printf "\n does not exist or is not a directory."
1560	printf "\n No source code will be used from this directory!\n"
1561	add_source_path=""
1562	sleep 3
1563	else
1564
1565	cd $add_source_path
1566
1567	Names=$(ls -1 *.f90 2>&1)
1568	[[ $(echo $Names \| grep -c '*.f90') = 0 ]] && AddFilenames="$Names"
1569	Names=$(ls -1 *.F90 2>&1)
1570	[[ $(echo $Names \| grep -c '*.F90') = 0 ]] && AddFilenames="$AddFilenames $Names"
1571	Names=$(ls -1 *.F 2>&1)
1572	[[ $(echo $Names \| grep -c '*.F') = 0 ]] && AddFilenames="$AddFilenames $Names"
1573	Names=$(ls -1 *.f 2>&1)
1574	[[ $(echo $Names \| grep -c '*.f') = 0 ]] && AddFilenames="$AddFilenames $Names"
1575	Names=$(ls -1 *.c 2>&1)
1576	[[ $(echo $Names \| grep -c '*.c') = 0 ]] && AddFilenames="$AddFilenames $Names"
1577
1578	cd - > /dev/null
1579	cd SOURCES_FOR_RUN_$fname
1580
1581	for dateiname in $AddFilenames
1582	do
1583	if [[ -f $dateiname ]]
1584	then
1585	printf "\n +++ source code file \"$dateiname\" found in additional"
1586	printf "\n source code directory \"$add_source_path\" "
1587	printf "\n as well as in directory \"$source_path\"."
1588	locat=source; exit
1589	fi
1590
1591	cp $add_source_path/$dateiname .
1592	source_list="$source_list $dateiname"
1593
1594	# Default User-Interface von der Liste entfernen, falls Datei
1595	# ein User-Interface enthaelt
1596	if [[ $( cat $dateiname \| grep -c "END SUBROUTINE user_parin" ) != 0 ]]
1597	then
1598	if [[ $dateiname != user_interface.f90 && -f user_interface.f90 ]]
1599	then
1600	rm -rf user_interface.f90
1601	source_list=`echo $source_list \| sed -e 's/user_interface.f90//'`
1602	printf "\n\n *** default \"user_interface.f90\" removed from the files to be translated"
1603	printf "\n since a user-interface is found in file"
1604	printf "\n \"$add_source_path/$dateiname\" \n"
1605	sleep 3
1606	else
1607	printf "\n\n *** user-interface file \"$dateiname\" "
1608	printf "\n added to the files to be translated \n"
1609	sleep 3
1610	fi
1611	fi
1612	done
1613
1614	cd - > /dev/null
1615	fi
1616	fi
1617
1618
1619	# ALLE UNTERPROGRAMME, DIE ZU VEREINBARTEN SOFTWAREPAKETEN GEHOEREN,
1620	# DER LISTE DER ZU UEBERSETZENDEN DATEIEN HINZUFUEGEN
1621	if [[ $restart_run != true && -n $package_list ]]
1622	then
1623
1624	cd $source_path
1625
1626	for package in $package_list
1627	do
1628
1629	[[ $package = "dvrp_graphics+1PE" ]] && package=dvrp_graphics
1630
1631	# ERMITTELE ALLE DATEIEN, DIE ZUM PAKET GEHOEREN
1632	# FEHLERMELDUNGEN WERDEN ABGEFANGEN, DA * AUCH VERZEICHNISSNAMEN
1633	# LIEFERT
1634	package_source_list=`grep "defined( __$package " * 2>/dev/null \| cut -f1 -d:`
1635
1636
1637	# FUEGE DIESE DATEIEN DER LISTE DER ZU UEBERSETZENDEN DATEIEN
1638	# HINZU, FALLS SIE NOCH NICHT DAZUGEHOEREN
1639	for source_list_name in $package_source_list
1640	do
1641	if [[ $(echo $source_list \| grep -c $source_list_name) = 0 ]]
1642	then
1643
1644	# NUR DATEIEN MIT GUELTIGEN ENDUNGEN VERWENDEN
1645	ending=`echo $source_list_name \| cut -f2 -d.`
1646	if [[ "$ending" = f90 \|\| "$ending" = F90 \|\| "$ending" = f \|\| "$ending" = F \|\| "$ending" = c ]]
1647	then
1648	cp $source_list_name $working_directory/SOURCES_FOR_RUN_$fname
1649	source_list="$source_list $source_list_name"
1650	fi
1651	fi
1652	done
1653	done
1654
1655	cd - > /dev/null
1656	fi
1657
1658
1659	# MAKEFILE AUF VORHANDENSEIN PRUEFEN UND KOPIEREN
1660	# BEI RESTART-LAEUFEN LIEGT ES SCHON IM VERZEICHNIS SOURCES_FOR_RUN...
1661	if [[ "$restart_run" != true ]]
1662	then
1663	[[ "$makefile" = "" ]] && makefile=$source_path/Makefile
1664	if [[ ! -f $makefile ]]
1665	then
1666	printf "\n +++ file \"$makefile\" does not exist"
1667	locat=make; exit
1668	else
1669	cp $makefile SOURCES_FOR_RUN_$fname/Makefile
1670	fi
1671	fi
1672
1673	fi # do_compile=true
1674
1675
1676	# FALLS PROGRAMMTEILE UEBERSETZT WERDEN SOLLEN, FOLGEN JETZT EINIGE
1677	# UEBERPRUEFUNGEN UND DAS SETZEN DER PRAEPROZESSOR-DIREKTIVEN
1678	if [[ $do_compile = true ]]
1679	then
1680
1681	# PRAEPROZESSOR-DIREKTIVEN ZUM SELEKTIVEN AUSWAEHLEN VON CODETEILEN
1682	# ZUSAMMENSETZEN
1683	# DIREKTIVEN ZUM AKTIVIEREN VON RECHNERSPEZIFISCHEM CODE
1684	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1685	then
1686	cpp_options="${cpp_options},-D__ibm=__ibm"
1687	elif [[ $(echo $localhost \| cut -c1-3) = nec ]]
1688	then
1689	cpp_options="$cpp_options -D__nec"
1690	elif [[ $(echo $localhost \| cut -c1-2) = lc ]]
1691	then
1692	cpp_options="$cpp_options -D__lc"
1693	else
1694	cpp_options="$cpp_options -D__$localhost"
1695	fi
1696
1697	# DIREKTIVEN DIE DURCH OPTION -K BESTIMMT WERDEN (Z.B. PARALLEL)
1698	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1699	then
1700	[[ -n $cond1 ]] && cpp_options="${cpp_options},-D__$cond1=__$cond1"
1701	[[ -n $cond2 ]] && cpp_options="${cpp_options},-D__$cond2=__$cond2"
1702	else
1703	[[ -n $cond1 ]] && cpp_options="$cpp_options -D__$cond1"
1704	[[ -n $cond2 ]] && cpp_options="$cpp_options -D__$cond2"
1705	fi
1706
1707	# DIREKTIVEN DIE SOFTWAREPAKETE AKTIVIEREN (OPTION -p)
1708	if [[ -n $package_list ]]
1709	then
1710	for package in $package_list
1711	do
1712	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1713	then
1714	if [[ $package != "dvrp_graphics+1PE" ]]
1715	then
1716	cpp_options="${cpp_options},-D__$package=__$package"
1717	else
1718	cpp_options="${cpp_options},-D__dvrp_graphics=__dvrp_graphics"
1719	export use_seperate_pe_for_dvrp_output=true
1720	fi
1721	else
1722	if [[ $package != "dvrp_graphics+1PE" ]]
1723	then
1724	cpp_options="$cpp_options -D__$package"
1725	else
1726	cpp_options="$cpp_options -D__dvrp_graphics"
1727	export use_seperate_pe_for_dvrp_output=true
1728	fi
1729	fi
1730	done
1731	fi
1732
1733	# DIREKTIVEN DIE DURCH OPTION -D FESTGELEGT SIND
1734	if [[ -n $cpp_opts ]]
1735	then
1736	for popts in $cpp_opts
1737	do
1738	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1739	then
1740	cpp_options="${cpp_options},-D__$popts=__$popts"
1741	else
1742	cpp_options="$cpp_options -D__$popts"
1743	fi
1744	done
1745	fi
1746
1747	else
1748
1749
1750	# BEI LOKALEN RECHNUNGEN PRUEFEN, OB EXECUTABLE VORHANDEN
1751	if [[ $do_remote = false ]]
1752	then
1753	if [[ ! -f $executable ]]
1754	then
1755	printf "\n +++ executable file: $executable"
1756	printf "\n does not exist"
1757	locat=executable; exit
1758	fi
1759	fi
1760	fi
1761
1762
1763	# JOBMODUS FESTSTELLEN
1764	if [[ "$ENVIRONMENT" = BATCH && $localhost != lctit \|\| "$QUEUE" != interactive && $localhost = lctit ]]
1765	then
1766	jobmo=BATCH
1767	else
1768	jobmo=INTERACTIVE
1769	fi
1770
1771
1772	# HOSTSPEZIFISCHE DEFAULT-COMPILER SETZEN, FALLS NICHT BEREITS
1773	# DURCH BENUTZER ANDERWEITIG VEREINBART
1774	if [[ "$compiler_name" = "" ]]
1775	then
1776
1777	printf "\n +++ no compiler specified for \"$localhost $cond1 $cond2\""
1778	locat=compiler_name; exit
1779
1780	fi
1781
1782
1783	# COMPILER AUF NECK UEBERSCHREIBEN
1784	[[ $localhost = neck ]] && compiler_name=mpif90
1785
1786
1787
1788	# TEMPORAEREN KATALOGNAMEN BESTIMMEN
1789	kennung=$RANDOM
1790	if [[ "$tmp_user_catalog" = "" ]]
1791	then
1792	if [[ $localhost = ibmb \|\| $localhost = ibmh ]]
1793	then
1794	tmp_user_catalog=$TMPDIR
1795	elif [[ $localhost = nech ]]
1796	then
1797	tmp_user_catalog=$WRKSHR
1798	else
1799	tmp_user_catalog=/tmp
1800	fi
1801	fi
1802	TEMPDIR=$tmp_user_catalog/${usern}.$kennung
1803
1804
1805	# KATALOGNAMEN FUER ZWISCHENSPEICHERUNG VON FORTSETZUNGSLAUFDATEIEN
1806	# BESTIMMEN
1807	if [[ "$tmp_data_catalog" = "" ]]
1808	then
1809	if [[ $localhost = ibmb \|\| $localhost = ibmh ]]
1810	then
1811	tmp_data_catalog=$WORK/mrun_restart_data
1812	elif [[ $localhost = nech ]]
1813	then
1814	tmp_data_catalog=$WRKSHR/mrun_restart_data
1815	else
1816	tmp_data_catalog=/tmp/mrun_restart_data
1817	fi
1818	fi
1819
1820
1821	# EVENTUELL BEI LOKALEN RECHNUNGEN $-ZEICHEN IN ENVIRONMENT-VARIABLEN
1822	# ERSETZEN
1823	if [[ $do_remote = false && $do_compile = true ]]
1824	then
1825	eval fopts=\"$fopts\"
1826	eval lopts=\"$lopts\"
1827	fi
1828
1829
1830
1831	# COMPILE- UND LINK-OPTIONEN BESTIMMEN
1832	fopts="$fopts $netcdf_inc $dvrp_inc"
1833	lopts="$lopts $netcdf_lib $dvrp_lib"
1834	ROPTS="$ropts"
1835	if [[ ( $(echo $host \| cut -c1-3) = nec \|\| $(echo $host \| cut -c1-3) = ibm \|\| $host = lcsgih \|\| $host = lcsgib \|\| $host = lctit \|\| $host = lcfimm \|\| $host = lcxt4 ) && -n $numprocs ]]
1836	then
1837	XOPT="-X $numprocs"
1838	fi
1839
1840
1841
1842	# PRUEFEN DER CPU-ZEIT. (CPUMAX WIRD ALS ENV-VARIABLE VOM HAUTPRO-
1843	# GRAMM BENOETIGT
1844	done=false
1845	while [[ $done = false ]]
1846	do
1847	cputime=$cpumax
1848	if (( $cputime == 0 ))
1849	then
1850	printf "\n +++ cpu-time is undefined"
1851	printf "\n >>> Please type CPU-time in seconds as INTEGER:"
1852	printf "\n >>> "
1853	read cputime 1>/dev/null 2>&1
1854	else
1855	done=true
1856	fi
1857	cpumax=$cputime
1858	done
1859
1860	(( minuten = cputime / 60 ))
1861	(( sekunden = cputime - minuten * 60 ))
1862
1863
1864	# PRUEFEN DER KERNSPEICHERANFORDERUNG
1865	if [[ $do_batch = true ]]
1866	then
1867	done=false
1868	while [[ $done = false ]]
1869	do
1870	if (( memory == 0 ))
1871	then
1872	printf "\n +++ memory demand is undefined"
1873	printf "\n >>> Please type memory in MByte per process as INTEGER:"
1874	printf "\n >>> "
1875	read memory 1>/dev/null 2>&1
1876	else
1877	done=true
1878	fi
1879	done
1880	fi
1881
1882
1883	# PRUEFEN, OB FUER REMOTE-RECHNUNGEN EIN BENUTZERNAME ANGEGEBEN WURDE
1884	if [[ $do_remote = true && -z $remote_username ]]
1885	then
1886	while [[ -z $remote_username ]]
1887	do
1888	printf "\n +++ username on remote host \"$host\" is undefined"
1889	printf "\n >>> Please type username:"
1890	printf "\n >>> "
1891	read remote_username
1892	done
1893	mc="$mc -u$remote_username"
1894	fi
1895
1896	###########################################################################
1897	# HEADER-AUSGABE
1898	###########################################################################
1899
1900
1901	calltime=$(date)
1902	printf "\n"
1903	# [[ $silent = false ]] && clear
