Ignore:
Timestamp:
Oct 21, 2016 3:57:50 PM (8 years ago)
Author:
gronemeier
Message:

updated mrun.config blogs for HLRNIII

File:
1 edited

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  • palm/trunk/SCRIPTS/.mrun.config.imuk_hlrnIII

    r1959 r2034  
    5353#
    5454# HLRN-III Hannover
    55 %tmp_user_catalog    /gfs2/work/<replace_by_your_HLRN-III_username>     lccrayh parallel
    56 %tmp_data_catalog    /gfs2/work/<replace_by_your_HLRN-III_username>     lccrayh parallel
     55%tmp_user_catalog    /gfs2/tmp/<replace_by_your_HLRN-III_username>      lccrayh parallel
     56%tmp_data_catalog    /gfs2/work/<replace_by_your_HLRN-III_username>/palm_restart_data     lccrayh parallel
    5757%compiler_name       ftn                                                lccrayh parallel
    5858%compiler_name_ser   ftn                                                lccrayh parallel
    5959%cpp_options         -e:Z:-DMPI_REAL=MPI_DOUBLE_PRECISION:-DMPI_2REAL=MPI_2DOUBLE_PRECISION:-D__netcdf:-D__netcdf4:-D__netcdf4_parallel:-D__fftw   lccrayh parallel
    6060%mopts               -j:4                                               lccrayh parallel
    61 %fopts               -em:-O3:-hnoomp:-hfp3:-hdynamic                    lccrayh parallel
    62 %lopts               -em:-O3:-hnoomp:-hfp3:-hdynamic:-dynamic           lccrayh parallel
     61%fopts               -em:-K:trap=fp:-O3:-hnoomp:-hnoacc:-hfp3:-hdynamic           lccrayh parallel
     62%lopts               -em:-K:trap=fp:-O3:-hnoomp:-hnoacc:-hfp3:-hdynamic:-dynamic  lccrayh parallel
    6363%remote_username     <replace_by_your_HLRN-III_username>                lccrayh parallel
    6464%memory              2300                                               lccrayh parallel
    6565%modules             fftw:cray-hdf5-parallel:cray-netcdf-hdf5parallel   lccrayh parallel
     66%login_init_cmd      module:unload:cray-netcdf                          lccrayh parallel
    6667#
    6768# HLRN-III Hannover debug/trace mode
    68 %tmp_user_catalog    /gfs2/work/<replace_by_your_HLRN-III_username>     lccrayh parallel trace
    69 %tmp_data_catalog    /gfs2/work/<replace_by_your_HLRN-III_username>     lccrayh parallel trace
     69%tmp_user_catalog    /gfs2/tmp/<replace_by_your_HLRN-III_username>      lccrayh parallel trace
     70%tmp_data_catalog    /gfs2/work/<replace_by_your_HLRN-III_username>/palm_restart_data     lccrayh parallel trace
    7071%compiler_name       ftn                                                lccrayh parallel trace
    7172%compiler_name_ser   ftn                                                lccrayh parallel trace
    7273%cpp_options         -e:Z:-DMPI_REAL=MPI_DOUBLE_PRECISION:-DMPI_2REAL=MPI_2DOUBLE_PRECISION:-D__netcdf:-D__netcdf4:-D__netcdf4_parallel:-D__fftw   lccrayh parallel trace
    7374%mopts               -j:4                                               lccrayh parallel trace
    74 %fopts               -eD:-em:-g:-R:b:-K:trap=fp:-O0:-hnoomp             lccrayh parallel trace
    75 %lopts               -eD:-em:-g:-R:b:-K:trap=fp:-O0:-hnoomp             lccrayh parallel trace
     75%fopts               -eD:-em:-g:-R:b:-K:trap=fp:-O0:-hnoomp:-hnoacc     lccrayh parallel trace
     76%lopts               -eD:-em:-g:-R:b:-K:trap=fp:-O0:-hnoomp:-hnoacc     lccrayh parallel trace
    7677%remote_username     <replace_by_your_HLRN-III_username>                lccrayh parallel trace
    7778%memory              2300                                               lccrayh parallel trace
    7879%modules             fftw:cray-hdf5-parallel:cray-netcdf-hdf5parallel   lccrayh parallel trace
     80%login_init_cmd      module:unload:cray-netcdf                          lccrayh parallel trace
     81#
     82# HLRN-III Hannover haswell
     83%tmp_user_catalog    /gfs2/tmp/<replace_by_your_HLRN-III_username>      lccrayh parallel has
     84%tmp_data_catalog    /gfs2/work/<replace_by_your_HLRN-III_username>/palm_restart_data     lccrayh parallel has
     85%compiler_name       ftn                                                lccrayh parallel has
     86%compiler_name_ser   ftn                                                lccrayh parallel has
     87%cpp_options         -e:Z:-DMPI_REAL=MPI_DOUBLE_PRECISION:-DMPI_2REAL=MPI_2DOUBLE_PRECISION:-D__netcdf:-D__netcdf4:-D__netcdf4_parallel:-D__fftw   lccrayh parallel has
     88%feature             mpp2                                               lccrayh parallel has
