Changeset 4211 for palm/trunk/TESTS/cases/oceanml
- Timestamp:
- Sep 2, 2019 2:09:37 PM (5 years ago)
- Location:
- palm/trunk/TESTS/cases/oceanml
- Files:
-
- 1 deleted
- 2 edited
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INPUT/oceanml_p3d (modified) (4 diffs)
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MONITORING/oceanml_rc (modified) (9 diffs)
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OUTPUT/oceanml_ts.nc (deleted)
Legend:
- Unmodified
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palm/trunk/TESTS/cases/oceanml/INPUT/oceanml_p3d
r4002 r4211 2 2 !-- INITIALIZATION PARAMETER NAMELIST 3 3 ! Documentation: https://palm.muk.uni-hannover.de/trac/wiki/doc/app/inipar 4 !------------------------------------------------------------------------------- 5 ! This is a setup for generating an ocean mixed layer including the effects 6 ! of Stokes drift (Langmuir circulation) and wave breaking, based on the 7 ! case described in Noh, Y., H.S. Min and S. Raasch (2004): Large-eddy 8 ! simulation of the ocean mixed layer: The effects of wave breaking and 9 ! Langmuir circulation. J. Phys. Oceanogr., 34, 720-735. 4 10 !------------------------------------------------------------------------------- 5 11 &initialization_parameters … … 7 13 !-- grid parameters 8 14 !------------------------------------------------------------------------------- 9 nx = 63, ! Number of gridboxes in x-direction (nx+1) 10 ny = 63, ! Number of gridboxes in y-direction (ny+1) 11 nz = 64, ! Number of gridboxes in z-direction (nz) 15 nx = 63, ! Number of gridboxes in x-direction (nx+1) 16 ! For Noh et al. change to nx = 239 17 ny = 63, ! Number of gridboxes in y-direction (ny+1) 18 ! For Noh et al. change to nx = 239 19 nz = 64, ! Number of gridboxes in z-direction (nz) 12 20 13 dx 14 dy 15 dz 21 dx = 1.25, ! Size of single gridbox in x-direction 22 dy = 1.25, ! Size of single gridbox in y-direction 23 dz = 1.25, ! Size of single gridbox in z-direction 16 24 ! 17 25 !-- initialization 18 26 !------------------------------------------------------------------------------- 19 initializing_actions 27 initializing_actions = 'set_constant_profiles', ! initial conditions 20 28 21 latitude = 55.6, 29 latitude = 55.0, ! corresponds to a Coriolis parameter 30 ! f = 1.2**-4 s-1 22 31 23 ug_surface = 0.0, ! u-comp of geostrophic windat surface24 vg_surface = 0.0, ! v-comp of geostrophic windat surface32 ug_surface = 0.0, ! u-comp of geostrophic flow at surface 33 vg_surface = 0.0, ! v-comp of geostrophic flow at surface 25 34 26 pt_surface 35 pt_surface = 300.0, ! initial surface potential temp 27 36 ! 28 37 !-- boundary conditions 29 38 !