1904	printf "#--------------------------------------------------------------# \n"
1905	printf "\| $version$calltime \| \n"
1906	printf "\| \| \n"
1907	spalte1="called on:"; spalte2=$localhost_realname
1908	printf "\| $spalte1$spalte2 \| \n"
1909	if [[ $local_compile = false ]]
1910	then
1911	if [[ $do_remote = true ]]
1912	then
1913	spalte1="execution on:"; spalte2="$host (username: $remote_username)"
1914	else
1915	spalte1="execution on:"; spalte2="$host ($localhost_realname)"
1916	fi
1917	else
1918	spalte1="compiling test only!"; spalte2=""
1919	fi
1920	printf "\| $spalte1$spalte2 \| \n"
1921	if [[ -n $numprocs ]]
1922	then
1923	spalte1="number of PEs:"; spalte2=$numprocs
1924	printf "\| $spalte1$spalte2 \| \n"
1925	fi
1926	if [[ -n $tasks_per_node ]]
1927	then
1928	spalte1="tasks per node:"; spalte2="$tasks_per_node (number of nodes: $nodes)"
1929	printf "\| $spalte1$spalte2 \| \n"
1930	fi
1931	if [[ $threads_per_task != 1 ]]
1932	then
1933	spalte1="threads per task:"; spalte2="$threads_per_task"
1934	printf "\| $spalte1$spalte2 \| \n"
1935	fi
1936	printf "\| \| \n"
1937	if [[ $do_compile = true ]]
1938	then
1939	spalte1=cpp-directives:; spalte2=$cpp_options
1940	printf "\| $spalte1$spalte2 \| \n"
1941	zeile=$(echo "$cpp_options" \| cut -c41-)
1942	while [[ "$zeile" != "" ]]
1943	do
1944	spalte1=""
1945	spalte2=$zeile
1946	printf "\| $spalte1$spalte2 \| \n"
1947	zeile=$(echo "$zeile" \| cut -c41-)
1948	done
1949
1950	spalte1=compiler-options:; spalte2="$fopts"
1951	printf "\| $spalte1$spalte2 \| \n"
1952	zeile=$(echo "$fopts" \| cut -c41-)
1953	while [[ "$zeile" != "" ]]
1954	do
1955	spalte1=""
1956	spalte2=$zeile
1957	printf "\| $spalte1$spalte2 \| \n"
1958	zeile=$(echo "$zeile" \| cut -c41-)
1959	done
1960
1961	spalte1=linker-options:; spalte2=$lopts
1962	printf "\| $spalte1$spalte2 \| \n"
1963	zeile=$(echo "$lopts" \| cut -c41-)
1964	while [[ "$zeile" != "" ]]
1965	do
1966	spalte1=""
1967	spalte2=$zeile
1968	printf "\| $spalte1$spalte2 \| \n"
1969	zeile=$(echo "$zeile" \| cut -c41-)
1970	done
1971
1972	spalte1="main program":; spalte2=$mainprog
1973	printf "\| $spalte1$spalte2 \| \n"
1974	else
1975	spalte1=executable:; spalte2=$executable
1976	printf "\| $spalte1$spalte2 \| \n"
1977	fi
1978	printf "\| \| \n"
1979	spalte1="base name of files":; spalte2=$fname
1980	printf "\| $spalte1$spalte2 \| \n"
1981	if [[ $fname != $afname ]]
1982	then
1983	spalte1="base name of input files":; spalte2=$afname
1984	printf "\| $spalte1$spalte2 \| \n"
1985	fi
1986	spalte1="INPUT control list":; spalte2=$input_list
1987	printf "\| $spalte1$spalte2 \| \n"
1988	spalte1="OUTPUT control list":; spalte2=$output_list
1989	printf "\| $spalte1$spalte2 \| \n"
1990
1991	if [[ $do_batch = true \|\| "$LOADLBATCH" = yes ]]
1992	then
1993	spalte1="memory demand / PE":; spalte2="$memory MB"
1994	printf "\| $spalte1$spalte2 \| \n"
1995	spalte1=CPU-time:; spalte2="$minuten:$sekunden"
1996	printf "\| $spalte1$spalte2 \| \n"
1997	fi
1998
1999	if [[ $do_compile = true ]]
2000	then
2001	printf "\| \| \n"
2002	printf "\| Files to be compiled: \| \n"
2003	zeile=$source_list
2004	while [[ "$zeile" != "" ]]
2005	do
2006	spalte3=$zeile
2007	printf "\| $spalte3 \| \n"
2008	zeile=$(echo "$zeile" \| cut -c61-)
2009	done
2010	fi
2011	printf "#--------------------------------------------------------------#"
2012
2013
2014
2015	# BEDINGTE AUSGABE DER DATEIVERBINDUNGEN
2016	if [[ $do_trace = true ]]
2017	then
2018	(( i = 0 ))
2019	while (( i < iin ))
2020	do
2021	(( i = i + 1 ))
2022	if (( i == 1 ))
2023	then
2024	printf "\n\n >>> INPUT-file assignments:\n"
2025	fi
2026	printf "\n ${localin[$i]} : ${absnamein[$i]}"
2027	done
2028	(( i = 0 ))
2029	while (( i < iout ))
2030	do
2031	(( i = i + 1 ))
2032	if (( i == 1 ))
2033	then
2034	printf "\n\n >>> OUTPUT-file assignments:\n"
2035	fi
2036	printf "\n ${localout[$i]} : ${pathout[$i]}"
2037	done
2038	(( i = 0 ))
2039	while (( i < iic ))
2040	do
2041	(( i = i + 1 ))
2042	if (( i == 1 ))
2043	then
2044	printf "\n\n >>> INPUT-commands:\n"
2045	fi
2046	printf "\n ${in_command[$i]}"
2047	done
2048	(( i = 0 ))
2049	while (( i < ioc ))
2050	do
2051	(( i = i + 1 ))
2052	if (( i == 1 ))
2053	then
2054	printf "\n\n >>> OUTPUT-commands:\n"
2055	fi
2056	printf "\n ${out_command[$i]}"
2057	done
2058	fi
2059
2060
2061	# ABFRAGEN BEI AUFRUF AUF LOKALER MASCHINE
2062	if [[ $remotecall = false && $silent = false && $jobmo != BATCH ]]
2063	then
2064	antwort=dummy
2065	printf "\n\n"
2066	while [[ "$antwort" != y && "$antwort" != Y && "$antwort" != n && "$antwort" != N ]]
2067	do
2068	printf " >>> everything o.k. (y/n) ? "
2069	read antwort
2070	done
2071	if [[ $antwort = n \|\| $antwort = N ]]
2072	then
2073	locat=user_abort; (( iec = 0 )); exit
2074	fi
2075	if [[ $do_batch = true ]]
2076	then
2077	printf " >>> batch-job will be created and submitted"
2078	else
2079	if [[ $local_compile = false ]]
2080	then
2081	printf " >>> MRUN will now continue to execute on this machine"
2082	else
2083	printf " >>> a test compilation will now be carried out on this machine"
2084	fi
2085	fi
2086	fi
2087
2088
2089
2090
2091	# FALLS AUF DIESER MASCHINE GERECHNET WERDEN SOLL, WERDEN JETZT ENTSPRE-
2092	# CHENDE AKTIONEN DURCHGEFUEHRT
2093	if [[ $do_batch = false ]]
2094	then
2095
2096
2097	# TEMPORAEREN KATALOG ERZEUGEN
2098	mkdir -p $TEMPDIR
2099	chmod go+rx $TEMPDIR
2100	tmpcreate=true
2101
2102
2103	# SAEMTLICHE QUELLTEXT-DATEIEN BZW. AUSFUEHRBARES PROGRAMM IN
2104	# TEMPORAERES VERZEICHNIS KOPIEREN
2105	if [[ $do_compile = true ]]
2106	then
2107
2108	# ON NEC, COMPILATION IS DONE ON HOST CROSS VIA CROSS COMPILING
2109	# CREATE A TEMPORARY DIRECTORY ON THAT MACHINE (HOME MOUNTED VIA NFS)
2110	if [[ $localhost = nech ]]
2111	then
2112	TEMPDIR_COMPILE=$HOME/work/${usern}.$kennung
2113	if mkdir -p $TEMPDIR_COMPILE
2114	then
2115	printf "\n *** \"$TEMPDIR_COMPILE\" "
2116	printf "\n is generated as temporary directory for cross compiling\n"
2117	else
2118	printf "\n +++ creating directory \"$TEMPDIR_COMPILE\" "
2119	printf "\n needed for cross compilation failed"
2120	locat=compile
2121	exit
2122	fi
2123	else
2124	TEMPDIR_COMPILE=$TEMPDIR
2125	fi
2126
2127
2128	# PFADNAMEN FUER DAS MAKE-DEPOSITORY ERMITTELN
2129	line=""
2130	grep "%depository_path" $config_file > tmp_mrun
2131	while read line
2132	do
2133	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
2134	then
2135	if [[ "$(echo $line \| cut -d" " -s -f3)" = "" ]]
2136	then
2137	global_depository_path=`echo $line \| cut -d" " -s -f2`
2138	fi
2139	fi
2140	done < tmp_mrun
2141
2142	line=""
2143	grep " $localhost" $config_file \| grep "%depository_path" > tmp_mrun
2144	while read line
2145	do
2146	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
2147	then
2148	local_depository_path=`echo $line \| cut -d" " -s -f2`
2149	fi
2150	done < tmp_mrun
2151
2152	if [[ "$local_depository_path" = "" ]]
2153	then
2154	if [[ "$global_depository_path" != "" ]]
2155	then
2156	local_depository_path=$global_depository_path
2157	else
2158	printf "\n\n +++ no depository path found in configuration file"
2159	printf "\n for local host \"$localhost\" "
2160	printf "\n please set \"\%depository_path\" in configuration file\n"
2161	locat=config_file; exit
2162	fi
2163	fi
2164	eval local_depository_path=$local_depository_path
2165
2166	basename=`print $mainprog \| cut -f1 -d"."`
2167	eval make_depository=${local_depository_path}/${basename}_current_version.tar
2168	if [[ ! -f $make_depository ]]
2169	then
2170	printf "\n"
2171	printf "\n *** WARNING: make depository \"$make_depository\" not found"
2172	printf "\n \"make\" will fail, if the Makefile or other source files are missing\n"
2173	else
2174	cp $make_depository $TEMPDIR_COMPILE
2175	cd $TEMPDIR_COMPILE
2176	tar -xf $make_depository > /dev/null 2>&1
2177	cd - > /dev/null
2178	fi
2179
2180	cp SOURCES_FOR_RUN_$fname/* $TEMPDIR_COMPILE
2181
2182	# FALLS USER-INTERFACE VORHANDEN UND AUF DATEI MIT ANDEREM NAMEN
2183	# ALS user_interface.f90 LIEGT, DIESEN GEAENDERTEN NAMEN INS
2184	# MAKEFILE EINTRAGEN
2185	cd $TEMPDIR_COMPILE
2186	interface_file=`grep -l "END SUBROUTINE user_parin" $source_list`
2187	if [[ "$interface_file" != "" ]]
2188	then
2189	interface_file=`echo $interface_file \| cut -d"." -f1`
2190	mv Makefile Makefile_old
2191	sed "s/user_interface/$interface_file/g" Makefile_old > Makefile
2192	fi
2193	cd - > /dev/null
2194	else
2195	cp $executable ${TEMPDIR}/a.out
2196	fi
2197
2198
2199	# WECHSEL IN TEMPORAEREN KATALOG
2200	cd $TEMPDIR
2201	printf "\n *** changed to temporary directory: $TEMPDIR"
2202
2203
2204	# OUTPUT-DATEI-VERBINDUNGEN AUF TEMPORAERER DATEI ABLEGEN
2205	# DIESE DATEI KANN VON SPAETER AUFZURUFENDEN BENUTZERPROZEDUREN GELESEN
2206	# WERDEN, UM ZU LOKALEN DATEINAMEN GEHOERENDE PERMANENTE NAMEN ZU
2207	# ERMITTELN
2208	(( i = 0 ))
2209	while (( i < iout ))
2210	do
2211	(( i = i + 1 ))
2212	if [[ "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = tra \|\| "${actionout[$i]}" = trpe ]]
2213	then
2214	printf "${localout[$i]} ${actionout[$i]}\n${pathout[$i]}\n${localhost}_${fname}${endout[$i]}\n" >> OUTPUT_FILE_CONNECTIONS
2215	else
2216	printf "${localout[$i]} ${actionout[$i]}\n${pathout[$i]}\n${frelout[$i]}\n" >> OUTPUT_FILE_CONNECTIONS
2217	fi
2218	done
2219
2220
2221	# EVTL. UEBERSETZUNGSAKTIONEN STARTEN
2222	if [[ $do_compile = true ]]
2223	then
2224
2225
2226	# COMPILING WITH MAKE (ON NEC COMPILER IS CALLED ON HOST CROSS)
2227	printf "\n\n\n *** compilation starts \n$striche\n"
2228	printf " *** compilation with make using following options:\n"
2229	printf " compilername: $compiler_name\n"
2230	printf " options: $fopts\n"
2231	printf " preprocessor-directives: $cpp_options \n"
2232	printf " linker-options: $lopts \n"
2233	printf " source code files: $source_list \n"
2234
2235	if [[ $localhost = nech ]]
2236	then
2237	ssh 136.172.44.192 -l $usern ". /SX/opt/etc/initsx.sh; cd \$HOME/work/${usern}.$kennung; sxmake -f Makefile PROG=a.out F90=$compiler_name COPT=\"$cpp_options\" F90FLAGS=\"$fopts\" LDFLAGS=\"$lopts\" "
2238	cp $TEMPDIR_COMPILE/a.out .
