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Mar 13, 2007 2:52:40 AM (17 years ago)
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raasch
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  • palm/trunk/DOC/app/chapter_4.5.2.html

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    6   <title>PALM chapter 4.5.2</title>
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    19 <h4 style="line-height: 100%;"><font size="4">4.5.2 Plots of vertical
     2<html><head>
     3<meta content="text/html; charset=windows-1252" http-equiv="CONTENT-TYPE"><title>PALM chapter 4.5.2</title> <meta content="StarOffice 7 (Win32)" name="GENERATOR"> <meta content="Siegfried Raasch" name="AUTHOR"> <meta content="20041022;12155949" name="CREATED"> <meta content="20041117;11232134" name="CHANGED"> <meta content="parallel LES model" name="KEYWORDS"> <style>
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     8
     9<body style="direction: ltr;" lang="en-US"><h4 style="line-height: 100%;"><font size="4">4.5.2
     10Plots of vertical
    2011profiles with profil</font></h4>
    2112<p style="line-height: 100%;">Output of vertical
    22 profile data is enabled by providing values for the run parameters <a
    23  href="chapter_4.2.html#dt_dopr"><u>dt_dopr</u></a><span
    24  style="text-decoration: none;">
     13profile data is enabled by providing values for the run parameters <a href="chapter_4.2.html#dt_dopr"><u>dt_dopr</u></a><span style="text-decoration: none;">
    2514and </span><a href="chapter_4.2.html#data_output_pr">data_output_pr</a>
    26 <span style="text-decoration: none;">which specify the temporal
     15<span style="text-decoration: none;">which specify the
     16temporal
    2717interval of the output times (in s) and the quantities for which output
    2818is to be made.</span> Output times cannot be defined
    … …  
    3828possible via the
    3929initialization parameter <a href="chapter_4.1.html#statistic_regions">statistic_regions</a>.</p>
    40 <p style="line-height: 100%;">Output of desired profiles (temperature,
    41 velocity, etc.) is steered with the run parameter <a
    42  href="chapter_4.2.html#data_output_pr">data_output_pr</a>.
     30<p style="line-height: 100%;">Output of desired profiles
     31(temperature,
     32velocity, etc.) is steered with the run parameter <a href="chapter_4.2.html#data_output_pr">data_output_pr</a>.
    4333If this parameter is not set by the user, then, independently of the
    4434value of <b>dt_dopr</b>, there will be no output! PALM
    4535creates the local file <a href="chapter_3.4.html#PLOT1D_DATA">PLOT1D_DATA</a>,
    46 which must be linked with a permanent file (see e.g. <a
    47  href="chapter_3.2.html">chapter
     36which must be linked with a permanent file (see e.g. <a href="chapter_3.2.html">chapter
    48373.2</a>) via a file connection statement in the <b>mrun</b>
    4938configuration file. At the end of the run the local file is copied
    5039to this file. Such a statement can look like this: </p>
    51 <ul>
    52   <pre style="margin-bottom: 0.5cm; line-height: 100%;"><font size="2"
    53  style="font-size: 10pt;">PLOT1D_DATA   out:loc:tr   pr   ~/PLOT/$fname   _pr_in.</font></pre>
    54 </ul>
    55 <p style="line-height: 100%;">If the respective <b>mrun</b> call is
     40<ul> <pre style="margin-bottom: 0.5cm; line-height: 100%;"><font style="font-size: 10pt;" size="2">PLOT1D_DATA out:loc:tr pr ~/PLOT/$fname _pr_in.</font></pre></ul>
     41<p style="line-height: 100%;">If the respective <b>mrun</b>
     42call is
    5643like<br>
    57 </p>
    58 <ul>
    59   <pre style="margin-bottom: 0.5cm; line-height: 100%;"><font size="2"
    60  style="font-size: 10pt;">mrun -d test -r “pr”
    61 </font></pre>
    62 </ul>
    63 <p style="line-height: 100%;">then the local f<span
    64  style="text-decoration: none;">ile
    65 </span><tt><span style="text-decoration: none;"><font size="2"
    66  style="font-size: 10pt;">PLOT1D_DATA</font></span></tt><span
    67  style="text-decoration: none;"><font size="2" style="font-size: 10pt;">
    68 </font>is copied to the permanent file </span><tt><span
    69  style="text-decoration: none;"><font size="2" style="font-size: 10pt;">~/PLOT/test/test_pr_in</font></span></tt><span
    70  style="text-decoration: none;">.
