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source: palm/trunk/SCRIPTS/mrun @ 181

Last change on this file since 181 was 181, checked in by raasch, 16 years ago
bugfixes + adjustments for SGI ICE system
Property svn:keywords set to `Id`
File size: 144.4 KB

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1	#!/bin/ksh
2	# mrun - Plot-Shellskript
3	# $Id: mrun 181 2008-07-30 07:07:47Z raasch $
4
5	# Prozedur zum Starten von Modellaeufen
6
7	# letzte Aenderung:
8	# 03/03/94 - Siggi - Entwicklungsbeginn
9	# 21/03/94 - Siggi - Entwicklungsabschluss (Version 1.0)
10	# 09/12/94 - Siggi - allexport unterbunden; statt dessen werden jetzt ein-
11	# zelne Variable exportiert. Dies ist noetig, weil an-
12	# sonsten irgendein Speicher ueberlaeuft und von mrun
13	# aufgerufene Programme (z.B. stageout) mit Fehlern
14	# abbrechen (too many arguments)
15	# 20/06/95 - Siggi - noclobber muss explizit abgeschaltet, da jetzt
16	# defaultmaessig im RRZN-Profile eingeschaltet
17	# 10/06/97 - Siggi - Zusaetzliche Option -C bei cpp, damit // nicht
18	# wegfallen
19	# 25/04/00 - Siggi - Version 1.5
20	# remote_addres und remote_user in return_addres bzw.
21	# return_username umbenannt, return_username wird dem
22	# mrun-Aufruf im Job ueber Option -U mitgegeben.
23	# Neue Variable remote_username, die beim interaktiven
24	# mrun-Aufruf zwingend ueber die neue Option -u oder
25	# in der Konfigurationsdatei angegeben werden muss.
26	# 08/02/01 - Siggi - Alle mrun-Meldungen ins englische uebersetzt,
27	# Version 1.7
28	# 05/05/02 - Siggi - Uebersetzungen mittels make-Mechanismus moeglich
29	# 21/11/02 - Siggi - ENV-Variable XLFRTEOPTS wird vor Ausfuehrung auf
30	# IBM gesetzt, um Record-Laenge der NAMELIST-Dateien,
31	# zu bestimmen; Praeprozessoroptionen haben nun alle
32	# die Form -Dtext=text, weil auf IBM sonst text durch
33	# die leere Zeichenkette ersetzt wird
34	# 01/08/03 - Siggi - Test of implementing dvrp+1PE on ibm
35	# 07/01/04 - Siggi - additional preprocessor directive for ibm included
36	# (-D$OMP=OMP) in order to avoid problems with
37	# OMP_NUM_THREADS
38	# 04/01/05 - Siggi - archiving on hanni and berni is done in separate
39	# tar files, one for each node used
40	# 07/01/04 - Siggi - old code for t3e, vpp and hpcs eliminated
41	# 09/01/05 - Siggi - workaround for getting the IP address on gfdl3
42	# 17/01/05 - Siggi - job for data transfer to local machine now within
43	# job class c1 (HLRN)
44	# 27/01/05 - Siggi - IP address workaround for gfdl3 removed
45	# 28/01/05 - Siggi - tar-filenames on $PERM (HLRN) now include the
46	# base filename and cycle number
47	# 16/02/05 - Gerald - hababai validated
48	# 14/03/05 - Siggi - abort on NEC after first runtime error (F_ERRCNT)
49	# 29/03/05 - Marcus - berni*-en0 validated
50	# 21/04/05 - Siggi - transfer-job-protocol for avs-data is no more stored
51	# 24/04/05 - Siggi - netcdf support on lcmuk
52	# 25/04/05 - Siggi - netcdf support on gfld3 (decalpha)
53	# 11/05/05 - Siggi - files with non-numeric extensions (.xxx after cycle
54	# number) can now be used within interactive runs
55	# 12/05/05 - Siggi - netcdf support on ibm
56	# 13/05/05 - Siggi - error in tar-filenames on $PERM (HLRN) removed
57	# 18/05/05 - Siggi - netcdf support on nec
58	# 24/05/05 - Siggi - netcdf support on ibms
59	# 14/06/05 - Siggi - sleep interval after submit of restart job increased
60	# to 30 seconds
61	# 28/06/05 - Siggi - bora adjusted to new intel compiler (LD_LIBRARY_
62	# PATH is temporarily set)
63	# 07/09/05 - Siggi - setting of MP_EAGER_LIMIT switched off because it
64	# caused warnings in the job protocol
65	# 20/10/05 - Siggi - update of netcdf-version on decalpha (gfdl3)
66	# 25/10/05 - Siggi - error in listing files for getting the cycle number
67	# removed
68	# 26/10/05 - Siggi - new paths for dvrp-library, transfer of catalogs
69	# realized by file attribute trpe
70	# 28/10/05 - Siggi - if existing, the file extension is output in case
71	# of missing input file - no job abort in case of
72	# missing input files with file extensions
73	# (preliminary solution)
74	# 31/10/05 - Siggi - data transfer from nech now within seperate job
75	# 04/11/05 - Siggi - netcdf 3.6.0-p1 on ibmh/ibmb
76	# 07/12/05 - Siggi - gallego and elephanta admitted
77	# 30/12/05 - Siggi - gfdl5 (ibmy) admitted
78	# 10/01/06 - Siggi - cpp directive for NetCDF 64bit support
79	# 20/01/06 - Siggi - cpp directive for ibmy
80	# 09/02/06 - Siggi - ibmy admitted for batch mode
81	# 13/04/06 - Siggi - ostria admitted
82	# 18/04/06 - Siggi - usage of OpenMP implemented (additional option -O)
83	# 10/05/06 - Siggi - environment variable XLSMPOPTS set on IBM for
84	# optimization of OpenMP runs (option stacksize is
85	# necessary for large gridpoint numbers because
86	# otherwise a segmentation fault occurs)
87	# 23/05/05 - Siggi - lctit (SUN Fire X4600) admitted
88	# 21/08/06 - Siggi - standard mrun path on scirocco is as on bora
89	# 23/08/06 - Siggi - netcdf support for scirocco (notebook)
90	# 20/09/06 - Marcus - add DVRP library on nech
91	# 24/10/06 - Siggi - Environment variables for PALM steering are written
92	# on local NAMELIST file ENVPAR
93	# 24/11/06 - Siggi - levanto admitted, maestro switched to ifc 9.1
94	# 28/11/06 - Siggi - call to interpret_config.x_levanto because of SuSe 10
95	# 06/02/07 - Siggi - add DVRP library on lcmuk
96	# 07/02/07 - Siggi - revision of source code handling, source code is
97	# now expected in directory given by source_path and
98	# not in the current working directory, source code
99	# files provided in add_source_path are allways
100	# compiled, source code to be compiled is allways
101	# sampled in SOURCES_FOR_RUN_$fname which is a
102	# subdirectory of the current working directory,
103	# -s TEST changed to -s WRITE_PERMIT or -s WP,
104	# adapted for RIAM (neck)
105	# bugfix for cycle number of output file (extout)
106	# all hpmuk-related code removed
107	# 14/02/07 - Siggi - dvrp support for neck added
108	# 28/02/07 - Siggi - empty lines in configuration file are accepted
109	# mrun_path replaced by PALM_BIN,
110	# all machines are calling interpret_config.x
111	# 14/03/07 - Siggi - fimm admitted, revision number added to terminal
112	# output
113	# 16/03/07 - Siggi - adjustments for lctit
114	# 29/03/07 - Siggi - global revision transfered to batch job by new
115	# option -G
116	# 30/03/07 - Siggi - compilation "by hand" removed, cpp-directives/options
117	# + netcdf/dvrp-options are read from configuration
118	# file, host identifier (local_host) is read from
119	# config file, code related to ftp filetransfer
120	# removed (incl. option -f)
121	# 19/06/07 - Siggi - time limit for cdata jobs increased
122	# 25/07/07 - Siggi - two sets of executables can be started on lcmuk,
123	# if new option -Y (coupling) is given,
124	# output of executables to aout_output removed,
125	# messages are immediately written to stdout instead
126	# 03/08/07 - Marcus - add XOPT="-X $numprocs" for lcfimm
127	# 09/08/07 - Marcus - workaround on lcfimm to propagate environment
128	# variables out to the nodes in coupled mode -disabled-
129	# 13/08/07 - Marcus - start local restart jobs per ssh on lcfimm
130	# 28/08/07 - Marcus - completely remove workaround on lcfimm to propagate
131	# environment variables out to the nodes in coupled mode
132	# 15/10/07 - Siggi - Preliminary adjustments for lctit, based on Jin's
133	# suggestions
134	# 19/10/07 - Marcus - further adjustments for lctit: add new optional
135	# argument -g group_number, admit all sla* node_usage
136	# queues
137	# 30/10/07 - Marcus - further adjustments for queues on lctit
138	# 14/02/08 - Bjoern - link of restart files with long file name possible
139	# 28/02/08 - Marcus - If environment variable link_local_output is set to
140	# true, mrun tries "ln -f" on local output and resorts
141	# to "cp" or "cp -r" on error
142	# 15/04/08 - Siggi - argument -c introduced to most of the subjob calls,
143	# which allows the user to choose his own job catalog
144	# by setting job_catalog in the configuration file
145	# (default is ~/job_queue),
146	# workaround for mpiexec with -env option,
147	# adjustments for lcxt4 (Bergen Center for Computational
148	# Science)
149	# 27/05/08 - Siggi - PATH is set to PALM_BIN everywhere (missing so far)
150	# 14/07/08 - Siggi - adjustments for lcsgih
151
152
153	# VARIABLENVEREINBARUNGEN + DEFAULTWERTE
154
155	set +o allexport # SICHERHEITSHALBER UNTERBINDEN, DA SONST EVTL. STAGEOUT
156	# NICHT LAUEFT (TOO MANY ARGUMENTS - PROBLEM)
157	set +o noclobber # EXISTIERENDE DATEIEN DUERFEN UEBERSCHRIEBEN WERDEN
158
159	AddFilenames=""
160	additional_conditions=""
161	add_source_path=""
162	afname=""
163	archive_save=true
164	archive_system=none
165	compiler_name=""
166	cond1=""
167	cond2=""
168	config_file=.mrun.config
169	cpp_opts=""
170	cpp_options=""
171	cpumax=0
172	cpurest=0
173	delete_temporary_catalog=true
174	do_batch=false
175	do_compile=true
176	do_remote=false
177	do_stagein=true
178	do_stageout=true
179	do_trace=false
180	email_notification=""
181	exclude=""
182	executable=""
183	execution_error=false
184	fimm=false
185	fname=test
186	fromhost=""
187	global_revision=""
188	group_number=none
189	host=""
190	host_file=""
191	hp=""
192	ignore_archive_error=false
193	input_list=""
194	interpreted_config_file=""
195	job_catalog="~/job_queue"
196	job_on_file=""
197	keep_data_from_previous_run=false
198	link_local_output=false
199	localhost_realname=$(hostname)
200	local_compile=false
201	locat=normal
202	mainprog=""
203	makefile=""
204	mc=$0
205	while [[ $(echo $mc \| grep -c "/") != 0 ]]
206	do
207	mc=`echo $mc \| cut -f2- -d"/"`
208	done
209	module_files=""
210	mrun_script_name=$mc
211	netcdf_inc=""
212	netcdf_lib=""
213	netcdf_support=false
214	node_usage=default
215	numprocs=""
216	OOPT=""
217	openmp=false
218	output_list=""
219	package_list=""
220	punkte="..........................................................."
221	queue=none
222	read_from_config=""
223	restart_run=false
224	return_addres=$(nslookup `hostname` 2>&1 \| grep "Address:" \| tail -1 \| awk '{print $2}')
225	if [[ $return_addres = 130.75.105.158 ]]
226	then
227	return_addres=172.20.25.41
228	echo "+++ WARNING: return_addres changed to $return_addres !!!!!"
229	fi
230	# if [[ $return_addres = 210.117.65.1 ]]
231	# if [[ $(nslookup `hostname` 2>&1 \| grep -c 210.117.65.1) = 1 ]]
232	# then
233	# [[ $localhost_realname = gfdl3.yonsei.ac.kr ]] && return_addres=165.132.26.56
234	# fi
235	return_password=""
236	return_username=$LOGNAME
237	remotecall=false
238	remote_username=""
239	run_coupled_model=false
240	run_mode=""
241	scirocco=false
242	store_on_archive_system=true
243	striche=" ----------------------------------------------------------------------------"
244	silent=false
245	source_list=""
246	source_path=SOURCE
247	tasks_per_node=""
248	threads_per_task=1
249	tmpcreate=false
250	tmp_data_catalog=""
251	transfer_problems=false
252	usern=$LOGNAME
253	working_directory=`pwd`
254	TOPT=""
255	XOPT=""
256	zeit=$( date \| cut -c 12-19 )
257
258	typeset -i iec=0 iic=0 iin=0 ioc=0 iout=0 memory=0 stagein_anz=0 stageout_anz=0
259	typeset -i cputime i ii iii icycle inode ival jobges jobsek maxcycle minuten nodes pes sekunden tp1
260
261	typeset -R30 calltime
262	typeset -L20 spalte1
263	typeset -L40 spalte2
264	typeset -L60 spalte3
265	typeset -L35 string1=`date`
266	typeset -L12 string2=$usern
267	typeset -L12 string3=$localhost_realname
268	typeset -L12 string4
269	typeset -L12 string5
270	typeset -L30 version="MRUN 2.0 Rev$Rev: 164 $"
271
272
273
274	# EINZELNE VARIABLE FUER HAUPTPROGRAMM EXPORTIEREN
275	export cpurest fname host localhost return_addres return_username remotecall tasks_per_node
276
277	# FOLGENDE VARIABLEN MUESSEN FUER DIE INTERPRETATION DER KONFIGURATIONSDATEI
278	# EXPORTIERT WERDEN
279	export afname config_file cpp_opts cpumax do_batch do_trace fname fromhost
280	export group_number input_list memory numprocs output_list queue run_mode
281
282
283
284	# FEHLERBEHANDLUNG
285	# BEI EXIT:
286	trap 'rm -rf $working_directory/tmp_mrun
287	if [[ $locat != localhost ]]
288	then
289	# if [[ ! -f ${mrun_path}/statistik/mrun_statistik ]]
290	# then
291	# cat > ${mrun_path}/statistik/mrun_statistik << %STATEND%
292	#MRUN-calls on $localhost
293	#
294	#date and time user localhost remotehost termination mrun-command
295	#--------------------------------------------------------------------------------------------------------------------
296	#%STATEND%
297	# chmod 666 ${mrun_path}/statistik/mrun_statistik
298	# fi
299	#
300	# # EINTRAG IN DIE STATISTIK-DATEI
301	# string4=$host
302	# string5=$locat
303	# if [[ "$job_on_file" = "" && $locat != control_c && $locat != user_abort ]]
304	# then
305	# if [[ $do_batch = true ]]
306	# then
307	# printf "$string1$string2$string3$string4$string5$mrun_com \n" >> ${mrun_path}/statistik/mrun_statistik
308	# else
309	# printf "$string1$string2$string3$string4$string5$mc \n" >> ${mrun_path}/statistik/mrun_statistik
310	# fi
311	# fi
312	echo " " > /dev/null
313	fi
314
315	if [[ $locat != normal && $locat != control_c && $locat != local_compile ]]
316	then
317
318	# EVENTUELLE ERROR-KOMMANDOS ABARBEITEN
319	(( i = 0 ))
320	while (( i < iec ))
321	do
322	(( i = i + 1 ))
323	printf "\n *** Execution of ERROR-command:\n"
324	printf " >>> ${err_command[$i]}\n"
325	eval ${err_command[$i]}
326	done
327	if [[ -n $interpreted_config_file ]] then
328	rm -rf $interpreted_config_file
329	fi
330	if [[ -n .mrun_environment ]] then
331	rm -rf .mrun_environment
332	fi
333	if [[ $tmpcreate = true ]]
334	then
335	printf "\n *** Contents of \"$TEMPDIR\":\n"
336	ls -al; cd
337	[[ $delete_temporary_catalog = true ]] && rm -rf $TEMPDIR
338	fi
339	if [[ -f ~/job_queue/JOBINFO.$QSUB_REQID ]]
340	then
341	rm -rf ~/job_queue/JOBINFO.$QSUB_REQID
342	fi
343	printf "\n\n+++ MRUN killed \n\n"
344	elif [[ $locat != control_c ]]
345	then
346	printf "\n\n --> all actions finished\n\n"
347	printf " Bye, bye $usern !!\n\n"
348	fi' exit
349
350
351	# BEI TERMINAL-BREAK:
352	trap 'rm -rf $working_directory/tmp_mrun
353	[[ $tmpcreate = true ]] && (cd; rm -rf $TEMPDIR)
354	if [[ -f ~/job_queue/JOBINFO.$QSUB_REQID ]]
355	then
356	rm -rf ~/job_queue/JOBINFO.$QSUB_REQID
357	fi
358	printf "\n+++ MRUN killed by \"^C\" \n\n"
359	locat=control_c
360	exit
361	' 2
362
363
364	# CHECK IF THE PATH FOR THE PALM BINARIES (SCRIPTS+UTILITY-PROGRAMS) HAS
365	# BEEN SET
366	if [[ "$PALM_BIN" = "" ]]
367	then
368	printf "\n +++ environment variable PALM_BIN has not been set"
369	printf "\n please set it to the directory where the PALM scripts are located"
370	locat=palm_bin; exit
371	fi
372	export PATH=$PALM_BIN:$PATH
373
374
375
376	# SHELLSCRIPT-OPTIONEN EINLESEN UND KOMMANDO NEU ZUSAMMENSETZEN, FALLS ES
377	# FUER FOLGEJOBS BENOETIGT WIRD
378	while getopts :a:AbBc:Cd:D:Fg:G:h:H:i:IkK:m:M:n:o:Op:P:q:r:R:s:St:T:u:U:vxX:Y option
379	do
380	case $option in
381	(a) afname=$OPTARG;;
382	(A) store_on_archive_system=false; mc="$mc -A";;
383	(b) do_batch=true; mc="$mc -b";;
384	(B) delete_temporary_catalog=false; mc="$mc -B";;
385	(c) config_file=$OPTARG; mc="$mc -c$OPTARG";;
386	(C) restart_run=true; mc="$mc -C";;
387	(d) fname=$OPTARG; mc="$mc -d$OPTARG";;
388	(D) cpp_opts="$cpp_opts $OPTARG"; mc="$mc -D$OPTARG";;
389	(F) job_on_file="-D"; mc="$mc -F";;
390	(g) group_number=$OPTARG; mc="$mc -g$OPTARG";;
391	(G) global_revision=$OPTARG; mc="$mc -G'$OPTARG'";;
392	(h) host=$OPTARG; mc="$mc -h$OPTARG";;
393	(H) fromhost=$OPTARG; mc="$mc -H$OPTARG";;
394	(i) input_list=$OPTARG; mc="$mc -i'$OPTARG'";;
395	(I) ignore_archive_error=true; mc="$mc -I";;
396	(k) keep_data_from_previous_run=true; mc="$mc -k";;
397	(K) additional_conditions="$OPTARG"; mc="$mc -K$OPTARG";;
398	(m) memory=$OPTARG; mc="$mc -m$OPTARG";;
399	(M) makefile=$OPTARG; mc="$mc -M$OPTARG";;
400	(n) node_usage=$OPTARG; mc="$mc -n$OPTARG";;
401	(o) output_list=$OPTARG; mc="$mc -o'$OPTARG'";;
402	(O) use_openmp=true; mc="$mc -O";;
403	(p) package_list=$OPTARG; mc="$mc -p'$OPTARG'";;
404	(P) return_password=$OPTARG; mc="$mc -P$OPTARG";;
405	(q) queue=$OPTARG; mc="$mc -q$OPTARG";;
406	(r) run_mode=$OPTARG; mc="$mc -r'$OPTARG'";;
407	(R) remotecall=true;return_addres=$OPTARG; mc="$mc -R$OPTARG";;
408	(s) source_list=$OPTARG; mc="$mc -s'$OPTARG'";;
409	(S) read_from_config=false; mc="$mc -S";;
410	(t) cpumax=$OPTARG; mc="$mc -t$OPTARG";;
411	(T) tasks_per_node=$OPTARG; mc="$mc -T$OPTARG";;
412	(u) remote_username=$OPTARG; mc="$mc -u$OPTARG";;
413	(U) return_username=$OPTARG; mc="$mc -U$OPTARG";;
414	(v) silent=true; mc="$mc -v";;
415	(x) do_trace=true;set -x; mc="$mc -x";;
416	(X) numprocs=$OPTARG; mc="$mc -X$OPTARG";;
417	(Y) run_coupled_model=true; mc="$mc -Y";;
418	(\?) printf "\n +++ unknown option $OPTARG \n"
419	printf "\n --> type \"$0 ?\" for available options \n"
420	locat=parameter;exit;;
421	esac
422	done
423
424
425	# EVTL. POSITIONSPARAMETER EINLESEN
426	# ZUR ZEIT GIBT ES NUR DEN PARAMETER ? (=KURZINFO)
427	shift OPTIND-1
428
429
430	# KURZE AUFRUFBESCHREIBUNG WIRD HIER AUSGEGEBEN
431	if [[ "$1" = "?" ]]
432	then
433	(printf "\n *** mrun can be called as follows:\n"
434	printf "\n $mrun_script_name -b -c.. -d.. -D.. -f.. -F -h.. -i.. -I -K.. -m.. -o.. -p.. -r.. -R -s.. -t.. -T.. -v -x -X.. <modus>\n"
435	printf "\n Description of available options:\n"
436	printf "\n Option Description Default-Value"
437	printf "\n -a base name of input files equiv. -d"
438	printf "\n -A no archiving when using file-attribute fl"
439	printf "\n -b batch-job on local machine ---"
440	printf "\n -B do not delete temporary directory at end ---"
441	printf "\n -c configuration file .mrun.config"
442	printf "\n -d base name of files attached to program test"
443	printf "\n -D preprocessor(cpp)-directives \"\" "
444	printf "\n -F create remote job file only ---"
445	printf "\n -h execution host $localhost_realname"
446	printf "\n -i INPUT control list \"\" "
447	printf "\n -I archiving errors of previous batch-jobs"
448	printf "\n will be ignored"
449	printf "\n -k keep data from previous run"
450	printf "\n -K additional conditions for controling"
451	printf "\n usage of conditional code and"
452	printf "\n env-variables in configuration file \"\" "
453	printf "\n -m memory demand in MB (batch-jobs) 0 MB"
454	printf "\n -M Makefile name Makefile"
455	printf "\n -n node usage (shared/not_shared) depending on -h"
456	printf "\n -o OUTPUT control list \"\" "
457	printf "\n -O use OpenMP ---"
458	printf "\n -p software package list \"\" "
459	printf "\n -q queue \"$queue\" "
460	printf "\n -r run control list (combines -i -o) \"\" "
461	printf "\n -s filenames of routines to be compiled \"\" "
462	printf "\n must end with .f, .f90, .F, or .c !"