     89%mopts               -j:4                                               lccrayh parallel has
     90%fopts               -em:-K:trap=fp:-O3:-hnoomp:-hnoacc:-hfp3:-hdynamic lccrayh parallel has
     91%lopts               -em:-K:trap=fp:-O3:-hnoomp:-hnoacc:-hfp3:-hdynamic:-dynamic   lccrayh parallel has
     92%remote_username     <replace_by_your_HLRN-III_username>                lccrayh parallel has
     93%memory              2300                                               lccrayh parallel has
     94%modules             fftw:cray-hdf5-parallel:cray-netcdf-hdf5parallel:craype-haswell   lccrayh parallel has
     95%login_init_cmd      module:unload:cray-netcdf:craype-ivybridge         lccrayh parallel has
    7996#
    8097# HLRN-III Berlin
    81 %tmp_user_catalog    /gfs2/work/<replace_by_your_HLRN-III_username>     lccrayb parallel
    82 %tmp_data_catalog    /gfs2/work/<replace_by_your_HLRN-III_username>     lccrayb parallel
     98%tmp_user_catalog    /gfs2/tmp/<replace_by_your_HLRN-III_username>     lccrayb parallel
     99%tmp_data_catalog    /gfs2/work/<replace_by_your_HLRN-III_username>/palm_restart_data     lccrayb parallel
    83100%compiler_name       ftn                                                lccrayb parallel
    84101%compiler_name_ser   ftn                                                lccrayb parallel
    85102%cpp_options         -e:Z:-DMPI_REAL=MPI_DOUBLE_PRECISION:-DMPI_2REAL=MPI_2DOUBLE_PRECISION:-D__netcdf:-D__netcdf4:-D__netcdf4_parallel:-D__fftw   lccrayb parallel
    86103%mopts               -j:4                                               lccrayb parallel
    87 %fopts               -em:-O3:-hnoomp:-hfp3:-hdynamic                    lccrayb parallel
    88 %lopts               -em:-O3:-hnoomp:-hfp3:-hdynamic:-dynamic           lccrayb parallel
     104%fopts               -em:-K:trap=fp:-O3:-hnoomp:-hnoacc:-hfp3:-hdynamic           lccrayb parallel
     105%lopts               -em:-K:trap=fp:-O3:-hnoomp:-hnoacc:-hfp3:-hdynamic:-dynamic  lccrayb parallel
    89106%remote_username     <replace_by_your_HLRN-III_username>                lccrayb parallel
    90107%memory              2300                                               lccrayb parallel
    91108%modules             fftw:cray-hdf5-parallel:cray-netcdf-hdf5parallel   lccrayb parallel
     109%login_init_cmd      module:unload:cray-netcdf                          lccrayb parallel
    92110#
    93111# HLRN-III Berlin debug/trace mode
    94 %tmp_user_catalog    /gfs2/work/<replace_by_your_HLRN-III_username>     lccrayb parallel trace
    95 %tmp_data_catalog    /gfs2/work/<replace_by_your_HLRN-III_username>     lccrayb parallel trace
     112%tmp_user_catalog    /gfs2/tmp/<replace_by_your_HLRN-III_username>     lccrayb parallel trace
     113%tmp_data_catalog    /gfs2/work/<replace_by_your_HLRN-III_username>/palm_restart_data     lccrayb parallel trace
    96114%compiler_name       ftn                                                lccrayb parallel trace
    97115%compiler_name_ser   ftn                                                lccrayb parallel trace
    98116%cpp_options         -e:Z:-DMPI_REAL=MPI_DOUBLE_PRECISION:-DMPI_2REAL=MPI_2DOUBLE_PRECISION:-D__netcdf:-D__netcdf4:-D__netcdf4_parallel:-D__fftw   lccrayb parallel trace
    99117%mopts               -j:4                                               lccrayb parallel trace
    100 %fopts               -eD:-em:-g:-R:b:-K:trap=fp:-O0:-hnoomp             lccrayb parallel trace
    101 %lopts               -eD:-em:-g:-R:b:-K:trap=fp:-O0:-hnoomp             lccrayb parallel trace
     118%fopts               -eD:-em:-g:-R:b:-K:trap=fp:-O0:-hnoomp:-hnoacc     lccrayb parallel trace
     119%lopts               -eD:-em:-g:-R:b:-K:trap=fp:-O0:-hnoomp:-hnoacc     lccrayb parallel trace
    102120%remote_username     <replace_by_your_HLRN-III_username>                lccrayb parallel trace
    103121%memory              2300                                               lccrayb parallel trace
    104122%modules             fftw:cray-hdf5-parallel:cray-netcdf-hdf5parallel   lccrayb parallel trace
    105 #
    106 %write_binary                true                             restart
     123%login_init_cmd      module:unload:cray-netcdf                          lccrayb parallel trace
     124#
     125%write_binary        true                             restart
    107126#
    108127#----------------------------------------------------------------------------
     