    71 However, the character string <font size="2" style="font-size: 10pt;">“</font></span><tt><span
    72  style="text-decoration: none;"><font size="2" style="font-size: 10pt;">pr</font></span></tt><span
    73  style="text-decoration: none;"><font size="2" style="font-size: 10pt;">”</font>
    74 activating the file connection statement </span><span
    75  style="text-decoration: none;">(see third column of the statement) </span><span
    76  style="text-decoration: none;">must be given in the <b>mrun</b>
     44</p><ul> <pre style="margin-bottom: 0.5cm; line-height: 100%;"><font style="font-size: 10pt;" size="2">mrun -d test -r &ldquo;pr&rdquo; &hellip;</font></pre>
     45</ul><p style="line-height: 100%;">then the local f<span style="text-decoration: none;">ile
     46</span><tt><span style="text-decoration: none;"><font style="font-size: 10pt;" size="2">PLOT1D_DATA</font></span></tt><span style="text-decoration: none;"><font style="font-size: 10pt;" size="2">
     47</font>is copied to the permanent file </span><tt><span style="text-decoration: none;"><font style="font-size: 10pt;" size="2">~/PLOT/test/test_pr_in</font></span></tt><span style="text-decoration: none;">.
     48However, the character string <font style="font-size: 10pt;" size="2">&ldquo;</font></span><tt><span style="text-decoration: none;"><font style="font-size: 10pt;" size="2">pr</font></span></tt><span style="text-decoration: none;"><font style="font-size: 10pt;" size="2">&rdquo;</font>
     49activating the file connection statement </span><span style="text-decoration: none;">(see third column of the
     50statement) </span><span style="text-decoration: none;">must
     51be given in the <b>mrun</b>
    7752call as argument of the
    7853option -r (and/or -o)<b>.</b> If t</span>his is
    … …  
    8358<p style="line-height: 100%;">The created data file can be
    8459directly used as input file for the plot software <b>profil</b>.
    85 <b>profil</b> needs another file, the so-called parameter file, which
     60<b>profil</b> needs another file, the so-called parameter
     61file, which
    8662specifies the plot layout. This file is created by PALM under the local
    8763name <a href="chapter_3.4.html#PLOT1D_PAR">PLOT1D_PAR</a>
    8864and also needs a file connection statement, e.g.: </p>
    89 <ul>
    90   <pre style="margin-bottom: 0.5cm; line-height: 100%;"><font size="2"
    91  style="font-size: 10pt;">PLOT1D_PAR out:loc:tr    pr ~/PLOT/$fname   _pr_par.</font></pre>
    92 </ul>
     65<ul> <pre style="margin-bottom: 0.5cm; line-height: 100%;"><font style="font-size: 10pt;" size="2">PLOT1D_PAR out:loc:tr pr ~/PLOT/$fname _pr_par.</font></pre></ul>
    9366<p style="line-height: 100%;">If you are in the directory
    94 <tt><font size="2" style="font-size: 10pt;">~/PLOT/test</font>,</tt>the
     67<tt><font style="font-size: 10pt;" size="2">~/PLOT/test</font>,</tt>the
    9568data can be plotted by entering </p>
    96 <ul>
    97   <pre style="margin-bottom: 0.5cm; line-height: 100%;"><font size="2"
    98  style="font-size: 10pt;">profil -d test_pr_in -p test_pr_par</font></pre>
    99 </ul>
     69<ul> <pre style="margin-bottom: 0.5cm; line-height: 100%;"><font style="font-size: 10pt;" size="2">profil -d test_pr_in -p test_pr_par</font></pre></ul>
    10070<p style="line-height: 100%;">The default plot layout as
    10171specified in the parameter file is as follows: the profiles of the
    … …  
    11080It is very important to note that only profiles are plottet, which are
    11181assigned to
    112 a coordinate system via <b>cross_profiles</b>. If a certain
    113 variable is selected by <b>data_output_pr</b> but not assigned to a coordinate
    114 system via <b>cross_profiles</b>, then the appropriate profile data
     82a coordinate system via <b>cross_profiles</b>. If a
     83certain
     84variable is selected by <b>data_output_pr</b> but not
     85assigned to a coordinate
     86system via <b>cross_profiles</b>, then the appropriate
     87profile data
    11588are written to the file PLOT1D_DATA but they are not plotted! All
    11689panels for which data
    … …  
    11992to be plottet in a panel but output of potential temperature is not set
    12093via
    121 <b>data_output_pr</b>, then the respective panel is not drawn
     94<b>data_output_pr</b>, then the respective panel is not
     95drawn
    12296(thus no 'empty' panels appear in the plot). The
    12397parameters <a href="chapter_4.2.html#profile_columns">profile_columns</a>
    … …  
    127101starting in the top row from left to right.