463	printf "\n use \"..\" for more than one file and wildcards"
464	printf "\n -s TEST compiles all files with w-permit"
465	printf "\n -S config file interpreted by shellscript ---"
466	printf "\n -t allowed cpu-time in seconds (batch) 0"
467	printf "\n -T tasks per node depending on -h"
468	printf "\n -u username on remote machine \"\" "
469	printf "\n -v no prompt for confirmation ---"
470	printf "\n -x tracing of mrun for debug purposes ---"
471	printf "\n -X # of processors (on parallel machines) 1"
472	printf "\n -Y run coupled model ---"
473	printf "\n "
474	printf "\n Possible values of positional parameter <modus>:"
475	printf "\n \"?\" - this outline \n\n") \| more
476	exit
477	elif [[ "$1" != "" ]]
478	then
479	printf "\n +++ positional parameter $1 unknown \n"
480	locat=parameter; exit
481	fi
482
483
484
485	# KURZE STARTMELDUNG
486	printf "\n*** $version "
487	printf "\n will be executed. Please wait ..."
488
489
490
491	# PRUEFEN, OB KONFIGURATIONS-DATEI VORHANDEN
492	if [[ ! -f $config_file ]]
493	then
494	printf "\n\n +++ configuration file: "
495	printf "\n $config_file"
496	printf "\n does not exist"
497	locat=connect; exit
498	fi
499
500
501	# HOST-IDENTIFIER (local_host) AUS KONFIGURATIONSDATEI BESTIMMEN
502	line=""
503	grep "%host_identifier" $config_file > tmp_mrun
504	while read line
505	do
506	if [[ "$line" != "" \|\| $(echo $line \| cut -c1) != "#" ]]
507	then
508	HOSTNAME=`echo $line \| cut -d" " -s -f2`
509	host_identifier=`echo $line \| cut -d" " -s -f3`
510	if [[ $localhost_realname = $HOSTNAME ]]
511	then
512	localhost=$host_identifier
513	break
514	fi
515	fi
516	done < tmp_mrun
517
518	if [[ "$localhost" = "" ]]
519	then
520	printf "\n\n +++ no host identifier found in configuration file \"$config_file\""
521	printf "\n for local host \"$localhost_realname\"."
522	printf "\n Please add line"
523	printf "\n \"\%host_identifier $localhost_realname <identifier>\""
524	printf "\n to the configuration file."
525	locat=localhost; exit
526	fi
527
528
529
530	# HOSTSPEZIFISCHE VARIABLEN SETZEN
531	case $localhost_realname in
532	(breg-en0\|berni-en0) archive_system=tivoli;;
533	(cs*) archive_system=ut;;
534	(fimm.bccs.uib.no) fimm=true;;
535	(gate\|n-sx) PATH=$PALM_BIN:$PATH:/usr/bin/nqsII;;
536	(hreg-en0\|hanni-en0) archive_system=tivoli;;
537	(scirocco) scirocco=true;;
538	esac
539
540
541
542	# BASISNAME DER INPUT-DATEIEN GLEICH ALLGEMEINEM BASISNAMEN SETZEN,
543	# WENN NICHT VOM BENUTZER ANDERS BESTIMMT
544	[[ "$afname" = "" ]] && afname=$fname
545
546
547	# EVTL. RUN-MODUS DEN I/O-LISTEN HINZUFUEGEN
548	if [[ "$run_mode" != "" ]]
549	then
550	input_list="$input_list $run_mode"
551	output_list="$output_list $run_mode"
552	fi
553
554
555	# RECHNERNAMEN ABSPEICHERN, VON DEM AUS JOB GESTARTET WIRD,
556	# ALLERDINGS NUR DANN, WENN NICHT PER OPTION -H BEREITS EIN WERT
557	# ZUGEWIESEN WURDE (MRUN MACHT DIES IMMER, WENN ES SELBST BATCH-JOBS
558	# STARTET)
559	if [[ "$fromhost" = "" ]]
560	then
561	fromhost=$localhost
562	fi
563
564
565	# PRUEFEN, OB MRUN NUR TESTWEISE AUF DER LOKALEN MASCHINE KOMPILIEREN SOLL
566	if [[ "$source_list" = LOCAL_COMPILE_TEST ]]
567	then
568	source_list=TEST
569	local_compile=true
570	host=$localhost
571	fi
572
573
574	# PRUEFEN, OB AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL
575	# WERT VON do_remote WIRD FUER DATEIVERBINDUNGEN BENOETIGT.
576	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
577	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
578	if [[ -n $host && "$host" != $localhost ]]
579	then
580	do_batch=true
581	do_remote=true
582	case $host in
583	(ibm\|ibmb\|ibmh\|ibms\|ibmy\|nech\|neck\|lcsgib\|lcsgih\|lctit\|unics) true;;
584	(*) printf "\n"
585	printf "\n +++ sorry: execution of batch jobs on remote host \"$host\""
586	printf "\n is not available"
587	locat=nqs; (( iec = 0 )); exit;;
588	esac
589	else
590	host=$localhost
591	fi
592
593
594	# ZUSATZBEDINGUNGEN (OPTION -K) AUSWERTEN
595	if [[ -n $additional_conditions ]]
596	then
597	# echo $additional_conditions \| cut -d" " -f1-3 \| read cond1 cond2 dummy
598	cond1=`echo $additional_conditions \| cut -d" " -f1`
599	cond2=`echo $additional_conditions \| cut -d" " -s -f2`
600	dummy=`echo $additional_conditions \| cut -d" " -s -f3`
601	if [[ -n $dummy ]]
602	then
603	printf "\n +++ more than 2 additional conditions given for Option \"-K\""
604	locat=options; exit
605	fi
606	fi
607
608
609	# PRUEFEN, OB EVTL. BEI VORHERGEHENDEM LAUF (KETTENJOB) EINE
610	# ARCHIVIERUNG FEHLGESCHLAGEN IST
611	if [[ -f ~/job_queue/ARCHIVE_ERROR_$fname ]]
612	then
613	if [[ $ignore_archive_error = false ]]
614	then
615	printf "\n +++ data archiving of previous run failed"
616	printf "\n see directory \~/job_queue on remote machine"
617	locat=archive; exit
618	else
619	printf "\n +++ warning: data archiving in a previous run failed"
620	printf "\n MRUN continues, trying to get backup copy"
621	fi
622	fi
623
624
625
626	# LESEN UND INTERPRETIEREN DER KONFIGURATIONS-DATEI VOM SHELLSCRIPT AUS
627	# VORUEBERGEHEND ZWINGEND AUF LINUX-RECHNERN
628	if [[ "$read_from_config" = false ]]
629	then
630
631	[[ $silent = false ]] && printf "\n Reading the configuration file... "
632	while read zeile
633	do
634	[[ $silent = false ]] && printf "."
635
636
637	# ZUERST EVENTUELL VORKOMMENDE ENVIRONMENT-VARIABLEN DURCH IHRE WERTE
638	# ERSETZEN
639	eval zeile=\"$zeile\"
640
641
642	# INTERPRETATION DER ZEILE
643	if [[ "$(echo $zeile)" = "" ]]
644	then
645	# LEERZEILE, KEINE AKTION
646	continue
647
648	elif [[ "$(echo $zeile \| cut -c1)" = "#" ]]
649	then
650
651	# ZEILE IST KOMMENTARZEILE
652	true
653
654	elif [[ "$(echo $zeile \| cut -c1)" = "%" ]]
655	then
656
657	# ZEILE DEFINIERT ENVIRONMENT-VARIABLE
658	zeile=$(echo $zeile \| cut -c2-)
659	# echo $zeile \| cut -d" " -f1-5 \| read var value for_host for_cond1 for_cond2
660	var=`echo $zeile \| cut -d" " -f1`
661	value=`echo $zeile \| cut -d" " -s -f2`
662	for_host=`echo $zeile \| cut -d" " -s -f3`
663	for_cond1=`echo $zeile \| cut -d" " -s -f4`
664	for_cond2=`echo $zeile \| cut -d" " -s -f5`
665
666	if [[ "$for_host" = "" \|\| ( "$for_host" = $host && "$for_cond1" = "$cond1" && "$for_cond2" = "$cond2" ) \|\| $(echo "$input_list$output_list"\|grep -c "$for_host") != 0 ]]
667	then
668
669	# BEI COMPILER- CPP- ODER LINKEROPTIONEN EVTL ":" DURCH " "
670	# ERSETZEN. "::" WIRD DURCH ":" ERSETZT.
671	value=`echo $value \| sed 's/::/%DUM%/g' \| sed 's/:/ /g' \| sed 's/%DUM%/:/g'`
672
673
674	# ENVIRONMENT-VARIABLE WIRD WERT AUS KONFIGURATIONSDATEI
675	# ZUGEWIESEN, WENN SIE SELBST NOCH KEINEN WERT UEBER DIE
676	# ENTSPRECHENDE SCRIPT-OPTION ERHALTEN HAT. SOLCHE
677	# VARIABLEN HAETTEN DANN DEN WERT "" ODER IM INTEGER-FALL DEN
678	# WERT 0. ALLGEMEINE REGEL ALSO: SCRIPT-OPTION GEHT UEBER
679	# KONFIGURATIONSDATEI
680	if [[ "$(eval echo \$$var)" = "" \|\| "$(eval echo \$$var)" = "0" ]]
681	then
682	eval $var=\$value
683
684	# EVTL. BILDSCHIRMAUSGABEN DER ENVIRONMENT-VARIABLEN
685	if [[ $do_trace = true ]]
686	then
687	printf "\n*** ENVIRONMENT-VARIABLE $var = $value"
688	fi
689	fi
690
691	# WENN ENVIRONMENT-VARIABLE HOST VEREINBART, DANN SOFORT AUSWERTEN
692	# WERT VON do-remote WIRD BEI DATEIVERBINDUNGEN BENOETIGT
693	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
694	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
695	if [[ $var = host ]]
696	then
697	if [[ -n $host && "$host" != $localhost ]]
698	then
699	do_batch=true
700	do_remote=true
701	case $host in
702	(ibm\|ibms\|ibmy\|lcsgib\|lcsgih\|lctit\|nech\|neck\|unics) true;;
703	(*) printf "\n +++ sorry: execution of batch jobs on remote host \"$host\""
704	printf "\n is not available"
705	locat=nqs; exit;;
706	esac
707	else
708	host=$localhost
709	fi
710	fi
711
712	# VOM BENUTZER DEFINIERTE ENVIRONMENT VARIABLEN MUESSEN PRINZIPIELL
713	# EXPORTIERT WERDEN, DA SIE VIELLEICHT IN WEITER UNTEN AUFZURUFEN-
714	# DEN PROGRAMMEN BENOETIGT WERDEN
715	export $var
716	fi
717
718
719
720
721	elif [[ "$(echo $zeile \| cut -c1-3)" = "EC:" ]]
722	then
723
724	# ZEILE DEFINIERT ERROR-KOMMANDO
725	(( iec = iec + 1 ))
726	zeile=$(echo $zeile \| cut -c4-)
727	err_command[$iec]="$zeile"
728
729	elif [[ "$(echo $zeile \| cut -c1-3)" = "IC:" ]]
730	then
731
732	# ZEILE DEFINIERT INPUT-KOMMANDO
733	(( iic = iic + 1 ))
734	zeile=$(echo $zeile \| cut -c4-)
735	in_command[$iic]="$zeile"
736
737	elif [[ "$(echo $zeile \| cut -c1-3)" = "OC:" ]]
738	then
739
740	# ZEILE DEFINIERT OUTPUT-KOMMANDO
741	(( ioc = ioc + 1 ))
742	zeile=$(echo $zeile \| cut -c4-)
743	out_command[$ioc]="$zeile"
744
745	else
746
747	# ZEILE DEFINIERT DATEIVERBINDUNG. EINLESEN DER DATEIEIGENSCHAFTEN
748	# s2a: in/out - Feld
749	# s2b: loc - Feld (optional)
750	# s2c: tr/ar - Feld (optional)
751	# echo $zeile \| cut -d" " -f1-2 \| read s1 s2
752	s1=`echo $zeile \| cut -d" " -f1`
753	s2=`echo $zeile \| cut -d" " -s -f2`
754	s2a=$(echo $s2 \| cut -d":" -f1)
755	if [[ $(echo $s2 \| grep -c ":") = 0 ]]
756	then
757	s2b=""
758	s2c=""
759	else
760	# echo $s2 \| cut -d":" -f2-3 \| sed 's/:/ /g' \| read s2b s2c
761	s2b=`echo $s2 \| cut -d":" -f2 \| sed 's/:/ /g'`
762	s2c=`echo $s2 \| cut -d":" -s -f3 \| sed 's/:/ /g'`
763	fi
764	# echo $zeile \| cut -d" " -f3-6 \| read s3 s4 s5 s6
765	s3=`echo $zeile \| cut -d" " -f3`
766	s4=`echo $zeile \| cut -d" " -s -f4`
767	s5=`echo $zeile \| cut -d" " -s -f5`
768	s6=`echo $zeile \| cut -d" " -s -f6`
769
770
771	# ABSPEICHERN DER DATEIVERBINDUNG, FALLS IN INPUT- ODER OUTPUT-LIST
772	# VERMERKT. VARIABLE S3 KANN AUCH LISTE ENTHALTEN (FELDTRENNER ":")
773	# DATEIVERBINDUNG WIRD DANN NICHT ABGESPEICHERT UND GEPRUEFT, WENN
774	# PROGRAMMLAUF AUF REMOTE-MASCHINE ERFOLGT UND DATEI NUR LOKAL VOR-
775	# HANDEN SEIN MUSS (D.H. s2b = loc)
776	IFSALT="$IFS"; IFS="$IFS:"
777	if [[ "$s2a" = in && ! ( $do_remote = true && ( "$s2b" = loc \|\| "$s2b" = locopt ) ) ]]
778	then
779	found=false
780	for actual in $input_list
781	do
782	for formal in $s3
783	do
784	[[ $actual = $formal \|\| "$formal" = "-" ]] && found=true
785	done
786	done
787	if [[ $found = true ]]
788	then
789	(( iin = iin + 1 ))
790	localin[$iin]=$s1; transin[$iin]=$s2b; actionin[$iin]=$s2c;
791	typein[$iin]=$s3; pathin[$iin]=$s4; endin[$iin]=$s5;
792	extin[$iin]=$s6
793	fi
794	elif [[ "$s2a" = out && ! ( $do_remote = true && "$s2b" = loc ) ]]
795	then
796	found=false
797	for actual in $output_list
798	do
799	for formal in $s3
800	do
801	[[ $actual = $formal \|\| "$formal" = "-" ]] && found=true
802	done
803	done
804	if [[ $found = true ]]
805	then
806	(( iout = iout + 1 ))
807	localout[$iout]=$s1; actionout[$iout]=$s2c; typeout[$iout]=$s3;
808	pathout[$iout]=$s4; endout[$iout]=$s5; extout[$iout]=$s6
809	fi
810	elif [[ "$s2a" != in && "$s2a" != out ]]
811	then
812	printf "\n +++ I/O-attribute in configuration file $config_file has the invalid"
813	printf "\n value \"$s2\". Only \"in\" and \"out\" are allowed!"
814	locat=connect; exit
815	fi
816	IFS="$IFSALT"
817	fi
818	done < $config_file
819
820	else
821
822
823	# INTERPRETATION DER KONFIGURATIONSDATEI MITTELS FORTRAN 90 - PROGRAMM
824	[[ $silent = false ]] && printf "..."
825	export cond1 cond2 config_file do_remote do_trace input_list localhost output_list
826	export interpreted_config_file=.icf.$RANDOM
827
828
829
830	# ENVIRONMENT-VARIABLEN FUER INTERPRET_CONFIG UEBER NAMELIST_DATEI ZUR
831	# VERFUEGUNG STELLEN
832	cat > .mrun_environment << %%END%%
833	&mrun_environment cond1 = '$cond1', cond2 = '$cond2',
834	config_file = '$config_file', do_remote = '$do_remote',
835	do_trace = '$do_trace', host = '$host',
836	input_list = '$input_list', icf = '$interpreted_config_file',
837	localhost = '$localhost', output_list = '$output_list' /
838
839	%%END%%
840
841	# WERTE VON MRUN-OPTIONEN SICHERN UND DAMIT GEGEBENENFALLS SPAETER DIE
842	# IN DER KONFIGURAIONSDATEI ANGEGEBENEN WERTE UEBERSTEUERN
843	mrun_memory=$memory
844	mrun_group_number=$group_number
845	mrun_cpumax=$cpumax
846	mrun_numprocs=$numprocs
847
848	if [[ $localhost_realname = "gate" ]]
849	then
850	interpret_config_gate.x
851	else
852	interpret_config.x
853	fi
854	rm .mrun_environment
855
856
857	# AUSFUEHRUNG DER GENERIERTEN SHELL-KOMMANDOS IN DIESER SHELL
858	chmod u+x $interpreted_config_file
859	export PATH=$PATH:.
860	. $interpreted_config_file
861	rm $interpreted_config_file
862
863
864	# OPTIONSWERTE UEBERSTEUERN KONFIGURATIONSDATEI
865	[[ $mrun_memory != 0 ]] && memory=$mrun_memory
866	[[ "$mrun_group_number" != "none" ]] && group_number=$mrun_group_number
867	[[ $mrun_cpumax != 0 ]] && cpumax=$mrun_cpumax
868	[[ "$mrun_numprocs" != "" ]] && numprocs=$mrun_numprocs
869
870	fi
871
872
873	# QUELLTEXTVERZEICHNIS AUF LOKALER MASCHINE AUS KONFIGURATIONSDATEI
874	# BESTIMMEN (WUERDE SONST EVTL. DAS VERZEICHNIS DES JEWEILS UNTER -h
875	# ANGEGEBENEN REMOTE-RECHNERS SEIN)
876	# BEI BATCH-JOBS SIND DIE ZU UEBERSETZENDEN PROGRAMMTEILE SCHON KOMPLETT
877	if [[ "$SOURCES_COMPLETE" = "" ]]
878	then
879
880	# ZUERST PRUEFEN, OB EIN GLOBALER QUELLTEXTPFAD FUER ALLE RECHNER
881	# VEREINBART WURDE
882	source_path=""
883	line=""
884	grep "%source_path" $config_file > tmp_mrun
885	while read line
886	do
887	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
888	then
889	if [[ "$(echo $line \| cut -d" " -f3)" = "" ]]
890	then
891	global_source_path=`echo $line \| cut -d" " -f2`
892	fi
893	fi
894	done < tmp_mrun
895
896	line=""
897	found=false
898	grep " $localhost" $config_file \| grep "%source_path" > tmp_mrun
899	while read line
900	do
901	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
902	then
903	if [[ $found = true ]]
904	then
905	printf "\n\n +++ more than one source path found in configuration file"
906	printf "\n for local host \"$localhost\" "
907	locat=source_path; exit
908	fi
909	source_path=`echo $line \| cut -d" " -f2`
910	found=true
911	fi
912	done < tmp_mrun
913	rm tmp_mrun
914
915	if [[ "$source_path" = "" ]]
916	then
917	if [[ "$global_source_path" != "" ]]
918	then
919	source_path=$global_source_path
920	else
921	printf "\n\n +++ no source path found in configuration file"
922	printf "\n for local host \"$localhost\" "
923	locat=source_path; exit
924	fi
925	fi
926	eval source_path=$source_path
927
928	if [[ ! -d $source_path ]]
929	then
930	printf "\n\n +++ source path \"$source_path\" on local host"
931	printf "\n \"$localhost\" does not exist"
932	locat=source_path; exit
933	fi
934
935	fi
936
937
938	# GLOBALE REVISIONSNUMMER ERMITTELN (FORTSETZUNGSLAEUFEN WIRD DIESE
939	# DURCH OPTION -G MITGETEILT)
940	if [[ "$global_revision" = "" ]]
941	then
942	global_revision=`svnversion $source_path 2>/dev/null`
943	global_revision="Rev: $global_revision"
944	fi
945
946
947	# NOCHMAL PRUEFEN, OB AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL
948	# (HOST KANN IN KONFIGURATIONSDATEI ANDERS FESTGELEGT WORDEN SEIN)
949	# WERT VON do_remote WIRD FUER DATEIVERBINDUNGEN BENOETIGT.