2239	[[ $? != 0 ]] && compile_error=true
2240	rm -rf $TEMPDIR_COMPILE
2241	else
2242	[[ $localhost = lctit ]] && export LM_LICENSE_FILE=27050@tggls
2243	make -f Makefile PROG=a.out F90=$compiler_name COPT="$cpp_options" F90FLAGS="$fopts" LDFLAGS="$lopts"
2244	fi
2245
2246	if [[ $? != 0 \|\| "$compile_error" = true \|\| "$module_compile_error" = true ]]
2247	then
2248	printf "\n +++ error occured while compiling or linking"
2249	locat=compile
2250
2251	# WORKAROUND: REMOVE IF CONSTRUCT LATER, BUT KEEP THE EXIT!
2252	if [[ $localhost != lcsgib && $localhost != lcsgih ]]
2253	then
2254	exit
2255	else
2256	locat=normal
2257	fi
2258	else
2259	printf "$striche\n *** compilation finished \n"
2260	fi
2261	fi
2262
2263
2264	# FALLS NUR TESTWEISE KOMPILIERT WERDEN SOLLTE, IST MRUN JETZT FERTIG
2265	if [[ $local_compile = true ]]
2266	then
2267	cd $HOME
2268	rm -rf $TEMPDIR
2269	locat=local_compile; exit
2270	fi
2271
2272
2273	# BEREITSTELLEN DER INPUT-DATEIEN
2274	# SCHLEIFE UEBER ALLE VOM BENUTZER ANGEGEBENEN DATEIEN
2275	(( i = 0 ))
2276	while (( i < iin ))
2277	do
2278	(( i = i + 1 ))
2279	if (( i == 1 ))
2280	then
2281	printf "\n\n *** providing INPUT-files:\n$striche"
2282	fi
2283
2284
2285	# OPTIONALE DATEIEN BEI NICHTVORHANDENSEIN UEBERGEHEN
2286	if [[ "${transin[$i]}" = unavailable ]]
2287	then
2288	if [[ "${extin[$i]}" = "" \|\| "${extin[$i]}" = " " ]]
2289	then
2290	printf "\n +++ WARNING: input file \"${pathin[$i]}/${afname}${endin[$i]}\" "
2291	printf "\n is not available!"
2292	else
2293	printf "\n +++ WARNING: input file \"${pathin[$i]}/${afname}${endin[$i]}.${extin[$i]}\" "
2294	printf "\n is not available!"
2295	fi
2296	continue
2297	fi
2298
2299	# PRUEFEN, OB EINZELDATEI ODER DATEI PRO PROZESSOR
2300	files_for_pes=false; datentyp=file
2301	if [[ "${actionin[$i]}" = pe && -n $numprocs ]]
2302	then
2303	files_for_pes=true; datentyp=directory
2304	actionin[$i]=""
2305	elif [[ "${actionin[$i]}" = pe && ! -n $numprocs ]]
2306	then
2307	actionin[$i]=""
2308	elif [[ "${actionin[$i]}" = arpe && -n $numprocs ]]
2309	then
2310	files_for_pes=true; datentyp=directory
2311	actionin[$i]="ar"
2312	elif [[ "${actionin[$i]}" = arpe && ! -n $numprocs ]]
2313	then
2314	actionin[$i]="ar"
2315	elif [[ "${actionin[$i]}" = flpe && -n $numprocs ]]
2316	then
2317	files_for_pes=true; datentyp=directory
2318	actionin[$i]="fl"
2319	elif [[ "${actionin[$i]}" = flpe && ! -n $numprocs ]]
2320	then
2321	actionin[$i]="fl"
2322	fi
2323
2324	if [[ $files_for_pes = true ]]
2325	then
2326	printf "\n >>> INPUT: ${absnamein[$i]}/.... to ${localin[$i]}"
2327	else
2328	printf "\n >>> INPUT: ${absnamein[$i]} to ${localin[$i]}"
2329	fi
2330
2331	# INPUT-DATEI FUER EINEN FORTSETZUNGSLAUF. ES WIRD GEPRUEFT,
2332	# OB DIESE DATEI NOCH AUF DEM TEMPORAEREN DATENKATALOG VORHANDEN
2333	# IST. FALLS NICHT, WIRD VERSUCHT, SIE ANSCHLIESSEND VOM ARCHIV-
2334	# SERVER ZU HOLEN
2335	if [[ "${actionin[$i]}" = fl ]]
2336	then
2337	printf "\n $datentyp will be fetched from temporary directory \"${tmp_data_catalog}\" !"
2338	if [[ $files_for_pes = false ]]
2339	then
2340	if [[ -f "$tmp_data_catalog/${frelin[$i]}" ]]
2341	then
2342	ln $tmp_data_catalog/${frelin[$i]} ${localin[$i]}
2343	got_tmp[$i]=true
2344	elif [[ -f "$WORK/${frelin[$i]}" && $ignore_archive_error = true ]]
2345	then
2346	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" !"
2347	printf "\n *** trying to use backup copy in \"$WORK\" "
2348	cp $WORK/${frelin[$i]} ${localin[$i]}
2349	else
2350	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" "
2351	printf "\n or \"$tmp_data_catalog\" does not exist!"
2352	printf "\n *** trying to get copy from archive"
2353	actionin[$i]=ar
2354	fi
2355	else
2356	if [[ -d "$tmp_data_catalog/${frelin[$i]}" ]]
2357	then
2358	mkdir ${localin[$i]}
2359	cd $tmp_data_catalog/${frelin[$i]}
2360	for file in $(ls *)
2361	do
2362	ln $file $TEMPDIR/${localin[$i]}
2363	done
2364	cd $TEMPDIR
2365	got_tmp[$i]=true
2366	elif [[ -d "$WORK/${frelin[$i]}" && $ignore_archive_error = true ]]
2367	then
2368	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" !"
2369	printf "\n *** trying to use backup copy in \"$WORK\" "
2370	cp -r $WORK/${frelin[$i]} ${localin[$i]}
2371	else
2372	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" "
2373	printf "\n or \"$tmp_data_catalog\" does not exist!"
2374	printf "\n *** trying to get copy from archive"
2375	actionin[$i]=ar
2376	fi
2377	fi
2378	fi
2379
2380
2381	# DATEI LIEGT AUF ARCHIV-SERVER
2382	if [[ "${actionin[$i]}" = ar ]]
2383	then
2384
2385	if [[ $files_for_pes = false ]]
2386	then
2387	printf "\n file will be restored from archive-system ($archive_system)!"
2388	else
2389	printf "\n directory will be restored from archive-system ($archive_system)!"
2390	fi
2391
2392	file_restored=false
2393
2394	if [[ $archive_system = asterix ]]
2395	then
2396	do_stagein=true
2397	(( stagein_anz = 0 ))
2398	while [[ $do_stagein = true ]]
2399	do
2400	if [[ $files_for_pes = false ]]
2401	then
2402	stagein -O ${frelin[$i]} > STAGEIN_OUTPUT
2403	else
2404	stagein -t -O ${frelin[$i]} > STAGEIN_OUTPUT
2405	fi
2406	cat STAGEIN_OUTPUT
2407	if [[ $(grep -c "st.msg:i24" STAGEIN_OUTPUT) != 0 ]]
2408	then
2409	file_restored=true
2410	do_stagein=false
2411	else
2412	(( stagein_anz = stagein_anz + 1 ))
2413	if (( stagein_anz == 10 ))
2414	then
2415	printf "\n +++ stagein stoped after 10 tries"
2416	locat=stage
2417	exit
2418	fi
2419	printf "\n +++ restoring from archive failed, trying again:"
2420	sleep 900
2421	fi
2422	done
2423	elif [[ $archive_system = DMF ]]
2424	then
2425	if [[ $files_for_pes = false ]]
2426	then
2427	printf "\n +++ restoring of single files impossible with $archive_system !\n"
2428	locat=DMF
2429	exit
2430	else
2431	find $ARCHIVE/${frelin[$i]} -type m -print \| dmget
2432	cp -r $ARCHIVE/${frelin[$i]} $PWD
2433	file_restored=true
2434	fi
2435	elif [[ $archive_system = tivoli ]]
2436	then
2437	if [[ $files_for_pes = false ]]
2438	then
2439	if [[ $localhost = ibmh ]]
2440	then
2441	ssh $usern@hdata.hlrn.de "cp $PERM/${frelin[$i]} $PWD"
2442	else
2443	ssh $usern@bdata.hlrn.de "cp $PERM/${frelin[$i]} $PWD"
2444	fi
2445	else
2446	(( inode = 0 ))
2447	while (( inode < nodes ))
2448	do
2449	if [[ $localhost = ibmh ]]
2450	then
2451	ssh $usern@hdata.hlrn.de "cd $PWD; tar xf $PERM/${frelin[$i]}/${frelin[$i]}.node_$inode.tar"
2452	else
2453	ssh $usern@bdata.hlrn.de "cd $PWD; tar xf $PERM/${frelin[$i]}/${frelin[$i]}.node_$inode.tar"
2454	fi
2455	(( inode = inode + 1 ))
2456	done
2457	fi
2458	file_restored=true
2459	elif [[ $archive_system = ut ]]
2460	then
2461	if [[ $files_for_pes = false ]]
2462	then
2463	cp $UT/${frelin[$i]} .
2464	else
2465	(( inode = 0 ))
2466	while (( inode < nodes ))
2467	do
2468	tar xf $UT/${frelin[$i]}/${frelin[$i]}.node_$inode.tar
2469	(( inode = inode + 1 ))
2470	done
2471	fi
2472	file_restored=true
2473	else
2474	printf "\n +++ archive_system=\"$archive_system\" restore impossible!"
