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source: palm/trunk/UTIL/combine_plot_fields.f90 @ 269

Last change on this file since 269 was 226, checked in by raasch, 16 years ago
preparations for the next release
Property svn:keywords set to `Id`
File size: 26.6 KB

Rev	Line
[1]	1	PROGRAM combine_plot_fields
	2
	3	!------------------------------------------------------------------------------!
	4	! Actual revisions:
	5	! -----------------
[226]	6	!
	7	!
	8	! Former revisions:
	9	! -----------------
	10	! $Id: combine_plot_fields.f90 226 2009-02-02 07:39:34Z weinreis $
	11	!
	12	! 210 2008-11-06 08:54:02Z raasch
[210]	13	! Size of pf3d adjusted to the required output size (1 gridpoint less, along
	14	! all three dimensions), because output of a subset of the data
	15	! (pf3d(nxa:nxe...) in the NF90_PUT_VAR statement caused segmentation fault
	16	! with the INTEL compiler.
[191]	17	! Subdomain data are read into temporary arrays pf_tmp/pf3d_tmp in order to
	18	! avoid INTEL compiler warnings about (automatic) creation of temporary arrays
[179]	19	! Bugfix: three misplaced #endif directives
[1]	20	!
[139]	21	! 114 2007-10-10 00:03:15Z raasch
	22	! Bugfix: model_string needed a default value
	23	!
[114]	24	! Aug 07 Loop for processing of output by coupled runs, id_string does not
	25	! contain modus any longer
	26	!
[1]	27	! 18/01/06 Output of time-averaged data
	28	!
	29	! 25/05/05 Errors removed
	30	!
	31	! 26/04/05 Output in NetCDF format, iso2d and avs output only if parameter
	32	! file exists
	33	!
	34	! 31/10/01 All comments and messages translated into English
	35	!
	36	! 23/02/99 Keine Bearbeitung komprimierter 3D-Daten
	37	! Ursprungsversion vom 28/07/97
	38	!
	39	!
	40	! Description:
	41	! ------------
	42	! This routine combines data of the PALM-subdomains into one file. In PALM
	43	! every processor element opens its own file and writes 2D- or 3D-binary-data
	44	! into it (different files are opened for xy-, xz-, yz-cross-sections and
	45	! 3D-data). For plotting or analyzing these PE-data have to be collected and
	46	! to be put into single files, which is done by this routine.
	47	! Output format is NetCDF. Additionally, a data are output in a binary format
	48	! readable by ISO2D-software (cross-sections) and by AVS (3D-data).
	49	!
	50	! This routine must be compiled with:
	51	! decalpha:
	52	! f95 -cpp -D__netcdf -fast -r8 -I/usr/local/netcdf-3.5.1/include
	53	! -L/usr/local/netcdf-3.5.1/lib -lnetcdf
	54	! IBM-Regatta:
	55	! xlf95 -qsuffix=cpp=f90 -WF,-D__netcdf -qrealsize=8 -q64 -qmaxmem=-1 -Q
	56	! -I /aws/dataformats/netcdf-3.6.0-p1/64-32/include-64
	57	! -L/aws/dataformats/netcdf-3.6.0-p1/64-32/lib -lnetcdf -O3
	58	! IBM-Regatta KISTI:
	59	! xlf95 -qsuffix=cpp=f90 -WF,-D__netcdf -qrealsize=8 -q64 -qmaxmem=-1 -Q
	60	! -I /applic/netcdf64/src/f90
	61	! -L/applic/lib/NETCDF64 -lnetcdf -O3
	62	! IBM-Regatta Yonsei (gfdl5):
	63	! xlf95 -qsuffix=cpp=f90 -WF,-D__netcdf -qrealsize=8 -q64 -qmaxmem=-1 -Q
	64	! -I /usr1/users/raasch/pub/netcdf-3.6.0-p1/include
	65	! -L/usr1/users/raasch/pub/netcdf-3.6.0-p1/lib -lnetcdf -O3
	66	! IMUK:
	67	! ifort combine...f90 -o combine...x
	68	! -cpp -D__netcdf -I /muksoft/packages/netcdf/linux/include -axW -r8 -nbs
	69	! -Vaxlib -L /muksoft/packages/netcdf/linux/lib -lnetcdf
	70	! NEC-SX6:
	71	! sxf90 combine...f90 -o combine...x
	72	! -I /pool/SX-6/netcdf/netcdf-3.6.0-p1/include -C hopt -Wf '-A idbl4'
	73	! -D__netcdf -L/pool/SX-6/netcdf/netcdf-3.6.0-p1/lib -lnetcdf
	74	! Sun Fire X4600
	75	! pgf95 combine...f90 -o combine...x
	76	! -Mpreprocess -D__netcdf -I /home/usr5/mkanda/netcdf-3.6.1/src/f90 -r8
	77	! -fast -L/home/usr5/mkanda/netcdf-3.6.1/src/libsrc -lnetcdf
[108]	78	! FIMM:
	79	! ifort combine...f90 -o combine...x
	80	! -axW -cpp -openmp -r8 -nbs -convert little_endian -D__netcdf
	81	! -I /local/netcdf/include -Vaxlib -L/local/netcdf/lib -lnetcdf
[1]	82	!------------------------------------------------------------------------------!
