Ignore:
Timestamp:
Dec 9, 2020 1:08:08 PM (11 months ago)
Author:
gronemeier
Message:

add additional output paths to palm.iofiles and update configuration files accordingly

File:
1 edited

Legend:

Unmodified
Added
Removed
  • palm/trunk/SCRIPTS/.palm.config.default.in

    r4484 r4814  
    1515%user_source_path    @CMAKE_INSTALL_PREFIX@/JOBS/$run_identifier/USER_CODE
    1616%fast_io_catalog     @CMAKE_INSTALL_PREFIX@/tmp
    17 %local_jobcatalog    @CMAKE_INSTALL_PREFIX@/job_logfiles
     17%restart_data_path   @CMAKE_INSTALL_PREFIX@/tmp
     18%output_data_path    @CMAKE_INSTALL_PREFIX@/JOBS
     19%local_jobcatalog    @CMAKE_INSTALL_PREFIX@/JOBS/$run_identifier/LOG_FILES
    1820#%remote_jobcatalog   <path/to/directory>
    1921#
     
    2931#
    3032#%defaultqueue        <queue>
     33#%project_account     <project-account>
    3134#%submit_command      /opt/moab/default/bin/msub -E
    3235#
     
    4851#-------------------------------------------------------------------------------
    4952BD:#!/bin/bash
     53#BD:#PBS -A {{project_account}}
    5054BD:#PBS -N {{run_id}}
    5155BD:#PBS -l walltime={{cpu_hours}}:{{cpu_minutes}}:{{cpu_seconds}}
     
    6165#-------------------------------------------------------------------------------
    6266BDT:#!/bin/bash
     67#BDT:#PBS -A {{project_account}}
    6368BDT:#PBS -N job_protocol_transfer
    6469BDT:#PBS -l walltime=00:30:00
     
    6974#
    7075#-------------------------------------------------------------------------------
    71 # INPUT-commands. These commands are executed before running PALM 
    72 # Lines must start with "IC:" 
     76# INPUT-commands. These commands are executed before running PALM
     77# Lines must start with "IC:"
    7378#-------------------------------------------------------------------------------
    7479IC:ulimit  -s unlimited
     
    7681#-------------------------------------------------------------------------------
    7782# ERROR-commands. These commands are executed when PALM terminates abnormally
    78 # Lines must start with "EC:" 
     83# Lines must start with "EC:"
    7984#-------------------------------------------------------------------------------
    8085EC:[[ $locat = execution ]]  &&  cat  RUN_CONTROL
     
    8287#-------------------------------------------------------------------------------
    8388# OUTPUT-commands. These commands are executed when PALM terminates normally
    84 # Lines must start with "OC:" 
     89# Lines must start with "OC:"
    8590#-------------------------------------------------------------------------------
    8691#
     
    9196# Combine all particle information files
    9297OC:[[ -f PARTICLE_INFOS/_0000 ]]  &&  cat  PARTICLE_INFOS/* >> PARTICLE_INFO
    93 
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