------------------------------------------------------------------------------- 30 bc_uv_b = 'neumann', 31 bc_uv_t = 'neumann', 32 bc_pt_b = 'neumann', 33 bc_pt_t = 'neumann', 34 bc_p_b = 'neumann', 35 bc_p_t = 'neumann', 36 bc_s_b = 'initial_gradient', 37 bc_s_t = 'neumann', 39 bc_uv_b = 'neumann', 40 bc_uv_t = 'neumann', 41 bc_pt_b = 'neumann', 42 bc_pt_t = 'neumann', 43 bc_p_b = 'neumann', 44 bc_p_t = 'neumann', 38 45 39 use_top_fluxes 40 use_surface_fluxes 41 constant_flux_layer 46 use_top_fluxes = .T., 47 use_surface_fluxes = .F., 48 constant_flux_layer = .F., 42 49 43 top_momentumflux_u = -0.0001,44 top_momentumflux_v 50 top_momentumflux_u = -0.0001, ! corresponds to u* = 0.01 m/s 51 top_momentumflux_v = 0.0, 45 52 46 top_heatflux = 0.0, 53 top_heatflux = 1.02e-4, ! gives weak cooling at ocean 54 ! surface to initiate buoyancy driven 55 ! turbulence, 56 ! see surface_cooling_spinup_time 57 ! below 47 58 ! 48 59 !-- numerics 49 60 !------------------------------------------------------------------------------- 50 fft_method 61 fft_method = 'temperton-algorithm', ! build-in fft method 51 62 52 momentum_advec = 'pw-scheme', ! use Piacsek and Williams scheme 53 scalar_advec = 'pw-scheme', ! use Piacsek and Williams scheme 63 momentum_advec = 'ws-scheme', ! attention: Noh et al. used the 64 ! Piascek-Williams advection scheme 65 scalar_advec = 'ws-scheme', ! attention: Noh et al. used the 66 ! Piascek-Williams advection scheme 54 67 55 68 / ! end of initialization parameter namelist … … 63 76 !-- run steering 64 77 !------------------------------------------------------------------------------- 65 end_time = 300.0, ! simulation time of the 3D model 78 end_time = 120.0, ! simulation time of the 3D model 79 ! For Noh et al. change to 28800.0 s 66 80 67 create_disturbances 68 dt_disturb = 60.0, ! interval for random perturbations69 disturbance_ energy_limit = 1.0e-4, ! upper limit for perturbation energy70 disturbance_amplitude = 0.25e-1, ! maximum perturbation amplitude 81 create_disturbances = .TRUE., ! randomly perturbate horiz. velocity 82 ! at beginning of the run 83 disturbance_amplitude = 0.25e-3, ! maximum perturbation amplitude 84 71 85 ! 72 86 !-- data output 73 87 !------------------------------------------------------------------------------- 74 dt_run_control = 0.0, ! output interval for run control88 netcdf_data_format = 2, ! output in NetCDF3 64bit offset format 75 89 76 data_output_pr = 'e', 77 'e*', 78 '#theta', 90 dt_run_control = 0.0, ! output interval for run control 91 92 ! remove the following line to create output of time series 93 dt_dots = 100000.0, 94 95 dt_dopr = 120.0, ! For Noh et al. change to 1800.0 96 97 averaging_interval_pr = 120.0, ! For Noh et al. change to 600.0 98 dt_averaging_input_pr = 10.0 99 data_output_pr = 'e', 'e*', '#theta', 100 'prho', 'u', 'v', 'w', 'km', 'kh', 'l', 101 'u*2', 'v*2', 'w*2', 'theta*2', 'w*3', 102 'wu', 'w*u*', 'w"u"', 103 'wv', 'w*v*', 'w"v"', 104 'w*e*', 'w*p*', 105 'w*u*u*:dz', 'w*p*:dz', 'w"e:dz', 106 107 ! uncomment following lines to create some of the output that is shown in 108 ! the Noh et al. paper 109 ! dt_data_output = 3600.0, 110 ! data_output = 'w', 'theta', 79 111 80 112 / ! end of runtime parameter namelist 113 81 114 82 115 !