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Ignore:
Timestamp:
Feb 10, 2013 1:47:43 AM (11 years ago)
Author:
raasch
Message:

adjustments for Forwind cluster (lcflow) and Kuyshu University computing center (hayaka -lckyuh); further small adjustments for lckyut

File:
1 edited

Legend:

Unmodified
Added
Removed

  • palm/trunk/SCRIPTS/.mrun.config.forwind

    r1098 r1099  
    55%mainprog          palm.f90
    66%base_directory    $HOME/palm/current_version
    7 %base_data         $base_directory/JOBS
    8 %output_data       /data/work/fw/<replace by your username>/palm/current_version/JOBS
    9 # Replace <replace by your username> by your username on FLOW. Replace "/fw/" by "/iwes/" if
    10 # your user directory resides in /iwes/.
     7%base_data         ~/palm/current_version/jobs
     8################################################################################
     9# Replace <<REPLACE BY YOUR USERNAME> by your username on FLOW. Replace "/fw/"
     10# by "/iwes/" if your user directory resides in /iwes/.
     11################################################################################
     12%output_data       /data/work/fw/<REPLACE BY YOUR USERNAME>/palm/current_version/JOBS
    1113%source_path       $base_directory/trunk/SOURCE
    12 %add_source_path   $base_directory/USER_CODE/$fname
    13 %depository_path   $base_directory/MAKE_DEPOSITORY
     14%add_source_path   $base_directory/user_code/$fname
     15%depository_path   $base_directory/make_depository
    1416%use_makefile      true
    1517#
    … …  
    1921%host_identifier       cfdh*            lcflow
    2022%host_identifier       cfdx*            lcflow
    21 #
     23
     24################################################################################
     25# Replace <YOUR_DESKTOP_HOSTNAME> by the hostname of your desktop
     26# an uncomment following line to enable job submission from you local desktop
     27################################################################################
     28#%host_identifier       <YOUR_DESKTOP_HOSTNAME>           lcfor
     29
     30################################################################################
     31# Configuration for Ubuntu Linux 12.04 LTS with gcc (4.6.3) and OpenMPI (1.4.3)
    2232#
    2333# The next block contains all informations for compiling the PALM code
    24 # and for generating and running the PALM executable using MPI. Replace <user-id>
     34# and for generating and running the PALM executable using MPI on a Linux machine
     35# with gcc and OpenMPI. Replace <LOCAL_USERNAME> with your username on your
     36# local machine
     37#
     38# NOTE: - Other hosts may require different settings.
     39#       - following packages are required:
     40#         openmpi-common, libopenmpi-dev, libopenmpi, libnetcdf, libnetcdf-dev,
     41#         gcc
     42#
     43################################################################################
     44%remote_username   <LOCAL_USERNAME>                                          lcfor parallel
     45%tmp_user_catalog  /tmp                                                      lcfor parallel
     46%tmp_data_catalog  /tmp                                                      lcfor parallel
     47%compiler_name     mpif90                                                    lcfor parallel
     48%compiler_name_ser gfortran                                                  lcfor parallel
     49%cpp_options       -DMPI_REAL=MPI_DOUBLE_PRECISION:-DMPI_2REAL=MPI_2DOUBLE_PRECISION:-D__lc:-D__netcdf:-D__netcdf4:-D__parallel  lcfor parallel
     50%netcdf_inc        -I/opt/netcdf/4.2.1.1/include                             lcfor parallel
     51%netcdf_lib        -lnetcdff:-lnetcdf                                        lcfor parallel
     52%mopts             -j:4                                                      lcfor parallel
     53%fopts             -Ofast:-IPA:-mtune=native:-march=native:-cpp:-fdefault-real-8:-fbackslash:-fconvert=little-endian   lcfor parallel
     54%lopts             -Ofast:-IPA:-mtune=native:-march=native:-cpp:-fdefault-real-8:-fbackslash                           lcfor parallel
     55
     56################################################################################
     57# Configuration for FLOW
     58#
     59# The next block contains all informations for compiling the PALM code
     60# and for generating and running the PALM executable using MPI. Replace <USERNAME_FLOW>
    2561# with your username on FLOW and if necessary "/fw/" by "/iwes/".