    128102If the number of panels to be plotted is larger than the
    129 product <b>profile_columns</b> * <b>profile_rows</b>, then the plot
     103product <b>profile_columns</b> * <b>profile_rows</b>,
     104then the plot
    130105is continued on a second page. </p>
    131 <p style="line-height: 100%;">During a model run output of profiles to
     106<p style="line-height: 100%;">During a model run output of
     107profiles to
    132108file PLOT1D_DATA is usually carried out for several times (as
    133 determined by <span style="font-weight: bold;">dt_dopr</span>)<font
    134  size="2" style="font-size: 10pt;">.</font>
     109determined by <span style="font-weight: bold;">dt_dopr</span>)<font style="font-size: 10pt;" size="2">.</font>
    135110All of these profiles belonging to the same quantity are plotted in the
    136111same panel. The different output times are marked by different line
    … …  
    141116This legend string is taken from file PLOT1D_DATA
    142117in which a comment line is placed ahead of each profile data. </p>
    143 <p style="line-height: 100%;">For identification, each plot is
     118<p style="line-height: 100%;">For identification, each
     119plot is
    144120provided with a title, which contains the model version number, the
    145121run identifier (base file name + number of the restart run), the name
    146122of the host where the run was executed, the date and time of the
    147123beginning
    148 of the run as well as the averaging domain (by default: <span
    149  style="font-style: italic;">'total
    150 domain'</span>). If the profiles are additionally temporally averaged,
    151 each panel gets an appropriate sub-label (<span
    152  style="font-style: italic;">'time
    153 averaged over
    154  s'</span>). The axes labels of the x axes of the
     124of the run as well as the averaging domain (by default: <span style="font-style: italic;">'total
     125domain'</span>). If the profiles are additionally temporally
     126averaged,
     127each panel gets an appropriate sub-label (<span style="font-style: italic;">'time
     128averaged over&hellip; s'</span>). The axes labels of the x
     129axes of the
    155130individual panels are specified with the run parameter
    156131<a href="chapter_4.2.html#cross_xtext">cross_xtext</a>,
    … …  
    162137and <a href="chapter_4.2.html#cross_normalized_y">cross_normalized_y</a>).