950	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
951	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
952	if [[ -n $host && "$host" != $localhost ]]
953	then
954	do_batch=true
955	do_remote=true
956	case $host in
957	(ibm\|ibmb\|ibmh\|ibms\|ibmy\|lcsgib\|lcsgih\|lctit\|nech\|neck\|unics) true;;
958	(*) printf "\n"
959	printf "\n +++ sorry: execution of batch jobs on remote host \"$host\""
960	printf "\n is not available"
961	locat=nqs; (( iec = 0 )); exit;;
962	esac
963	else
964	host=$localhost
965	fi
966
967
968	# PRUEFUNG EINIGER PROZESSORZAHLANGABEN BEI RECHNUNGEN AUF PARALLELRECHNERN
969	if [[ "$cond1" = parallel \|\| "$cond2" = parallel ]]
970	then
971
972	# PRUEFEN, OB DIE ANZAHL DER ZU VERWENDENDEN PES ANGEGEBEN WURDE
973	if [[ ! -n $numprocs ]]
974	then
975	printf "\n"
976	printf "\n +++ option \"-K parallel\" requires additional specification"
977	printf "\n of the number of processors to be used by"
978	printf "\n mrun-option \"-X\" or by environment-variable"
979	printf "\n \"numprocs\" in the configuration file"
980	locat=numprocs; (( iec = 0 )); exit
981	fi
982
983	# PRUEFEN, OB DIE PROZESSORANZAHL PRO KNOTEN ANGEGEBEN WURDE (GGF.
984	# DEFAULT-WERT SETZEN) UND OB SIE EIN GANZZAHLIGER TEILER DER
985	# GESAMTPROZESSORANZAHL IST
986	if [[ $host = nech \|\| $host = neck \|\| $host = ibmh \|\| $host = ibmb \|\| $host = ibms ]]
987	then
988	[[ "$tasks_per_node" = "" ]] && tasks_per_node=6
989	(( ival = $tasks_per_node ))
990	(( pes = numprocs ))
991	# if [[ $(echo $package_list \| grep -c dvrp_graphics+1PE) = 1 ]]
992	# then
993	# (( pes = pes - 1 ))
994	# fi
995	(( ii = pes / ival ))
996	if (( pes - ii * ival > 0 ))
997	then
998	printf "\n"
999	printf "\n +++ tasks per node (option \"-T\") must be an integral"
1000	printf "\n divisor of the total number of processors (option \"-X\")"
1001	printf "\n values of this mrun-call: \"-T $tasks_per_node\" \"-X $numprocs\""
1002	locat=tasks_per_node; (( iec = 0 )); exit
1003	fi
1004	fi
1005
1006	# IBMY HAT NUR EINEN KNOTEN
1007	if [[ $host = ibmy ]]
1008	then
1009	if [[ "$tasks_per_node" != "" && "$tasks_per_node" != "$numprocs" ]]
1010	then
1011	printf "\n"
1012	printf "\n +++ on ibmy, tasks per node (option \"-T\") must be equal to the"
1013	printf "\n total number of processors (option \"-X\")"
1014	printf "\n values of this mrun-call: \"-T $tasks_per_node\" \"-X $numprocs\""
1015	locat=tasks_per_node; (( iec = 0 )); exit
1016	fi
1017	fi
1018
1019	# FALLS OPENMP PARALLELISIERUNG VERWENDET WERDEN SOLL, ANZAHL VON THREADS
1020	# SETZEN UND ZAHL DER TASKS PRO KNOTEN AUF 1 SETZEN
1021	if [[ $use_openmp = true ]]
1022	then
1023	threads_per_task=$tasks_per_node
1024	tasks_per_node=1
1025	fi
1026	OOPT="-O $threads_per_task"
1027	TOPT="-T $tasks_per_node"
1028
1029	# GESAMTZAHL DER KNOTEN BESTIMMEN
1030	if [[ "$tasks_per_node" != "" ]]
1031	then
1032	(( nodes = numprocs / ( tasks_per_node * threads_per_task ) ))
1033	fi
1034
1035	# PRUEFEN, OB NODE USAGE EINEN ERLAUBTEN WERT HAT BZW. DEN DEFAULT
1036	# SETZEN
1037	if [[ $node_usage = default ]]
1038	then
1039	if [[ $host = ibms ]]
1040	then
1041	node_usage=shared
1042	elif [[ $host = lctit ]]
1043	then
1044	node_usage=sla3
1045	elif [[ $(echo $host \| cut -c1-5) = lcsgi ]]
1046	then
1047	node_usage=singlejob
1048	else
1049	node_usage=not_shared
1050	fi
1051	fi
1052
1053	if [[ $node_usage != shared && $node_usage != not_shared && $node_usage != singlejob && "$(echo $node_usage \| cut -c1-3)" != "sla" && $node_usage != novice ]]
1054	then
1055	printf "\n"
1056	printf "\n +++ node usage (option \"-n\") is only allowed to be set"
1057	printf "\n \"shared\" or \"not_shared\""
1058	locat=tasks_per_node; (( iec = 0 )); exit
1059	fi
1060
1061	fi
1062
1063	# PRUEFEN, OB HOSTFILE EXISTIERT
1064	if [[ -n $hostfile ]]
1065	then
1066	if [[ ! -f $hostfile ]]
1067	then
1068	printf "\n"
1069	printf "\n +++ hostfile \"$hostfile\" does not exist"
1070	locat=hostfile; exit
1071	fi
1072	fi
1073
1074	# PRUEFEN, OB RHOSTS DATEI EXISTIERT. GEGEBENENFALLS ANLEGEN BZW. ERWEITERN
1075	if [[ $host = ibmy && $do_remote = false ]]
1076	then
1077	if [[ ! -f $HOME/.rhosts ]]
1078	then
1079	echo "gfdl5.yonsei.ac.kr" > $HOME/.rhosts
1080	printf "\n\n *** file:"
1081	printf "\n $HOME/.rhosts"
1082	printf "\n was created\n"
1083	fi
1084	if [[ $(grep -c gfdl5.yonsei.ac.kr $HOME/.rhosts) = 0 ]]
1085	then
1086	echo "gfdl5.yonsei.ac.kr" >> $HOME/.rhosts
1087	printf "\n\n *** file:"
1088	printf "\n $HOME/.rhosts"
1089	printf "\n was extended by the name of the current host\n"
1090	fi
1091	fi
1092
1093
1094
1095	# FALLS NICHT VORGEGEBEN, DEFAULT-QUEUE AUF DER ZIELMASCHINE FESTLEGEN
1096	if [[ $queue = none ]]
1097	then
1098	case $host in
1099	(ibmb) if [[ $node_usage = shared ]]
1100	then
1101	queue=cshare
1102	else
1103	queue=csolo
1104	fi;;
1105	(ibmh) if [[ $node_usage = shared ]]
1106	then
1107	queue=cshare
1108	else
1109	queue=csolo
1110	fi;;
1111	(ibmy) queue=parallel;;
1112	(lctit) queue=sla3;;
1113	(nech) queue=none;;
1114	(neck) queue=P;;
1115	(unics) queue=unics;;
1116	esac
1117	fi
1118
1119
1120	# VOLLSTAENDIGE DATEINAMEN DER INPUT-FILES BILDEN,
1121	# INPUT-DATEIEN AUF VORHANDENSEIN PRUEFEN UND EVTL. HOECHSTE ZYKLUSNUMMER
1122	# ERMITTELN
1123	(( i = 0 ))
1124	while (( i < iin ))
1125	do
1126	(( i = i + 1 ))
1127	(( maxcycle = 0 ))
1128
1129	# NAMENSBILDUNG (EVTL. IST FESTER DATEINAME VORGEGEBEN)
1130	if [[ "${actionin[$i]}" = di ]]
1131	then
1132	remotepathin[$i]=${pathin[$i]}/${endin[$i]} # REMOTE-PFAD ERST AUF
1133	# REM-MASCHINE AUSWERTEN
1134	eval filename=${pathin[$i]}/${endin[$i]}
1135	else
1136	remotepathin[$i]=${pathin[$i]}/${afname}${endin[$i]} # REMOTE-PFAD ERST AUF
1137	# REM-MASCHINE AUSWERTEN
1138	eval filename=${pathin[$i]}/${afname}${endin[$i]}
1139	fi
1140
1141	# PRUEFEN AUF VORHANDENSEIN
1142	if [[ $(ls $filename* 2>&1 \| grep -c "not found") = 1 \|\| \
1143	$(ls $filename* 2>&1 \| grep -c "No such file") = 1 \|\| \
1144	$(ls $filename* 2>&1 \| grep -c "does not exist") = 1 ]]
1145	then
1146	# DATEIEN MIT EXTENSION (Z.B. NC) MUESSEN NICHT ZWINGEND VORHANDEN
1147	# SEIN, DESHALB IN SOLCHEN FAELLEN KEIN ABBRUCH. DIES IST NUR EINE
1148	# VORUEBERGEHENDE LOESUNG (OKT 05). NICHT ZWINGEND BENOETIGTE
1149	# EINGABEDATEIEN SOLLTEN EINE SPEZIELLE OPTION IN DER DATEI-
1150	# VERBINDUNGSANWEISUNG BEKOMMEN (Z.B. inopt?)
1151	if [[ "${transin[$i]}" != "locopt" ]]
1152	then
1153	printf "\n\n +++ INPUT-file: "
1154	if [[ "${extin[$i]}" = "" ]]
1155	then
1156	printf "\n $filename"
1157	else
1158	printf "\n $filename.${extin[$i]}"
1159	fi
1160	printf "\n does not exist\n"
1161	locat=input; exit
1162	else
1163	transin[$i]="unavailable"
1164	fi
1165	else
1166
1167	# ZYKLUSNUMMER FESTSTELLEN
1168	ls -1 -d $filename > filelist 2>/dev/null
1169	ls -1 -d $filename.* >> filelist 2>/dev/null
1170	while read zeile
1171	do
1172	cycle=$(print $zeile \| cut -f2 -d".")
1173	if [[ "$cycle" = "$zeile" ]]
1174	then
1175	(( icycle = 0 ))
1176	elif [[ "$cycle" = "${extin[$i]}" ]]
1177	then
1178	(( icycle = 0 ))
1179	else
1180	(( icycle = $cycle ))
1181	fi
1182	if (( icycle > maxcycle ))
1183	then
1184	(( maxcycle = icycle ))
1185	file_to_be_used=$zeile
1186	fi
1187	done <filelist
1188	rm filelist
1189
1190	# EVTL. ZYKLUSNUMMER AN DATEINAMEN ANFUEGEN
1191	if (( maxcycle > 0 ))
1192	then
1193	if [[ "${extin[$i]}" != " " && "${extin[$i]}" != "" ]]
1194	then
1195	filename=${filename}.$maxcycle.${extin[$i]}
1196	else
1197	filename=${filename}.$maxcycle
1198	fi
1199	else
1200	if [[ "${extin[$i]}" != " " && "${extin[$i]}" != "" ]]
1201	then
1202	filename=${filename}.${extin[$i]}
1203	fi
1204	fi
1205
1206	# DATEINAMEN OHNE PFAD ABER MIT ZYKLUSNUMMER ABSPEICHERN,
1207	# DA SPAETER BEI RUECKSPEICHERN VOM ARCHIVSYSTEM EVTL. BENOETIGT
1208	absnamein[$i]=$filename
1209	if (( maxcycle > 0 ))
1210	then
1211	if [[ "${actionin[$i]}" = di ]]
1212	then
1213	frelin[$i]=${endin[$i]}.$maxcycle
1214	else
1215	frelin[$i]=${afname}${endin[$i]}.$maxcycle
1216	fi
1217	else
1218	if [[ "${actionin[$i]}" = di ]]
1219	then
1220	frelin[$i]=${endin[$i]}
1221	else
1222	frelin[$i]=${afname}${endin[$i]}
1223	fi
1224	fi
1225
1226	fi
1227	done
1228
1229
1230	# VOLLSTAENDIGE DATEINAMEN (OHNE $ ODER ~) DER OUTPUT-FILES BILDEN,
1231	# OUTPUT-DATEIEN AUF VORHANDENSEIN PRUEFEN UND EVTL. HOECHSTE ZYKLUSNUMMER
1232	# ERMITTELN ODER, FALLS NICHT VORHANDEN, PRUEFEN, OB SIE SICH ANLEGEN LASSEN
1233	# DIESE AKTIONEN FINDEN NICHT STATT, WENN PROGRAMM AUF REMOTE-MASCHINE
1234	# RECHNET UND DATEI ANSCHLIESSEND TRANSFERIERT WERDEN SOLL!
1235	(( i = 0 ))
1236	while (( i < iout ))
1237	do
1238	(( i = i + 1 ))
1239	if [[ ! ( $fromhost != $localhost && ( "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = tra \|\| "${actionout[$i]}" = trpe ) ) ]]
1240	then
1241	if [[ "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = trpe ]]
1242	then
1243	actionout[$i]=""
1244	elif [[ "${actionout[$i]}" = tra ]]
1245	then
1246	actionout[$i]=a
1247	fi
1248	(( maxcycle = 0 ))
1249	eval filename=${pathout[$i]}/${fname}${endout[$i]}
1250	eval catalogname=${pathout[$i]}
1251	if [[ $(ls $filename* 2>&1 \| grep -c "not found") = 1 \|\| \
1252	$(ls $filename* 2>&1 \| grep -c "No such file") = 1 \|\| \
1253	$(ls $filename* 2>&1 \| grep -c "does not exist") = 1 ]]
1254	then
1255
1256	# OUTPUT-DATEI NICHT VORHANDEN. PRUEFEN, OB ANLEGEN MOEGLICH.
1257	if cat /dev/null > $filename
1258	then
1259	rm $filename
1260	else
1261
1262	# PRUEFEN, OB KATALOG VORHANDEN UND EVTL. DIESEN ANLEGEN
1263	if [[ ! -d $catalogname ]]
1264	then
1265	if mkdir -p $catalogname
1266	then
1267	printf "\n\n *** directory:"
1268	printf "\n $catalogname"
1269	printf "\n was created\n"
1270	else
1271	printf "\n\n +++ OUTPUT-file:"
1272	printf "\n $filename"
1273	printf "\n cannot be created, because directory does not exist"
1274	printf "\n and cannot be created either"
1275	printf "\n"
1276	locat=output ; exit
1277	fi 2>/dev/null
1278	else
1279	printf "\n\n +++ OUTPUT-file:"
1280	printf "\n $filename"
1281	printf "\n cannot be created, although directory exists"
1282	printf "\n"
1283	locat=output ; exit
1284	fi
1285	fi 2>/dev/null
1286	else
1287
1288	# ZYKLUSNUMMER FESTSTELLEN
1289	ls -1 -d $filename > filelist 2>/dev/null
1290	ls -1 -d $filename.* >> filelist 2>/dev/null
1291	while read zeile
1292	do
1293	cycle=$(print $zeile \| cut -f2 -d".")
1294	if [[ "$cycle" = "$zeile" \|\| "$cycle" = ${extout[$i]} ]]
1295	then
1296	(( icycle = 1 ))
1297	else
1298	(( icycle = $cycle + 1 ))
1299	fi
1300	if (( icycle > maxcycle ))
1301	then
1302	(( maxcycle = icycle ))
1303	fi
1304	done <filelist
1305	rm filelist
1306	fi
1307
1308	# EVTL. ZYKLUSNUMMER AN DATEINAMEN ANFUEGEN UND PRUEFEN, OB SICH
1309	# DATEI AUCH WIRKLICH ANLEGEN LAESST. IM APPEND-FALL MUSS AN DEN
1310	# HOECHSTEN VORHANDENEN ZYKLUS-ANGEHAENGT WERDEN. ANLAGEPRUEFUNG
1311	# IST DANN NATUERLICH NICHT ZULAESSIG BZW. MOEGLICH
1312	if [[ "${actionout[$i]}" != a ]]
1313	then
1314	if (( maxcycle > 0 ))
1315	then
1316	filename=${filename}.$maxcycle
1317	if cat /dev/null > $filename
1318	then
1319	rm $filename
1320	else
1321	printf "\n +++ OUTPUT-file:"
1322	printf "\n $filename"
1323	printf "\n cannot be created"
1324	locat=output ; exit
1325	fi
1326	fi
1327	else
1328	(( maxcycle = maxcycle - 1 ))
1329	if (( maxcycle > 0 ))
1330	then
1331	filename=${filename}.$maxcycle
1332	fi
1333	fi
1334
1335	# DATEINAMEN OHNE PFAD ABER MIT ZYKLUSNUMMER ABSPEICHERN,
1336	# DA SPAETER BEI ABLAGE AUF ARCHIVSYSTEM BZW. FUER
1337	# DATEI OUTPUT_FILE_CONNECTIONS EVTL. BENOETIGT
1338	pathout[$i]=$filename
1339	if (( maxcycle > 0 ))
1340	then
1341	frelout[$i]=${fname}${endout[$i]}.$maxcycle
1342	else
1343	frelout[$i]=${fname}${endout[$i]}
1344	fi
1345
1346	fi
1347	done
1348
1349
1350	# DAS DVRP-PAKET ERFORDERT EINE ENTSPRECHENDE BIBLIOTHEK
1351	if [[ $(echo $package_list \| grep -c dvrp_graphics) != 0 ]]
1352	then
1353	if [[ "$dvrp_inc" = "" ]]
1354	then
1355	printf "\n\n +++ no value for \"dvrp_inc\" given in configuration file"
1356	printf "\n This is required for the dvrp_graphics package.\n"
1357	locat=dvrp; exit
1358	fi
1359	if [[ "$dvrp_lib" = "" ]]
1360	then
1361	printf "\n\n +++ no value for \"dvrp_lib\" given in configuration file"
1362	printf "\n This is required for the dvrp_graphics package.\n"
1363	locat=dvrp; exit
1364	fi
1365	fi
1366
1367
1368	# PRUEFEN, OB ENTWEDER HAUPTPROGRAMM ODER NUR EIN AUSFUEHRBARES
1369	# PROGRAMM VEREINBART WURDE (IN DIESEM FALL BRAUCHT IM WEITEREN NICHT
1370	# UEBERSETZT ZU WERDEN)
1371	if [[ "$mainprog" = "" && "$executable" = "" ]]
1372	then
1373	printf "\n +++ neither main program nor executable defined"
1374	locat=source; exit
1375	elif [[ "$mainprog" != "" && "$executable" != "" ]]
1376	then
1377	printf "\n +++ main program as well as executable defined"
1378	locat=source; exit
1379	elif [[ "$mainprog" = "" && "$executable" != "" ]]
1380	then
1381	do_compile=false
1382	fi
1383
1384
1385	# ALLE ZU UEBERSETZENDEN PROGRAMMTEILE ZUSAMMENSAMMELN
1386	# BEI BATCH-JOBS IST DIES NICHT NOETIG, WEIL DIE PROGRAMMTEILE BEREITS DURCH
1387	# DEN MRUN-AUFRUF ERMITTELT SIND, DER DEN BATCH-JOB GENERIERT HAT, UND
1388	# IM VERZEICHNIS SOURCES_FOR_RUN_... ABGELEGT SIND
1389	if [[ $do_compile = true && "$SOURCES_COMPLETE" = "" ]]
1390	then
1391
1392	[[ "$source_list" = LM ]] && source_list=LOCALLY_MODIFIED
1393	[[ "$source_list" = WP ]] && source_list=WRITE_PERMIT
1394
1395	if [[ $restart_run != true ]]
1396	then
1397	rm -rf SOURCES_FOR_RUN_$fname
1398	mkdir SOURCES_FOR_RUN_$fname
1399	fi
1400
1401
1402	# EVTL. ZU UEBERSETZENDE PROGRAMMTEILE DADURCH BESTIMMEN, DASS GEPRUEFT
1403	# WIRD, WELCHE DATEIEN WRITE-PERMIT BESITZEN (DATEIEN SOLLTEN DESHALB
1404	# UNTER RCS-KONTROLLE STEHEN). MIT DER VARIABLEN EXCLUDE KOENNEN
1405	# BESTIMMTE DATEIEN GRUNDSAETZLICH VON DER UEBERSETZUNG AUSGESCHLOSSEN
1406	# WERDEN. DIES IST NUR BEI MANUELLEM START VON MRUN DURCH DEN BENUTZER
1407	# MOEGLICH, DA BEI AUTOMATISCHEN RESTARTS TEST DURCH DIE TATSAECHLICH
1408	# ZU UBERSETZENDEN DATEIEN ERSETZT IST.