	83
	84	#if defined( __netcdf )
	85	USE netcdf
	86	#endif
	87
	88	IMPLICIT NONE
	89
	90	!
	91	!-- Local variables
[108]	92	CHARACTER (LEN=2) :: modus, model_string
	93	CHARACTER (LEN=4) :: id_string
[1]	94	CHARACTER (LEN=10) :: dimname, var_name
	95	CHARACTER (LEN=40) :: filename
	96
	97	CHARACTER (LEN=2000), DIMENSION(0:1) :: var_list
	98
	99	INTEGER, PARAMETER :: spk = SELECTED_REAL_KIND( 6 )
	100
	101	INTEGER :: av, danz, i, id, &
[210]	102	j, k, model, models, nc_stat, nxa, nxag, nxe, nxeg, nya, &
[1]	103	nyag, nye, nyeg, nza, nzag, nze, nzeg, pos, time_step, xa, xe, &
[210]	104	xxa, xxe, ya, ye, yya, yye, za, ze, zza, zze
[1]	105
[108]	106	INTEGER, DIMENSION(0:1) :: current_level, current_var, fanz, id_set, &
	107	id_var_time, num_var
[1]	108
	109	INTEGER, DIMENSION(4) :: id_dims_loc
	110
	111	INTEGER, DIMENSION(0:1,4) :: id_dims
	112
	113	INTEGER, DIMENSION(0:1,1000) :: id_var, levels
	114
	115	LOGICAL :: avs_output, compressed, found, iso2d_output, netcdf_output, &
	116	netcdf_0, netcdf_1
	117
	118	REAL :: dx, simulated_time
	119	REAL, DIMENSION(:), ALLOCATABLE :: eta, ho, hu
[191]	120	REAL, DIMENSION(:,:), ALLOCATABLE :: pf, pf_tmp
	121	REAL(spk), DIMENSION(:,:,:), ALLOCATABLE :: pf3d, pf3d_tmp
[1]	122
	123	PRINT*, ''
[114]	124	PRINT*, ''
[108]	125	PRINT, ' combine_plot_fields *'
[114]	126
	127	!
	128	!-- Find out if a coupled run has been carried out
[108]	129	INQUIRE( FILE='COUPLING_PORT_OPENED', EXIST=found )
	130	IF ( found ) THEN
	131	models = 2
	132	PRINT*, ' coupled run'
	133	ELSE
	134	models = 1
	135	PRINT*, ' uncoupled run'
	136	ENDIF
[114]	137
	138	!
	139	!-- Do everything for each model
[108]	140	DO model = 1, models
[114]	141	!
	142	!-- Set the model string used to identify the filenames
	143	model_string = ''
[108]	144	IF ( models == 2 ) THEN
	145	PRINT*, ''
	146	PRINT, ' combine_plot_fields *'
	147	IF ( model == 2 ) THEN
[114]	148	model_string = '_O'
[108]	149	PRINT*, ' now combining ocean data'
	150	PRINT*, ' ========================'
	151	ELSE
	152	PRINT*, ' now combining atmosphere data'
	153	PRINT*, ' ============================='
	154	ENDIF
	155	ENDIF
[1]	156	!
[108]	157	!-- 2D-arrays for ISO2D
	158	!-- Main loop for the three different cross-sections, starting with
	159	!-- xy-section
	160	modus = 'XY'
	161	PRINT*, ''
	162	DO WHILE ( modus == 'XY' .OR. modus == 'XZ' .OR. modus == 'YZ' )
[1]	163	!
[108]	164	!-- Check, if file from PE0 exists. If it does not exist, PALM did not
	165	!-- create any output for this cross-section.