2475	locat=rearchive
2476	exit
2477	fi
2478
2479	if [[ $file_restored = true ]]
2480	then
2481
2482	# DATEI AUCH AUF TEMPORAERES DATENVERZEICHNIS LEGEN, DAMIT
2483	# SIE BEI WEITEREN ZUGRIFFEN NOCH VORHANDEN IST
2484	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog; chmod g+rx $tmp_data_catalog
2485	if [[ $files_for_pes = false ]]
2486	then
2487	ln -f ${frelin[$i]} $tmp_data_catalog/${frelin[$i]}
2488	else
2489	mkdir $tmp_data_catalog/${frelin[$i]}
2490	ln -f ${frelin[$i]}/* $tmp_data_catalog/${frelin[$i]}
2491	fi
2492	got_tmp[$i]=true
2493
2494	# DATEI UNTER LOKALEM NAMEN ZUR VERFUEGUNG STELLEN
2495	mv ${frelin[$i]} ${localin[$i]}
2496
2497	fi
2498	fi
2499
2500
2501	# DATEI LIEGT IM VOM BENUTZER ANGEGEBENEN VERZEICHNIS
2502	if [[ "${actionin[$i]}" = "" \|\| "${actionin[$i]}" = "di" \|\| "${actionin[$i]}" = "npe" ]]
2503	then
2504
2505	if [[ "${actionin[$i]}" = "npe" && -n $numprocs ]]
2506	then
2507
2508	# DATEI WIRD FUER DIE PROZESSOREN EINES PARALLERECHNERS BEREITGESTELLT
2509	printf "\n file will be provided for $numprocs processors"
2510	mkdir ${localin[$i]}
2511	ival=$numprocs
2512	(( ii = 0 ))
2513	while (( ii <= ival-1 ))
2514	do
2515	if (( ii < 10 ))
2516	then
2517	cp ${absnamein[$i]} ${localin[$i]}/_000$ii
2518	elif (( ii < 100 ))
2519	then
2520	cp ${absnamein[$i]} ${localin[$i]}/_00$ii
2521	elif (( ii < 1000 ))
2522	then
2523	cp ${absnamein[$i]} ${localin[$i]}/_0$ii
2524	else
2525	cp ${absnamein[$i]} ${localin[$i]}/_$ii
2526	fi
2527	(( ii = ii + 1 ))
2528	done
2529
2530	else
2531
2532	if [[ $files_for_pes = true ]]
2533	then
2534
2535	# DIE DEN PROZESSOREN EINES PARALLELRECHNERS ZUGEHOERIGEN
2536	# DATEIEN WERDEN BEREITGESTELLT, INDEM ZUERST DER GESAMTE
2537	# KATALOGINHALT KOPIERT UND DANN DIE EINZELNEN DATEIEN
2538	# PER MOVE UMBENANNT WERDEN
2539	printf "\n providing $numprocs files for the respective processors"
2540	mkdir ${localin[$i]}
2541	cp -r ${absnamein[$i]}/* ${localin[$i]}
2542
2543	else
2544	# BEREITSTELLUNG AUF EINPROZESSORRECHNERN
2545	cp ${absnamein[$i]} ${localin[$i]}
2546	fi
2547	fi
2548	fi
2549
2550	done
2551	if (( i != 0 ))
2552	then
2553	printf "\n$striche\n *** all INPUT-files provided \n"
2554	fi
2555
2556
2557	# NAMELIST-DATEI MIT WERTEN VON ENVIRONMENT-VARIABLEN ERZEUGEN (ZU
2558	# LESEN VON PALM)
2559	cat > ENVPAR << %%END%%
2560	&envpar run_identifier = '$fname', host = '$localhost',
2561	write_binary = '$write_binary', tasks_per_node = $tasks_per_node,
2562	maximum_cpu_time_allowed = ${cpumax}.,
2563	revision = '$global_revision' /
2564
2565	%%END%%
2566
2567
2568	# EVENTUELLE INPUT-KOMMANDOS ABARBEITEN
2569	(( i = 0 ))
2570	while (( i < iic ))
2571	do
2572	(( i = i + 1 ))
2573	if (( i == 1 ))
2574	then
2575	printf "\n\n *** execution of INPUT-commands:\n$striche"
2576	fi
2577	printf "\n >>> ${in_command[$i]}"
2578	eval ${in_command[$i]}
2579	if (( i == iic ))
2580	then
2581	printf "\n$striche\n"
2582	fi
2583	done
2584
2585
2586	# VERBLEIBENDE CPU-ZEIT BERECHNEN
2587	cpurest=${cpumax}.
2588
2589
2590	# PROGRAMMSTART
2591	printf "\n\n *** execution starts in directory\n \"`pwd`\"\n$striche\n"
2592	PATH=$PATH:$TEMPDIR
2593
2594	if [[ "$cond1" = debug \|\| "$cond2" = debug ]]
2595	then
2596	if [[ "$ENVIRONMENT" = BATCH ]]
2597	then
2598	printf "\n +++ debug is allowed in interactive mode only"
2599	locat=debug
2600	exit
2601	fi
2602	if [[ $localhost = decalpha ]]
2603	then
2604	dxladebug a.out
2605	elif [[ $localhost = ibmb \|\| $localhost = ibmh ]]
2606	then
2607
2608	# SETUP THE IBM MPI ENVIRONMENT
2609	export MP_SHARED_MEMORY=yes
2610	export AIXTHREADS_SCOPE=S
2611	export OMP_NUM_THREADS=$threads_per_task
2612	export AUTHSTATE=files
2613	export XLFRTEOPTS="nlwidth=132:err_recovery=no" # RECORD-LENGTH OF NAMELIST-OUTPUT
2614
2615	# FOLLOWING OPTIONS ARE MANDATORY FOR TOTALVIEW
2616	export MP_ADAPTER_USE=shared
2617	export MP_CPU_USE=multiple
2618	export MP_TIMEOUT=1200
2619
2620	unset MP_TASK_AFFINITY
2621
2622	# SO FAR, TOTALVIEW NEEDS HOSTFILE MECHANISM FOR EXECUTION
2623	#(( ii = 1 ))
2624	#while (( ii <= $numprocs ))
2625	#do
2626	# echo $localhost_realname >> hostfile
2627	# (( ii = ii + 1 ))
2628	#done
2629	#export MP_HOSTFILE=hostfile
2630
2631	if [[ "$LOADLBATCH" = yes ]]
2632	then
2633	totalview poe a.out $ROPTS
2634	else
2635	echo totalview poe -a a.out -procs $numprocs -rmpool 0 -nodes 1 $ROPTS
2636	export TVDSVRLAUNCHCMD=ssh
2637	totalview poe -a a.out -procs $numprocs -rmpool 0 -nodes 1 $ROPTS
2638	fi
2639	else
2640	printf "\n +++ no debug available on \"$localhost\" "
2641	printf "\n or not implemented in mrun so far"
2642	locat=debug
2643	exit
2644	fi
2645	else
2646	if [[ -n $numprocs ]]
2647	then
2648
2649	# RUNNING THE PROGRAM ON PARALLEL MACHINES
2650	if [[ $(echo $host \| cut -c1-3) = ibm ]]
2651	then
2652	# SETUP THE IBM MPI ENVIRONMENT
2653	export MP_SHARED_MEMORY=yes
2654	export AIXTHREAD_SCOPE=S
2655	export OMP_NUM_THREADS=$threads_per_task
2656	export XLSMPOPTS="spins=0:yields=0:stack=20000000"
2657	export AUTHSTATE=files
2658	export XLFRTEOPTS="nlwidth=132:err_recovery=no" # RECORD-LENGTH OF NAMELIST-OUTPUT
2659	# export MP_PRINTENV=yes
2660
2661	# TUNING-VARIABLEN ZUR VERBESSERUNG DER KOMMUNIKATION
2662	# ZEIGEN ABER DERZEIT (SEP 04, FEDERATION) KAUM WIRKUNG
2663	export MP_WAIT_MODE=poll
2664	[[ $node_usage = not_shared ]] && export MP_SINGLE_THREAD=yes
2665	# export MP_EAGER_LIMIT=65535
2666
2667	# # TESTWEISE FUER TURBOMPI (JAN 05)
2668	# export MPJ_MTAB=128
2669	# export MPJ_ALLTOALL=1
2670	# export MPJ_ALLTOALLV=1
2671
2672	if [[ "$LOADLBATCH" = yes ]]
2673	then
2674	printf "\n--- Control: OMP_NUM_THREADS = \"$OMP_NUM_THREADS\" \n"
2675	if [[ "$cond1" = hpmcount \|\| "$cond2" = hpmcount ]]
2676	then
2677	/opt/optibm/HPM_2_4_1/bin/hpmcount a.out $ROPTS
2678	else
2679	poe ./a.out $ROPTS
2680	fi
2681	else
2682	if [[ $localhost = ibmb \|\| $localhost = ibmh \|\| $localhost = ibms ]]
2683	then
2684	poe a.out -procs $numprocs -nodes 1 -rmpool 0 $ROPTS
2685	elif [[ $localhost = ibmy ]]
2686	then
2687	if [[ -f $hostfile ]]
2688	then
2689	cp $hostfile hostfile
2690	else
2691	(( ii = 1 ))
2692	while (( ii <= $numprocs ))
2693	do
2694	echo $localhost_realname >> hostfile
2695	(( ii = ii + 1 ))
2696	done
2697	fi
2698	export MP_HOSTFILE=hostfile
2699	./a.out -procs $tasks_per_node $ROPTS
2700	else
2701	if [[ "$host_file" = "" ]]
2702	then
2703	printf "\n +++ no hostfile given in configuration file"
2704	locat=config_file
2705	exit
2706	else
2707	eval host_file=$host_file
2708	fi
2709	export MP_HOSTFILE=$host_file
2710	poe a.out -procs $numprocs -tasks_per_node $numprocs $ROPTS
2711	fi
2712	fi
2713	elif [[ $host = nech \|\| $host = neck ]]
2714	then
2715	(( ii = nodes ))
2716	if [[ $ii = 1 ]]
2717	then
2718	export F_ERRCNT=0 # acceptable number of errors before program is stopped
2719	export MPIPROGINF=YES
2720	# export F_TRACE=YES\|FMT1\|FMT2 # output of ftrace informations to job protocol
2721	echo "*** execution on single node with mpirun"
2722	mpirun -np $numprocs ./a.out $ROPTS
2723	else
2724	(( i = 0 ))
2725	while (( i < ii ))
2726	do
2727	echo "-h $i -p $tasks_per_node -e ./mpi_exec_shell" >> multinode_config
2728	(( i = i + 1 ))
2729	done
2730
2731	echo "#!/bin/sh" > mpi_exec_shell
2732	echo " " >> mpi_exec_shell
2733	echo "set -u" >> mpi_exec_shell
2734	echo "F_ERRCNT=0" >> mpi_exec_shell
2735	echo "MPIPROGINV=YES" >> mpi_exec_shell
2736	echo "OMP_NUM_THREADS=$threads_per_task" >> mpi_exec_shell
2737	echo "cpurest=$cpurest" >> mpi_exec_shell
2738	echo "fname=$fname" >> mpi_exec_shell
2739	echo "localhost=$localhost" >> mpi_exec_shell
2740	echo "return_addres=$return_addres" >> mpi_exec_shell
2741	echo "return_username=$return_username" >> mpi_exec_shell
2742	echo "tasks_per_node=$tasks_per_node" >> mpi_exec_shell
2743	echo "write_binary=$write_binary" >> mpi_exec_shell
2744	echo "use_seperate_pe_for_dvrp_output=$use_seperate_pe_for_dvrp_output" >> mpi_exec_shell
2745	echo " " >> mpi_exec_shell
2746	echo "export F_ERRCNT" >> mpi_exec_shell
2747	echo "export MPIPROGINV" >> mpi_exec_shell
2748	echo "export OMP_NUM_THREADS" >> mpi_exec_shell
2749	echo "export cpurest" >> mpi_exec_shell
2750	echo "export fname" >> mpi_exec_shell
2751	echo "export localhost" >> mpi_exec_shell
2752	echo "export return_addres" >> mpi_exec_shell
2753	echo "export return_username" >> mpi_exec_shell
2754	echo "export tasks_per_node" >> mpi_exec_shell
2755	echo "export write_binary" >> mpi_exec_shell
2756	echo "export use_seperate_pe_for_dvrp_output" >> mpi_exec_shell
2757	echo " " >> mpi_exec_shell
2758	echo "exec ./a.out" >> mpi_exec_shell
2759
2760	chmod u+x mpi_exec_shell
2761	export MPIPROGINF=YES
2762	mpirun -f multinode_config &
2763	wait
2764
2765	fi
2766	elif [[ $(echo $host \| cut -c1-2) = lc && $host != lctit ]]
2767	then
2768
2769	# COPY HOSTFILE FROM SOURCE DIRECTORY OR CREATE IT, IF IT
2770	# DOES NOT EXIST
2771	if [[ $host != lcsgih && $host != lcsgib ]]
2772	then
2773	if [[ -f $hostfile ]]