1409	# ALLE ERMITTELTEN DATEIEN WERDEN IM VERZEICHNIS SOURCES_FOR_RUN_...
1410	# GESAMMELT
1411	if [[ "$source_list" = WRITE_PERMIT ]]
1412	then
1413
1414	source_list=""
1415	cd $source_path
1416
1417
1418	# ALLE MOEGLICHEN QUELLCODEDATEIEN AUFLISTEN
1419	Names=$(ls -1 *.f90 2>&1)
1420	[[ $(echo $Names \| grep -c '*.f90') = 0 ]] && Filenames="$Names"
1421	Names=$(ls -1 *.F90 2>&1)
1422	[[ $(echo $Names \| grep -c '*.F90') = 0 ]] && Filenames="$Filenames $Names"
1423	Names=$(ls -1 *.F 2>&1)
1424	[[ $(echo $Names \| grep -c '*.F') = 0 ]] && Filenames="$Filenames $Names"
1425	Names=$(ls -1 *.f 2>&1)
1426	[[ $(echo $Names \| grep -c '*.f') = 0 ]] && Filenames="$Filenames $Names"
1427	Names=$(ls -1 *.c 2>&1)
1428	[[ $(echo $Names \| grep -c '*.c') = 0 ]] && Filenames="$Filenames $Names"
1429
1430
1431	# DATEIEN MIT WRITE-PERMIT NACH SOURCES_FOR_RUN_... KOPIEREN
1432	for dateiname in $Filenames
1433	do
1434	if [[ -w $dateiname ]]
1435	then
1436	if [[ "$exclude" = "" \|\| $(echo $exclude \| grep -c $dateiname) = 0 ]]
1437	then
1438	cp $dateiname $working_directory/SOURCES_FOR_RUN_$fname
1439	source_list=$source_list"$dateiname "
1440	fi
1441	fi
1442	done
1443
1444	cd - > /dev/null
1445
1446
1447	elif [[ "$source_list" = LOCALLY_MODIFIED ]]
1448	then
1449
1450	# MODIFIZIERTE DATEIEN DER SVN-ARBEITSKOPIE BESTIMMEN
1451	source_list=""
1452	cd $source_path
1453
1454
1455	# PRUEFEN, OB VERZEICHNIS UEBERHAUPT UNTER SVN-KONTROLLE STEHT
1456	if [[ ! -d .svn ]]
1457	then
1458	printf "\n\n +++ source directory"
1459	printf "\n \"$source_path\" "
1460	printf "\n is not under control of \"subversion\"."
1461	printf "\n Please do not use mrun-option \"-s LOCALLY MODIFIED\"\n"
1462	fi
1463
1464
1465	# ALLE MODIFIZIERTEN QUELLCODEDATEIEN AUFLISTEN
1466	Filenames=""
1467	svn status > tmp_mrun
1468	while read line
1469	do
1470	firstc=`echo $line \| cut -c1`
1471	if [[ $firstc = M \|\| $firstc = "?" ]]
1472	then
1473	Name=`echo "$line" \| cut -c8-`
1474	extension=`echo $Name \| cut -d. -f2`
1475	if [[ "$extension" = f90 \|\| "$extension" = F90 \|\| "$extension" = f \|\| "$extension" = F \|\| "$extension" = c ]]
1476	then
1477	Filenames="$Filenames "$Name
1478	fi
1479	fi
1480	done < tmp_mrun
1481
1482
1483	# DATEIEN NACH SOURCES_FOR_RUN_... KOPIEREN
1484	for dateiname in $Filenames
1485	do
1486	cp $dateiname $working_directory/SOURCES_FOR_RUN_$fname
1487	source_list=$source_list"$dateiname "
1488	done
1489
1490	cd - > /dev/null
1491
1492
1493	# MITTELS OPTION -s ANGEGEBENE DATEIEN NACH SOURCES_FOR_RUN_... KOPIEREN
1494	# BEI AUTOMATISCHEN FORTSETZUNGSLAEUFEN SIND DORT SCHON ALLE DATEIEN
1495	# VORHANDEN
1496	elif [[ "$source_list" != "" && $restart_run != true ]]
1497	then
1498
1499	cd $source_path
1500
1501	for filename in $source_list
1502	do
1503
1504	# QUELLTEXT-DATEI DARF KEINE PFADE BEINHALTEN
1505	if [[ $(print $filename \| grep -c "/") != 0 ]]
1506	then
1507	printf "\n +++ source code file: $filename"
1508	printf "\n must not contain (\"/\") "
1509	locat=source; exit
1510	fi
1511
1512	if [[ ! -f $filename ]]
1513	then
1514	printf "\n +++ source code file: $filename"
1515	printf "\n does not exist"
1516	locat=source; exit
1517	else
1518	cp $filename $working_directory/SOURCES_FOR_RUN_$fname
1519	fi
1520
1521	done
1522
1523	cd - > /dev/null
1524
1525	fi
1526
1527
1528	# PRUEFEN, OB ENTWEDER HAUPTPROGRAMM VORHANDEN UND ES EVTL. IN DER
1529	# LISTE DER ZU UEBERSETZENDEN PROGRAMMTEILE MIT ENTHALTEN IST (WENN
1530	# NICHT, WIRD ES DIESER LISTE HINZUGEFUEGT)
1531	if [[ $restart_run != true ]]
1532	then
1533
1534	if [[ ! -f "$source_path/$mainprog" ]]
1535	then
1536	printf "\n\n +++ main program: $mainprog"
1537	printf "\n does not exist in source directory"
1538	printf "\n \"$source_path\"\n"
1539	locat=source; exit
1540	else
1541	if [[ $(echo $source_list \| grep -c $mainprog) = 0 ]]
1542	then
1543	cp $source_path/$mainprog SOURCES_FOR_RUN_$fname
1544	source_list=${mainprog}" $source_list"
1545	fi
1546	fi
1547	fi
1548
1549
1550	# DATEIEN AUS ZUSAETZLICHEM QUELLVERZEICHNIS HINZUFUEGEN
1551	if [[ $restart_run != true && "$add_source_path" != "" ]]
1552	then
1553
1554	# GIBT ES DAS VERZEICHNIS UEBERHAUPT?
1555	if [[ ! -d $add_source_path ]]
1556	then
1557	printf "\n\n +++ WARNING: additional source code directory"
1558	printf "\n \"$add_source_path\" "
1559	printf "\n does not exist or is not a directory."
1560	printf "\n No source code will be used from this directory!\n"
1561	add_source_path=""
1562	sleep 3
1563	else
1564
1565	cd $add_source_path
1566
1567	Names=$(ls -1 *.f90 2>&1)
1568	[[ $(echo $Names \| grep -c '*.f90') = 0 ]] && AddFilenames="$Names"
1569	Names=$(ls -1 *.F90 2>&1)
1570	[[ $(echo $Names \| grep -c '*.F90') = 0 ]] && AddFilenames="$AddFilenames $Names"
1571	Names=$(ls -1 *.F 2>&1)
1572	[[ $(echo $Names \| grep -c '*.F') = 0 ]] && AddFilenames="$AddFilenames $Names"
1573	Names=$(ls -1 *.f 2>&1)
1574	[[ $(echo $Names \| grep -c '*.f') = 0 ]] && AddFilenames="$AddFilenames $Names"
1575	Names=$(ls -1 *.c 2>&1)
1576	[[ $(echo $Names \| grep -c '*.c') = 0 ]] && AddFilenames="$AddFilenames $Names"
1577
1578	cd - > /dev/null
1579	cd SOURCES_FOR_RUN_$fname
1580
1581	for dateiname in $AddFilenames
1582	do
1583	if [[ -f $dateiname ]]
1584	then
1585	printf "\n +++ source code file \"$dateiname\" found in additional"
1586	printf "\n source code directory \"$add_source_path\" "
1587	printf "\n as well as in directory \"$source_path\"."
1588	locat=source; exit
1589	fi
1590
1591	cp $add_source_path/$dateiname .
1592	source_list="$source_list $dateiname"
1593
1594	# Default User-Interface von der Liste entfernen, falls Datei
1595	# ein User-Interface enthaelt
1596	if [[ $( cat $dateiname \| grep -c "END SUBROUTINE user_parin" ) != 0 ]]
1597	then
1598	if [[ $dateiname != user_interface.f90 && -f user_interface.f90 ]]
1599	then
1600	rm -rf user_interface.f90
1601	source_list=`echo $source_list \| sed -e 's/user_interface.f90//'`
1602	printf "\n\n *** default \"user_interface.f90\" removed from the files to be translated"
1603	printf "\n since a user-interface is found in file"
1604	printf "\n \"$add_source_path/$dateiname\" \n"
1605	sleep 3
1606	else
1607	printf "\n\n *** user-interface file \"$dateiname\" "
1608	printf "\n added to the files to be translated \n"
1609	sleep 3
1610	fi
1611	fi
1612	done
1613
1614	cd - > /dev/null
1615	fi
1616	fi
1617
1618
1619	# ALLE UNTERPROGRAMME, DIE ZU VEREINBARTEN SOFTWAREPAKETEN GEHOEREN,
1620	# DER LISTE DER ZU UEBERSETZENDEN DATEIEN HINZUFUEGEN
1621	if [[ $restart_run != true && -n $package_list ]]
1622	then
1623
1624	cd $source_path
1625
1626	for package in $package_list
1627	do
1628
1629	[[ $package = "dvrp_graphics+1PE" ]] && package=dvrp_graphics
1630
1631	# ERMITTELE ALLE DATEIEN, DIE ZUM PAKET GEHOEREN
1632	# FEHLERMELDUNGEN WERDEN ABGEFANGEN, DA * AUCH VERZEICHNISSNAMEN
1633	# LIEFERT
1634	package_source_list=`grep "defined( __$package " * 2>/dev/null \| cut -f1 -d:`
1635
1636
1637	# FUEGE DIESE DATEIEN DER LISTE DER ZU UEBERSETZENDEN DATEIEN
1638	# HINZU, FALLS SIE NOCH NICHT DAZUGEHOEREN
1639	for source_list_name in $package_source_list
1640	do
1641	if [[ $(echo $source_list \| grep -c $source_list_name) = 0 ]]
1642	then
1643
1644	# NUR DATEIEN MIT GUELTIGEN ENDUNGEN VERWENDEN
1645	ending=`echo $source_list_name \| cut -f2 -d.`
1646	if [[ "$ending" = f90 \|\| "$ending" = F90 \|\| "$ending" = f \|\| "$ending" = F \|\| "$ending" = c ]]
1647	then
1648	cp $source_list_name $working_directory/SOURCES_FOR_RUN_$fname
1649	source_list="$source_list $source_list_name"
1650	fi
1651	fi
1652	done
1653	done
1654
1655	cd - > /dev/null
1656	fi
1657
1658
1659	# MAKEFILE AUF VORHANDENSEIN PRUEFEN UND KOPIEREN
1660	# BEI RESTART-LAEUFEN LIEGT ES SCHON IM VERZEICHNIS SOURCES_FOR_RUN...
1661	if [[ "$restart_run" != true ]]
1662	then
1663	[[ "$makefile" = "" ]] && makefile=$source_path/Makefile
1664	if [[ ! -f $makefile ]]
1665	then
1666	printf "\n +++ file \"$makefile\" does not exist"
1667	locat=make; exit
1668	else
1669	cp $makefile SOURCES_FOR_RUN_$fname/Makefile
1670	fi
1671	fi
1672
1673	fi # do_compile=true
1674
1675
1676	# FALLS PROGRAMMTEILE UEBERSETZT WERDEN SOLLEN, FOLGEN JETZT EINIGE
1677	# UEBERPRUEFUNGEN UND DAS SETZEN DER PRAEPROZESSOR-DIREKTIVEN
1678	if [[ $do_compile = true ]]
1679	then
1680
1681	# PRAEPROZESSOR-DIREKTIVEN ZUM SELEKTIVEN AUSWAEHLEN VON CODETEILEN
1682	# ZUSAMMENSETZEN
1683	# DIREKTIVEN ZUM AKTIVIEREN VON RECHNERSPEZIFISCHEM CODE
1684	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1685	then
1686	cpp_options="${cpp_options},-D__ibm=__ibm"
1687	elif [[ $(echo $localhost \| cut -c1-3) = nec ]]
1688	then
1689	cpp_options="$cpp_options -D__nec"
1690	elif [[ $(echo $localhost \| cut -c1-2) = lc ]]
1691	then
1692	cpp_options="$cpp_options -D__lc"
1693	else
1694	cpp_options="$cpp_options -D__$localhost"
1695	fi
1696
1697	# DIREKTIVEN DIE DURCH OPTION -K BESTIMMT WERDEN (Z.B. PARALLEL)
1698	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1699	then
1700	[[ -n $cond1 ]] && cpp_options="${cpp_options},-D__$cond1=__$cond1"
1701	[[ -n $cond2 ]] && cpp_options="${cpp_options},-D__$cond2=__$cond2"
1702	else
1703	[[ -n $cond1 ]] && cpp_options="$cpp_options -D__$cond1"
1704	[[ -n $cond2 ]] && cpp_options="$cpp_options -D__$cond2"
1705	fi
1706
1707	# DIREKTIVEN DIE SOFTWAREPAKETE AKTIVIEREN (OPTION -p)
1708	if [[ -n $package_list ]]
1709	then
1710	for package in $package_list
1711	do
1712	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1713	then
1714	if [[ $package != "dvrp_graphics+1PE" ]]
1715	then
1716	cpp_options="${cpp_options},-D__$package=__$package"
1717	else
1718	cpp_options="${cpp_options},-D__dvrp_graphics=__dvrp_graphics"
1719	export use_seperate_pe_for_dvrp_output=true
1720	fi
1721	else
1722	if [[ $package != "dvrp_graphics+1PE" ]]
1723	then
1724	cpp_options="$cpp_options -D__$package"
1725	else
1726	cpp_options="$cpp_options -D__dvrp_graphics"
1727	export use_seperate_pe_for_dvrp_output=true
1728	fi
1729	fi
1730	done
1731	fi
1732
1733	# DIREKTIVEN DIE DURCH OPTION -D FESTGELEGT SIND
1734	if [[ -n $cpp_opts ]]
1735	then
1736	for popts in $cpp_opts
1737	do
1738	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1739	then
1740	cpp_options="${cpp_options},-D__$popts=__$popts"
1741	else
1742	cpp_options="$cpp_options -D__$popts"
1743	fi
1744	done
1745	fi
1746
1747	else
1748
1749
1750	# BEI LOKALEN RECHNUNGEN PRUEFEN, OB EXECUTABLE VORHANDEN
1751	if [[ $do_remote = false ]]
1752	then
1753	if [[ ! -f $executable ]]
1754	then
1755	printf "\n +++ executable file: $executable"
1756	printf "\n does not exist"
1757	locat=executable; exit
1758	fi
1759	fi
1760	fi
1761
1762
1763	# JOBMODUS FESTSTELLEN
1764	if [[ "$ENVIRONMENT" = BATCH && $localhost != lctit \|\| "$QUEUE" != interactive && $localhost = lctit ]]
1765	then
1766	jobmo=BATCH
1767	else
1768	jobmo=INTERACTIVE
1769	fi
1770
1771
1772	# HOSTSPEZIFISCHE DEFAULT-COMPILER SETZEN, FALLS NICHT BEREITS
1773	# DURCH BENUTZER ANDERWEITIG VEREINBART
1774	if [[ "$compiler_name" = "" ]]
1775	then
1776
1777	printf "\n +++ no compiler specified for \"$localhost $cond1 $cond2\""
1778	locat=compiler_name; exit
1779
1780	fi
1781
1782
1783	# COMPILER AUF NECK UEBERSCHREIBEN
1784	[[ $localhost = neck ]] && compiler_name=mpif90
1785
1786
1787
1788	# TEMPORAEREN KATALOGNAMEN BESTIMMEN
1789	kennung=$RANDOM
1790	if [[ "$tmp_user_catalog" = "" ]]
1791	then
1792	if [[ $localhost = ibmb \|\| $localhost = ibmh ]]
1793	then
1794	tmp_user_catalog=$TMPDIR
1795	elif [[ $localhost = nech ]]
1796	then
1797	tmp_user_catalog=$WRKSHR
1798	else
1799	tmp_user_catalog=/tmp
1800	fi
1801	fi
1802	TEMPDIR=$tmp_user_catalog/${usern}.$kennung
1803
1804
1805	# KATALOGNAMEN FUER ZWISCHENSPEICHERUNG VON FORTSETZUNGSLAUFDATEIEN
1806	# BESTIMMEN
1807	if [[ "$tmp_data_catalog" = "" ]]
1808	then
1809	if [[ $localhost = ibmb \|\| $localhost = ibmh ]]
1810	then
1811	tmp_data_catalog=$WORK/mrun_restart_data
1812	elif [[ $localhost = nech ]]
1813	then
1814	tmp_data_catalog=$WRKSHR/mrun_restart_data
1815	else
1816	tmp_data_catalog=/tmp/mrun_restart_data
1817	fi
1818	fi
1819
1820
1821	# EVENTUELL BEI LOKALEN RECHNUNGEN $-ZEICHEN IN ENVIRONMENT-VARIABLEN
1822	# ERSETZEN
1823	if [[ $do_remote = false && $do_compile = true ]]
1824	then
1825	eval fopts=\"$fopts\"
1826	eval lopts=\"$lopts\"
1827	fi
1828
1829
1830
1831	# COMPILE- UND LINK-OPTIONEN BESTIMMEN
1832	fopts="$fopts $netcdf_inc $dvrp_inc"
1833	lopts="$lopts $netcdf_lib $dvrp_lib"
1834	ROPTS="$ropts"
1835	if [[ ( $(echo $host \| cut -c1-3) = nec \|\| $(echo $host \| cut -c1-3) = ibm \|\| $host = lcsgih \|\| $host = lcsgib \|\| $host = lctit \|\| $host = lcfimm \|\| $host = lcxt4 ) && -n $numprocs ]]
1836	then
1837	XOPT="-X $numprocs"
1838	fi
1839
1840
1841
1842	# PRUEFEN DER CPU-ZEIT. (CPUMAX WIRD ALS ENV-VARIABLE VOM HAUTPRO-
1843	# GRAMM BENOETIGT
1844	done=false
1845	while [[ $done = false ]]
1846	do
1847	cputime=$cpumax
1848	if (( $cputime == 0 ))
1849	then
1850	printf "\n +++ cpu-time is undefined"
1851	printf "\n >>> Please type CPU-time in seconds as INTEGER:"
1852	printf "\n >>> "
1853	read cputime 1>/dev/null 2>&1
1854	else
1855	done=true
1856	fi
1857	cpumax=$cputime
1858	done
1859
1860	(( minuten = cputime / 60 ))
1861	(( sekunden = cputime - minuten * 60 ))
1862
1863
1864	# PRUEFEN DER KERNSPEICHERANFORDERUNG
1865	if [[ $do_batch = true ]]
1866	then
1867	done=false
1868	while [[ $done = false ]]
1869	do
1870	if (( memory == 0 ))
1871	then
1872	printf "\n +++ memory demand is undefined"
1873	printf "\n >>> Please type memory in MByte per process as INTEGER:"
1874	printf "\n >>> "
1875	read memory 1>/dev/null 2>&1
1876	else
1877	done=true
1878	fi
1879	done
1880	fi
1881
1882
1883	# PRUEFEN, OB FUER REMOTE-RECHNUNGEN EIN BENUTZERNAME ANGEGEBEN WURDE
1884	if [[ $do_remote = true && -z $remote_username ]]
1885	then
1886	while [[ -z $remote_username ]]
1887	do
1888	printf "\n +++ username on remote host \"$host\" is undefined"
1889	printf "\n >>> Please type username:"
1890	printf "\n >>> "
1891	read remote_username
1892	done
1893	mc="$mc -u$remote_username"
1894	fi
1895
1896	###########################################################################
1897	# HEADER-AUSGABE
1898	###########################################################################
1899
1900
1901	calltime=$(date)
1902	printf "\n"
1903	# [[ $silent = false ]] && clear
1904	printf "#--------------------------------------------------------------# \n"
1905	printf "\| $version$calltime \| \n"
1906	printf "\| \| \n"
1907	spalte1="called on:"; spalte2=$localhost_realname
1908	printf "\| $spalte1$spalte2 \| \n"
1909	if [[ $local_compile = false ]]
1910	then
1911	if [[ $do_remote = true ]]
1912	then
1913	spalte1="execution on:"; spalte2="$host (username: $remote_username)"
1914	else
1915	spalte1="execution on:"; spalte2="$host ($localhost_realname)"
1916	fi
1917	else
1918	spalte1="compiling test only!"; spalte2=""
1919	fi
1920	printf "\| $spalte1$spalte2 \| \n"
1921	if [[ -n $numprocs ]]
1922	then
1923	spalte1="number of PEs:"; spalte2=$numprocs
1924	printf "\| $spalte1$spalte2 \| \n"
1925	fi
1926	if [[ -n $tasks_per_node ]]
1927	then
1928	spalte1="tasks per node:"; spalte2="$tasks_per_node (number of nodes: $nodes)"
1929	printf "\| $spalte1$spalte2 \| \n"
1930	fi
1931	if [[ $threads_per_task != 1 ]]
1932	then
1933	spalte1="threads per task:"; spalte2="$threads_per_task"
1934	printf "\| $spalte1$spalte2 \| \n"
1935	fi
1936	printf "\| \| \n"
1937	if [[ $do_compile = true ]]
1938	then