    112131IC:[[ \$localhost = lccrayb ]]  &&  export ATP_ENABLED=1
    113132IC:[[ \$localhost = lccrayb ]]  &&  export MPICH_GNI_BTE_MULTI_CHANNEL=disabled
     133#IC:[[ \$localhost = lccrayb ]]  &&  export APRUN_XFER_LIMITS=1
     134#IC:[[ \$localhost = lccrayb ]]  &&  export APRUN_XFER_STACK_LIMIT=0
     135#IC:[[ \$localhost = lccrayb ]]  &&  ulimit -v unlimited
     136#IC:[[ \$localhost = lccrayb ]]  &&  ulimit -s unlimited
     137#IC:[[ \$localhost = lccrayb ]]  &&  export MPICH_MPIIO_HINTS_DISPLAY=1
     138#IC:[[ \$localhost = lccrayb ]]  &&  export MPICH_MPIIO_STATS=1
     139#IC:[[ \$localhost = lccrayb ]]  &&  E8="=8"
     140#IC:[[ \$localhost = lccrayb ]]  &&  export MPICH_MPIIO_HINTS="*DATA_**:striping_factor"\$E8
    114141IC:[[ \$localhost = lccrayh ]]  &&  export ATP_ENABLED=1
    115142IC:[[ \$localhost = lccrayh ]]  &&  export MPICH_GNI_BTE_MULTI_CHANNEL=disabled
     143#IC:[[ \$localhost = lccrayh ]]  &&  export APRUN_XFER_LIMITS=1
     144#IC:[[ \$localhost = lccrayh ]]  &&  export APRUN_XFER_STACK_LIMIT=0
     145#IC:[[ \$localhost = lccrayh ]]  &&  ulimit -v unlimited
     146#IC:[[ \$localhost = lccrayh ]]  &&  ulimit -s unlimited
     147#IC:[[ \$localhost = lccrayh ]]  &&  export MPICH_MPIIO_HINTS_DISPLAY=1
     148#IC:[[ \$localhost = lccrayh ]]  &&  export MPICH_MPIIO_STATS=1
     149#IC:[[ \$localhost = lccrayh ]]  &&  E8="=8"
     150#IC:[[ \$localhost = lccrayh ]]  &&  export MPICH_MPIIO_HINTS="*DATA_**:striping_factor"\$E8
    116151#
    117152#----------------------------------------------------------------------------
     
    119154#----------------------------------------------------------------------------
    120155EC:[[ \$locat = execution ]]  &&  cat  RUN_CONTROL
    121 EC:pwd; ls -al
    122156#
    123157#----------------------------------------------------------------------------
     
    136170LSF_DATA                 in:locopt     d3#:d3f  $base_data/$fname/INPUT    _lsf
    137171WTM_DATA                 in:locopt     d3#:d3f  $base_data/$fname/INPUT    _wtm
    138 BININ                    in:loc:flpe   d3f      $base_data/$fname/RESTART  _d3d
     172BININ                    in:loc:flpe   d3f:cycfill  $base_data/$fname/RESTART  _d3d
    139173PARTICLE_RESTART_DATA_IN in:loc:flpe   prtf     $base_data/$fname/RESTART  _rprt
    140174DATA_1D_FL_NETCDF        in:locopt     flf      $base_data/$fname/OUTPUT   _fl     nc
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