2774	then
2775	cp $hostfile hostfile
2776	else
2777	(( ii = 1 ))
2778	while (( ii <= $numprocs / $threads_per_task ))
2779	do
2780	echo $localhost_realname >> hostfile
2781	(( ii = ii + 1 ))
2782	done
2783	fi
2784	eval zeile=\"`head -n $ii hostfile`\"
2785	printf "\n *** running on: $zeile"
2786	fi
2787
2788	(( ii = $numprocs / $threads_per_task ))
2789	export OMP_NUM_THREADS=$threads_per_task
2790	echo "OMP_NUM_THREADS=$OMP_NUM_THREADS"
2791	if [[ $threads_per_task != 1 ]]
2792	then
2793	printf "\n threads per task: $threads_per_task"
2794	fi
2795	if [[ $run_coupled_model = false ]]
2796	then
2797	printf "\n\n"
2798	if [[ $host = lcsgih \|\| $host = lcsgib ]]
2799	then
2800	# mpirun -machinefile $PBS_NODEFILE -np $ii a.out $ROPTS
2801	ulimit -s 30000
2802	ulimit -a
2803	# mpirun_rsh -hostfile $PBS_NODEFILE -np $ii OMP_NUM_THREADS=$OMP_NUM_THREADS palm $ROPTS
2804	export MV2_NUM_PORTS=2
2805	# export MV2_CPU_MAPPING=0:1:2:3
2806	mpiexec ./palm $ROPTS
2807	elif [[ $host = lcxt4 ]]
2808	then
2809	aprun -n $ii -N $tasks_per_node a.out $ROPTS
2810	else
2811	echo "no_coupling" > runfile_atmos
2812	mpiexec -machinefile hostfile -n $ii a.out < runfile_atmos $ROPTS
2813	fi
2814	else
2815	(( iii = ii / 2 ))
2816	echo "atmosphere_to_ocean" > runfile_atmos
2817	echo "ocean_to_atmosphere" > runfile_ocean
2818
2819	printf "\n coupled run ($iii atmosphere, $iii ocean)"
2820	printf "\n\n"
2821
2822	if [[ $host == lcxt4 ]]
2823	then
2824	aprun -n $iii -N $tasks_per_node a.out < runfile_atmos $ROPTS &
2825	aprun -n $iii -N $tasks_per_node a.out < runfile_ocean $ROPTS &
2826	else
2827
2828	# WORKAROUND BECAUSE mpiexec WITH -env option IS NOT AVAILABLE ON SOME SYSTEMS
2829	mpiexec -machinefile hostfile -n $iii a.out $ROPTS < runfile_atmos &
2830	mpiexec -machinefile hostfile -n $iii a.out $ROPTS < runfile_ocean &
2831	# mpiexec -machinefile hostfile -n $iii -env coupling_mode atmosphere_to_ocean a.out $ROPTS &
2832	# mpiexec -machinefile hostfile -n $iii -env coupling_mode ocean_to_atmosphere a.out $ROPTS &
2833	fi
2834	wait
2835	fi
2836
2837	# if [[ $scirocco = true ]]
2838	# then
2839	# mpiexec -machinefile hostfile -n $ii a.out $ROPTS
2840	# else
2841	# mpirun -machinefile hostfile -np $ii a.out $ROPTS
2842	# fi
2843
2844	elif [[ $host = decalpha ]]
2845	then
2846	dmpirun -np $numprocs a.out $ROPTS
2847	elif [[ $host = lctit ]]
2848	then
2849	export runfile=runfile.$kennung
2850
2851	echo "cd $PWD" > $runfile
2852	echo "export OMP_NUM_THREADS=$OMP_NUM_THREADS" >> $runfile
2853	echo "export cpurest=$cpurest" >> $runfile
2854	echo "export fname=$fname" >> $runfile
2855	echo "export localhost=$localhost" >> $runfile
2856	echo "export return_addres=$return_addres" >> $runfile
2857	echo "export return_username=$return_username" >> $runfile
2858	echo "export tasks_per_node=$tasks_per_node" >> $runfile
2859	echo "export write_binary=$write_binary" >> $runfile
2860	echo "export use_seperate_pe_for_dvrp_output=$use_seperate_pe_for_dvrp_output" >> $runfile
2861	echo "./a.out" >> $runfile
2862	chmod u+x $runfile
2863
2864	if [[ "$QUEUE" = interactive ]]
2865	then
2866	mpirun -np $numprocs a.out $ROPTS
2867	else
2868	(( mem_tsubame = $memory / 1024.0 ))
2869	echo "Memory for Tsubame for each process in GB:", $mem_tsubame
2870	# n1ge -fore -g 1S060156 -mpi $numprocs -mem 4 -N palm -q $queue a.out $ROPTS
2871	/n1ge/TITECH_GRID/tools/bin/n1ge -fore -g $group_number -mpi ${numprocs}:$tasks_per_node -mem $mem_tsubame -N palm -rt $minuten -q $queue a.out $ROPTS
2872	fi
2873
2874	rm $runfile
2875	else
2876	mpprun -n $numprocs a.out $ROPTS
2877	fi
2878	[[ $? != 0 ]] && execution_error=true
2879
2880
2881	# PERFORMANCE-AUSWERTUNG MIT APPRENTICE
2882	if [[ "$cond1" = apprentice \|\| "$cond2" = apprentice ]]
2883	then
2884	apprentice
2885	fi
2886	else
2887	a.out $ROPTS
2888	fi
2889	fi
2890	if [[ $? != 0 \|\| $execution_error = true ]]
2891	then
2892
2893	# ABBRUCH BEI LAUFZEITFEHLER
2894	# [[ ! ( "$cond1" = debug \|\| "$cond2" = debug ) ]] && cat aout_output*
2895	printf "\n +++ runtime error occured"
2896	locat=execution
2897	exit
2898	else
2899	# [[ ! ( "$cond1" = debug \|\| "$cond2" = debug ) ]] && cat aout_output*
2900	printf "\n$striche\n *** execution finished \n"
2901	fi
2902
2903
2904
2905	# EVENTUELLE OUTPUT-KOMMANDOS ABARBEITEN
2906	(( i = 0 ))
2907	while (( i < ioc ))
2908	do
2909	(( i = i + 1 ))
2910	if (( i == 1 ))
2911	then
2912	printf "\n\n *** execution of OUTPUT-commands:\n$striche"
2913	fi
2914	printf "\n >>> ${out_command[$i]}"
2915	eval ${out_command[$i]}
2916	if (( i == ioc ))
2917	then
2918	printf "\n$striche\n"
2919	fi
2920	done
2921
2922
2923	# EVTL. INHALT DES AKTUELLEN VERZEICHNISSES AUSGEBEN
2924	if [[ $do_trace = true ]]
2925	then
2926	printf "\n\n"
2927	ls -al
2928	fi
2929
2930
2931
2932	# OUTPUT-DATEIEN AN IHRE ZIELORTE KOPIEREN
2933	(( i = 0 ))
2934	while (( i < iout ))
2935	do
2936	(( i = i + 1 ))
2937	if (( i == 1 ))
2938	then
2939	printf "\n\n *** saving OUTPUT-files:\n$striche"
2940	fi
2941
2942	# PRUEFEN, OB EINZELDATEI ODER DATEI PRO PROZESSOR
2943	files_for_pes=false; filetyp=file
2944	if [[ "${actionout[$i]}" = pe && -n $numprocs ]]
2945	then
2946	files_for_pes=true; filetyp=directory
2947	actionout[$i]=""
2948	elif [[ "${actionout[$i]}" = pe && ! -n $numprocs ]]
2949	then
2950	actionout[$i]=""
2951	elif [[ "${actionout[$i]}" = arpe && -n $numprocs ]]
2952	then
2953	files_for_pes=true; filetyp=directory
2954	actionout[$i]="ar"
2955	elif [[ "${actionout[$i]}" = arpe && ! -n $numprocs ]]
2956	then
2957	actionout[$i]="ar"
2958	elif [[ "${actionout[$i]}" = flpe && -n $numprocs ]]
2959	then
2960	files_for_pes=true; filetyp=directory
2961	actionout[$i]="fl"
2962	elif [[ "${actionout[$i]}" = flpe && ! -n $numprocs ]]
2963	then
2964	actionout[$i]="fl"
2965	elif [[ "${actionout[$i]}" = trpe && -n $numprocs ]]
2966	then
2967	files_for_pes=true; filetyp=directory
2968	actionout[$i]="tr"
2969	elif [[ "${actionout[$i]}" = trpe && ! -n $numprocs ]]
2970	then
2971	actionout[$i]="tr"
2972	fi
2973
2974	if [[ ! -f ${localout[$i]} && $files_for_pes = false ]]
2975	then
2976	printf "\n +++ temporary OUTPUT-file ${localout[$i]} does not exist\n"
2977	elif [[ ! -f ${localout[$i]}/_0000 && $files_for_pes = true ]]
2978	then
2979	printf "\n +++ temporary OUTPUT-file ${localout[$i]}/.... does not exist\n"
2980	else
2981
2982
2983	# KOPIEREN PER FTP/SCP (IMMER IM BINAERMODUS, -M: FALLS ZIELKATALOG
2984	# NICHT VORHANDEN, WIRD VERSUCHT, IHN ANZULEGEN), ABER NUR BEI
2985	# REMOTE-RECHNUNGEN
2986	if [[ "${actionout[$i]}" = tr ]]
2987	then
2988	if [[ $localhost != $fromhost ]]
2989	then
2990	if [[ $files_for_pes = false ]]
2991	then
2992	cps=""
2993	cst=""
2994	else
2995	cps=-c
2996	cst="/"
2997	fi
2998	if [[ $localhost = ibmh \|\| $localhost = ibmb \|\| $localhost = nech ]]
2999	then
3000
3001	# TRANSFER IN EIGENSTAENDIGEM JOB
3002	# ZUERST KOPIE DER DATEI INS TEMPORAERE DATENVERZEICHNIS
3003	[[ ! -d $tmp_data_catalog/TRANSFER ]] && mkdir -p $tmp_data_catalog/TRANSFER
3004	file_to_transfer=${fname}_${localout[$i]}_to_transfer_$kennung
3005	if [[ $files_for_pes = false ]]
3006	then
3007	ln -f ${localout[$i]} $tmp_data_catalog/TRANSFER/$file_to_transfer
3008	else
3009	mkdir $tmp_data_catalog/TRANSFER/$file_to_transfer
3010	ln ${localout[$i]}/* $tmp_data_catalog/TRANSFER/$file_to_transfer
3011	fi
3012
3013	echo "set -x" > transfer_${localout[$i]}
3014	echo "cd $tmp_data_catalog/TRANSFER" >> transfer_${localout[$i]}
3015
3016	printf "\n >>> OUTPUT: ${localout[$i]}$cst by SCP in seperate job to"
3017	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}$cst"
3018	printf "\n or higher cycle\n"
3019	echo "batch_scp $cps -b -m -u $return_username $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
3020
3021	echo "[[ \$? = 0 ]] && rm $file_to_transfer" >> transfer_${localout[$i]}
3022
3023	if [[ $localhost = nech ]]
3024	then
3025	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 900 transfer_${localout[$i]}
3026	else
3027	if [[ "$LOGNAME" = b323013 ]]
3028	then
3029	subjob -v -q c1 -X 0 -m 1000 -t 900 -c $job_catalog transfer_${localout[$i]}
3030	else
3031	subjob -d -v -q c1 -X 0 -m 1000 -t 900 -c $job_catalog transfer_${localout[$i]}
3032	fi
3033	fi
3034
3035	else
3036
3037	# TRANSFER INNERHALB DIESES JOBS
3038	transfer_failed=false
3039	printf "\n >>> OUTPUT: ${localout[$i]}$cst by SCP to"
3040	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}$cst\n"
3041	batch_scp $cps -b -m -u $return_username $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
3042	[[ $? != 0 ]] && transfer_failed=true
3043
3044	# BEI FEHLGESCHLAGENEM TRANSFER SICHERUNGSKOPIE AUF
3045	# LOKALER MASCHINE ANLEGEN
3046	if [[ $transfer_failed = true ]]
3047	then
3048	printf " +++ transfer failed. Trying to save a copy on the local host under:\n"
3049	printf " ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung\n"
3050
3051	# ERSTMAL PRUEFEN, OB VERZEICHNIS EXISTIERT. GEGEBENENFALLS
3052	# ANLEGEN.