	166	danz = 0
	167	WRITE (id_string,'(I4.4)') danz
	168	INQUIRE ( &
	169	FILE='PLOT2D_'//modus//TRIM( model_string )//'_'//id_string, &
	170	EXIST=found )
	171	!
	172	!-- Find out the number of files (equal to the number of PEs which
	173	!-- have been used in PALM) and open them
	174	DO WHILE ( found )
[1]	175
[108]	176	OPEN ( danz+110, &
	177	FILE='PLOT2D_'//modus//TRIM( model_string )//'_'//id_string, &
	178	FORM='UNFORMATTED' )
	179	danz = danz + 1
	180	WRITE (id_string,'(I4.4)') danz
	181	INQUIRE ( &
	182	FILE='PLOT2D_'//modus//TRIM( model_string )//'_'//id_string, &
	183	EXIST=found )
[1]	184
[108]	185	ENDDO
[1]	186
	187	!
[108]	188	!-- Inquire whether an iso2d parameter file exists
	189	INQUIRE( FILE='PLOT2D_'//modus//'_GLOBAL'//TRIM( model_string ), &
	190	EXIST=iso2d_output )
[1]	191
	192	!
[108]	193	!-- Inquire whether a NetCDF file exists
	194	INQUIRE( FILE='DATA_2D_'//modus//'_NETCDF'//TRIM( model_string ), &
	195	EXIST=netcdf_0 )
[1]	196
	197	!
[108]	198	!-- Inquire whether a NetCDF file for time-averaged data exists
	199	INQUIRE( FILE='DATA_2D_'//modus//'_AV_NETCDF'//TRIM( model_string ),&
	200	EXIST=netcdf_1 )
[1]	201
[108]	202	IF ( netcdf_0 .OR. netcdf_1 ) THEN
	203	netcdf_output = .TRUE.
	204	ELSE
	205	netcdf_output = .FALSE.
	206	ENDIF
[1]	207
	208	!
[108]	209	!-- Info-output
	210	PRINT*, ''
	211	PRINT, ' combine_plot_fields *'
[1]	212	#if defined( __netcdf )
[108]	213	IF ( netcdf_output ) PRINT*, ' NetCDF output enabled'
[1]	214	#else
[108]	215	IF ( netcdf_output ) THEN
	216	PRINT*, '--- Sorry, no NetCDF support on this host'
	217	netcdf_output = .FALSE.
	218	ENDIF
[1]	219	#endif
[108]	220	IF ( danz /= 0 ) THEN
	221	PRINT*, ' ',modus,'-section: ', danz, ' file(s) found'
	222	ELSE
	223	PRINT*, ' no ', modus, '-section data available'
	224	ENDIF
[1]	225
[108]	226	IF ( netcdf_output .AND. danz /= 0 ) THEN
[1]	227	#if defined( __netcdf )
[108]	228	DO av = 0, 1
[1]	229
[108]	230	IF ( av == 0 .AND. .NOT. netcdf_0 ) CYCLE
	231	IF ( av == 1 .AND. .NOT. netcdf_1 ) CYCLE
[1]	232
	233	!
[108]	234	!-- Open NetCDF dataset
	235	IF ( av == 0 ) THEN
	236	filename = 'DATA_2D_'//modus//'_NETCDF' &
	237	//TRIM( model_string )
	238	ELSE
	239	filename = 'DATA_2D_'//modus//'_AV_NETCDF' &
	240	//TRIM( model_string )
	241	ENDIF
	242	nc_stat = NF90_OPEN( filename, NF90_WRITE, id_set(av) )
	243	IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 1 )
[1]	244
	245	!
[108]	246	!-- Get the list of variables (order of variables corresponds with
	247	!-- the order of data on the binary file)
	248	var_list(av) = ' ' ! GET_ATT does not assign trailing blanks
	249	nc_stat = NF90_GET_ATT( id_set(av), NF90_GLOBAL, 'VAR_LIST', &
	250	var_list(av) )
	251	IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 2 )
[1]	252
	253	!
[108]	254	!-- Inquire id of the time coordinate variable
	255	nc_stat = NF90_INQ_VARID( id_set(av), 'time', id_var_time(av) )
	256	IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 3 )
[1]	257
	258	!
[108]	259	!-- Count number of variables; there is one more semicolon in the
	260	!-- string than variable names
	261	num_var(av) = -1
	262	DO i = 1, LEN( var_list(av) )
	263	IF ( var_list(av)(i:i) == ';' ) num_var(av) = num_var(av) +1
	264	ENDDO
[1]	265
	266	!
