Ignore:
Timestamp:
Oct 30, 2018 2:12:31 PM (3 years ago)
Author:
raasch
Message:

options -h and -d renamed -c and -r, respectively, job_queue renamed job_logfiles in sveral configuration files

File:
1 edited

Legend:

Unmodified
Added
Removed
  • palm/trunk/SCRIPTS/palmrun

    r3402 r3455  
    2727# -----------------
    2828# $Id$
     29# options -h and -d renamed -c and -r, respectively
     30#
     31# 3402 2018-10-23 11:49:24Z knoop
    2932# job_id is set for compatibility reasons with older versions of config files
    3033#
     
    288291    # READ SHELLSCRIPT-OPTIONS AND REBUILD THE PALMRUN-COMMAND STRING (prc),
    289292    # WHICH WILL BE USED TO START RESTART-JOBS
    290  while  getopts  :a:A:bBCd:FG:h:i:jkm:M:O:q:R:s:t:T:u:U:vVw:W:xX:yY:zZ option
     293 while  getopts  :a:A:bBc:CFG:i:jkm:M:O:q:r:R:s:t:T:u:U:vVw:W:xX:yY:zZ option
    291294 do
    292295   case  $option  in
     
    295298       (b)   create_batch_job=true; prc="$prc -b";;
    296299       (B)   delete_temporary_catalog=false; prc="$prc -B";;
     300       (c)   configuration_identifier=$OPTARG; prc="$prc -c$OPTARG";;
    297301       (C)   restart_run=true; prc="$prc -C";;
    298        (d)   run_identifier=$OPTARG; prc="$prc -d$OPTARG";;
    299302       (F)   create_jobfile_only=true;;
    300303       (G)   global_revision=$OPTARG; prc="$prc -G'$OPTARG'";;
    301        (h)   configuration_identifier=$OPTARG; prc="$prc -h$OPTARG";;
    302304       (i)   run_id_number=$OPTARG;;
    303305       (j)   running_in_batch_mode=true;;
     
    307309       (O)   use_openmp=true; threads_per_task=$OPTARG; prc="$prc -O$OPTARG";;
    308310       (q)   queue=$OPTARG; prc="$prc -q$OPTARG";;
     311       (r)   run_identifier=$OPTARG; prc="$prc -r$OPTARG";;
    309312       (R)   return_address=$OPTARG;;
    310313       (s)   source_list=$OPTARG;;
     
    344347    printf "\n        -b    batch-job on local machine               ---"
    345348    printf "\n        -B    do not delete temporary directory at end ---"
    346     printf "\n        -d    run identifier                           test"
     349    printf "\n        -c    configuration identifier                 \"default\" "
    347350    printf "\n        -F    create batch job file only               ---"
    348     printf "\n        -h    host configuration                       \"default\" "
    349351    printf "\n        -k    keep data from previous run"
    350352    printf "\n        -m    memory demand in MB (batch-jobs)         0 MB"
     
    352354    printf "\n        -O    threads per openMP task                  ---"
    353355    printf "\n        -q    queue                                    \"$queue\" "
     356    printf "\n        -r    run identifier                           test"
    354357    printf "\n        -s    filenames of routines to be compiled     \"\" "
    355358    printf "\n              must end with .f, .f90, .F, or .c !"
     
    387390 printf "\n*** $version "
    388391 printf "\n    will be executed.     Please wait ..."
    389 
    390 
    391     # FOR COMPATIBILITY REASONS SET OLD ENVIRONMENT VARIABLES
    392  export fname=$run_identifier
    393  export jobname=$run_identifier
    394392
    395393
     
    18691867       if [[ $do_trace = true ]]
    18701868       then
    1871           palmbuild  -h $configuration_identifier
     1869          palmbuild  -c $configuration_identifier
    18721870       else
    1873           palmbuild  -v  -h $configuration_identifier
     1871          palmbuild  -v  -c $configuration_identifier
    18741872       fi
    18751873
     
    18881886
    18891887       # NOW CREATE THE SOURCES_FOR_RUN FOLDER
    1890     palmbuild  -v  $use_existing_sources_folder  -h $configuration_identifier  -d $run_identifier
     1888    palmbuild  -v  $use_existing_sources_folder  -c $configuration_identifier  -r $run_identifier
    18911889
    18921890    if [[ ${PIPESTATUS[0]} != 0 ]]
     
    27782776          printf "\n$dashes\n  +++ creating restart run failed \n"
    27792777          locat=create_restart
     2778          rm  palmrun_restart.log
    27802779          exit
    2781           rm  palmrun_restart.log
    27822780       else
    27832781          printf "\n$dashes\n  *** restart run initiated \n"
     
    28152813
    28162814       # BUILD THE PALMRUN-COMMAND TO BE CALLED IN THE BATCH-JOB
    2817     palmrun_com="$palmrun_script_name -d $run_identifier -h $configuration_identifier -m $memory -t $cpumax -q $queue -i $run_id_number -U $local_username"
     2815    palmrun_com="$palmrun_script_name -r $run_identifier -c $configuration_identifier -m $memory -t $cpumax -q $queue -i $run_id_number -U $local_username"
    28182816    [[ "$activation_string_list" != "" ]]  &&  palmrun_com=${palmrun_com}" -a \"$activation_string_list\""
    28192817    [[ "$global_revision" != "" ]]  &&  palmrun_com=${palmrun_com}" -G \"$global_revision\""
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