1939	spalte1=cpp-directives:; spalte2=$cpp_options
1940	printf "\| $spalte1$spalte2 \| \n"
1941	zeile=$(echo "$cpp_options" \| cut -c41-)
1942	while [[ "$zeile" != "" ]]
1943	do
1944	spalte1=""
1945	spalte2=$zeile
1946	printf "\| $spalte1$spalte2 \| \n"
1947	zeile=$(echo "$zeile" \| cut -c41-)
1948	done
1949
1950	spalte1=compiler-options:; spalte2="$fopts"
1951	printf "\| $spalte1$spalte2 \| \n"
1952	zeile=$(echo "$fopts" \| cut -c41-)
1953	while [[ "$zeile" != "" ]]
1954	do
1955	spalte1=""
1956	spalte2=$zeile
1957	printf "\| $spalte1$spalte2 \| \n"
1958	zeile=$(echo "$zeile" \| cut -c41-)
1959	done
1960
1961	spalte1=linker-options:; spalte2=$lopts
1962	printf "\| $spalte1$spalte2 \| \n"
1963	zeile=$(echo "$lopts" \| cut -c41-)
1964	while [[ "$zeile" != "" ]]
1965	do
1966	spalte1=""
1967	spalte2=$zeile
1968	printf "\| $spalte1$spalte2 \| \n"
1969	zeile=$(echo "$zeile" \| cut -c41-)
1970	done
1971
1972	spalte1="main program":; spalte2=$mainprog
1973	printf "\| $spalte1$spalte2 \| \n"
1974	else
1975	spalte1=executable:; spalte2=$executable
1976	printf "\| $spalte1$spalte2 \| \n"
1977	fi
1978	printf "\| \| \n"
1979	spalte1="base name of files":; spalte2=$fname
1980	printf "\| $spalte1$spalte2 \| \n"
1981	if [[ $fname != $afname ]]
1982	then
1983	spalte1="base name of input files":; spalte2=$afname
1984	printf "\| $spalte1$spalte2 \| \n"
1985	fi
1986	spalte1="INPUT control list":; spalte2=$input_list
1987	printf "\| $spalte1$spalte2 \| \n"
1988	spalte1="OUTPUT control list":; spalte2=$output_list
1989	printf "\| $spalte1$spalte2 \| \n"
1990
1991	if [[ $do_batch = true \|\| "$LOADLBATCH" = yes ]]
1992	then
1993	spalte1="memory demand / PE":; spalte2="$memory MB"
1994	printf "\| $spalte1$spalte2 \| \n"
1995	spalte1=CPU-time:; spalte2="$minuten:$sekunden"
1996	printf "\| $spalte1$spalte2 \| \n"
1997	fi
1998
1999	if [[ $do_compile = true ]]
2000	then
2001	printf "\| \| \n"
2002	printf "\| Files to be compiled: \| \n"
2003	zeile=$source_list
2004	while [[ "$zeile" != "" ]]
2005	do
2006	spalte3=$zeile
2007	printf "\| $spalte3 \| \n"
2008	zeile=$(echo "$zeile" \| cut -c61-)
2009	done
2010	fi
2011	printf "#--------------------------------------------------------------#"
2012
2013
2014
2015	# BEDINGTE AUSGABE DER DATEIVERBINDUNGEN
2016	if [[ $do_trace = true ]]
2017	then
2018	(( i = 0 ))
2019	while (( i < iin ))
2020	do
2021	(( i = i + 1 ))
2022	if (( i == 1 ))
2023	then
2024	printf "\n\n >>> INPUT-file assignments:\n"
2025	fi
2026	printf "\n ${localin[$i]} : ${absnamein[$i]}"
2027	done
2028	(( i = 0 ))
2029	while (( i < iout ))
2030	do
2031	(( i = i + 1 ))
2032	if (( i == 1 ))
2033	then
2034	printf "\n\n >>> OUTPUT-file assignments:\n"
2035	fi
2036	printf "\n ${localout[$i]} : ${pathout[$i]}"
2037	done
2038	(( i = 0 ))
2039	while (( i < iic ))
2040	do
2041	(( i = i + 1 ))
2042	if (( i == 1 ))
2043	then
2044	printf "\n\n >>> INPUT-commands:\n"
2045	fi
2046	printf "\n ${in_command[$i]}"
2047	done
2048	(( i = 0 ))
2049	while (( i < ioc ))
2050	do
2051	(( i = i + 1 ))
2052	if (( i == 1 ))
2053	then
2054	printf "\n\n >>> OUTPUT-commands:\n"
2055	fi
2056	printf "\n ${out_command[$i]}"
2057	done
2058	fi
2059
2060
2061	# ABFRAGEN BEI AUFRUF AUF LOKALER MASCHINE
2062	if [[ $remotecall = false && $silent = false && $jobmo != BATCH ]]
2063	then
2064	antwort=dummy
2065	printf "\n\n"
2066	while [[ "$antwort" != y && "$antwort" != Y && "$antwort" != n && "$antwort" != N ]]
2067	do
2068	printf " >>> everything o.k. (y/n) ? "
2069	read antwort
2070	done
2071	if [[ $antwort = n \|\| $antwort = N ]]
2072	then
2073	locat=user_abort; (( iec = 0 )); exit
2074	fi
2075	if [[ $do_batch = true ]]
2076	then
2077	printf " >>> batch-job will be created and submitted"
2078	else
2079	if [[ $local_compile = false ]]
2080	then
2081	printf " >>> MRUN will now continue to execute on this machine"
2082	else
2083	printf " >>> a test compilation will now be carried out on this machine"
2084	fi
2085	fi
2086	fi
2087
2088
2089
2090
2091	# FALLS AUF DIESER MASCHINE GERECHNET WERDEN SOLL, WERDEN JETZT ENTSPRE-
2092	# CHENDE AKTIONEN DURCHGEFUEHRT
2093	if [[ $do_batch = false ]]
2094	then
2095
2096
2097	# TEMPORAEREN KATALOG ERZEUGEN
2098	mkdir -p $TEMPDIR
2099	chmod go+rx $TEMPDIR
2100	tmpcreate=true
2101
2102
2103	# SAEMTLICHE QUELLTEXT-DATEIEN BZW. AUSFUEHRBARES PROGRAMM IN
2104	# TEMPORAERES VERZEICHNIS KOPIEREN
2105	if [[ $do_compile = true ]]
2106	then
2107
2108	# ON NEC, COMPILATION IS DONE ON HOST CROSS VIA CROSS COMPILING
2109	# CREATE A TEMPORARY DIRECTORY ON THAT MACHINE (HOME MOUNTED VIA NFS)
2110	if [[ $localhost = nech ]]
2111	then
2112	TEMPDIR_COMPILE=$HOME/work/${usern}.$kennung
2113	if mkdir -p $TEMPDIR_COMPILE
2114	then
2115	printf "\n *** \"$TEMPDIR_COMPILE\" "
2116	printf "\n is generated as temporary directory for cross compiling\n"
2117	else
2118	printf "\n +++ creating directory \"$TEMPDIR_COMPILE\" "
2119	printf "\n needed for cross compilation failed"
2120	locat=compile
2121	exit
2122	fi
2123	else
2124	TEMPDIR_COMPILE=$TEMPDIR
2125	fi
2126
2127
2128	# PFADNAMEN FUER DAS MAKE-DEPOSITORY ERMITTELN
2129	line=""
2130	grep "%depository_path" $config_file > tmp_mrun
2131	while read line
2132	do
2133	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
2134	then
2135	if [[ "$(echo $line \| cut -d" " -s -f3)" = "" ]]
2136	then
2137	global_depository_path=`echo $line \| cut -d" " -s -f2`
2138	fi
2139	fi
2140	done < tmp_mrun
2141
2142	line=""
2143	grep " $localhost" $config_file \| grep "%depository_path" > tmp_mrun
2144	while read line
2145	do
2146	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
2147	then
2148	local_depository_path=`echo $line \| cut -d" " -s -f2`
2149	fi
2150	done < tmp_mrun
2151
2152	if [[ "$local_depository_path" = "" ]]
2153	then
2154	if [[ "$global_depository_path" != "" ]]
2155	then
2156	local_depository_path=$global_depository_path
2157	else
2158	printf "\n\n +++ no depository path found in configuration file"
2159	printf "\n for local host \"$localhost\" "
2160	printf "\n please set \"\%depository_path\" in configuration file\n"
2161	locat=config_file; exit
2162	fi
2163	fi
2164	eval local_depository_path=$local_depository_path
2165
2166	basename=`print $mainprog \| cut -f1 -d"."`
2167	eval make_depository=${local_depository_path}/${basename}_current_version.tar
2168	if [[ ! -f $make_depository ]]
2169	then
2170	printf "\n"
2171	printf "\n *** WARNING: make depository \"$make_depository\" not found"
2172	printf "\n \"make\" will fail, if the Makefile or other source files are missing\n"
2173	else
2174	cp $make_depository $TEMPDIR_COMPILE
2175	cd $TEMPDIR_COMPILE
2176	tar -xf $make_depository > /dev/null 2>&1
2177	cd - > /dev/null
2178	fi
2179
2180	cp SOURCES_FOR_RUN_$fname/* $TEMPDIR_COMPILE
2181
2182	# FALLS USER-INTERFACE VORHANDEN UND AUF DATEI MIT ANDEREM NAMEN
2183	# ALS user_interface.f90 LIEGT, DIESEN GEAENDERTEN NAMEN INS
2184	# MAKEFILE EINTRAGEN
2185	cd $TEMPDIR_COMPILE
2186	interface_file=`grep -l "END SUBROUTINE user_parin" $source_list`
2187	if [[ "$interface_file" != "" ]]
2188	then
2189	interface_file=`echo $interface_file \| cut -d"." -f1`
2190	mv Makefile Makefile_old
2191	sed "s/user_interface/$interface_file/g" Makefile_old > Makefile
2192	fi
2193	cd - > /dev/null
2194	else
2195	cp $executable ${TEMPDIR}/a.out
2196	fi
2197
2198
2199	# WECHSEL IN TEMPORAEREN KATALOG
2200	cd $TEMPDIR
2201	printf "\n *** changed to temporary directory: $TEMPDIR"
2202
2203
2204	# OUTPUT-DATEI-VERBINDUNGEN AUF TEMPORAERER DATEI ABLEGEN
2205	# DIESE DATEI KANN VON SPAETER AUFZURUFENDEN BENUTZERPROZEDUREN GELESEN
2206	# WERDEN, UM ZU LOKALEN DATEINAMEN GEHOERENDE PERMANENTE NAMEN ZU
2207	# ERMITTELN
2208	(( i = 0 ))
2209	while (( i < iout ))
2210	do
2211	(( i = i + 1 ))
2212	if [[ "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = tra \|\| "${actionout[$i]}" = trpe ]]
2213	then
2214	printf "${localout[$i]} ${actionout[$i]}\n${pathout[$i]}\n${localhost}_${fname}${endout[$i]}\n" >> OUTPUT_FILE_CONNECTIONS
2215	else
2216	printf "${localout[$i]} ${actionout[$i]}\n${pathout[$i]}\n${frelout[$i]}\n" >> OUTPUT_FILE_CONNECTIONS
2217	fi
2218	done
2219
2220
2221	# EVTL. UEBERSETZUNGSAKTIONEN STARTEN
2222	if [[ $do_compile = true ]]
2223	then
2224
2225
2226	# COMPILING WITH MAKE (ON NEC COMPILER IS CALLED ON HOST CROSS)
2227	printf "\n\n\n *** compilation starts \n$striche\n"
2228	printf " *** compilation with make using following options:\n"
2229	printf " compilername: $compiler_name\n"
2230	printf " options: $fopts\n"
2231	printf " preprocessor-directives: $cpp_options \n"
2232	printf " linker-options: $lopts \n"
2233	printf " source code files: $source_list \n"
2234
2235	if [[ $localhost = nech ]]
2236	then
2237	ssh 136.172.44.192 -l $usern ". /SX/opt/etc/initsx.sh; cd \$HOME/work/${usern}.$kennung; sxmake -f Makefile PROG=a.out F90=$compiler_name COPT=\"$cpp_options\" F90FLAGS=\"$fopts\" LDFLAGS=\"$lopts\" "
2238	cp $TEMPDIR_COMPILE/a.out .
2239	[[ $? != 0 ]] && compile_error=true
2240	rm -rf $TEMPDIR_COMPILE
2241	else
2242	[[ $localhost = lctit ]] && export LM_LICENSE_FILE=27050@tggls
2243	make -f Makefile PROG=a.out F90=$compiler_name COPT="$cpp_options" F90FLAGS="$fopts" LDFLAGS="$lopts"
2244	fi
2245
2246	if [[ $? != 0 \|\| "$compile_error" = true \|\| "$module_compile_error" = true ]]
2247	then
2248	printf "\n +++ error occured while compiling or linking"
2249	locat=compile
2250
2251	# WORKAROUND: REMOVE IF LATER, BUT KEEP THE EXIT!
2252	if [[ $localhost != lcsgib && $localhost != lcsgih ]]
2253	then
2254	exit
2255	fi
2256	else
2257	printf "$striche\n *** compilation finished \n"
2258	fi
2259	fi
2260
2261
2262	# FALLS NUR TESTWEISE KOMPILIERT WERDEN SOLLTE, IST MRUN JETZT FERTIG
2263	if [[ $local_compile = true ]]
2264	then
2265	cd $HOME
2266	rm -rf $TEMPDIR
2267	locat=local_compile; exit
2268	fi
2269
2270
2271	# BEREITSTELLEN DER INPUT-DATEIEN
2272	# SCHLEIFE UEBER ALLE VOM BENUTZER ANGEGEBENEN DATEIEN
2273	(( i = 0 ))
2274	while (( i < iin ))
2275	do
2276	(( i = i + 1 ))
2277	if (( i == 1 ))
2278	then
2279	printf "\n\n *** providing INPUT-files:\n$striche"
2280	fi
2281
2282
2283	# OPTIONALE DATEIEN BEI NICHTVORHANDENSEIN UEBERGEHEN
2284	if [[ "${transin[$i]}" = unavailable ]]
2285	then
2286	if [[ "${extin[$i]}" = "" \|\| "${extin[$i]}" = " " ]]
2287	then
2288	printf "\n +++ WARNING: input file \"${pathin[$i]}/${afname}${endin[$i]}\" "
2289	printf "\n is not available!"
2290	else
2291	printf "\n +++ WARNING: input file \"${pathin[$i]}/${afname}${endin[$i]}.${extin[$i]}\" "
2292	printf "\n is not available!"
2293	fi
2294	continue
2295	fi
2296
2297	# PRUEFEN, OB EINZELDATEI ODER DATEI PRO PROZESSOR
2298	files_for_pes=false; datentyp=file
2299	if [[ "${actionin[$i]}" = pe && -n $numprocs ]]
2300	then
2301	files_for_pes=true; datentyp=directory
2302	actionin[$i]=""
2303	elif [[ "${actionin[$i]}" = pe && ! -n $numprocs ]]
2304	then
2305	actionin[$i]=""
2306	elif [[ "${actionin[$i]}" = arpe && -n $numprocs ]]
2307	then
2308	files_for_pes=true; datentyp=directory
2309	actionin[$i]="ar"
2310	elif [[ "${actionin[$i]}" = arpe && ! -n $numprocs ]]
2311	then
2312	actionin[$i]="ar"
2313	elif [[ "${actionin[$i]}" = flpe && -n $numprocs ]]
2314	then
2315	files_for_pes=true; datentyp=directory
2316	actionin[$i]="fl"
2317	elif [[ "${actionin[$i]}" = flpe && ! -n $numprocs ]]
2318	then
2319	actionin[$i]="fl"
2320	fi
2321
2322	if [[ $files_for_pes = true ]]
2323	then
2324	printf "\n >>> INPUT: ${absnamein[$i]}/.... to ${localin[$i]}"
2325	else
2326	printf "\n >>> INPUT: ${absnamein[$i]} to ${localin[$i]}"
2327	fi
2328
2329	# INPUT-DATEI FUER EINEN FORTSETZUNGSLAUF. ES WIRD GEPRUEFT,
2330	# OB DIESE DATEI NOCH AUF DEM TEMPORAEREN DATENKATALOG VORHANDEN
2331	# IST. FALLS NICHT, WIRD VERSUCHT, SIE ANSCHLIESSEND VOM ARCHIV-
2332	# SERVER ZU HOLEN
2333	if [[ "${actionin[$i]}" = fl ]]
2334	then
2335	printf "\n $datentyp will be fetched from temporary directory \"${tmp_data_catalog}\" !"
2336	if [[ $files_for_pes = false ]]
2337	then
2338	if [[ -f "$tmp_data_catalog/${frelin[$i]}" ]]
2339	then
2340	ln $tmp_data_catalog/${frelin[$i]} ${localin[$i]}
2341	got_tmp[$i]=true
2342	elif [[ -f "$WORK/${frelin[$i]}" && $ignore_archive_error = true ]]
2343	then
2344	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" !"
2345	printf "\n *** trying to use backup copy in \"$WORK\" "
2346	cp $WORK/${frelin[$i]} ${localin[$i]}
2347	else
2348	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" "
2349	printf "\n or \"$tmp_data_catalog\" does not exist!"
2350	printf "\n *** trying to get copy from archive"
2351	actionin[$i]=ar
2352	fi
2353	else
2354	if [[ -d "$tmp_data_catalog/${frelin[$i]}" ]]
2355	then
2356	mkdir ${localin[$i]}
2357	cd $tmp_data_catalog/${frelin[$i]}
2358	for file in $(ls *)
2359	do
2360	ln $file $TEMPDIR/${localin[$i]}
2361	done
2362	cd $TEMPDIR
2363	got_tmp[$i]=true
2364	elif [[ -d "$WORK/${frelin[$i]}" && $ignore_archive_error = true ]]
2365	then
2366	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" !"
2367	printf "\n *** trying to use backup copy in \"$WORK\" "
2368	cp -r $WORK/${frelin[$i]} ${localin[$i]}
2369	else
2370	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" "
2371	printf "\n or \"$tmp_data_catalog\" does not exist!"
2372	printf "\n *** trying to get copy from archive"
2373	actionin[$i]=ar
2374	fi
2375	fi
2376	fi
2377
2378
2379	# DATEI LIEGT AUF ARCHIV-SERVER
2380	if [[ "${actionin[$i]}" = ar ]]
2381	then
2382
2383	if [[ $files_for_pes = false ]]
2384	then
2385	printf "\n file will be restored from archive-system ($archive_system)!"
2386	else
2387	printf "\n directory will be restored from archive-system ($archive_system)!"
2388	fi
2389
2390	file_restored=false
2391
2392	if [[ $archive_system = asterix ]]
2393	then
2394	do_stagein=true
2395	(( stagein_anz = 0 ))
2396	while [[ $do_stagein = true ]]
2397	do
2398	if [[ $files_for_pes = false ]]
2399	then
2400	stagein -O ${frelin[$i]} > STAGEIN_OUTPUT
2401	else
2402	stagein -t -O ${frelin[$i]} > STAGEIN_OUTPUT
2403	fi
2404	cat STAGEIN_OUTPUT
2405	if [[ $(grep -c "st.msg:i24" STAGEIN_OUTPUT) != 0 ]]
2406	then
2407	file_restored=true
2408	do_stagein=false
2409	else
2410	(( stagein_anz = stagein_anz + 1 ))
2411	if (( stagein_anz == 10 ))
2412	then
2413	printf "\n +++ stagein stoped after 10 tries"
2414	locat=stage
2415	exit
2416	fi
2417	printf "\n +++ restoring from archive failed, trying again:"
2418	sleep 900
2419	fi
2420	done
2421	elif [[ $archive_system = DMF ]]
2422	then
2423	if [[ $files_for_pes = false ]]
2424	then
2425	printf "\n +++ restoring of single files impossible with $archive_system !\n"
2426	locat=DMF
2427	exit
2428	else
2429	find $ARCHIVE/${frelin[$i]} -type m -print \| dmget
2430	cp -r $ARCHIVE/${frelin[$i]} $PWD
2431	file_restored=true
2432	fi
2433	elif [[ $archive_system = tivoli ]]
2434	then
2435	if [[ $files_for_pes = false ]]
2436	then
2437	if [[ $localhost = ibmh ]]
2438	then
2439	ssh $usern@hdata.hlrn.de "cp $PERM/${frelin[$i]} $PWD"
2440	else
2441	ssh $usern@bdata.hlrn.de "cp $PERM/${frelin[$i]} $PWD"
2442	fi
2443	else
2444	(( inode = 0 ))
2445	while (( inode < nodes ))
2446	do
2447	if [[ $localhost = ibmh ]]
2448	then
2449	ssh $usern@hdata.hlrn.de "cd $PWD; tar xf $PERM/${frelin[$i]}/${frelin[$i]}.node_$inode.tar"
2450	else
2451	ssh $usern@bdata.hlrn.de "cd $PWD; tar xf $PERM/${frelin[$i]}/${frelin[$i]}.node_$inode.tar"
2452	fi
2453	(( inode = inode + 1 ))
2454	done
2455	fi
2456	file_restored=true
2457	elif [[ $archive_system = ut ]]
2458	then
2459	if [[ $files_for_pes = false ]]
2460	then
2461	cp $UT/${frelin[$i]} .