[108]	267	!-- Extract the variable names from the list and inquire their
	268	!-- NetCDF IDs
	269	pos = INDEX( var_list(av), ';' )
[1]	270	!
[108]	271	!-- Loop over all variables
	272	DO i = 1, num_var(av)
[1]	273
	274	!
[108]	275	!-- Extract variable name from list
	276	var_list(av) = var_list(av)(pos+1:)
	277	pos = INDEX( var_list(av), ';' )
	278	var_name = var_list(av)(1:pos-1)
[1]	279
	280	!
[108]	281	!-- Get variable ID from name
	282	nc_stat = NF90_INQ_VARID( id_set(av), TRIM( var_name ), &
	283	id_var(av,i) )
	284	IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 4 )
[1]	285
	286	!
[108]	287	!-- Get number of x/y/z levels for that variable
	288	nc_stat = NF90_INQUIRE_VARIABLE( id_set(av), id_var(av,i), &
	289	dimids = id_dims_loc )
	290	IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 5 )
	291	id_dims(av,:) = id_dims_loc
[1]	292
	293	!
[108]	294	!-- Inquire dimension ID
	295	DO j = 1, 4
	296	nc_stat = NF90_INQUIRE_DIMENSION( id_set(av), &
	297	id_dims(av,j), dimname, levels(av,i) )
	298	IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 6 )
[1]	299
[108]	300	IF ( modus == 'XY' .AND. INDEX(dimname, 'z') /= 0 ) EXIT
	301	IF ( modus == 'XZ' .AND. INDEX(dimname, 'y') /= 0 ) EXIT
	302	IF ( modus == 'YZ' .AND. INDEX(dimname, 'x') /= 0 ) EXIT
	303	ENDDO
	304
[1]	305	ENDDO
	306
[108]	307	ENDDO ! av = 0, 1
[1]	308
[179]	309	#endif
[108]	310	ENDIF
[1]	311
	312	!
[108]	313	!-- Read the arrays, as long as the end of the file is reached
	314	fanz = 0
	315	current_level = 1
	316	current_var = 999999999
[1]	317
[108]	318	DO WHILE ( danz /= 0 )
[1]	319
	320	!
[108]	321	!-- Loop over all files (reading data of the subdomains)
	322	DO id = 0, danz-1
[1]	323	!
[108]	324	!-- File from PE0 contains special information at the beginning,
	325	!-- concerning the lower and upper indices of the total-domain used
	326	!-- in PALM (nxag, nxeg, nyag, nyeg) and the lower and upper indices
	327	!-- of the array to be writte by this routine (nxa, nxe, nya,
	328	!-- nye). Usually in the horizontal directions nxag=-1 and nxa=0
	329	!-- while all other variables have the same value (i.e. nxeg=nxe).
	330	!-- Allocate necessary arrays, open the output file and write
	331	!-- the coordinate informations needed by ISO2D.
	332	IF ( id == 0 .AND. fanz(0) == 0 .AND. fanz(1) == 0 ) THEN
	333	READ ( id+110 ) nxag, nxeg, nyag, nyeg
	334	READ ( id+110 ) nxa, nxe, nya, nye
	335	ALLOCATE ( eta(nya:nye), ho(nxa:nxe), hu(nxa:nxe), &
	336	pf(nxag:nxeg,nyag:nyeg) )
	337	READ ( id+110 ) dx, eta, hu, ho
[1]	338
[108]	339	IF ( iso2d_output ) THEN
	340	OPEN ( 2, FILE='PLOT2D_'//modus//TRIM( model_string ), &
	341	FORM='UNFORMATTED' )
	342	WRITE ( 2 ) dx, eta, hu, ho
	343	ENDIF
[1]	344	ENDIF
	345	!
[108]	346	!-- Read output time
	347	IF ( netcdf_output .AND. id == 0 ) THEN
	348	IF ( netcdf_1 ) THEN
	349	READ ( id+110, END=998 ) simulated_time, time_step, av
	350	ELSE
[1]	351	!
[108]	352	!-- For compatibility with earlier PALM versions
	353	READ ( id+110, END=998 ) simulated_time, time_step
	354	av = 0
	355	ENDIF
[1]	356	ENDIF
	357	!
[108]	358	!-- Read subdomain indices
	359	READ ( id+110, END=998 ) xa, xe, ya, ye
[1]	360	!