------------------------------------------------------------------------------- … … 85 118 !------------------------------------------------------------------------------- 86 119 &ocean_parameters 87 ! 88 !-- top boundary condition for salinity 120 121 stokes_waveheight = 1.0 ! results in a turbulent Langmuir 122 ! number La = 0.45 123 stokes_wavelength = 40.0, ! results in a turbulent Langmuir 124 ! number La = 0.45 125 wave_breaking = .F., ! The implemented parameterization is 126 ! designed for a vertical grid spacing 127 ! of dz = 1.25m and time steps of 128 ! about 4 s. It will probably fail for 129 ! other setups. 130 ! Attention: 131 ! For Noh et al. switch to .T. 132 surface_cooling_spinup_time = 900.0, ! add a surface cooling only at start 133 ! in order to initiate turbulence 134 135 salinity = .TRUE., ! salinity switched on just for 136 ! testing the salinity code 137 ! remove this and the following two 138 ! parameters for simulating the 139 ! Noh et al. case 89 140 bc_sa_t = 'neumann', 90 91 ! zero salinityflux at ocean surface 92 top_salinityflux = 0.0, 141 top_salinityflux = 0.0, ! zero salinityflux at ocean surface 93 142 94 143 / ! end of ocean parameters 144 95 145 ! WARNING: do not remove this blank line from the end of this file -
palm/trunk/TESTS/cases/oceanml/MONITORING/oceanml_rc
r4002 r4211 1 1 2 2 ****************************** -------------------------------------------- 3 * PALM 6.0 Rev: 3527M* ocean - run without 1D - prerun3 * PALM 6.0 Rev: 4071 * ocean - run without 1D - prerun 4 4 ****************************** -------------------------------------------- 5 5 6 Date: 201 8-11-15 Run: test_oceanml__intel_default__47 Time: 21:36:07Run-No.: 008 Run on host: intel_defa6 Date: 2019-09-02 Run: oceanml 7 Time: 15:36:39 Run-No.: 00 8 Run on host: default 9 9 Number of PEs: 4 Processor grid (x,y): ( 2, 2) calculated 10 10 ------------------------------------------------------------------------------ … … 17 17 --> Solve perturbation pressure via FFT using temperton-algorithm routines 18 18 perturbation pressure is calculated at every Runge-Kutta step 19 --> Momentum advection via Piascek-Williams-Scheme (Form C3) or Upstream20 --> Scalar advection via Piascek-Williams-Scheme (Form C3) or Upstream19 --> Momentum advection via Wicker-Skamarock-Scheme 5th order 20 --> Scalar advection via Wicker-Skamarock-Scheme 5th order 21 21 --> Loop optimization method: cache 22 22 --> Time differencing scheme: runge-kutta-3 … … 29 29 Timestep: variable maximum value: 20.000 s CFL-factor: 0.90 30 30 Start time: 0.000 s 31 End time: 300.000 s31 End time: 120.000 s 32 32 33 33 … … 67 67 68 68 69 Ocean settings:70 ------------------------------------------71 72 73 74 69 Boundary conditions: 75 70 ------------------- … … 93 88 Predefined constant momentumflux: u: -0.000100 m**2/s**2 94 89 v: 0.000000 m**2/s**2 95 Predefined constant heatflux: 0.000 000K m/s90 Predefined constant heatflux: 