2462	else
2463	(( inode = 0 ))
2464	while (( inode < nodes ))
2465	do
2466	tar xf $UT/${frelin[$i]}/${frelin[$i]}.node_$inode.tar
2467	(( inode = inode + 1 ))
2468	done
2469	fi
2470	file_restored=true
2471	else
2472	printf "\n +++ archive_system=\"$archive_system\" restore impossible!"
2473	locat=rearchive
2474	exit
2475	fi
2476
2477	if [[ $file_restored = true ]]
2478	then
2479
2480	# DATEI AUCH AUF TEMPORAERES DATENVERZEICHNIS LEGEN, DAMIT
2481	# SIE BEI WEITEREN ZUGRIFFEN NOCH VORHANDEN IST
2482	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog; chmod g+rx $tmp_data_catalog
2483	if [[ $files_for_pes = false ]]
2484	then
2485	ln -f ${frelin[$i]} $tmp_data_catalog/${frelin[$i]}
2486	else
2487	mkdir $tmp_data_catalog/${frelin[$i]}
2488	ln -f ${frelin[$i]}/* $tmp_data_catalog/${frelin[$i]}
2489	fi
2490	got_tmp[$i]=true
2491
2492	# DATEI UNTER LOKALEM NAMEN ZUR VERFUEGUNG STELLEN
2493	mv ${frelin[$i]} ${localin[$i]}
2494
2495	fi
2496	fi
2497
2498
2499	# DATEI LIEGT IM VOM BENUTZER ANGEGEBENEN VERZEICHNIS
2500	if [[ "${actionin[$i]}" = "" \|\| "${actionin[$i]}" = "di" \|\| "${actionin[$i]}" = "npe" ]]
2501	then
2502
2503	if [[ "${actionin[$i]}" = "npe" && -n $numprocs ]]
2504	then
2505
2506	# DATEI WIRD FUER DIE PROZESSOREN EINES PARALLERECHNERS BEREITGESTELLT
2507	printf "\n file will be provided for $numprocs processors"
2508	mkdir ${localin[$i]}
2509	ival=$numprocs
2510	(( ii = 0 ))
2511	while (( ii <= ival-1 ))
2512	do
2513	if (( ii < 10 ))
2514	then
2515	cp ${absnamein[$i]} ${localin[$i]}/_000$ii
2516	elif (( ii < 100 ))
2517	then
2518	cp ${absnamein[$i]} ${localin[$i]}/_00$ii
2519	elif (( ii < 1000 ))
2520	then
2521	cp ${absnamein[$i]} ${localin[$i]}/_0$ii
2522	else
2523	cp ${absnamein[$i]} ${localin[$i]}/_$ii
2524	fi
2525	(( ii = ii + 1 ))
2526	done
2527
2528	else
2529
2530	if [[ $files_for_pes = true ]]
2531	then
2532
2533	# DIE DEN PROZESSOREN EINES PARALLELRECHNERS ZUGEHOERIGEN
2534	# DATEIEN WERDEN BEREITGESTELLT, INDEM ZUERST DER GESAMTE
2535	# KATALOGINHALT KOPIERT UND DANN DIE EINZELNEN DATEIEN
2536	# PER MOVE UMBENANNT WERDEN
2537	printf "\n providing $numprocs files for the respective processors"
2538	mkdir ${localin[$i]}
2539	cp -r ${absnamein[$i]}/* ${localin[$i]}
2540
2541	else
2542	# BEREITSTELLUNG AUF EINPROZESSORRECHNERN
2543	cp ${absnamein[$i]} ${localin[$i]}
2544	fi
2545	fi
2546	fi
2547
2548	done
2549	if (( i != 0 ))
2550	then
2551	printf "\n$striche\n *** all INPUT-files provided \n"
2552	fi
2553
2554
2555	# NAMELIST-DATEI MIT WERTEN VON ENVIRONMENT-VARIABLEN ERZEUGEN (ZU
2556	# LESEN VON PALM)
2557	cat > ENVPAR << %%END%%
2558	&envpar run_identifier = '$fname', host = '$localhost',
2559	write_binary = '$write_binary', tasks_per_node = $tasks_per_node,
2560	maximum_cpu_time_allowed = ${cpumax}.,
2561	revision = '$global_revision' /
2562
2563	%%END%%
2564
2565
2566	# EVENTUELLE INPUT-KOMMANDOS ABARBEITEN
2567	(( i = 0 ))
2568	while (( i < iic ))
2569	do
2570	(( i = i + 1 ))
2571	if (( i == 1 ))
2572	then
2573	printf "\n\n *** execution of INPUT-commands:\n$striche"
2574	fi
2575	printf "\n >>> ${in_command[$i]}"
2576	eval ${in_command[$i]}
2577	if (( i == iic ))
2578	then
2579	printf "\n$striche\n"
2580	fi
2581	done
2582
2583
2584	# VERBLEIBENDE CPU-ZEIT BERECHNEN
2585	cpurest=${cpumax}.
2586
2587
2588	# PROGRAMMSTART
2589	printf "\n\n *** execution starts in directory\n \"`pwd`\"\n$striche\n"
2590	PATH=$PATH:$TEMPDIR
2591
2592	if [[ "$cond1" = debug \|\| "$cond2" = debug ]]
2593	then
2594	if [[ "$ENVIRONMENT" = BATCH ]]
2595	then
2596	printf "\n +++ debug is allowed in interactive mode only"
2597	locat=debug
2598	exit
2599	fi
2600	if [[ $localhost = decalpha ]]
2601	then
2602	dxladebug a.out
2603	elif [[ $localhost = ibmb \|\| $localhost = ibmh ]]
2604	then
2605
2606	# SETUP THE IBM MPI ENVIRONMENT
2607	export MP_SHARED_MEMORY=yes
2608	export AIXTHREADS_SCOPE=S
2609	export OMP_NUM_THREADS=$threads_per_task
2610	export AUTHSTATE=files
2611	export XLFRTEOPTS="nlwidth=132:err_recovery=no" # RECORD-LENGTH OF NAMELIST-OUTPUT
2612
2613	# FOLLOWING OPTIONS ARE MANDATORY FOR TOTALVIEW
2614	export MP_ADAPTER_USE=shared
2615	export MP_CPU_USE=multiple
2616	export MP_TIMEOUT=1200
2617
2618	unset MP_TASK_AFFINITY
2619
2620	# SO FAR, TOTALVIEW NEEDS HOSTFILE MECHANISM FOR EXECUTION
2621	#(( ii = 1 ))
2622	#while (( ii <= $numprocs ))
2623	#do
2624	# echo $localhost_realname >> hostfile
2625	# (( ii = ii + 1 ))
2626	#done
2627	#export MP_HOSTFILE=hostfile
2628
2629	if [[ "$LOADLBATCH" = yes ]]
2630	then
2631	totalview poe a.out $ROPTS
2632	else
2633	echo totalview poe -a a.out -procs $numprocs -rmpool 0 -nodes 1 $ROPTS
2634	export TVDSVRLAUNCHCMD=ssh
2635	totalview poe -a a.out -procs $numprocs -rmpool 0 -nodes 1 $ROPTS
2636	fi
2637	else
2638	printf "\n +++ no debug available on \"$localhost\" "
2639	printf "\n or not implemented in mrun so far"
2640	locat=debug
2641	exit
2642	fi
2643	else
2644	if [[ -n $numprocs ]]
2645	then
2646
2647	# RUNNING THE PROGRAM ON PARALLEL MACHINES
2648	if [[ $(echo $host \| cut -c1-3) = ibm ]]
2649	then
2650	# SETUP THE IBM MPI ENVIRONMENT
2651	export MP_SHARED_MEMORY=yes
2652	export AIXTHREAD_SCOPE=S
2653	export OMP_NUM_THREADS=$threads_per_task
2654	export XLSMPOPTS="spins=0:yields=0:stack=20000000"
2655	export AUTHSTATE=files
2656	export XLFRTEOPTS="nlwidth=132:err_recovery=no" # RECORD-LENGTH OF NAMELIST-OUTPUT
2657	# export MP_PRINTENV=yes
2658
2659	# TUNING-VARIABLEN ZUR VERBESSERUNG DER KOMMUNIKATION
2660	# ZEIGEN ABER DERZEIT (SEP 04, FEDERATION) KAUM WIRKUNG
2661	export MP_WAIT_MODE=poll
2662	[[ $node_usage = not_shared ]] && export MP_SINGLE_THREAD=yes
2663	# export MP_EAGER_LIMIT=65535
2664
2665	# # TESTWEISE FUER TURBOMPI (JAN 05)
2666	# export MPJ_MTAB=128
2667	# export MPJ_ALLTOALL=1
2668	# export MPJ_ALLTOALLV=1
2669
2670	if [[ "$LOADLBATCH" = yes ]]
2671	then
2672	printf "\n--- Control: OMP_NUM_THREADS = \"$OMP_NUM_THREADS\" \n"
2673	if [[ "$cond1" = hpmcount \|\| "$cond2" = hpmcount ]]
2674	then
2675	/opt/optibm/HPM_2_4_1/bin/hpmcount a.out $ROPTS
2676	else
2677	poe ./a.out $ROPTS
2678	fi
2679	else
2680	if [[ $localhost = ibmb \|\| $localhost = ibmh \|\| $localhost = ibms ]]
2681	then
2682	poe a.out -procs $numprocs -nodes 1 -rmpool 0 $ROPTS
2683	elif [[ $localhost = ibmy ]]
2684	then
2685	if [[ -f $hostfile ]]
2686	then
2687	cp $hostfile hostfile
2688	else
2689	(( ii = 1 ))
2690	while (( ii <= $numprocs ))
2691	do
2692	echo $localhost_realname >> hostfile
2693	(( ii = ii + 1 ))
2694	done
2695	fi
2696	export MP_HOSTFILE=hostfile
2697	./a.out -procs $tasks_per_node $ROPTS
2698	else
2699	if [[ "$host_file" = "" ]]
2700	then
2701	printf "\n +++ no hostfile given in configuration file"
2702	locat=config_file
2703	exit
2704	else
2705	eval host_file=$host_file
2706	fi
2707	export MP_HOSTFILE=$host_file
2708	poe a.out -procs $numprocs -tasks_per_node $numprocs $ROPTS
2709	fi
2710	fi
2711	elif [[ $host = nech \|\| $host = neck ]]
2712	then
2713	(( ii = nodes ))
2714	if [[ $ii = 1 ]]
2715	then
2716	export F_ERRCNT=0 # acceptable number of errors before program is stopped
2717	export MPIPROGINF=YES
2718	# export F_TRACE=YES\|FMT1\|FMT2 # output of ftrace informations to job protocol
2719	echo "*** execution on single node with mpirun"
2720	mpirun -np $numprocs ./a.out $ROPTS
2721	else
2722	(( i = 0 ))
2723	while (( i < ii ))
2724	do
2725	echo "-h $i -p $tasks_per_node -e ./mpi_exec_shell" >> multinode_config
2726	(( i = i + 1 ))
2727	done
2728
2729	echo "#!/bin/sh" > mpi_exec_shell
2730	echo " " >> mpi_exec_shell
2731	echo "set -u" >> mpi_exec_shell
2732	echo "F_ERRCNT=0" >> mpi_exec_shell
2733	echo "MPIPROGINV=YES" >> mpi_exec_shell
2734	echo "OMP_NUM_THREADS=$threads_per_task" >> mpi_exec_shell
2735	echo "cpurest=$cpurest" >> mpi_exec_shell
2736	echo "fname=$fname" >> mpi_exec_shell
2737	echo "localhost=$localhost" >> mpi_exec_shell
2738	echo "return_addres=$return_addres" >> mpi_exec_shell
2739	echo "return_username=$return_username" >> mpi_exec_shell
2740	echo "tasks_per_node=$tasks_per_node" >> mpi_exec_shell
2741	echo "write_binary=$write_binary" >> mpi_exec_shell
2742	echo "use_seperate_pe_for_dvrp_output=$use_seperate_pe_for_dvrp_output" >> mpi_exec_shell
2743	echo " " >> mpi_exec_shell
2744	echo "export F_ERRCNT" >> mpi_exec_shell
2745	echo "export MPIPROGINV" >> mpi_exec_shell
2746	echo "export OMP_NUM_THREADS" >> mpi_exec_shell
2747	echo "export cpurest" >> mpi_exec_shell
2748	echo "export fname" >> mpi_exec_shell
2749	echo "export localhost" >> mpi_exec_shell
2750	echo "export return_addres" >> mpi_exec_shell
2751	echo "export return_username" >> mpi_exec_shell
2752	echo "export tasks_per_node" >> mpi_exec_shell
2753	echo "export write_binary" >> mpi_exec_shell
2754	echo "export use_seperate_pe_for_dvrp_output" >> mpi_exec_shell
2755	echo " " >> mpi_exec_shell
2756	echo "exec ./a.out" >> mpi_exec_shell
2757
2758	chmod u+x mpi_exec_shell
2759	export MPIPROGINF=YES
2760	mpirun -f multinode_config &
2761	wait
2762
2763	fi
2764	elif [[ $(echo $host \| cut -c1-2) = lc && $host != lctit ]]
2765	then
2766
2767	# COPY HOSTFILE FROM SOURCE DIRECTORY OR CREATE IT, IF IT
2768	# DOES NOT EXIST
2769	if [[ $host != lcsgih && $host != lcsgib ]]
2770	then
2771	if [[ -f $hostfile ]]
2772	then
2773	cp $hostfile hostfile
2774	else
2775	(( ii = 1 ))
2776	while (( ii <= $numprocs / $threads_per_task ))
2777	do
2778	echo $localhost_realname >> hostfile
2779	(( ii = ii + 1 ))
2780	done
2781	fi
2782	eval zeile=\"`head -n $ii hostfile`\"
2783	printf "\n *** running on: $zeile"
2784	fi
2785
2786	(( ii = $numprocs / $threads_per_task ))
2787	export OMP_NUM_THREADS=$threads_per_task
2788	echo "OMP_NUM_THREADS=$OMP_NUM_THREADS"
2789	if [[ $threads_per_task != 1 ]]
2790	then
2791	printf "\n threads per task: $threads_per_task"
2792	fi
2793	if [[ $run_coupled_model = false ]]
2794	then
2795	printf "\n\n"
2796	if [[ $host = lcsgih \|\| $host = lcsgib ]]
2797	then
2798	# mpirun -machinefile $PBS_NODEFILE -np $ii a.out $ROPTS
2799	ulimit -s 30000
2800	ulimit -a
2801	mpirun_rsh -hostfile $PBS_NODEFILE -np $ii OMP_NUM_THREADS=$OMP_NUM_THREADS palm $ROPTS
2802	# export MV2_NUM_PORTS=2
2803	# export MV2_CPU_MAPPING=0:1:2:3
2804	# mpiexec ./palm $ROPTS
2805	elif [[ $host = lcxt4 ]]
2806	then
2807	aprun -n $ii -N $tasks_per_node a.out $ROPTS
2808	else
2809	echo "no_coupling" > runfile_atmos
2810	mpiexec -machinefile hostfile -n $ii a.out < runfile_atmos $ROPTS
2811	fi
2812	else
2813	(( iii = ii / 2 ))
2814	echo "atmosphere_to_ocean" > runfile_atmos
2815	echo "ocean_to_atmosphere" > runfile_ocean
2816
2817	printf "\n coupled run ($iii atmosphere, $iii ocean)"
2818	printf "\n\n"
2819
2820	if [[ $host == lcxt4 ]]
2821	then
2822	aprun -n $iii -N $tasks_per_node a.out < runfile_atmos $ROPTS &
2823	aprun -n $iii -N $tasks_per_node a.out < runfile_ocean $ROPTS &
2824	else
2825
2826	# WORKAROUND BECAUSE mpiexec WITH -env option IS NOT AVAILABLE ON SOME SYSTEMS
2827	mpiexec -machinefile hostfile -n $iii a.out $ROPTS < runfile_atmos &
2828	mpiexec -machinefile hostfile -n $iii a.out $ROPTS < runfile_ocean &
2829	# mpiexec -machinefile hostfile -n $iii -env coupling_mode atmosphere_to_ocean a.out $ROPTS &
2830	# mpiexec -machinefile hostfile -n $iii -env coupling_mode ocean_to_atmosphere a.out $ROPTS &
2831	fi
2832	wait
2833	fi
2834
2835	# if [[ $scirocco = true ]]
2836	# then
2837	# mpiexec -machinefile hostfile -n $ii a.out $ROPTS
2838	# else
2839	# mpirun -machinefile hostfile -np $ii a.out $ROPTS
2840	# fi
2841
2842	elif [[ $host = decalpha ]]
2843	then
2844	dmpirun -np $numprocs a.out $ROPTS
2845	elif [[ $host = lctit ]]
2846	then
2847	export runfile=runfile.$kennung
2848
2849	echo "cd $PWD" > $runfile
2850	echo "export OMP_NUM_THREADS=$OMP_NUM_THREADS" >> $runfile
2851	echo "export cpurest=$cpurest" >> $runfile
2852	echo "export fname=$fname" >> $runfile
2853	echo "export localhost=$localhost" >> $runfile
2854	echo "export return_addres=$return_addres" >> $runfile
2855	echo "export return_username=$return_username" >> $runfile
2856	echo "export tasks_per_node=$tasks_per_node" >> $runfile
2857	echo "export write_binary=$write_binary" >> $runfile
2858	echo "export use_seperate_pe_for_dvrp_output=$use_seperate_pe_for_dvrp_output" >> $runfile
2859	echo "./a.out" >> $runfile
2860	chmod u+x $runfile
2861
2862	if [[ "$QUEUE" = interactive ]]
2863	then
2864	mpirun -np $numprocs a.out $ROPTS
2865	else
2866	(( mem_tsubame = $memory / 1024.0 ))
2867	echo "Memory for Tsubame for each process in GB:", $mem_tsubame
2868	# n1ge -fore -g 1S060156 -mpi $numprocs -mem 4 -N palm -q $queue a.out $ROPTS
2869	/n1ge/TITECH_GRID/tools/bin/n1ge -fore -g $group_number -mpi ${numprocs}:$tasks_per_node -mem $mem_tsubame -N palm -rt $minuten -q $queue a.out $ROPTS
2870	fi
2871
2872	rm $runfile
2873	else
2874	mpprun -n $numprocs a.out $ROPTS
2875	fi
2876	[[ $? != 0 ]] && execution_error=true
2877
2878
2879	# PERFORMANCE-AUSWERTUNG MIT APPRENTICE
2880	if [[ "$cond1" = apprentice \|\| "$cond2" = apprentice ]]
2881	then
2882	apprentice
2883	fi
2884	else
2885	a.out $ROPTS
2886	fi
2887	fi
2888	if [[ $? != 0 \|\| $execution_error = true ]]
2889	then
2890
2891	# ABBRUCH BEI LAUFZEITFEHLER
2892	# [[ ! ( "$cond1" = debug \|\| "$cond2" = debug ) ]] && cat aout_output*
2893	printf "\n +++ runtime error occured"
2894	locat=execution
2895	exit
2896	else
2897	# [[ ! ( "$cond1" = debug \|\| "$cond2" = debug ) ]] && cat aout_output*
2898	printf "\n$striche\n *** execution finished \n"
2899	fi
2900
2901
2902
2903	# EVENTUELLE OUTPUT-KOMMANDOS ABARBEITEN
2904	(( i = 0 ))
2905	while (( i < ioc ))
2906	do
2907	(( i = i + 1 ))
2908	if (( i == 1 ))
2909	then
2910	printf "\n\n *** execution of OUTPUT-commands:\n$striche"
2911	fi
2912	printf "\n >>> ${out_command[$i]}"
2913	eval ${out_command[$i]}
2914	if (( i == ioc ))
2915	then
2916	printf "\n$striche\n"
2917	fi
2918	done
2919
2920
2921	# EVTL. INHALT DES AKTUELLEN VERZEICHNISSES AUSGEBEN
2922	if [[ $do_trace = true ]]
2923	then
2924	printf "\n\n"
2925	ls -al
2926	fi
2927
2928
2929
2930	# OUTPUT-DATEIEN AN IHRE ZIELORTE KOPIEREN
2931	(( i = 0 ))
2932	while (( i < iout ))
2933	do
2934	(( i = i + 1 ))
2935	if (( i == 1 ))
2936	then
2937	printf "\n\n *** saving OUTPUT-files:\n$striche"
2938	fi
2939
2940	# PRUEFEN, OB EINZELDATEI ODER DATEI PRO PROZESSOR
2941	files_for_pes=false; filetyp=file
2942	if [[ "${actionout[$i]}" = pe && -n $numprocs ]]
2943	then
2944	files_for_pes=true; filetyp=directory
2945	actionout[$i]=""
2946	elif [[ "${actionout[$i]}" = pe && ! -n $numprocs ]]
2947	then
2948	actionout[$i]=""
2949	elif [[ "${actionout[$i]}" = arpe && -n $numprocs ]]
2950	then
2951	files_for_pes=true; filetyp=directory
2952	actionout[$i]="ar"
2953	elif [[ "${actionout[$i]}" = arpe && ! -n $numprocs ]]
2954	then
2955	actionout[$i]="ar"
2956	elif [[ "${actionout[$i]}" = flpe && -n $numprocs ]]
2957	then
2958	files_for_pes=true; filetyp=directory
2959	actionout[$i]="fl"
2960	elif [[ "${actionout[$i]}" = flpe && ! -n $numprocs ]]
2961	then
2962	actionout[$i]="fl"
2963	elif [[ "${actionout[$i]}" = trpe && -n $numprocs ]]
2964	then
2965	files_for_pes=true; filetyp=directory
2966	actionout[$i]="tr"
2967	elif [[ "${actionout[$i]}" = trpe && ! -n $numprocs ]]
2968	then
2969	actionout[$i]="tr"
2970	fi
2971
2972	if [[ ! -f ${localout[$i]} && $files_for_pes = false ]]
2973	then
2974	printf "\n +++ temporary OUTPUT-file ${localout[$i]} does not exist\n"
2975	elif [[ ! -f ${localout[$i]}/_0000 && $files_for_pes = true ]]
2976	then
2977	printf "\n +++ temporary OUTPUT-file ${localout[$i]}/.... does not exist\n"
2978	else
2979
2980
2981	# KOPIEREN PER FTP/SCP (IMMER IM BINAERMODUS, -M: FALLS ZIELKATALOG
2982	# NICHT VORHANDEN, WIRD VERSUCHT, IHN ANZULEGEN), ABER NUR BEI
2983	# REMOTE-RECHNUNGEN
2984	if [[ "${actionout[$i]}" = tr ]]
2985	then
2986	if [[ $localhost != $fromhost ]]
2987	then
2988	if [[ $files_for_pes = false ]]
2989	then
2990	cps=""
2991	cst=""
2992	else
2993	cps=-c
2994	cst="/"
2995	fi
2996	if [[ $localhost = ibmh \|\| $localhost = ibmb \|\| $localhost = nech ]]
2997	then
2998
2999	# TRANSFER IN EIGENSTAENDIGEM JOB
3000	# ZUERST KOPIE DER DATEI INS TEMPORAERE DATENVERZEICHNIS
3001	[[ ! -d $tmp_data_catalog/TRANSFER ]] && mkdir -p $tmp_data_catalog/TRANSFER
3002	file_to_transfer=${fname}_${localout[$i]}_to_transfer_$kennung
3003	if [[ $files_for_pes = false ]]
3004	then
3005	ln -f ${localout[$i]} $tmp_data_catalog/TRANSFER/$file_to_transfer
3006	else
3007	mkdir $tmp_data_catalog/TRANSFER/$file_to_transfer
3008	ln ${localout[$i]}/* $tmp_data_catalog/TRANSFER/$file_to_transfer
3009	fi
3010
3011	echo "set -x" > transfer_${localout[$i]}
3012	echo "cd $tmp_data_catalog/TRANSFER" >> transfer_${localout[$i]}
3013
3014	printf "\n >>> OUTPUT: ${localout[$i]}$cst by SCP in seperate job to"
3015	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}$cst"
3016	printf "\n or higher cycle\n"
3017	echo "batch_scp $cps -b -m -u $return_username $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
3018
3019	echo "[[ \$? = 0 ]] && rm $file_to_transfer" >> transfer_${localout[$i]}
3020
3021	if [[ $localhost = nech ]]
3022	then
3023	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 900 transfer_${localout[$i]}
3024	else
3025	if [[ "$LOGNAME" = b323013 ]]
3026	then
3027	subjob -v -q c1 -X 0 -m 1000 -t 900 -c $job_catalog transfer_${localout[$i]}
3028	else
3029	subjob -d -v -q c1 -X 0 -m 1000 -t 900 -c $job_catalog transfer_${localout[$i]}
3030	fi
3031	fi
3032
3033	else
3034
3035	# TRANSFER INNERHALB DIESES JOBS
3036	transfer_failed=false
3037	printf "\n >>> OUTPUT: ${localout[$i]}$cst by SCP to"
3038	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}$cst\n"
3039	batch_scp $cps -b -m -u $return_username $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
3040	[[ $? != 0 ]] && transfer_failed=true
3041
3042	# BEI FEHLGESCHLAGENEM TRANSFER SICHERUNGSKOPIE AUF
3043	# LOKALER MASCHINE ANLEGEN
3044	if [[ $transfer_failed = true ]]
3045	then
3046	printf " +++ transfer failed. Trying to save a copy on the local host under:\n"
3047	printf " ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung\n"
3048
3049	# ERSTMAL PRUEFEN, OB VERZEICHNIS EXISTIERT. GEGEBENENFALLS
3050	# ANLEGEN.