[108]	361	!-- IF the PE made no output (in case that no part of the
	362	!-- cross-section is situated on this PE), indices have the
	363	!-- value -1
	364	IF ( .NOT. ( xa == -1 .AND. xe == -1 .AND. &
	365	ya == -1 .AND. ye == -1 ) ) THEN
[1]	366	!
[108]	367	!-- Read the subdomain grid-point values
[191]	368	ALLOCATE( pf_tmp(xa:xe,ya:ye) )
	369	READ ( id+110 ) pf_tmp
	370	pf(xa:xe,ya:ye) = pf_tmp
	371	DEALLOCATE( pf_tmp )
[108]	372	ENDIF
	373	IF ( id == 0 ) fanz(av) = fanz(av) + 1
[1]	374
[108]	375	ENDDO
[1]	376	!
[108]	377	!-- Write the data of the total domain cross-section
	378	IF ( iso2d_output ) WRITE ( 2 ) pf(nxa:nxe,nya:nye)
[1]	379
	380	!
[108]	381	!-- Write same data in NetCDF format
	382	IF ( netcdf_output ) THEN
[1]	383	#if defined( __netcdf )
	384	!
[108]	385	!-- Check if a new time step has begun; if yes write data to time
	386	!-- axis
	387	IF ( current_var(av) > num_var(av) ) THEN
	388	current_var(av) = 1
	389	nc_stat = NF90_PUT_VAR( id_set(av), id_var_time(av), &
	390	(/ simulated_time /), &
	391	start = (/ time_step /), &
	392	count = (/ 1 /) )
	393	IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 7 )
	394	ENDIF
[1]	395
	396	!
[108]	397	!-- Now write the data; this is mode dependent
	398	SELECT CASE ( modus )
[1]	399
[108]	400	CASE ( 'XY' )
	401	nc_stat = NF90_PUT_VAR( id_set(av), &
[1]	402	id_var(av,current_var(av)), &
	403	pf(nxa:nxe,nya:nye), &
	404	start = (/ 1, 1, current_level(av), time_step /), &
	405	count = (/ nxe-nxa+1, nye-nya+1, 1, 1 /) )
[108]	406	IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 8)
[1]	407
[108]	408	CASE ( 'XZ' )
	409	nc_stat = NF90_PUT_VAR( id_set(av), &
[1]	410	id_var(av,current_var(av)), &
	411	pf(nxa:nxe,nya:nye), &
	412	start = (/ 1, current_level(av), 1, time_step /), &
	413	count = (/ nxe-nxa+1, 1, nye-nya+1, 1 /) )
[108]	414	IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 9)
[1]	415
[108]	416	CASE ( 'YZ' )
	417	nc_stat = NF90_PUT_VAR( id_set(av), &
[1]	418	id_var(av,current_var(av)), &
	419	pf(nxa:nxe,nya:nye), &
	420	start = (/ current_level(av), 1, 1, time_step /), &
	421	count = (/ 1, nxe-nxa+1, nye-nya+1, 1 /) )
[108]	422	IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error(10)
[1]	423
[108]	424	END SELECT
[1]	425
	426	!
[108]	427	!-- Data is written, check if max level is reached
	428	current_level(av) = current_level(av) + 1
	429	IF ( current_level(av) > levels(av,current_var(av)) ) THEN
	430	current_level(av) = 1
	431	current_var(av) = current_var(av) + 1
	432	ENDIF
	433
[179]	434	#endif
[1]	435	ENDIF
	436
[108]	437	ENDDO
[1]	438
[108]	439	998 IF ( danz /= 0 ) THEN
[1]	440	!
[108]	441	!-- Print the number of the arrays processed
	442	WRITE (*,'(16X,I4,A)') fanz(0)+fanz(1), ' array(s) processed'
	443	IF ( fanz(1) /= 0 ) THEN
	444	WRITE (*,'(16X,I4,A)') fanz(1), ' array(s) are time-averaged'
	445	ENDIF
[1]	446
	447	!
[108]	448	!-- Close all files and deallocate arrays
	449	DO id = 0, danz-1
	450	CLOSE ( id+110 )
	451	ENDDO
	452	CLOSE ( 2 )
	453	DEALLOCATE ( eta, ho, hu, pf )
	454	ENDIF
[1]	455
	456	!