0.000102 K m/s 96 91 Predefined constant salinityflux: 0.000000 psu m/s 97 92 … … 131 126 132 127 133 1D-Profiles:134 Output format: netCDF 64bit offset135 136 137 Profile: e, e*, theta,138 Output every ******** s139 Time averaged over 0.00 s140 Averaging input every 0.00 s141 142 128 Time series: 143 129 Output format: netCDF 64bit offset 144 130 145 Output every 0.00s131 Output every ******** s 146 132 147 133 ------------------------------------------------------------------------------ … … 151 137 ------------------- 152 138 153 Geograph. latitude : latitude = 55. 6degr139 Geograph. latitude : latitude = 55.0 degr 154 140 Geograph. longitude : longitude = 0.0 degr 155 141 Angular velocity : omega = 0.729E-04 rad/s 156 Coriolis parameter : f = 0.0001 201/s157 f* = 0.00008 21/s142 Coriolis parameter : f = 0.000119 1/s 143 f* = 0.000084 1/s 158 144 159 145 Day of the year at model start : day_init = 172 … … 179 165 ----------------------------- 180 166 181 Disturbance impulse (u,v) every : 60.00s182 Disturbance amplitude : 0.0 3m/s167 Disturbance impulse (u,v) every : ****** s 168 Disturbance amplitude : 0.00 m/s 183 169 Lower disturbance level : -28.12 m (GP 42) 184 170 Upper disturbance level : -4.38 m (GP 61) 185 Disturbances cease as soon as the disturbance energy exceeds 0.0 00 m**2/s**2171 Disturbances cease as soon as the disturbance energy exceeds 0.010 m**2/s**2 186 172 Random number generator used : random-parallel 187 173 188 174 189 175 190 *** no user-defined variables found 191 176 *** dynamic module disabled 177 178 179 180 Ocean settings: 181 ------------------------------------------ 182 183 --> Craik-Leibovich vortex force and Stokes drift switched on 184 waveheight: 1.0 m wavelength: 40.0 m 185 --> surface heat flux is switched off after 900.0 s 192 186 ------------------------------------------------------------------------------ 193 187 … … 199 193 RUN ITER. HH:MM:SS.SS DT(E) UMAX VMAX WMAX U* W* THETA* Z_I ENERG. DISTENERG DIVOLD DIVNEW UMAX(KJI) VMAX(KJI) WMAX(KJI) ADVECX ADVECY MGCYC 200 194 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 201 0 0 00:00:00.00 20.0000A 0.0228D 0.0228D 0.0124 0.000 0.00 0.000E+00 0. 0.122E-04 0.122E-04 0.270E-02 0.387E-12 53 1 6 58 26 28 47 9 8 0.000 0.000 0 202 0 1 00:00:20.00 20.0000A 0.0233 -0.0219 -0.0126 0.000 0.00 0.000E+00 0. 0.123E-04 0.122E-04 0.442E-04 0.609E-14 53 1 6 60 21 57 47 45 36 0.000 0.000 0 203 0 2 00:00:40.00 20.0000A 0.0234 -0.0224 -0.0131 0.000 0.00 0.000E+00 0. 0.123E-04 0.122E-04 0.441E-04 0.607E-14 53 1 6 57 54 38 47 45 36 0.000 0.000 0 204 0 3 00:01:00.00 20.0000A -0.0340D 0.0331D -0.0184 0.000 0.00 0.000E+00 0. 0.248E-04 0.244E-04 0.271E-02 0.388E-12 60 53 41 58 27 28 50 31 19 0.000 0.000 0 205 0 4 00:01:20.00 20.0000A -0.0329 0.0325 -0.0188 0.000 0.00 0.000E+00 0. 0.249E-04 0.242E-04 0.885E-04 0.122E-13 60 53 41 58 27 28 50 31 19 0.000 0.000 0 206 0 5 00:01:40.00 20.0000A 0.0315 -0.0323 -0.0188 0.000 0.00 0.000E+00 0. 