3051	eval local_catalog=${pathout[$i]}
3052	if [[ ! -d $local_catalog ]]
3053	then
3054	printf " *** local directory does not exist. Trying to create:\n"
3055	printf " $local_catalog \n"
3056	mkdir -p $local_catalog
3057	fi
3058	eval cp ${localout[$i]} ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung
3059	transfer_problems=true
3060	fi
3061	fi
3062	else
3063
3064	# WERTZUWEISUNG, SO DASS WEITER UNTEN NUR KOPIERT WIRD
3065	actionout[$i]=""
3066	fi
3067	fi
3068
3069
3070	# APPEND PER FTP/SCP (IMMER IM BINAERMODUS, -M: FALLS ZIELKATALOG
3071	# NICHT VORHANDEN, WIRD VERSUCHT, IHN ANZULEGEN), ABER NUR BEI
3072	# REMOTE-RECHNUNGEN
3073	if [[ "${actionout[$i]}" = tra ]]
3074	then
3075	if [[ $localhost != $fromhost ]]
3076	then
3077	if [[ $localhost = ibmh \|\| $localhost = ibmb \|\| $localhost = nech ]]
3078	then
3079
3080	# TRANSFER IN EIGENSTAENDIGEM JOB
3081	# ZUERST KOPIE DER DATEI INS TEMPORAERE DATENVERZEICHNIS
3082	[[ ! -d $tmp_data_catalog/TRANSFER ]] && mkdir -p $tmp_data_catalog/TRANSFER
3083	file_to_transfer=${fname}_${localout[$i]}_to_transfer_$kennung
3084	ln -f ${localout[$i]} $tmp_data_catalog/TRANSFER/$file_to_transfer
3085
3086	echo "set -x" > transfer_${localout[$i]}
3087	echo "cd $tmp_data_catalog/TRANSFER" >> transfer_${localout[$i]}
3088
3089	printf "\n >>> OUTPUT: ${localout[$i]} append by SCP in seperate job to"
3090	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}"
3091	printf "\n or higher cycle\n"
3092	echo "batch_scp -A -b -m -u $return_username $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
3093
3094	echo "[[ \$? = 0 ]] && rm $file_to_transfer" >> transfer_${localout[$i]}
3095
3096	if [[ $localhost = nech ]]
3097	then
3098	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 900 transfer_${localout[$i]}
3099	else
3100	if [[ $LOGNAME = b323013 ]]
3101	then
3102	subjob -v -q c1 -X 0 -m 1000 -t 900 -c $job_catalog transfer_${localout[$i]}
3103	else
3104	subjob -d -v -q c1 -X 0 -m 1000 -t 900 -c $job_catalog transfer_${localout[$i]}
3105	fi
3106	fi
3107
3108	else
3109
3110	# TRANSFER INNERHALB DIESES JOBS
3111	transfer_failed=false
3112	printf "\n >>> OUTPUT: ${localout[$i]} append by SCP to"
3113	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}\n"
3114	batch_scp -A -b -m -u $return_username $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
3115	[[ $? != 0 ]] && transfer_failed=true
3116
3117	# BEI FEHLGESCHLAGENEM TRANSFER SICHERUNGSKOPIE AUF
3118	# LOKALER MASCHINE ANLEGEN
3119	if [[ $transfer_failed = true ]]
3120	then
3121	printf " +++ transfer failed. Trying to save a copy on the local host under:\n"
3122	printf " ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung\n"
3123
3124	# ERSTMAL PRUEFEN, OB VERZEICHNIS EXISTIERT. GEGEBENENFALLS
3125	# ANLEGEN
3126	eval local_catalog=${pathout[$i]}
3127	if [[ ! -d $local_catalog ]]
3128	then
3129	printf " *** local directory does not exist. Trying to create:\n"
3130	printf " $local_catalog \n"
3131	mkdir -p $local_catalog
3132	fi
3133
3134	eval cp ${localout[$i]} ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung
3135	transfer_problems=true
3136	fi
3137	fi
3138	else
3139
3140	# WERTZUWEISUNG, SO DASS WEITER UNTEN NUR APPEND AUF
3141	# LOKALER MASCHINE DURCHGEFUEHRT WIRD
3142	actionout[$i]=a
3143	fi
3144	fi
3145
3146
3147	# OUTPUT-DATEI FUER EINEN FORTSETZUNGSLAUF. DATEI WIRD PER
3148	# LINK AUF DEN TEMPORAEREN DATENKATALOG GELEGT. OPTION -f WIRD
3149	# VERWENDET, FALLS DORT NOCH EINE DATEI GLEICHEN NAMENS VORHANDEN
3150	# SEIN SOLLTE. ANSCHLIESSEND WIRD SEINE ARCHIVIERUNG ANGESTOSSEN
3151	if [[ "${actionout[$i]}" = fl ]]
3152	then
3153	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
3154	chmod g+rx $tmp_data_catalog
3155	if [[ $files_for_pes = false ]]
3156	then
3157	printf "\n >>> OUTPUT: ${localout[$i]} to"
3158	printf "\n $tmp_data_catalog/${frelout[$i]} (temporary data catalog)\n"
3159	ln -f ${localout[$i]} $tmp_data_catalog/${frelout[$i]}
3160	else
3161	printf "\n >>> OUTPUT: ${localout[$i]}/.... to"
3162	printf "\n $tmp_data_catalog/${frelout[$i]} (temporary data catalog)\n"
3163	mkdir $tmp_data_catalog/${frelout[$i]}
3164	cd ${localout[$i]}
3165	for file in $(ls *)
3166	do
3167	ln -f $file $tmp_data_catalog/${frelout[$i]}
3168	done
3169	cd $TEMPDIR
3170	fi
3171
3172
3173	# ARCHIVIERUNGSJOB WIRD ERZEUGT UND ABGESCHICKT
3174	if [[ $store_on_archive_system = true ]]
3175	then
3176
3177	if [[ $archive_system = asterix ]]
3178	then
3179	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3180	if [[ $files_for_pes = false ]]
3181	then
3182	echo "stageout ${frelout[$i]} > STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3183	else
3184	echo "stageout -t ${frelout[$i]} > STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3185	fi
3186	echo "cat STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3187	echo "if [[ \$(grep -c \"st.msg:150\" STAGE_OUTPUT${i}_$kennung) != 0 ]]" >> archive_${frelout[$i]}
3188	echo "then" >> archive_${frelout[$i]}
3189	echo " do_stageout=false" >> archive_${frelout[$i]}
3190	echo "else" >> archive_${frelout[$i]}
3191	echo " echo \" +++ $filetyp ${frelout[$i]} could not be stored on archive-system\" " >> archive_${frelout[$i]}
3192	echo " cat /dev/null > ~/job_queue/ARCHIVE_ERROR_$fname" >> archive_${frelout[$i]}
3193	echo " cat STAGE_OUTPUT${i}_$kennung > ~/job_queue/archive_${frelout[$i]}_error" >> archive_${frelout[$i]}
3194	echo " echo \" *** $filetyp ${frelout[$i]} will be copied to \$WORK as backup\" " >> archive_${frelout[$i]}
3195	if [[ $files_for_pes = false ]]
3196	then
3197	echo " cp ${frelout[$i]} \$WORK" >> archive_${frelout[$i]}
3198	else
3199	echo " cp -r ${frelout[$i]} \$WORK/${frelout[$i]}" >> archive_${frelout[$i]}
3200	fi
3201	echo " echo \" *** $filetyp ${frelout[$i]} saved\" " >> archive_${frelout[$i]}
3202	echo "fi" >> archive_${frelout[$i]}
3203	echo "rm STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3204	elif [[ $archive_system = DMF ]]
3205	then
3206	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3207	if [[ $files_for_pes = false ]]
3208	then
3209	printf "\n +++ archiving of single files impossible with $archive_system !\n"
3210	locat=DMF
3211	exit
3212	else
3213	# FUER RECHNER IN JUELICH. DORT KOENNTEN AUCH
3214	# EINZELNE DATEIEN GESICHERT WERDEN (SPAETER KORR.)
3215	echo "rm -rf \$ARCHIVE/${frelout[$i]}" >> archive_${frelout[$i]}
3216	echo "cp -r ${frelout[$i]} \$ARCHIVE" >> archive_${frelout[$i]}
3217	fi
3218	elif [[ $archive_system = tivoli ]]
3219	then
3220	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3221	if [[ $files_for_pes = false ]]
3222	then
3223	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3224	echo "set -x" >> archive_${frelout[$i]}
3225	echo "rm -rf \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3226	echo "cp ${frelout[$i]} \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3227	else
3228
3229	echo "set -x" >> archive_${frelout[$i]}
3230	echo "rm -rf \$PERM/${frelout[$i]}/*" >> archive_${frelout[$i]}
3231	echo "[[ ! -d \$PERM/${frelout[$i]} ]] && mkdir $PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3232	cd $tmp_data_catalog
3233	all_files=`ls -1 ${frelout[$i]}/*`
3234	cd - > /dev/null
3235	(( inode = 0 ))
3236	(( tp1 = tasks_per_node + 1 ))
3237	while (( inode < nodes ))
3238	do
3239	# echo "*** all_files = \"$all_files\" "
3240	files=`echo $all_files \| cut -d" " -f1-$tasks_per_node`
3241	all_files=`echo $all_files \| cut -d" " -f$tp1-`
3242	# echo "*** tasks_per_node = \"$tasks_per_node\" "
3243	# echo "*** files = \"$files\" "
3244	# echo "*** all_files = \"$all_files\" "
3245	echo "tar cvf \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar $files" >> archive_${frelout[$i]}
3246	echo "dsmc incremental \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar" >> archive_${frelout[$i]}
3247	echo "dsmmigrate \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar" >> archive_${frelout[$i]}
3248	(( inode = inode + 1 ))
3249	done
3250	# echo "rm -rf \$PERM/${frelout[$i]}.tar" >> archive_${frelout[$i]}
3251	# echo "tar cvf \$PERM/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
3252	fi
3253	elif [[ $archive_system = ut ]]
3254	then
3255	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3256	if [[ $files_for_pes = false ]]
3257	then
3258	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3259	echo "set -x" >> archive_${frelout[$i]}
3260	echo "rm -rf \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3261	echo "cp ${frelout[$i]} \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3262	else
3263
3264	echo "set -x" >> archive_${frelout[$i]}
3265	echo "rm -rf \$UT/${frelout[$i]}/*" >> archive_${frelout[$i]}
3266	echo "[[ ! -d \$UT/${frelout[$i]} ]] && mkdir $UT/${frelout[$i]}" >> archive_${frelout[$i]}
3267	cd $tmp_data_catalog
3268	all_files=`ls -1 ${frelout[$i]}/*`
3269	cd - > /dev/null
3270	(( inode = 0 ))
3271	(( tp1 = tasks_per_node + 1 ))
3272	while (( inode < nodes ))
3273	do
3274	files=`echo $all_files \| cut -d" " -f1-$tasks_per_node`
3275	all_files=`echo $all_files \| cut -d" " -f$tp1-`
3276	echo "tar cvf \$UT/${frelout[$i]}/${frelout[$i]}.node_$inode.tar $files" >> archive_${frelout[$i]}
3277	(( inode = inode + 1 ))
3278	done
3279	fi
3280	elif [[ $archive_system = none ]]
3281	then
3282	printf " +++ archiving on $localhost not available!\n"
3283	fi
3284
3285	if [[ $archive_system != none ]]
3286	then
3287	if [[ $localhost = ibmh \|\| $localhost = ibmb ]]
3288	then
3289	# subjob -d -v -q cdata -X 0 -m 1000 -t 43200 -c $job_catalog archive_${frelout[$i]}
3290	subjob -v -q cdata -X 0 -m 1000 -t 43200 -c $job_catalog archive_${frelout[$i]}
3291	elif [[ $localhost = nech ]]
3292	then
3293	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 7200 archive_${frelout[$i]}
3294	fi
3295	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
3296	fi
3297	else
3298	printf " +++ caution: option -A is switched on. No archiving on $archive_system!\n"
3299	fi
3300
3301
3302	# LEERDATEI IM BENUTZERVERZEICHNIS ANLEGEN, DAMIT BEKANNT IST,
3303	# WIE DIE HOECHSTE ZYKLUSNUMMER AUF DEM ARCHIV-SYSTEM LAUTET
3304	if [[ $files_for_pes = false ]]
3305	then
3306	cat /dev/null > ${pathout[$i]}
3307	else
3308	mkdir -p ${pathout[$i]}
3309	fi
3310
3311	fi
3312
3313
3314	# KOPIEREN AUF LOKALER MASCHINE ZUM ARCHIV-SYSTEM
3315	# AUSSERDEM MUSS LEERDATEI ANGELEGT WERDEN, DAMIT BEKANNT IST,
3316	# WIE DIE HOECHSTE ZYKLUSNUMMER AUF DEM ARCHIV-SYSTEM LAUTET
3317	# FALLS IRGENDEINE (VON MEHREREN) ARCHIVIERUNGEN SCHIEF GEHT,
3318	# WIRD FLAG GESETZT UND BLEIBT AUCH BEI WEITEREN ORDNUNGS-
3319	# GEMAESSEN ARCHIVIERUNGEN GESETZT
3320	if [[ "${actionout[$i]}" = ar ]]
3321	then
3322	if [[ $files_for_pes = false ]]
3323	then
3324	printf "\n >>> OUTPUT: ${localout[$i]} to"
3325	printf "\n ${pathout[$i]}"
3326	printf "\n File will be copied to archive-system ($archive_system) !\n"
3327	else
3328	printf "\n >>> OUTPUT: ${localout[$i]}/_.... to"
3329	printf "\n ${pathout[$i]}"
3330	printf "\n Directory will be copied to archive-system ($archive_system) !\n"
3331	fi
3332	mv ${localout[$i]} ${frelout[$i]}
3333
3334	file_saved=false
3335
3336	if [[ $archive_system = asterix ]]
3337	then
3338	do_stageout=true
3339	(( stageout_anz = 0 ))
3340	while [[ $do_stageout = true ]]
3341	do
3342	if [[ $files_for_pes = false ]]
3343	then
3344	stageout ${frelout[$i]} > STAGE_OUTPUT
3345	else
3346	stageout -t ${frelout[$i]} > STAGE_OUTPUT
3347	fi
3348	cat STAGE_OUTPUT
3349	if [[ $(grep -c "st.msg:150" STAGE_OUTPUT) != 0 ]]
3350	then
3351	file_saved=true
3352	do_stageout=false
3353	else
3354	if [[ $files_for_pes = false ]]
3355	then
3356	printf "\n +++ file ${frelout[$i]} could not be saved on archive-system"
3357	else
3358	printf "\n +++ directory ${frelout[$i]} could not be saved on archive-system"
3359	fi
3360	(( stageout_anz = stageout_anz + 1 ))
3361	if (( stageout_anz == 10 ))
3362	then
3363	printf "\n +++ stoped after 10 unsuccessful tries!"
3364	archive_save=false
3365	do_stageout=false
3366	else
3367	printf "\n *** new try to store on archive after 15 min:"
3368	sleep 900
3369	fi
3370	fi
3371	done
3372	elif [[ $archive_system = DMF ]]
3373	then
3374	if [[ $files_for_pes = false ]]
3375	then
3376	printf "\n +++ archiving of single files impossible on $archive_system!\n"
3377	locat=DMF
3378	exit
3379	else
3380	rm -rf $ARCHIVE/${frelout[$i]}
3381	cp -r ${frelout[$i]} $ARCHIVE
3382	fi
3383	file_saved=true
3384	elif [[ $archive_system = tivoli ]]
3385	then
3386	# ARCHIVIERUNG NUR PER BATCH-JOB MOEGLICH
3387	# DATEI MUSS ZWISCHENZEITLICH INS TEMPORAERE DATENVERZEICHNIS
3388	# GELEGT WERDEN
3389	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
3390	chmod g+rx $tmp_data_catalog
3391	if [[ $files_for_pes = false ]]
3392	then
3393	ln -f ${frelout[$i]} $tmp_data_catalog/${frelout[$i]}
3394	else
3395	mkdir $tmp_data_catalog/${frelout[$i]}
3396	ln -f ${frelout[$i]}/* $tmp_data_catalog/${frelout[$i]}
3397	fi
3398
3399	# BATCH JOB GENERIEREN UND ABSCHICKEN; DATEI MUSS WIEDER
3400	# AUS TEMPORAEREM DATENVERZEICHNIS ENTFERNT WERDEN
3401	echo "cd $tmp_data_catalog" > archive_${frelout[$i]}
3402	if [[ $files_for_pes = false ]]
3403	then
3404	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3405	echo "rm -rf \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3406	echo "cp ${frelout[$i]} \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3407	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3408	else
3409	echo "rm -rf \$PERM/${frelout[$i]}.tar" >> archive_${frelout[$i]}
3410	echo "tar cvf \$PERM/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
3411	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3412	fi
3413
3414	subjob -v -d -q cdata -X 0 -m 1000 -t 43200 -c $job_catalog archive_${frelout[$i]}
3415	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
3416	file_saved=true
3417
3418	elif [[ $archive_system = ut ]]
3419	then
3420	# ARCHIVIERUNG NUR PER BATCH-JOB MOEGLICH
3421	# DATEI MUSS ZWISCHENZEITLICH INS TEMPORAERE DATENVERZEICHNIS
3422	# GELEGT WERDEN
3423	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
3424	chmod g+rx $tmp_data_catalog
3425	if [[ $files_for_pes = false ]]
3426	then
3427	ln -f ${frelout[$i]} $tmp_data_catalog/${frelout[$i]}
3428	else
3429	mkdir $tmp_data_catalog/${frelout[$i]}
3430	ln -f ${frelout[$i]}/* $tmp_data_catalog/${frelout[$i]}
3431	fi
3432
3433	# BATCH JOB GENERIEREN UND ABSCHICKEN; DATEI MUSS WIEDER
3434	# AUS TEMPORAEREM DATENVERZEICHNIS ENTFERNT WERDEN
3435	echo "cd $tmp_data_catalog" > archive_${frelout[$i]}
3436	if [[ $files_for_pes = false ]]
3437	then
3438	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3439	echo "rm -rf \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3440	echo "cp ${frelout[$i]} \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3441	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3442	else
3443	echo "rm -rf \$UT/${frelout[$i]}.tar" >> archive_${frelout[$i]}
3444	echo "tar cvf \$UT/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
3445	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3446	fi
3447
3448	subjob -v -c /pf/b/$usern/job_queue -d -q pp -X 0 -m 1000 -t 7200 archive_${frelout[$i]}
3449	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
3450	file_saved=true
3451
3452	else
3453	printf "\n +++ archive_system=\"$archive_system\" archiving impossible!"