[108]	457	!-- Close the NetCDF file
	458	IF ( netcdf_output .AND. danz /= 0 ) THEN
[1]	459	#if defined( __netcdf )
[108]	460	IF ( netcdf_0 ) THEN
	461	nc_stat = NF90_CLOSE( id_set(0) )
	462	IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 11 )
	463	ENDIF
	464	IF ( netcdf_1 ) THEN
	465	nc_stat = NF90_CLOSE( id_set(1) )
	466	IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 12 )
	467	ENDIF
	468	#endif
[1]	469	ENDIF
	470
	471	!
[108]	472	!-- Choose the next cross-section
	473	SELECT CASE ( modus )
	474	CASE ( 'XY' )
	475	modus = 'XZ'
	476	CASE ( 'XZ' )
	477	modus = 'YZ'
	478	CASE ( 'YZ' )
	479	modus = 'no'
	480	END SELECT
[1]	481
[108]	482	ENDDO
[1]	483
	484
	485	!
[108]	486	!-- Combine the 3D-arrays
[1]	487
	488	!
[108]	489	!-- Inquire whether an avs fld file exists
	490	INQUIRE( FILE='PLOT3D_FLD'//TRIM( model_string ), EXIST=avs_output )
[1]	491
	492	!
[108]	493	!-- Inquire whether a NetCDF file exists
	494	INQUIRE( FILE='DATA_3D_NETCDF'//TRIM( model_string ), EXIST=netcdf_0 )
[1]	495
	496	!
[108]	497	!-- Inquire whether a NetCDF file for time-averaged data exists
	498	INQUIRE( FILE='DATA_3D_AV_NETCDF'//TRIM( model_string ), EXIST=netcdf_1 )
[1]	499
[108]	500	IF ( netcdf_0 .OR. netcdf_1 ) THEN
	501	netcdf_output = .TRUE.
	502	ELSE
	503	netcdf_output = .FALSE.
	504	ENDIF
[1]	505
	506	!
[108]	507	!-- Check, if file from PE0 exists
	508	danz = 0
	509	WRITE (id_string,'(I4.4)') danz
	510	INQUIRE ( &
	511	FILE='PLOT3D_DATA'//TRIM( model_string )//'_'//TRIM( id_string ), &
	512	EXIST=found )
[1]	513
	514	!
[108]	515	!-- Combination only works, if data are not compressed. In that case,
	516	!-- PALM created a flag file (PLOT3D_COMPRESSED)
	517	INQUIRE ( FILE='PLOT3D_COMPRESSED'//TRIM( model_string ), &
	518	EXIST=compressed )
[1]	519
	520	!
[108]	521	!-- Find out the number of files and open them
	522	DO WHILE ( found .AND. .NOT. compressed )
[1]	523
[108]	524	OPEN ( danz+110, &
	525	FILE='PLOT3D_DATA'//TRIM( model_string )//'_'//TRIM(id_string), &
	526	FORM='UNFORMATTED')
	527	danz = danz + 1
	528	WRITE (id_string,'(I4.4)') danz
	529	INQUIRE ( &
	530	FILE='PLOT3D_DATA'//TRIM( model_string )//'_'//TRIM(id_string), &
	531	EXIST=found )
[1]	532
[108]	533	ENDDO
[1]	534
	535	!
[108]	536	!-- Info-output
	537	PRINT*, ' '
	538	PRINT, ' combine_plot_fields *'
[1]	539	#if defined( __netcdf )
	540	IF ( netcdf_output ) PRINT*, ' NetCDF output enabled'
	541	#else
	542	IF ( netcdf_output ) THEN
	543	PRINT*, '--- Sorry, no NetCDF support on this host'
	544	netcdf_output = .FALSE.
	545	ENDIF
	546	#endif
[108]	547	IF ( danz /= 0 ) THEN
	548	PRINT*, ' 3D-data: ', danz, ' file(s) found'
[1]	549	ELSE
[108]	550	IF ( found .AND. compressed ) THEN
	551	PRINT*, '+++ no 3D-data processing, since data are compressed'
	552	ELSE
	553	PRINT*, ' no 3D-data file available'
	554	ENDIF
[1]	555	ENDIF
	556
[108]	557	IF ( netcdf_output .AND. danz /= 0 ) THEN
[1]	558	#if defined( __netcdf )
[108]	559	DO av = 0, 1
[1]	560
[108]	561	IF ( av == 0 .AND. .NOT. netcdf_0 ) CYCLE
	562	IF ( av == 1 .AND. .NOT. netcdf_1 ) CYCLE
[1]	563
	564	!