3053	eval local_catalog=${pathout[$i]}
3054	if [[ ! -d $local_catalog ]]
3055	then
3056	printf " *** local directory does not exist. Trying to create:\n"
3057	printf " $local_catalog \n"
3058	mkdir -p $local_catalog
3059	fi
3060	eval cp ${localout[$i]} ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung
3061	transfer_problems=true
3062	fi
3063	fi
3064	else
3065
3066	# WERTZUWEISUNG, SO DASS WEITER UNTEN NUR KOPIERT WIRD
3067	actionout[$i]=""
3068	fi
3069	fi
3070
3071
3072	# APPEND PER FTP/SCP (IMMER IM BINAERMODUS, -M: FALLS ZIELKATALOG
3073	# NICHT VORHANDEN, WIRD VERSUCHT, IHN ANZULEGEN), ABER NUR BEI
3074	# REMOTE-RECHNUNGEN
3075	if [[ "${actionout[$i]}" = tra ]]
3076	then
3077	if [[ $localhost != $fromhost ]]
3078	then
3079	if [[ $localhost = ibmh \|\| $localhost = ibmb \|\| $localhost = nech ]]
3080	then
3081
3082	# TRANSFER IN EIGENSTAENDIGEM JOB
3083	# ZUERST KOPIE DER DATEI INS TEMPORAERE DATENVERZEICHNIS
3084	[[ ! -d $tmp_data_catalog/TRANSFER ]] && mkdir -p $tmp_data_catalog/TRANSFER
3085	file_to_transfer=${fname}_${localout[$i]}_to_transfer_$kennung
3086	ln -f ${localout[$i]} $tmp_data_catalog/TRANSFER/$file_to_transfer
3087
3088	echo "set -x" > transfer_${localout[$i]}
3089	echo "cd $tmp_data_catalog/TRANSFER" >> transfer_${localout[$i]}
3090
3091	printf "\n >>> OUTPUT: ${localout[$i]} append by SCP in seperate job to"
3092	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}"
3093	printf "\n or higher cycle\n"
3094	echo "batch_scp -A -b -m -u $return_username $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
3095
3096	echo "[[ \$? = 0 ]] && rm $file_to_transfer" >> transfer_${localout[$i]}
3097
3098	if [[ $localhost = nech ]]
3099	then
3100	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 900 transfer_${localout[$i]}
3101	else
3102	if [[ $LOGNAME = b323013 ]]
3103	then
3104	subjob -v -q c1 -X 0 -m 1000 -t 900 -c $job_catalog transfer_${localout[$i]}
3105	else
3106	subjob -d -v -q c1 -X 0 -m 1000 -t 900 -c $job_catalog transfer_${localout[$i]}
3107	fi
3108	fi
3109
3110	else
3111
3112	# TRANSFER INNERHALB DIESES JOBS
3113	transfer_failed=false
3114	printf "\n >>> OUTPUT: ${localout[$i]} append by SCP to"
3115	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}\n"
3116	batch_scp -A -b -m -u $return_username $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
3117	[[ $? != 0 ]] && transfer_failed=true
3118
3119	# BEI FEHLGESCHLAGENEM TRANSFER SICHERUNGSKOPIE AUF
3120	# LOKALER MASCHINE ANLEGEN
3121	if [[ $transfer_failed = true ]]
3122	then
3123	printf " +++ transfer failed. Trying to save a copy on the local host under:\n"
3124	printf " ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung\n"
3125
3126	# ERSTMAL PRUEFEN, OB VERZEICHNIS EXISTIERT. GEGEBENENFALLS
3127	# ANLEGEN
3128	eval local_catalog=${pathout[$i]}
3129	if [[ ! -d $local_catalog ]]
3130	then
3131	printf " *** local directory does not exist. Trying to create:\n"
3132	printf " $local_catalog \n"
3133	mkdir -p $local_catalog
3134	fi
3135
3136	eval cp ${localout[$i]} ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung
3137	transfer_problems=true
3138	fi
3139	fi
3140	else
3141
3142	# WERTZUWEISUNG, SO DASS WEITER UNTEN NUR APPEND AUF
3143	# LOKALER MASCHINE DURCHGEFUEHRT WIRD
3144	actionout[$i]=a
3145	fi
3146	fi
3147
3148
3149	# OUTPUT-DATEI FUER EINEN FORTSETZUNGSLAUF. DATEI WIRD PER
3150	# LINK AUF DEN TEMPORAEREN DATENKATALOG GELEGT. OPTION -f WIRD
3151	# VERWENDET, FALLS DORT NOCH EINE DATEI GLEICHEN NAMENS VORHANDEN
3152	# SEIN SOLLTE. ANSCHLIESSEND WIRD SEINE ARCHIVIERUNG ANGESTOSSEN
3153	if [[ "${actionout[$i]}" = fl ]]
3154	then
3155	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
3156	chmod g+rx $tmp_data_catalog
3157	if [[ $files_for_pes = false ]]
3158	then
3159	printf "\n >>> OUTPUT: ${localout[$i]} to"
3160	printf "\n $tmp_data_catalog/${frelout[$i]} (temporary data catalog)\n"
3161	ln -f ${localout[$i]} $tmp_data_catalog/${frelout[$i]}
3162	else
3163	printf "\n >>> OUTPUT: ${localout[$i]}/.... to"
3164	printf "\n $tmp_data_catalog/${frelout[$i]} (temporary data catalog)\n"
3165	mkdir $tmp_data_catalog/${frelout[$i]}
3166	cd ${localout[$i]}
3167	for file in $(ls *)
3168	do
3169	ln -f $file $tmp_data_catalog/${frelout[$i]}
3170	done
3171	cd $TEMPDIR
3172	fi
3173
3174
3175	# ARCHIVIERUNGSJOB WIRD ERZEUGT UND ABGESCHICKT
3176	if [[ $store_on_archive_system = true ]]
3177	then
3178
3179	if [[ $archive_system = asterix ]]
3180	then
3181	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3182	if [[ $files_for_pes = false ]]
3183	then
3184	echo "stageout ${frelout[$i]} > STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3185	else
3186	echo "stageout -t ${frelout[$i]} > STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3187	fi
3188	echo "cat STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3189	echo "if [[ \$(grep -c \"st.msg:150\" STAGE_OUTPUT${i}_$kennung) != 0 ]]" >> archive_${frelout[$i]}
3190	echo "then" >> archive_${frelout[$i]}
3191	echo " do_stageout=false" >> archive_${frelout[$i]}
3192	echo "else" >> archive_${frelout[$i]}
3193	echo " echo \" +++ $filetyp ${frelout[$i]} could not be stored on archive-system\" " >> archive_${frelout[$i]}
3194	echo " cat /dev/null > ~/job_queue/ARCHIVE_ERROR_$fname" >> archive_${frelout[$i]}
3195	echo " cat STAGE_OUTPUT${i}_$kennung > ~/job_queue/archive_${frelout[$i]}_error" >> archive_${frelout[$i]}
3196	echo " echo \" *** $filetyp ${frelout[$i]} will be copied to \$WORK as backup\" " >> archive_${frelout[$i]}
3197	if [[ $files_for_pes = false ]]
3198	then
3199	echo " cp ${frelout[$i]} \$WORK" >> archive_${frelout[$i]}
3200	else
3201	echo " cp -r ${frelout[$i]} \$WORK/${frelout[$i]}" >> archive_${frelout[$i]}
3202	fi
3203	echo " echo \" *** $filetyp ${frelout[$i]} saved\" " >> archive_${frelout[$i]}
3204	echo "fi" >> archive_${frelout[$i]}
3205	echo "rm STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3206	elif [[ $archive_system = DMF ]]
3207	then
3208	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3209	if [[ $files_for_pes = false ]]
3210	then
3211	printf "\n +++ archiving of single files impossible with $archive_system !\n"
3212	locat=DMF
3213	exit
3214	else
3215	# FUER RECHNER IN JUELICH. DORT KOENNTEN AUCH
3216	# EINZELNE DATEIEN GESICHERT WERDEN (SPAETER KORR.)
3217	echo "rm -rf \$ARCHIVE/${frelout[$i]}" >> archive_${frelout[$i]}
3218	echo "cp -r ${frelout[$i]} \$ARCHIVE" >> archive_${frelout[$i]}
3219	fi
3220	elif [[ $archive_system = tivoli ]]
3221	then
3222	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3223	if [[ $files_for_pes = false ]]
3224	then
3225	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3226	echo "set -x" >> archive_${frelout[$i]}
3227	echo "rm -rf \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3228	echo "cp ${frelout[$i]} \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3229	else
3230
3231	echo "set -x" >> archive_${frelout[$i]}
3232	echo "rm -rf \$PERM/${frelout[$i]}/*" >> archive_${frelout[$i]}
3233	echo "[[ ! -d \$PERM/${frelout[$i]} ]] && mkdir $PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3234	cd $tmp_data_catalog
3235	all_files=`ls -1 ${frelout[$i]}/*`
3236	cd - > /dev/null
3237	(( inode = 0 ))
3238	(( tp1 = tasks_per_node + 1 ))
3239	while (( inode < nodes ))
3240	do
3241	# echo "*** all_files = \"$all_files\" "
3242	files=`echo $all_files \| cut -d" " -f1-$tasks_per_node`
3243	all_files=`echo $all_files \| cut -d" " -f$tp1-`
3244	# echo "*** tasks_per_node = \"$tasks_per_node\" "
3245	# echo "*** files = \"$files\" "
3246	# echo "*** all_files = \"$all_files\" "
3247	echo "tar cvf \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar $files" >> archive_${frelout[$i]}
3248	echo "dsmc incremental \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar" >> archive_${frelout[$i]}
3249	echo "dsmmigrate \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar" >> archive_${frelout[$i]}
3250	(( inode = inode + 1 ))
3251	done
3252	# echo "rm -rf \$PERM/${frelout[$i]}.tar" >> archive_${frelout[$i]}
3253	# echo "tar cvf \$PERM/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
3254	fi
3255	elif [[ $archive_system = ut ]]
3256	then
3257	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3258	if [[ $files_for_pes = false ]]
3259	then
3260	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3261	echo "set -x" >> archive_${frelout[$i]}
3262	echo "rm -rf \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3263	echo "cp ${frelout[$i]} \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3264	else
3265
3266	echo "set -x" >> archive_${frelout[$i]}
3267	echo "rm -rf \$UT/${frelout[$i]}/*" >> archive_${frelout[$i]}
3268	echo "[[ ! -d \$UT/${frelout[$i]} ]] && mkdir $UT/${frelout[$i]}" >> archive_${frelout[$i]}
3269	cd $tmp_data_catalog
3270	all_files=`ls -1 ${frelout[$i]}/*`
3271	cd - > /dev/null
3272	(( inode = 0 ))
3273	(( tp1 = tasks_per_node + 1 ))
3274	while (( inode < nodes ))
3275	do
3276	files=`echo $all_files \| cut -d" " -f1-$tasks_per_node`
3277	all_files=`echo $all_files \| cut -d" " -f$tp1-`
3278	echo "tar cvf \$UT/${frelout[$i]}/${frelout[$i]}.node_$inode.tar $files" >> archive_${frelout[$i]}
3279	(( inode = inode + 1 ))
3280	done
3281	fi
3282	elif [[ $archive_system = none ]]
3283	then
3284	printf " +++ archiving on $localhost not available!\n"
3285	fi
3286
3287	if [[ $archive_system != none ]]
3288	then
3289	if [[ $localhost = ibmh \|\| $localhost = ibmb ]]
3290	then
3291	# subjob -d -v -q cdata -X 0 -m 1000 -t 43200 -c $job_catalog archive_${frelout[$i]}
3292	subjob -v -q cdata -X 0 -m 1000 -t 43200 -c $job_catalog archive_${frelout[$i]}
3293	elif [[ $localhost = nech ]]
3294	then
3295	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 7200 archive_${frelout[$i]}
3296	fi
3297	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
3298	fi
3299	else
3300	printf " +++ caution: option -A is switched on. No archiving on $archive_system!\n"
3301	fi
3302
3303
3304	# LEERDATEI IM BENUTZERVERZEICHNIS ANLEGEN, DAMIT BEKANNT IST,
3305	# WIE DIE HOECHSTE ZYKLUSNUMMER AUF DEM ARCHIV-SYSTEM LAUTET
3306	if [[ $files_for_pes = false ]]
3307	then
3308	cat /dev/null > ${pathout[$i]}
3309	else
3310	mkdir -p ${pathout[$i]}
3311	fi
3312
3313	fi
3314
3315
3316	# KOPIEREN AUF LOKALER MASCHINE ZUM ARCHIV-SYSTEM
3317	# AUSSERDEM MUSS LEERDATEI ANGELEGT WERDEN, DAMIT BEKANNT IST,
3318	# WIE DIE HOECHSTE ZYKLUSNUMMER AUF DEM ARCHIV-SYSTEM LAUTET
3319	# FALLS IRGENDEINE (VON MEHREREN) ARCHIVIERUNGEN SCHIEF GEHT,
3320	# WIRD FLAG GESETZT UND BLEIBT AUCH BEI WEITEREN ORDNUNGS-
3321	# GEMAESSEN ARCHIVIERUNGEN GESETZT
3322	if [[ "${actionout[$i]}" = ar ]]
3323	then
3324	if [[ $files_for_pes = false ]]
3325	then
3326	printf "\n >>> OUTPUT: ${localout[$i]} to"
3327	printf "\n ${pathout[$i]}"
3328	printf "\n File will be copied to archive-system ($archive_system) !\n"
3329	else
3330	printf "\n >>> OUTPUT: ${localout[$i]}/_.... to"
3331	printf "\n ${pathout[$i]}"
3332	printf "\n Directory will be copied to archive-system ($archive_system) !\n"
3333	fi
3334	mv ${localout[$i]} ${frelout[$i]}
3335
3336	file_saved=false
3337
3338	if [[ $archive_system = asterix ]]
3339	then
3340	do_stageout=true
3341	(( stageout_anz = 0 ))
3342	while [[ $do_stageout = true ]]
3343	do
3344	if [[ $files_for_pes = false ]]
3345	then
3346	stageout ${frelout[$i]} > STAGE_OUTPUT
3347	else
3348	stageout -t ${frelout[$i]} > STAGE_OUTPUT
3349	fi
3350	cat STAGE_OUTPUT
3351	if [[ $(grep -c "st.msg:150" STAGE_OUTPUT) != 0 ]]
3352	then
3353	file_saved=true
3354	do_stageout=false
3355	else
3356	if [[ $files_for_pes = false ]]
3357	then
3358	printf "\n +++ file ${frelout[$i]} could not be saved on archive-system"
3359	else
3360	printf "\n +++ directory ${frelout[$i]} could not be saved on archive-system"
3361	fi
3362	(( stageout_anz = stageout_anz + 1 ))
3363	if (( stageout_anz == 10 ))
3364	then
3365	printf "\n +++ stoped after 10 unsuccessful tries!"