3454	archive_save=false
3455	fi
3456	if [[ $file_saved = true ]]
3457	then
3458	if [[ $files_for_pes = false ]]
3459	then
3460	cat /dev/null > ${pathout[$i]}
3461	else
3462	mkdir -p ${pathout[$i]}
3463	fi
3464	fi
3465	fi
3466
3467	# APPEND AUF LOKALER MASCHINE
3468	if [[ "${actionout[$i]}" = "a" ]]
3469	then
3470	printf "\n >>> OUTPUT: ${localout[$i]} append to ${pathout[$i]}\n"
3471	cat ${localout[$i]} >> ${pathout[$i]}
3472	fi
3473
3474	# KOPIEREN AUF LOKALER MASCHINE
3475	# ES MUSS KOPIERT WERDEN, DA MOVE NICHT UEBER FILESYSTEM HINAUS MOEGLICH
3476	if [[ "${actionout[$i]}" = "" && $files_for_pes = false ]]
3477	then
3478
3479	# KOPIEREN AUF EINPROZESSORMASCHINE
3480	if [[ "${extout[$i]}" != " " && "${extout[$i]}" != "" ]]
3481	then
3482	printf "\n >>> OUTPUT: ${localout[$i]} to ${pathout[$i]}.${extout[$i]}\n"
3483	if [[ $link_local_output = true ]]
3484	then
3485	printf " using ln -f\n"
3486	ln -f ${localout[$i]} ${pathout[$i]}.${extout[$i]}
3487	fi
3488	# If "ln -f" fails of if "$link_local_output = false" do a normal "cp"
3489	if [[ ! -f "${pathout[$i]}.${extout[$i]}" ]]
3490	then
3491	if [[ $link_local_output = true ]]
3492	then
3493	printf " ln failed, using cp...\n"
3494	fi
3495	cp ${localout[$i]} ${pathout[$i]}.${extout[$i]}
3496	fi
3497	else
3498	printf "\n >>> OUTPUT: ${localout[$i]} to ${pathout[$i]}\n"
3499	if [[ $link_local_output = true ]]
3500	then
3501	printf " using ln -f\n"
3502	ln -f ${localout[$i]} ${pathout[$i]}
3503	fi
3504	# If "ln -f" fails of if "$link_local_output = false" do a normal "cp"
3505	if [[ ! -f "${pathout[$i]}" ]]
3506	then
3507	if [[ $link_local_output = true ]]
3508	then
3509	printf " ln failed, using cp...\n"
3510	fi
3511	cp ${localout[$i]} ${pathout[$i]}
3512	fi
3513	fi
3514
3515	elif [[ "${actionout[$i]}" = "" && $files_for_pes = true ]]
3516	then
3517
3518	# DIE DEN PROZESSOREN EINES PARALLELRECHNERS ZUGEHOERIGEN
3519	# DATEIEN WERDEN ERST IN EINEM KATALOG GESAMMELT UND DIESER
3520	# WIRD DANN KOPIERT
3521	# PER MOVE UMBENANNT WERDEN
3522	printf "\n >>> OUTPUT: ${localout[$i]}/_.... to ${pathout[$i]}\n"
3523	if [[ $link_local_output = true ]]
3524	then
3525	printf " using ln -f\n"
3526	mkdir ${pathout[$i]}
3527	cd ${localout[$i]}
3528	for file in $(ls *)
3529	do
3530	ln -f $file ${pathout[$i]}
3531	done
3532	cd $TEMPDIR
3533	fi
3534	# If "ln -f" fails of if "$link_local_output = false" do a normal "cp -r"
3535	if [[ ! -f "${pathout[$i]}/_0000" ]]
3536	then
3537	if [[ $link_local_output = true ]]
3538	then
3539	printf " ln failed for .../_0000, using cp...\n"
3540	fi
3541	cp -r ${localout[$i]} ${pathout[$i]}
3542	fi
3543
3544	fi
3545	fi
3546	done
3547	if (( i != 0 ))
3548	then
3549	if [[ $transfer_problems = true ]]
3550	then
3551	printf "\n$striche\n *** OUTPUT-files saved"
3552	printf "\n +++ WARNING: some data transfers failed! \n"
3553	else
3554	printf "\n$striche\n *** all OUTPUT-files saved \n"
3555	fi
3556	fi
3557
3558
3559	# EVENTUELL FOLGEJOB STARTEN
3560	# DATEI CONTINUE_RUN MUSS VOM BENUTZERPROGRAMM AUS ERZEUGT WERDEN
3561	if [[ -f CONTINUE_RUN ]]
3562	then
3563
3564	if [[ $archive_save = true ]]
3565	then
3566
3567	# ZUERST IN MRUN-AUFRUF OPTIONEN FUER FORTSETZUNGSLAUF, FUER
3568	# STILLES ABARBEITEN (OHNE INTERAKTIVE RUECKFAGEN) UND FUER
3569	# BATCH-BETRIEB (NUR WICHTIG, FALLS BATCH AUF LOKALER MASCHINE
3570	# DURCHGEFUEHRT WERDEN SOLL) EINFUEGEN, FALLS NICHT BEREITS VOR-
3571	# HANDEN
3572	[[ $(echo $mc \| grep -c "\-C") = 0 ]] && mc="$mc -C"
3573	[[ $(echo $mc \| grep -c "\-v") = 0 ]] && mc="$mc -v"
3574	[[ $(echo $mc \| grep -c "\-b") = 0 ]] && mc="$mc -b"
3575	if [[ $(echo $mc \| grep -c "#") != 0 ]]
3576	then
3577	mc=`echo $mc \| sed 's/#/f/g'`
3578	fi
3579
3580
3581	# JOB STARTEN
3582	printf "\n\n *** initiating restart-run on \"$return_addres\" using command:\n"
3583	echo " $mc"
3584	printf "\n$striche\n"
3585	if [[ $localhost != $fromhost ]]
3586	then
3587
3588	if [[ $localhost = nech \|\| $localhost = ibmb \|\| $localhost = ibmh \|\| $localhost = ibms \|\| $localhost = lctit ]]
3589	then
3590	echo "*** ssh will be used to initiate restart-runs!"
3591	echo " return_addres=\"$return_addres\" "
3592	echo " return_username=\"$return_username\" "
3593	if [[ $return_addres = 172.20.25.41 ]]
3594	then
3595	# WORKAROUND AUF SCIROCCO AM TIT
3596	print "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc " \| ssh $return_addres -l $return_username
3597	else
3598	ssh $return_addres -l $return_username "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc "
3599	fi
3600	else
3601	printf "\n +++ no restart mechanism available for host \"$localhost\" "
3602	locat=restart; exit
3603	fi
3604
3605	# WARTEN, DAMIT SICH RESTART JOB IN QUEUE EINREIHEN KANN, BEVOR
3606	# DER AKTUELLE JOB ENDET
3607	sleep 30
3608
3609	else
3610
3611	# BEI RECHNUNGEN AUF LOKALER MASCHINE KANN MRUN DIREKT AUFGE-
3612	# RUFEN WERDEN, AUSSER AUF lcfimm
3613	cd $LOCAL_PWD
3614	if [[ $localhost = lcfimm ]]
3615	then
3616	ssh $return_addres -l $return_username "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc "
3617	else
3618	eval $mc # ' MUESSEN AUSGEWERTET WERDEN
3619	fi
3620	cd - > /dev/null
3621	fi
3622	printf "\n$striche\n *** restart-run initiated \n"
3623
3624
3625	# EVENTUELL INPUT-DATEIEN, DIE VON TEMPORAEREM DATENVERZEICHNIS
3626	# GEHOLT WORDEN SIND, LOESCHEN
3627	(( i = 0 ))
3628	while (( i < iin ))
3629	do
3630	(( i = i + 1 ))
3631	if [[ "${got_tmp[$i]}" = true && $keep_data_from_previous_run = false ]]
3632	then
3633	rm -r $tmp_data_catalog/${frelin[$i]}
3634	fi
3635	done
3636
3637	else
3638
3639	printf "\n +++ no restart-run possible, since errors occured"
3640	printf "\n during the archive process"
3641	fi
3642
3643	fi
3644
3645
3646
3647	# EVTL. EMAIL-BENACHRICHTIGUNG UEBER ABGESCHLOSSENEN LAUF
3648	if [[ "$email_notification" != "" ]]
3649	then
3650
3651	if [[ $localhost != $fromhost ]]
3652	then
3653	if [[ -f CONTINUE_RUN ]]
3654	then
3655	echo "PALM restart run necessary" > email_text
3656	echo "description header of actual run:" >> email_text
3657	cat CONTINUE_RUN >> email_text
3658	echo "mrun-command to restart:" >> email_text
3659	echo "$mc" >> email_text
3660	else
3661	echo "PALM run with base filename \"$fname\" on host \"$localhost\" finished" > email_text
3662	fi
3663	mail $email_notification < email_text
3664	printf "\n *** email notification sent to \"$email_notification\" "
3665	fi
3666	fi
3667
3668
3669
3670	# ALLE ARBEITEN BEENDET. TEMPORAERER KATALOG KANN GELOESCHT WERDEN
3671	cd $HOME
3672	[[ $delete_temporary_catalog = true ]] && rm -rf $TEMPDIR
3673
3674	else
3675
3676
3677	# FALLS AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL, WERDEN JETZT ENTSPRE-
3678	# CHENDE AKTIONEN DURCHGEFUEHRT
3679
3680	# MRUN-BEFEHL FUER REMOTE-MASCHINE ZUSAMMENSTELLEN
3681	mrun_com="$mrun_script_name -a $afname -c $config_file -d $fname -h $host -H $fromhost -m $memory -t $cpumax -q $queue -R $return_addres -U $return_username -u $remote_username"
3682	[[ "$cpp_opts" != "" ]] && mrun_com=${mrun_com}" -D \"$cpp_opts\""
3683	[[ "$global_revision" != "" ]] && mrun_com=${mrun_com}" -G \"$global_revision\""
3684	[[ $group_number != none ]] && mrun_com=${mrun_com}" -g $group_number"
3685	[[ $do_compile = true ]] && mrun_com=${mrun_com}" -s \"$source_list\""
3686	[[ "$input_list" != "" ]] && mrun_com=${mrun_com}" -i \"$input_list\""
3687	[[ $ignore_archive_error = true ]] && mrun_com=${mrun_com}" -I"
3688	[[ $keep_data_from_previous_run = true ]] && mrun_com=${mrun_com}" -k"
3689	[[ "$additional_conditions" != "" ]] && mrun_com=${mrun_com}" -K \"$additional_conditions\""
3690	# [[ "$makefile" != "$source_path/Makefile" ]] && mrun_com=${mrun_com}" -M \"$makefile\""
3691	[[ "$output_list" != "" ]] && mrun_com=${mrun_com}" -o \"$output_list\""
3692	[[ "$read_from_config" = false ]] && mrun_com=${mrun_com}" -S"
3693	[[ $do_trace = true ]] && mrun_com=${mrun_com}" -x"
3694	[[ "$numprocs" != "" ]] && mrun_com=${mrun_com}" -X $numprocs"
3695	if [[ $use_openmp = true ]]
3696	then
3697	mrun_com=${mrun_com}" -O"
3698	[[ "$tasks_per_node" != "" ]] && mrun_com=${mrun_com}" -T $threads_per_task"
3699	else
3700	[[ "$tasks_per_node" != "" ]] && mrun_com=${mrun_com}" -T $tasks_per_node"
3701	fi
3702	[[ $store_on_archive_system = false ]] && mrun_com=${mrun_com}" -A"
3703	[[ $package_list != "" ]] && mrun_com=${mrun_com}" -p \"$package_list\""
3704	[[ $return_password != "" ]] && mrun_com=${mrun_com}" -P $return_password"
3705	[[ $delete_temporary_catalog = false ]] && mrun_com=${mrun_com}" -B"
3706	[[ $node_usage != default && "$(echo $node_usage \| cut -c1-3)" != "sla" && $node_usage != novice ]] && mrun_com=${mrun_com}" -n $node_usage"
3707	[[ $run_coupled_model = true ]] && mrun_com=${mrun_com}" -Y"
3708	if [[ $do_remote = true ]]
3709	then
3710	printf "\n>>>> MRUN-command on execution host:\n>>>> $mrun_com \n"
3711	fi
3712
3713
3714	# ZUSAMMENSTELLUNG DES JOBSCRIPTS AUF DATEI jobfile
3715	jobfile=jobfile.$RANDOM
3716
3717
3718	# TEMPORAERES VERZEICHNIS GENERIEREN UND NACH DORT WECHSELN
3719	echo "mkdir $TEMPDIR" >> $jobfile
3720	echo "cd $TEMPDIR" >> $jobfile
3721
3722
3723	# EVENTUELL FEHLERVERFOLGUNG AKTIVIEREN
3724	if [[ $do_trace = true ]]
3725	then
3726	echo "set -x" >> $jobfile
3727	else
3728	echo "set +vx" >> $jobfile
3729	fi
3730
3731
3732	# ABSPEICHERN DER QUELLTEXTE (NUR FALLS UEBERSETZT WERDEN SOLL)
3733	# SOWIE GEGEBENENFALLS DES MAKEFILES
3734	if [[ $do_compile = true ]]
3735	then
3736
3737	source_catalog=SOURCES_FOR_RUN_$fname
3738
3739	# UNTERVERZEICHNIS FUER QUELLTEXTE UND MAKEFILE ANLEGEN
3740	# MRUN WIRD DIESES VRZEICHNIS UEBER ENVIRONMENT VARIABLE
3741	# MITGETEILT (UEBERSTEUERT ANGABE IN KONFIGURATIONSDATEI)
3742	echo "mkdir SOURCES_FOR_RUN_$fname" >> $jobfile
3743	echo "export SOURCES_COMPLETE=true" >> $jobfile
3744	echo "cd SOURCES_FOR_RUN_$fname" >> $jobfile
3745
3746	for filename in $source_list
3747	do
3748	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
3749	echo "cat > $filename << \"%END%\"" >> $jobfile
3750	cat $source_catalog/$filename >> $jobfile
3751	echo " " >> $jobfile
3752	echo "%END%" >> $jobfile
3753	echo " " >> $jobfile
3754	done
3755
3756	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
3757	echo "cat > Makefile << \"%END%\"" >> $jobfile
3758	cat $source_catalog/Makefile >> $jobfile
3759	echo " " >> $jobfile
3760	echo "%END%" >> $jobfile
3761	echo " " >> $jobfile
3762
3763	echo "cd - > /dev/null" >> $jobfile
3764
3765	fi
3766
3767
3768	# ABSPEICHERN DER KONFIGURATIONSDATEI
3769	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
3770	echo "cat > $config_file << \"%END%\"" >> $jobfile
3771	cat $config_file >> $jobfile
3772	echo "%END%" >> $jobfile
3773	echo " " >> $jobfile
3774
3775
3776	# ABSPEICHERN DER AKTUELLEN MRUN-VERSION
3777	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
3778	echo "cat > $mrun_script_name <<\"%END%\"" >> $jobfile
3779	cat ${PALM_BIN}/$mrun_script_name >> $jobfile
3780	echo "%END%" >> $jobfile
3781	if [[ $host = lctit ]]
3782	then
3783	echo "sed 's/bin\/ksh/home2\/usr5\/mkanda\/pub\/ksh/' < $mrun_script_name > mrun_new" >> $jobfile
3784	echo "mv mrun_new $mrun_script_name" >> $jobfile
3785	fi
3786	echo "chmod u+x $mrun_script_name" >> $jobfile
3787	echo "execute_mrun=true" >> $jobfile
3788	echo " " >> $jobfile
3789
3790	# EVTL. BENOETIGTE INPUT-DATEIEN PER FTP HOLEN ODER DEM JOB DIREKT
3791	# MITGEBEN UND AUF DEM REMOTE-RECHNER IM BENUTZERVERZEICHNIS ABLEGEN
3792	# FALLS DIESES NICHT EXISTIERT, WIRD VERSUCHT, DAS JEWEILS LETZTE
3793	# UNTERVERZEICHNIS DES PFADNAMENS ANZULEGEN
3794	if [[ $do_remote = true ]]
3795	then
3796	(( i = 0 ))
3797	while (( i < iin ))
3798	do
3799	(( i = i + 1 ))
3800	echo "[[ ! -d ${pathin[$i]} ]] && mkdir -p ${pathin[$i]}" >> $jobfile
3801	if [[ "${transin[$i]}" = job ]]
3802	then
3803	echo "cat > ${remotepathin[$i]} <<\"%END%\"" >> $jobfile
3804	eval cat ${pathin[$i]}/${frelin[$i]} >> $jobfile
3805	echo " " >> $jobfile
3806	echo "%END%" >> $jobfile
3807	else
3808	echo "batch_scp -b -o -g -s -u $return_username $return_addres ${remotepathin[$i]} \"${pathin[$i]}\" ${frelin[$i]}" >> $jobfile
3809	fi
3810
3811	# UEBERPRUEFEN, OB DATEI ANGELEGT WERDEN KONNTE
3812	echo "if [[ \$? = 1 ]]" >> $jobfile
3813	echo "then" >> $jobfile
3814	echo " echo \" \" " >> $jobfile
3815	echo " echo \"+++ file ${remotepathin[$i]} could not be created\" " >> $jobfile
3816	echo " echo \" please check, if directory exists on $host!\" " >> $jobfile
3817	echo " echo \"+++ MRUN will not be continued\" " >> $jobfile
3818	echo " execute_mrun=false" >> $jobfile
3819	echo "fi" >> $jobfile
3820	done
3821	fi
3822
3823	# ARBEITSKATALOG AUF DER LOKALEN MASCHINE FUER EVENTUELLE
3824	# FORTSETZUNGSLAUEFE PER ENV-VARIABLE UEBERGEBEN
3825	echo "LOCAL_PWD=$working_directory" >> $jobfile
3826	echo "export LOCAL_PWD" >> $jobfile
3827
3828	# EBENSO LOKALEN MRUN-KATALOG UEBERGEBEN
3829	echo "LOCAL_MRUN_PATH=$PALM_BIN" >> $jobfile
3830	echo "export LOCAL_MRUN_PATH" >> $jobfile
3831
3832	# WORKAROUND FUER RIAM-NEC-JOBS WEGEN PROFILE-SCHWIERIGKEITEN
3833	if [[ $localhost_realname = "gate" \|\| $localhost = lctit ]]
3834	then
3835	echo "export PALM_BIN=$PALM_BIN" >> $jobfile
3836	fi
3837
3838	# MRUN AUF ZIELRECHNER AUFRUFEN
3839	echo "set -x" >> $jobfile
3840	echo "[[ \$execute_mrun = true ]] && ./$mrun_com" >> $jobfile
3841
3842	echo 'ls -al; echo `pwd`' >> $jobfile
3843	echo "cd \$HOME" >> $jobfile
3844	echo "rm -rf $TEMPDIR" >> $jobfile
3845
3846
3847
3848
3849	# JOB PER SUBJOB STARTEN
3850	if [[ $silent = false ]]
3851	then
3852	printf "\n "
3853	else
3854	printf "\n\n"
3855	fi
3856
3857	subjob $job_on_file -h $host -u $remote_username -g $group_number -q $queue -m $memory -N $node_usage -t $cpumax $XOPT $TOPT $OOPT -n $fname -v -c $job_catalog $jobfile
3858	rm -rf $jobfile
3859
3860
3861	fi # ENDE REMOTE-TEIL
3862
3863
3864
3865	# ENDE DER PROZEDUR

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