    2662# The following 'lcflow parallel' block assumes PALM compilation and execution
    2763# on host flow. Please note that other hosts may require different settings.
    28 #
    29 %remote_username   <replace by your username>                                      lcflow parallel
    30 %tmp_user_catalog  /data/work/fw/<replace by your username>/tmp                    lcflow parallel
    31 %tmp_data_catalog  /data/work/fw/<replace by your username>/palm_restart_data      lcflow parallel
    32 %compiler_name     mpiifort                                                        lcflow parallel
    33 %compiler_name_ser ifort                                                           lcflow parallel
    34 %cpp_options       -cpp:-DMPI_REAL=MPI_DOUBLE_PRECISION:-DMPI_2REAL=MPI_2DOUBLE_PRECISION:-D__netcdf:-D__netcdf4:-D__lc:-D__parallel     lcflow parallel
    35 %netcdf_inc        -I$$NETCDFF_INCLUDE                                             lcflow parallel
    36 %netcdf_lib        -L$$NETCDFF_DIR:-lnetcdff:-L$$NETCDF_DIR:-lnetcdf               lcflow parallel
    37 %mopts             -j:4                                                            lcflow parallel
    38 %fopts             -xSSE4.2:-O3:-r8:-align:all:-ftz:-fno-alias:-no-scalar-rep:-ip:-nbs:-convert:little_endian                lcflow parallel
    39 %lopts             -xSSE4.2:-O3:-r8:-align:all:-ftz:-fno-alias:-no-scalar-rep:-ip:-nbs:-limf:-lm:-Vaxlib                               lcflow parallel
    40 %login_init_cmd    .:/cm/local/apps/environment-modules/3.2.6/Modules/3.2.6/init/bash\;:MODULEPATH=/cm/shared/modulefiles/   lcflow parallel
    41 %modules           netcdf/4.2.1.1/intel/64/2011.0.013:netcdf-fortran/4.2/intel/64/2011.0.013:intel/ics/64/2011.0.013:intel/impi/4.0.1.007/64:hdf5/1.8.9/intel/64/2011.0.013:qt4/4.8.2  lcflow parallel
     64################################################################################
     65%remote_username   <USERNAME_FLOW>                                                                                               lcflow parallel
     66%tmp_user_catalog  /data/work/fw/$remote_username/tmp                                                                            lcflow parallel
     67%tmp_data_catalog  /data/work/fw/$remote_username/palm_restart_data                                                              lcflow parallel
     68%compiler_name     mpiifort                                                                                                      lcflow parallel
     69%compiler_name_ser ifort                                                                                                         lcflow parallel
     70%cpp_options       -DMPI_REAL=MPI_DOUBLE_PRECISION:-DMPI_2REAL=MPI_2DOUBLE_PRECISION:-D__lc:-D__netcdf:-D__netcdf4:-D__parallel  lcflow parallel
     71%netcdf_inc        -I/cm/shared/apps/netcdf-fortran/4.2/intel/64/2011.0.013/include                                              lcflow parallel
     72%netcdf_lib        -L/cm/shared/apps/netcdf-fortran/4.2/intel/64/2011.0.013/lib:-lnetcdff:-L/cm/shared/apps/netcdf/4.2.1.1/intel/64/2011.0.013/lib:-lnetcdf:-L/cm/shared/apps/hdf5/1.8.9/intel/64/2011.0.013/lib:-Wl,-rpath:/cm/shared/apps/hdf5/1.8.9/intel/64/2011.0.013/lib:-Wl,-rpath:/cm/shared/apps/netcdf/4.2.1.1/intel/64/2011.0.013/lib:-Wl,-rpath:/cm/shared/apps/netcdf-fortran/4.2/intel/64/2011.0.013/lib       lcflow parallel
     73%mopts             -j:8                                                                                                          lcflow parallel
     74%fopts             -xhost:-O3:-fpp:-r8:-align:all:-ftz:-fno-alias:-no-scalar-rep:-no-prec-sqrt:-ip:-nbs:-convert:little_endian:-static-intel   lcflow parallel
     75%lopts             -xhost:-O3:-fpp:-r8:-align:all:-ftz:-fno-alias:-no-scalar-rep:-no-prec-sqrt:-ip:-nbs:-static-intel:-Wl,-rpath:/cm/shared/apps/intel/ics-2011.0.013/composerxe-2011.0.084/compiler/lib/intel64          lcflow parallel
     76%login_init_cmd    .:/cm/local/apps/environment-modules/3.2.6/Modules/3.2.6/init/bash\;:MODULEPATH=/cm/shared/modulefiles/                     lcflow parallel
     77%modules           sge/6.2u5p2:netcdf/4.2.1.1/intel/64/2011.0.013:netcdf-fortran/4.2/intel/64/2011.0.013:intel/ics/64/2011.0.013:intel/impi/64/4.0.1.007:hdf5/1.8.9/intel/64/2011.0.013:qt4     lcflow parallel
     78%disc_space        50                                                                                                            lcflow parallel
    4279#
    4380#
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