3366	archive_save=false
3367	do_stageout=false
3368	else
3369	printf "\n *** new try to store on archive after 15 min:"
3370	sleep 900
3371	fi
3372	fi
3373	done
3374	elif [[ $archive_system = DMF ]]
3375	then
3376	if [[ $files_for_pes = false ]]
3377	then
3378	printf "\n +++ archiving of single files impossible on $archive_system!\n"
3379	locat=DMF
3380	exit
3381	else
3382	rm -rf $ARCHIVE/${frelout[$i]}
3383	cp -r ${frelout[$i]} $ARCHIVE
3384	fi
3385	file_saved=true
3386	elif [[ $archive_system = tivoli ]]
3387	then
3388	# ARCHIVIERUNG NUR PER BATCH-JOB MOEGLICH
3389	# DATEI MUSS ZWISCHENZEITLICH INS TEMPORAERE DATENVERZEICHNIS
3390	# GELEGT WERDEN
3391	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
3392	chmod g+rx $tmp_data_catalog
3393	if [[ $files_for_pes = false ]]
3394	then
3395	ln -f ${frelout[$i]} $tmp_data_catalog/${frelout[$i]}
3396	else
3397	mkdir $tmp_data_catalog/${frelout[$i]}
3398	ln -f ${frelout[$i]}/* $tmp_data_catalog/${frelout[$i]}
3399	fi
3400
3401	# BATCH JOB GENERIEREN UND ABSCHICKEN; DATEI MUSS WIEDER
3402	# AUS TEMPORAEREM DATENVERZEICHNIS ENTFERNT WERDEN
3403	echo "cd $tmp_data_catalog" > archive_${frelout[$i]}
3404	if [[ $files_for_pes = false ]]
3405	then
3406	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3407	echo "rm -rf \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3408	echo "cp ${frelout[$i]} \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3409	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3410	else
3411	echo "rm -rf \$PERM/${frelout[$i]}.tar" >> archive_${frelout[$i]}
3412	echo "tar cvf \$PERM/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
3413	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3414	fi
3415
3416	subjob -v -d -q cdata -X 0 -m 1000 -t 43200 -c $job_catalog archive_${frelout[$i]}
3417	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
3418	file_saved=true
3419
3420	elif [[ $archive_system = ut ]]
3421	then
3422	# ARCHIVIERUNG NUR PER BATCH-JOB MOEGLICH
3423	# DATEI MUSS ZWISCHENZEITLICH INS TEMPORAERE DATENVERZEICHNIS
3424	# GELEGT WERDEN
3425	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
3426	chmod g+rx $tmp_data_catalog
3427	if [[ $files_for_pes = false ]]
3428	then
3429	ln -f ${frelout[$i]} $tmp_data_catalog/${frelout[$i]}
3430	else
3431	mkdir $tmp_data_catalog/${frelout[$i]}
3432	ln -f ${frelout[$i]}/* $tmp_data_catalog/${frelout[$i]}
3433	fi
3434
3435	# BATCH JOB GENERIEREN UND ABSCHICKEN; DATEI MUSS WIEDER
3436	# AUS TEMPORAEREM DATENVERZEICHNIS ENTFERNT WERDEN
3437	echo "cd $tmp_data_catalog" > archive_${frelout[$i]}
3438	if [[ $files_for_pes = false ]]
3439	then
3440	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3441	echo "rm -rf \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3442	echo "cp ${frelout[$i]} \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3443	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3444	else
3445	echo "rm -rf \$UT/${frelout[$i]}.tar" >> archive_${frelout[$i]}
3446	echo "tar cvf \$UT/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
3447	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3448	fi
3449
3450	subjob -v -c /pf/b/$usern/job_queue -d -q pp -X 0 -m 1000 -t 7200 archive_${frelout[$i]}
3451	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
3452	file_saved=true
3453
3454	else
3455	printf "\n +++ archive_system=\"$archive_system\" archiving impossible!"
3456	archive_save=false
3457	fi
3458	if [[ $file_saved = true ]]
3459	then
3460	if [[ $files_for_pes = false ]]
3461	then
3462	cat /dev/null > ${pathout[$i]}
3463	else
3464	mkdir -p ${pathout[$i]}
3465	fi
3466	fi
3467	fi
3468
3469	# APPEND AUF LOKALER MASCHINE
3470	if [[ "${actionout[$i]}" = "a" ]]
3471	then
3472	printf "\n >>> OUTPUT: ${localout[$i]} append to ${pathout[$i]}\n"
3473	cat ${localout[$i]} >> ${pathout[$i]}
3474	fi
3475
3476	# KOPIEREN AUF LOKALER MASCHINE
3477	# ES MUSS KOPIERT WERDEN, DA MOVE NICHT UEBER FILESYSTEM HINAUS MOEGLICH
3478	if [[ "${actionout[$i]}" = "" && $files_for_pes = false ]]
3479	then
3480
3481	# KOPIEREN AUF EINPROZESSORMASCHINE
3482	if [[ "${extout[$i]}" != " " && "${extout[$i]}" != "" ]]
3483	then
3484	printf "\n >>> OUTPUT: ${localout[$i]} to ${pathout[$i]}.${extout[$i]}\n"
3485	if [[ $link_local_output = true ]]
3486	then
3487	printf " using ln -f\n"
3488	ln -f ${localout[$i]} ${pathout[$i]}.${extout[$i]}
3489	fi
3490	# If "ln -f" fails of if "$link_local_output = false" do a normal "cp"
3491	if [[ ! -f "${pathout[$i]}.${extout[$i]}" ]]
3492	then
3493	if [[ $link_local_output = true ]]
3494	then
3495	printf " ln failed, using cp...\n"
3496	fi
3497	cp ${localout[$i]} ${pathout[$i]}.${extout[$i]}
3498	fi
3499	else
3500	printf "\n >>> OUTPUT: ${localout[$i]} to ${pathout[$i]}\n"
3501	if [[ $link_local_output = true ]]
3502	then
3503	printf " using ln -f\n"
3504	ln -f ${localout[$i]} ${pathout[$i]}
3505	fi
3506	# If "ln -f" fails of if "$link_local_output = false" do a normal "cp"
3507	if [[ ! -f "${pathout[$i]}" ]]
3508	then
3509	if [[ $link_local_output = true ]]
3510	then
3511	printf " ln failed, using cp...\n"
3512	fi
3513	cp ${localout[$i]} ${pathout[$i]}
3514	fi
3515	fi
3516
3517	elif [[ "${actionout[$i]}" = "" && $files_for_pes = true ]]
3518	then
3519
3520	# DIE DEN PROZESSOREN EINES PARALLELRECHNERS ZUGEHOERIGEN
3521	# DATEIEN WERDEN ERST IN EINEM KATALOG GESAMMELT UND DIESER
3522	# WIRD DANN KOPIERT
3523	# PER MOVE UMBENANNT WERDEN
3524	printf "\n >>> OUTPUT: ${localout[$i]}/_.... to ${pathout[$i]}\n"
3525	if [[ $link_local_output = true ]]
3526	then
3527	printf " using ln -f\n"
3528	mkdir ${pathout[$i]}
3529	cd ${localout[$i]}
3530	for file in $(ls *)
3531	do
3532	ln -f $file ${pathout[$i]}
3533	done
3534	cd $TEMPDIR
3535	fi
3536	# If "ln -f" fails of if "$link_local_output = false" do a normal "cp -r"
3537	if [[ ! -f "${pathout[$i]}/_0000" ]]
3538	then
3539	if [[ $link_local_output = true ]]
3540	then
3541	printf " ln failed for .../_0000, using cp...\n"
3542	fi
3543	cp -r ${localout[$i]} ${pathout[$i]}
3544	fi
3545
3546	fi
3547	fi
3548	done
3549	if (( i != 0 ))
3550	then
3551	if [[ $transfer_problems = true ]]
3552	then
3553	printf "\n$striche\n *** OUTPUT-files saved"
3554	printf "\n +++ WARNING: some data transfers failed! \n"
3555	else
3556	printf "\n$striche\n *** all OUTPUT-files saved \n"
3557	fi
3558	fi
3559
3560
3561	# EVENTUELL FOLGEJOB STARTEN
3562	# DATEI CONTINUE_RUN MUSS VOM BENUTZERPROGRAMM AUS ERZEUGT WERDEN
3563	if [[ -f CONTINUE_RUN ]]
3564	then
3565
3566	if [[ $archive_save = true ]]
3567	then
3568
3569	# ZUERST IN MRUN-AUFRUF OPTIONEN FUER FORTSETZUNGSLAUF, FUER
3570	# STILLES ABARBEITEN (OHNE INTERAKTIVE RUECKFAGEN) UND FUER
3571	# BATCH-BETRIEB (NUR WICHTIG, FALLS BATCH AUF LOKALER MASCHINE
3572	# DURCHGEFUEHRT WERDEN SOLL) EINFUEGEN, FALLS NICHT BEREITS VOR-
3573	# HANDEN
3574	[[ $(echo $mc \| grep -c "\-C") = 0 ]] && mc="$mc -C"
3575	[[ $(echo $mc \| grep -c "\-v") = 0 ]] && mc="$mc -v"
3576	[[ $(echo $mc \| grep -c "\-b") = 0 ]] && mc="$mc -b"
3577	if [[ $(echo $mc \| grep -c "#") != 0 ]]
3578	then
3579	mc=`echo $mc \| sed 's/#/f/g'`
3580	fi
3581
3582
3583	# JOB STARTEN
3584	printf "\n\n *** initiating restart-run on \"$return_addres\" using command:\n"
3585	echo " $mc"
3586	printf "\n$striche\n"
3587	if [[ $localhost != $fromhost ]]
3588	then
3589
3590	if [[ $localhost = nech \|\| $localhost = ibmb \|\| $localhost = ibmh \|\| $localhost = ibms \|\| $localhost = lctit ]]
3591	then
3592	echo "*** ssh will be used to initiate restart-runs!"