    163138The respective normalization is noted in the axes label. </p>
    164 <p style="line-height: 100%;"><font color="#000000">As already
     139<p style="line-height: 100%;"><font color="#000000">As
     140already
    165141mentioned, the profiles of a quantity
    166142for all output times are plotted into the same panel. This is not
    … …  
    174150restart runs. For this
    175151purpose the configuration file must be changed such that for restart
    176 runs the profile data are appended to already existing<font
    177  color="#000000">
     152runs the profile data are appended to already existing<font color="#000000">
    178153data</font> (thus all data are output into one file). Then the
    179 configuration file has two entries for </font><tt><font color="#000000">PLOT1D_DATA</font></tt><font
    180  color="#000000">:
    181 </font></p>
    182 <ul>
    183   <pre style="line-height: 100%;"><font size="2"
    184  style="font-size: 10pt;">PLOT1D_DATA out:loc:tr  pr# ~/PLOT/$fname _pr_in</font><br><font
    185  size="2" style="font-size: 10pt;">PLOT1D_DATA out:loc:tra prf ~/PLOT/$fname _pr_in.</font></pre>
    186 </ul>
    187 <p style="line-height: 100%;">The first run of the job chain is now </p>
    188 <ul>
    189   <pre style="margin-bottom: 0.5cm; line-height: 100%;"><font size="2"
    190  style="font-size: 10pt;">mrun - D test - r “pr#
    191 </font></pre>
    192 </ul>
    193 <p style="line-height: 100%;">For the restart runs, the "#" in the <span
    194  style="font-weight: bold;">mrun</span>
     154configuration file has two entries for </font><tt><font color="#000000">PLOT1D_DATA</font></tt><font color="#000000">:
     155</font></p><ul> <pre style="line-height: 100%;"><font style="font-size: 10pt;" size="2">PLOT1D_DATA out:loc:tr pr# ~/PLOT/$fname _pr_in</font><br><font style="font-size: 10pt;" size="2">PLOT1D_DATA out:loc:tra prf ~/PLOT/$fname _pr_in.</font></pre>
     156</ul><p style="line-height: 100%;">The first run of
     157the job chain is now </p>
     158<ul> <pre style="margin-bottom: 0.5cm; line-height: 100%;"><font style="font-size: 10pt;" size="2">mrun - D test - r &ldquo;pr#&hellip;</font></pre></ul>
     159<p style="line-height: 100%;">For the restart runs, the
     160"#" in the <span style="font-weight: bold;">mrun</span>
    195161call is automatically replaced by an "f". At the end of the job chain
    196162there will only be one data file containing the complete profile data.
    197163The file connection statement for the parameter file
    198 <font size="3">PLOT1D_PAR</font> has not changed, thus a new cycle of
     164<font size="3">PLOT1D_PAR</font> has not changed,
     165thus a new cycle of
    199166the respective permanent file is created for each run. To plot
    200167the combined data with the parameter file created by the last run of
    201168the job chain, the run parameter
    202169<a href="chapter_4.2.html#use_prior_plot1d_parameters">use_prior_plot1d_parameters</a>
    203 = <i>.TRUE.</i> must be additionally set for the restart runs. If this
     170= <i>.TRUE.</i> must be additionally set for the restart
     171runs. If this
    204172is
    205173forgotten, the parameter file is useless and the data cannot
    206174be plotted. </p>
    207 <p style="line-height: 100%;">The default layout of the plots of
     175<p style="line-height: 100%;">The default layout of the
     176plots of
    208177vertical profiles can be changed by editing the
    209 parameter file. For a detailed description of the <span
    210  style="font-weight: bold;">profil</span> parameters see the
    211 <a
    212  href="http://www.muk.uni-hannover.de/institut/software/profil_beschreibung.html">profil</a>
     178parameter file. For a detailed description of the <span style="font-weight: bold;">profil</span> parameters
     179see the
     180<a href="http://www.muk.uni-hannover.de/institut/software/profil_beschreibung.html">profil</a>
    213181manual (only in German). <br>
    214 </p>
    215 <hr>
    216 <p style="line-height: 100%;"><br>
    217 <font color="#000080"><font color="#000080"><a href="chapter_4.5.html"><font
    218  color="#000080"><img width="32" height="32" border="2" align="bottom"
    219  name="Grafik1" src="left.gif"></font></a><a href="index.html"><font
    220  color="#000080"><img width="32" height="32" border="2" align="bottom"
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     182</p><hr>
     183<p style="line-height: 100%;"><br><font color="#000080"><font color="#000080"><a href="chapter_4.5.html"><font color="#000080"><img name="Grafik1" src="left.gif" align="bottom" border="2" height="32" width="32"></font></a><a href="index.html"><font color="#000080"><img name="Grafik2" src="up.gif" align="bottom" border="2" height="32" width="32"></font></a><a href="chapter_4.5.3.html"><font color="#000080"><img name="Grafik3" src="right.gif" align="bottom" border="2" height="32" width="32"></font></a></font></font></p>
    224184<p style="line-height: 100%;"><span style="font-style: italic;">Last
    225 change:</span> 19/04/05 (SR)&nbsp;</p>
    226 </body>
    227 </html>
     185change:</span> $Id$&nbsp;</p>
     186</body></html>
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