0.250E-04 0.240E-04 0.879E-04 0.121E-13 49 55 35 57 1 26 50 31 19 0.000 0.000 0 207 0 6 00:02:00.00 20.0000A 0.0435D -0.0470D -0.0219 0.000 0.00 0.000E+00 0. 0.375E-04 0.360E-04 0.272E-02 0.390E-12 56 24 27 57 0 26 54 50 12 0.000 0.000 0 208 0 7 00:02:20.00 20.0000A 0.0445 -0.0456 -0.0217 0.000 0.00 0.000E+00 0. 0.374E-04 0.354E-04 0.129E-03 0.177E-13 56 24 28 57 0 26 47 26 27 0.000 0.000 0 209 0 8 00:02:40.00 20.0000A 0.0473 0.0449 -0.0218 0.000 0.00 0.000E+00 0. 0.372E-04 0.346E-04 0.127E-03 0.174E-13 56 24 28 53 53 45 47 26 27 0.000 0.000 0 210 0 9 00:03:00.00 20.0000A 0.0528D -0.0504D -0.0250 0.000 0.00 0.000E+00 0. 0.495E-04 0.463E-04 0.271E-02 0.388E-12 56 24 28 43 11 40 56 43 19 0.000 0.000 0 211 0 10 00:03:20.00 20.0000A 0.0542 0.0496 -0.0253 0.000 0.00 0.000E+00 0. 0.489E-04 0.449E-04 0.165E-03 0.223E-13 60 48 2 57 8 30 56 43 19 0.000 0.000 0 212 0 11 00:03:40.00 20.0000A 0.0528 -0.0523 -0.0253 0.000 0.00 0.000E+00 0. 0.481E-04 0.433E-04 0.160E-03 0.215E-13 60 48 3 43 10 40 55 51 57 0.000 0.000 0 213 0 12 00:04:00.00 19.6000A 0.0504D -0.0575D -0.0298 0.000 0.00 0.000E+00 0. 0.595E-04 0.539E-04 0.273E-02 0.393E-12 43 42 39 57 27 20 58 20 59 0.000 0.000 0 214 0 13 00:04:19.60 19.9000A 0.0544 -0.0566 -0.0284 0.000 0.00 0.000E+00 0. 0.581E-04 0.515E-04 0.186E-03 0.249E-13 43 42 39 57 26 20 58 20 59 0.000 0.000 0 215 0 14 00:04:39.50 19.7000A 0.0520 -0.0572 -0.0274 0.000 0.00 0.000E+00 0. 0.565E-04 0.489E-04 0.181E-03 0.241E-13 43 42 39 57 26 20 57 20 59 0.000 0.000 0 216 0 15 00:04:59.19 20.0000A -0.0511 -0.0511 -0.0284 0.000 0.00 0.000E+00 0. 0.549E-04 0.462E-04 0.171E-03 0.226E-13 53 33 8 59 60 21 54 50 57 0.000 0.000 0 217 0 16 00:05:19.19 19.9000A 0.0559D -0.0566D -0.0341 0.000 0.00 0.000E+00 0. 0.655E-04 0.556E-04 0.272E-02 0.391E-12 58 23 33 48 9 0 54 50 57 0.000 0.000 0 195 0 0 00:00:00.00 20.0000A 0.0002D 0.0002D 0.0001 0.000 0.00 0.000E+00 0. 0.122E-08 0.122E-08 0.270E-04 0.387E-14 53 1 6 58 26 28 47 9 8 0.000 0.000 0 196 0 1 00:00:20.00 20.0000A 0.0016 -0.0002 0.0001 0.000 0.00 0.000E+00 0. 0.401E-07 0.122E-08 0.380E-06 0.423E-16 65 55 48 60 21 57 47 9 8 0.000 0.000 0 197 0 2 00:00:40.00 20.0000A 0.0032 -0.0002 0.0001 0.000 0.00 0.000E+00 0. 0.156E-06 0.122E-08 0.380E-06 0.422E-16 65 56 48 61 22 63 47 9 8 0.000 0.000 0 198 0 3 00:01:00.00 20.0000A 0.0048 -0.0003 0.0001 0.000 0.00 0.000E+00 0. 0.347E-06 0.122E-08 0.380E-06 0.421E-16 65 56 48 64 54 31 47 9 8 0.000 0.000 0 199 0 4 00:01:20.00 20.0000A 0.0063 -0.0004 0.0001 0.000 0.00 0.000E+00 0. 0.611E-06 0.122E-08 0.380E-06 0.419E-16 65 55 49 64 54 31 47 9 8 0.000 0.000 0 200 0 5 00:01:40.00 20.0000A 0.0079 -0.0005 0.0001 0.000 0.00 0.000E+00 0. 0.945E-06 0.122E-08 0.381E-06 0.417E-16 64 55 50 65 54 31 58 16 15 0.000 0.000 0 201 0 6 00:02:00.00 20.0000A 0.0094 -0.0007 0.0001 0.000 0.00 0.000E+00 0. 0.135E-05 0.122E-08 0.381E-06 0.415E-16 65 55 50 64 63 26 58 16 15 0.000 0.000 0
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