3593	echo " return_addres=\"$return_addres\" "
3594	echo " return_username=\"$return_username\" "
3595	if [[ $return_addres = 172.20.25.41 ]]
3596	then
3597	# WORKAROUND AUF SCIROCCO AM TIT
3598	print "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc " \| ssh $return_addres -l $return_username
3599	else
3600	ssh $return_addres -l $return_username "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc "
3601	fi
3602	else
3603	printf "\n +++ no restart mechanism available for host \"$localhost\" "
3604	locat=restart; exit
3605	fi
3606
3607	# WARTEN, DAMIT SICH RESTART JOB IN QUEUE EINREIHEN KANN, BEVOR
3608	# DER AKTUELLE JOB ENDET
3609	sleep 30
3610
3611	else
3612
3613	# BEI RECHNUNGEN AUF LOKALER MASCHINE KANN MRUN DIREKT AUFGE-
3614	# RUFEN WERDEN, AUSSER AUF lcfimm
3615	cd $LOCAL_PWD
3616	if [[ $localhost = lcfimm ]]
3617	then
3618	ssh $return_addres -l $return_username "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc "
3619	else
3620	eval $mc # ' MUESSEN AUSGEWERTET WERDEN
3621	fi
3622	cd - > /dev/null
3623	fi
3624	printf "\n$striche\n *** restart-run initiated \n"
3625
3626
3627	# EVENTUELL INPUT-DATEIEN, DIE VON TEMPORAEREM DATENVERZEICHNIS
3628	# GEHOLT WORDEN SIND, LOESCHEN
3629	(( i = 0 ))
3630	while (( i < iin ))
3631	do
3632	(( i = i + 1 ))
3633	if [[ "${got_tmp[$i]}" = true && $keep_data_from_previous_run = false ]]
3634	then
3635	rm -r $tmp_data_catalog/${frelin[$i]}
3636	fi
3637	done
3638
3639	else
3640
3641	printf "\n +++ no restart-run possible, since errors occured"
3642	printf "\n during the archive process"
3643	fi
3644
3645	fi
3646
3647
3648
3649	# EVTL. EMAIL-BENACHRICHTIGUNG UEBER ABGESCHLOSSENEN LAUF
3650	if [[ "$email_notification" != "" ]]
3651	then
3652
3653	if [[ $localhost != $fromhost ]]
3654	then
3655	if [[ -f CONTINUE_RUN ]]
3656	then
3657	echo "PALM restart run necessary" > email_text
3658	echo "description header of actual run:" >> email_text
3659	cat CONTINUE_RUN >> email_text
3660	echo "mrun-command to restart:" >> email_text
3661	echo "$mc" >> email_text
3662	else
3663	echo "PALM run with base filename \"$fname\" on host \"$localhost\" finished" > email_text
3664	fi
3665	mail $email_notification < email_text
3666	printf "\n *** email notification sent to \"$email_notification\" "
3667	fi
3668	fi
3669
3670
3671
3672	# ALLE ARBEITEN BEENDET. TEMPORAERER KATALOG KANN GELOESCHT WERDEN
3673	cd $HOME
3674	[[ $delete_temporary_catalog = true ]] && rm -rf $TEMPDIR
3675
3676	else
3677
3678
3679	# FALLS AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL, WERDEN JETZT ENTSPRE-
3680	# CHENDE AKTIONEN DURCHGEFUEHRT
3681
3682	# MRUN-BEFEHL FUER REMOTE-MASCHINE ZUSAMMENSTELLEN
3683	mrun_com="$mrun_script_name -a $afname -c $config_file -d $fname -h $host -H $fromhost -m $memory -t $cpumax -q $queue -R $return_addres -U $return_username -u $remote_username"
3684	[[ "$cpp_opts" != "" ]] && mrun_com=${mrun_com}" -D \"$cpp_opts\""
3685	[[ "$global_revision" != "" ]] && mrun_com=${mrun_com}" -G \"$global_revision\""
3686	[[ $group_number != none ]] && mrun_com=${mrun_com}" -g $group_number"
3687	[[ $do_compile = true ]] && mrun_com=${mrun_com}" -s \"$source_list\""
3688	[[ "$input_list" != "" ]] && mrun_com=${mrun_com}" -i \"$input_list\""
3689	[[ $ignore_archive_error = true ]] && mrun_com=${mrun_com}" -I"
3690	[[ $keep_data_from_previous_run = true ]] && mrun_com=${mrun_com}" -k"
3691	[[ "$additional_conditions" != "" ]] && mrun_com=${mrun_com}" -K \"$additional_conditions\""
3692	# [[ "$makefile" != "$source_path/Makefile" ]] && mrun_com=${mrun_com}" -M \"$makefile\""
3693	[[ "$output_list" != "" ]] && mrun_com=${mrun_com}" -o \"$output_list\""
3694	[[ "$read_from_config" = false ]] && mrun_com=${mrun_com}" -S"
3695	[[ $do_trace = true ]] && mrun_com=${mrun_com}" -x"
3696	[[ "$numprocs" != "" ]] && mrun_com=${mrun_com}" -X $numprocs"
3697	if [[ $use_openmp = true ]]
3698	then
3699	mrun_com=${mrun_com}" -O"
3700	[[ "$tasks_per_node" != "" ]] && mrun_com=${mrun_com}" -T $threads_per_task"
3701	else
3702	[[ "$tasks_per_node" != "" ]] && mrun_com=${mrun_com}" -T $tasks_per_node"
3703	fi
3704	[[ $store_on_archive_system = false ]] && mrun_com=${mrun_com}" -A"
3705	[[ $package_list != "" ]] && mrun_com=${mrun_com}" -p \"$package_list\""
3706	[[ $return_password != "" ]] && mrun_com=${mrun_com}" -P $return_password"
3707	[[ $delete_temporary_catalog = false ]] && mrun_com=${mrun_com}" -B"
3708	[[ $node_usage != default && "$(echo $node_usage \| cut -c1-3)" != "sla" && $node_usage != novice ]] && mrun_com=${mrun_com}" -n $node_usage"
3709	[[ $run_coupled_model = true ]] && mrun_com=${mrun_com}" -Y"
3710	if [[ $do_remote = true ]]
3711	then
3712	printf "\n>>>> MRUN-command on execution host:\n>>>> $mrun_com \n"
3713	fi
3714
3715
3716	# ZUSAMMENSTELLUNG DES JOBSCRIPTS AUF DATEI jobfile
3717	jobfile=jobfile.$RANDOM
3718
3719
3720	# TEMPORAERES VERZEICHNIS GENERIEREN UND NACH DORT WECHSELN
3721	echo "mkdir $TEMPDIR" >> $jobfile
3722	echo "cd $TEMPDIR" >> $jobfile
3723
3724
3725	# EVENTUELL FEHLERVERFOLGUNG AKTIVIEREN
3726	if [[ $do_trace = true ]]
3727	then
3728	echo "set -x" >> $jobfile
3729	else
3730	echo "set +vx" >> $jobfile
3731	fi
3732
3733
3734	# ABSPEICHERN DER QUELLTEXTE (NUR FALLS UEBERSETZT WERDEN SOLL)
3735	# SOWIE GEGEBENENFALLS DES MAKEFILES
3736	if [[ $do_compile = true ]]
3737	then
3738
3739	source_catalog=SOURCES_FOR_RUN_$fname
3740
3741	# UNTERVERZEICHNIS FUER QUELLTEXTE UND MAKEFILE ANLEGEN
3742	# MRUN WIRD DIESES VRZEICHNIS UEBER ENVIRONMENT VARIABLE
3743	# MITGETEILT (UEBERSTEUERT ANGABE IN KONFIGURATIONSDATEI)
3744	echo "mkdir SOURCES_FOR_RUN_$fname" >> $jobfile
3745	echo "export SOURCES_COMPLETE=true" >> $jobfile
3746	echo "cd SOURCES_FOR_RUN_$fname" >> $jobfile
3747
3748	for filename in $source_list
3749	do
3750	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
3751	echo "cat > $filename << \"%END%\"" >> $jobfile
3752	cat $source_catalog/$filename >> $jobfile
3753	echo " " >> $jobfile
3754	echo "%END%" >> $jobfile
3755	echo " " >> $jobfile
3756	done
3757
3758	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
3759	echo "cat > Makefile << \"%END%\"" >> $jobfile
3760	cat $source_catalog/Makefile >> $jobfile
3761	echo " " >> $jobfile
3762	echo "%END%" >> $jobfile
3763	echo " " >> $jobfile
3764
3765	echo "cd - > /dev/null" >> $jobfile
3766
3767	fi
3768
3769
3770	# ABSPEICHERN DER KONFIGURATIONSDATEI
3771	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
3772	echo "cat > $config_file << \"%END%\"" >> $jobfile
3773	cat $config_file >> $jobfile
3774	echo "%END%" >> $jobfile
3775	echo " " >> $jobfile
3776
3777
3778	# ABSPEICHERN DER AKTUELLEN MRUN-VERSION
3779	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
3780	echo "cat > $mrun_script_name <<\"%END%\"" >> $jobfile
3781	cat ${PALM_BIN}/$mrun_script_name >> $jobfile
3782	echo "%END%" >> $jobfile
3783	if [[ $host = lctit ]]
3784	then
3785	echo "sed 's/bin\/ksh/home2\/usr5\/mkanda\/pub\/ksh/' < $mrun_script_name > mrun_new" >> $jobfile
3786	echo "mv mrun_new $mrun_script_name" >> $jobfile
3787	fi
3788	echo "chmod u+x $mrun_script_name" >> $jobfile
3789	echo "execute_mrun=true" >> $jobfile
3790	echo " " >> $jobfile
3791
3792	# EVTL. BENOETIGTE INPUT-DATEIEN PER FTP HOLEN ODER DEM JOB DIREKT
3793	# MITGEBEN UND AUF DEM REMOTE-RECHNER IM BENUTZERVERZEICHNIS ABLEGEN
3794	# FALLS DIESES NICHT EXISTIERT, WIRD VERSUCHT, DAS JEWEILS LETZTE
3795	# UNTERVERZEICHNIS DES PFADNAMENS ANZULEGEN
3796	if [[ $do_remote = true ]]
3797	then
3798	(( i = 0 ))
3799	while (( i < iin ))
3800	do
3801	(( i = i + 1 ))
3802	echo "[[ ! -d ${pathin[$i]} ]] && mkdir -p ${pathin[$i]}" >> $jobfile
3803	if [[ "${transin[$i]}" = job ]]
3804	then
3805	echo "cat > ${remotepathin[$i]} <<\"%END%\"" >> $jobfile
3806	eval cat ${pathin[$i]}/${frelin[$i]} >> $jobfile
3807	echo " " >> $jobfile
3808	echo "%END%" >> $jobfile
3809	else
3810	echo "batch_scp -b -o -g -s -u $return_username $return_addres ${remotepathin[$i]} \"${pathin[$i]}\" ${frelin[$i]}" >> $jobfile
3811	fi
3812
3813	# UEBERPRUEFEN, OB DATEI ANGELEGT WERDEN KONNTE
3814	echo "if [[ \$? = 1 ]]" >> $jobfile
3815	echo "then" >> $jobfile
3816	echo " echo \" \" " >> $jobfile
3817	echo " echo \"+++ file ${remotepathin[$i]} could not be created\" " >> $jobfile
3818	echo " echo \" please check, if directory exists on $host!\" " >> $jobfile
3819	echo " echo \"+++ MRUN will not be continued\" " >> $jobfile
3820	echo " execute_mrun=false" >> $jobfile
3821	echo "fi" >> $jobfile
3822	done
3823	fi
3824
3825	# ARBEITSKATALOG AUF DER LOKALEN MASCHINE FUER EVENTUELLE
3826	# FORTSETZUNGSLAUEFE PER ENV-VARIABLE UEBERGEBEN
3827	echo "LOCAL_PWD=$working_directory" >> $jobfile
3828	echo "export LOCAL_PWD" >> $jobfile
3829
3830	# EBENSO LOKALEN MRUN-KATALOG UEBERGEBEN
3831	echo "LOCAL_MRUN_PATH=$PALM_BIN" >> $jobfile
3832	echo "export LOCAL_MRUN_PATH" >> $jobfile
3833
3834	# WORKAROUND FUER RIAM-NEC-JOBS WEGEN PROFILE-SCHWIERIGKEITEN
3835	if [[ $localhost_realname = "gate" \|\| $localhost = lctit ]]
3836	then
3837	echo "export PALM_BIN=$PALM_BIN" >> $jobfile
3838	fi
3839
3840	# MRUN AUF ZIELRECHNER AUFRUFEN
3841	echo "set -x" >> $jobfile
3842	echo "[[ \$execute_mrun = true ]] && ./$mrun_com" >> $jobfile
3843
3844	echo 'ls -al; echo `pwd`' >> $jobfile
3845	echo "cd \$HOME" >> $jobfile
3846	echo "rm -rf $TEMPDIR" >> $jobfile
3847
3848
3849
3850
3851	# JOB PER SUBJOB STARTEN
3852	if [[ $silent = false ]]
3853	then
3854	printf "\n "
3855	else
3856	printf "\n\n"
3857	fi
3858
3859	subjob $job_on_file -h $host -u $remote_username -g $group_number -q $queue -m $memory -N $node_usage -t $cpumax $XOPT $TOPT $OOPT -n $fname -v -c $job_catalog $jobfile
3860	rm -rf $jobfile
3861
3862
3863	fi # ENDE REMOTE-TEIL
3864
3865
3866
3867	# ENDE DER PROZEDUR

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