[108]	565	!-- Open NetCDF dataset
	566	IF ( av == 0 ) THEN
	567	filename = 'DATA_3D_NETCDF'//TRIM( model_string )
	568	ELSE
	569	filename = 'DATA_3D_AV_NETCDF'//TRIM( model_string )
	570	ENDIF
	571	nc_stat = NF90_OPEN( filename, NF90_WRITE, id_set(av) )
	572	IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 13 )
[1]	573
	574
	575	!
[108]	576	!-- Get the list of variables (order of variables corresponds with the
	577	!-- order of data on the binary file)
	578	var_list(av) = ' ' ! GET_ATT does not assign trailing blanks
	579	nc_stat = NF90_GET_ATT( id_set(av), NF90_GLOBAL, 'VAR_LIST', &
	580	var_list(av) )
	581	IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 14 )
[1]	582
	583	!
[108]	584	!-- Inquire id of the time coordinate variable
	585	nc_stat = NF90_INQ_VARID( id_set(av), 'time', id_var_time(av) )
	586	IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 15 )
[1]	587
	588	!
[108]	589	!-- Count number of variables; there is one more semicolon in the
	590	!-- string than variable names
	591	num_var(av) = -1
	592	DO i = 1, LEN( var_list(av) )
	593	IF ( var_list(av)(i:i) == ';' ) num_var(av) = num_var(av) + 1
	594	ENDDO
[1]	595
	596	!
[108]	597	!-- Extract the variable names from the list and inquire their NetCDF
	598	!-- IDs
	599	pos = INDEX( var_list(av), ';' )
[1]	600	!
[108]	601	!-- Loop over all variables
	602	DO i = 1, num_var(av)
[1]	603
	604	!
[108]	605	!-- Extract variable name from list
	606	var_list(av) = var_list(av)(pos+1:)
	607	pos = INDEX( var_list(av), ';' )
	608	var_name = var_list(av)(1:pos-1)
[1]	609
	610	!
[108]	611	!-- Get variable ID from name
	612	nc_stat = NF90_INQ_VARID( id_set(av), TRIM( var_name ), &
	613	id_var(av,i) )
	614	IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 16 )
[1]	615
[108]	616	ENDDO
[1]	617
[108]	618	ENDDO ! av=0,1
[1]	619
[179]	620	#endif
[108]	621	ENDIF
[1]	622
	623	!
[108]	624	!-- Read arrays, until the end of the file is reached
	625	current_var = 999999999
	626	fanz = 0
	627	DO WHILE ( danz /= 0 )
[1]	628
	629	!
[108]	630	!-- Loop over all files
	631	DO id = 0, danz-1
[1]	632	!
[108]	633	!-- File from PE0 contains special information at the beginning,
	634	!-- concerning the lower and upper indices of the total-domain used in
	635	!-- PALM (nxag, nxeg, nyag, nyeg, nzag, nzeg) and the lower and upper
	636	!-- indices of the array to be written by this routine (nxa, nxe, nya,
	637	!-- nye, nza, nze). Usually nxag=-1 and nxa=0, nyag=-1 and nya=0,
	638	!-- nzeg=nz and nze=nz_plot3d.
	639	!-- Allocate necessary array and open the output file.
	640	IF ( id == 0 .AND. fanz(0) == 0 .AND. fanz(1) == 0 ) THEN
	641	READ ( id+110 ) nxag, nxeg, nyag, nyeg, nzag, nzeg
	642	READ ( id+110 ) nxa, nxe, nya, nye, nza, nze
[210]	643	ALLOCATE ( pf3d(nxa:nxe,nya:nye,nza:nze) )
[108]	644	IF ( avs_output ) THEN
	645	OPEN ( 2, FILE='PLOT3D_DATA'//TRIM( model_string ), &
	646	FORM='UNFORMATTED' )
	647	ENDIF
[1]	648	ENDIF
	649
	650	!
[108]	651	!-- Read output time
	652	IF ( netcdf_output .AND. id == 0 ) THEN
	653	IF ( netcdf_1 ) THEN
	654	READ ( id+110, END=999 ) simulated_time, time_step, av
	655	ELSE
[1]	656	!
[108]	657	!-- For compatibility with earlier PALM versions
	658	READ ( id+110, END=999 ) simulated_time, time_step
	659	av = 0
	660	ENDIF
[1]	661	ENDIF
	662
	663	!
