Changeset 755

Timestamp:

Aug 29, 2011 9:55:16 AM (13 years ago)

Author:

witha

Message:

adapted for lcflow (ForWind? cluster in Oldenburg)

Location:

palm/trunk

Files:

• INSTALL/MAKE.inc.ifort.forwind (added)
• SCRIPTS/.mrun.config.forwind (added)
• SCRIPTS/mrun (modified) (3 diffs)
• SCRIPTS/palm_simple_run (modified) (2 diffs)
• SOURCE/init_pegrid.f90 (modified) (2 diffs)

palm/trunk/SCRIPTS/mrun

@@ -228 +228 @@
      # 18/08/11 - Marcus - support for Linux OS with German locale
      #                   - properly report hosts on general Linux clusters 
-
+     # 29/08/11 - BjornW - adapted for lcflow (ForWind cluster in Oldenburg)
 
  
@@ -2560 +2560 @@
           [[ ! -f a.out ]]  &&  compile_error=true
           continue   # ANDERENFALLS IST STATUS=1, FALLS A.OUT VORHANDEN
+       elif [[ $localhost = lcflow ]]
+       then 
+          printf "      compiler is called via ssh on \"flow\" \n"
+          ssh  flow02.hpc.uni-oldenburg.de -l $usern ". /cm/local/apps/environment-modules/3.2.6/Modules/3.2.6/init/bash; echo $MODULEPATH; echo $MODULESHOME; MODULEPATH=/cm/shared/modulefiles/; module load netcdf/intel/64/4.1.3 intel/ics/64/2011.0.013 intel/impi/64/4.0.1.007 hdf5/intel/64/1.8.7; cd $TEMPDIR; make $mopts -f Makefile PROG=a.out F90=$compiler_name COPT=\"$cpp_options\" F90FLAGS=\"$fopts\" LDFLAGS=\"$lopts\" "
+          [[ ! -f a.out ]]  &&  compile_error=true
+          continue   # ANDERENFALLS IST STATUS=1, FALLS A.OUT VORHANDEN
        else
           [[ $localhost = lcxt4 ]]  &&  . /opt/modules/default/init/ksh
@@ -3398 +3404 @@
                 then
                     aprun  -n $ii  -N $tasks_per_node  a.out  $ROPTS  < runfile_atmos
+                elif [[ $host = lcflow ]]
+                then
+                   mpiexec  -machinefile $TMPDIR/machines  -n $ii  -env I_MPI_FABRICS shm:ofa a.out  < runfile_atmos  $ROPTS
                 else
                    mpiexec  -machinefile hostfile  -n $ii  a.out  < runfile_atmos  $ROPTS

palm/trunk/SCRIPTS/palm_simple_run

@@ -12 +12 @@
 
      # Last changes:
-     # 25/01/10 - Siggi - Generating the first version
-     # 18/03/10 - Siggi - Some comments changed
+     # 25/01/10 - Siggi  - Generating the first version
+     # 18/03/10 - Siggi  - Some comments changed
+     # 29/08/11 - BjornW - Adapted for lcflow (ForWind cluster in Oldenburg)
 
 
@@ -128 +129 @@
  mpiexec  -machinefile hostfile  -n $mpi_procs  ./palm  < runfile_atmos
 
-# SGI-MPT HLRN
+# SGI-MPT HLRN:
 # mpiexec_mpt  -np $mpi_procs  ./palm  < runfile_atmos
+
+# HPC-FLOW (ForWind):
+# mpiexec  -machinefile $TMPDIR/machines -n $mpi_procs  -env I_MPI_FABRICS shm:ofa ./palm  < runfile_atmos
 
 

palm/trunk/SOURCE/init_pegrid.f90

@@ -5 +5 @@
 ! -----------------
 ! 
+! 2d-decomposition is default for lcflow (ForWind cluster in Oldenburg)
 ! 
 ! ATTENTION: nnz_x undefined problem still has to be solved!!!!!!!!
@@ -140 +141 @@
        IF ( host(1:3) == 'ibm'  .OR.  host(1:3) == 'nec'      .OR. &
             ( host(1:2) == 'lc'  .AND.  host(3:5) /= 'sgi'  .AND.  &
-              host(3:4) /= 'xt'  .AND.  host(3:5) /= 'tit' )  .OR. &
-             host(1:3) == 'dec' )  THEN
+              host(3:4) /= 'xt'  .AND.  host(3:5) /= 'tit'  .AND.  &
+              host(3:6) /= 'flow' )  .OR.  host(1:3) == 'dec' )  THEN
 
           pdims(1) = numprocs