[108]	664	!-- Read subdomain indices and grid point values
	665	READ ( id+110, END=999 ) xa, xe, ya, ye, za, ze
[191]	666	ALLOCATE( pf3d_tmp(xa:xe,ya:ye,za:ze) )
	667	READ ( id+110 ) pf3d_tmp
[210]	668
	669	xxa = MAX( nxa, xa )
	670	xxe = MIN( nxe, xe )
	671	yya = MAX( nya, ya )
	672	yye = MIN( nye, ye )
	673	zza = MAX( nza, za )
	674	zze = MIN( nze, ze )
	675	DO k = zza, zze
	676	DO j = yya, yye
	677	DO i = xxa, xxe
	678	pf3d(i,j,k) = pf3d_tmp(i,j,k)
	679	ENDDO
	680	ENDDO
	681	ENDDO
	682
[191]	683	DEALLOCATE( pf3d_tmp )
[108]	684	IF ( id == 0 ) fanz(av) = fanz(av) + 1
[1]	685
[108]	686	ENDDO
[1]	687
	688	!
[108]	689	!-- Write data of the total domain
	690	IF ( avs_output ) WRITE ( 2 ) pf3d(nxa:nxe,nya:nye,nza:nze)
[1]	691
	692	!
[108]	693	!-- Write same data in NetCDF format
	694	IF ( netcdf_output ) THEN
[1]	695	#if defined( __netcdf )
	696	!
[108]	697	!-- Check if a new time step has begun; if yes write data to time axis
	698	IF ( current_var(av) > num_var(av) ) THEN
	699	current_var(av) = 1
	700	nc_stat = NF90_PUT_VAR( id_set(av), id_var_time(av), &
[1]	701	(/ simulated_time /),&
	702	start = (/ time_step /), count = (/ 1 /) )
[108]	703	IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 17 )
	704	ENDIF
[1]	705
	706	!
[108]	707	!-- Now write the data
	708	nc_stat = NF90_PUT_VAR( id_set(av), id_var(av,current_var(av)), &
[210]	709	pf3d, start = (/ 1, 1, 1, time_step /), &
[1]	710	count = (/ nxe-nxa+1, nye-nya+1, nze-nza+1, 1 /) )
[108]	711	IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 18 )
[1]	712
[108]	713	current_var(av) = current_var(av) + 1
[1]	714
	715	#endif
[108]	716	ENDIF
[1]	717
[108]	718	ENDDO
[1]	719
[108]	720	999 IF ( danz /= 0 ) THEN
[1]	721	!
[108]	722	!-- Print the number of arrays processed
	723	WRITE (*,'(16X,I4,A)') fanz(0)+fanz(1), ' array(s) processed'
	724	IF ( fanz(1) /= 0 ) THEN
	725	WRITE (*,'(16X,I4,A)') fanz(1), ' array(s) are time-averaged'
	726	ENDIF
[1]	727	!
[108]	728	!-- Close all files and deallocate array
	729	DO id = 0, danz-1
	730	CLOSE ( id+110 )
	731	ENDDO
	732	CLOSE ( 2 )
	733	DEALLOCATE ( pf3d )
[1]	734	!
[108]	735	!-- Close the NetCDF file
	736	IF ( netcdf_output ) THEN
[1]	737	#if defined( __netcdf )
[108]	738	IF ( netcdf_0 ) THEN
	739	nc_stat = NF90_CLOSE( id_set(0) )
	740	IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 19 )
	741	ENDIF
	742	IF ( netcdf_1 ) THEN
	743	nc_stat = NF90_CLOSE( id_set(1) )
	744	IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 20 )
	745	ENDIF
	746	#endif
[1]	747	ENDIF
	748	ENDIF
	749
[108]	750	ENDDO ! models
[1]	751
[108]	752
[1]	753	CONTAINS
	754
	755
	756	SUBROUTINE handle_netcdf_error( errno )
	757	!
	758	!-- Prints out a text message corresponding to the current NetCDF status
	759
	760	IMPLICIT NONE
	761
	762	INTEGER, INTENT(IN) :: errno
	763
[179]	764	#if defined( __netcdf )
[1]	765	IF ( nc_stat /= NF90_NOERR ) THEN
	766	PRINT*, '+++ combine_plot_fields netcdf: ', av, errno, &
	767	TRIM( nf90_strerror( nc_stat ) )
	768	ENDIF
[179]	769	#endif
[1]	770
	771	END SUBROUTINE handle_netcdf_error
	772
	773
	774	END PROGRAM combine_plot_fields
	775
	776
	777

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