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source: palm/trunk/UTIL/combine_plot_fields.f90 @ 214

Last change on this file since 214 was 210, checked in by raasch, 16 years ago
updates in dvr routines for new dvr version
Property svn:keywords set to `Id`
File size: 26.6 KB

Rev	Line
[1]	1	PROGRAM combine_plot_fields
	2
	3	!------------------------------------------------------------------------------!
	4	! Actual revisions:
	5	! -----------------
[210]	6	! Size of pf3d adjusted to the required output size (1 gridpoint less, along
	7	! all three dimensions), because output of a subset of the data
	8	! (pf3d(nxa:nxe...) in the NF90_PUT_VAR statement caused segmentation fault
	9	! with the INTEL compiler.
[191]	10	! Subdomain data are read into temporary arrays pf_tmp/pf3d_tmp in order to
	11	! avoid INTEL compiler warnings about (automatic) creation of temporary arrays
[179]	12	! Bugfix: three misplaced #endif directives
[1]	13	!
	14	! Former revisions:
	15	! -----------------
[114]	16	! $Id: combine_plot_fields.f90 210 2008-11-06 08:54:02Z raasch $
	17	!
[139]	18	! 114 2007-10-10 00:03:15Z raasch
	19	! Bugfix: model_string needed a default value
	20	!
[114]	21	! Aug 07 Loop for processing of output by coupled runs, id_string does not
	22	! contain modus any longer
	23	!
[1]	24	! 18/01/06 Output of time-averaged data
	25	!
	26	! 25/05/05 Errors removed
	27	!
	28	! 26/04/05 Output in NetCDF format, iso2d and avs output only if parameter
	29	! file exists
	30	!
	31	! 31/10/01 All comments and messages translated into English
	32	!
	33	! 23/02/99 Keine Bearbeitung komprimierter 3D-Daten
	34	! Ursprungsversion vom 28/07/97
	35	!
	36	!
	37	! Description:
	38	! ------------
	39	! This routine combines data of the PALM-subdomains into one file. In PALM
	40	! every processor element opens its own file and writes 2D- or 3D-binary-data
	41	! into it (different files are opened for xy-, xz-, yz-cross-sections and
	42	! 3D-data). For plotting or analyzing these PE-data have to be collected and
	43	! to be put into single files, which is done by this routine.
	44	! Output format is NetCDF. Additionally, a data are output in a binary format
	45	! readable by ISO2D-software (cross-sections) and by AVS (3D-data).
	46	!
	47	! This routine must be compiled with:
	48	! decalpha:
	49	! f95 -cpp -D__netcdf -fast -r8 -I/usr/local/netcdf-3.5.1/include
	50	! -L/usr/local/netcdf-3.5.1/lib -lnetcdf
	51	! IBM-Regatta:
	52	! xlf95 -qsuffix=cpp=f90 -WF,-D__netcdf -qrealsize=8 -q64 -qmaxmem=-1 -Q
	53	! -I /aws/dataformats/netcdf-3.6.0-p1/64-32/include-64
	54	! -L/aws/dataformats/netcdf-3.6.0-p1/64-32/lib -lnetcdf -O3
	55	! IBM-Regatta KISTI:
	56	! xlf95 -qsuffix=cpp=f90 -WF,-D__netcdf -qrealsize=8 -q64 -qmaxmem=-1 -Q
	57	! -I /applic/netcdf64/src/f90
	58	! -L/applic/lib/NETCDF64 -lnetcdf -O3
	59	! IBM-Regatta Yonsei (gfdl5):
	60	! xlf95 -qsuffix=cpp=f90 -WF,-D__netcdf -qrealsize=8 -q64 -qmaxmem=-1 -Q
	61	! -I /usr1/users/raasch/pub/netcdf-3.6.0-p1/include
	62	! -L/usr1/users/raasch/pub/netcdf-3.6.0-p1/lib -lnetcdf -O3
	63	! IMUK:
	64	! ifort combine...f90 -o combine...x
	65	! -cpp -D__netcdf -I /muksoft/packages/netcdf/linux/include -axW -r8 -nbs
	66	! -Vaxlib -L /muksoft/packages/netcdf/linux/lib -lnetcdf
	67	! NEC-SX6:
	68	! sxf90 combine...f90 -o combine...x
	69	! -I /pool/SX-6/netcdf/netcdf-3.6.0-p1/include -C hopt -Wf '-A idbl4'
	70	! -D__netcdf -L/pool/SX-6/netcdf/netcdf-3.6.0-p1/lib -lnetcdf
	71	! Sun Fire X4600
	72	! pgf95 combine...f90 -o combine...x
	73	! -Mpreprocess -D__netcdf -I /home/usr5/mkanda/netcdf-3.6.1/src/f90 -r8
	74	! -fast -L/home/usr5/mkanda/netcdf-3.6.1/src/libsrc -lnetcdf
[108]	75	! FIMM:
	76	! ifort combine...f90 -o combine...x
	77	! -axW -cpp -openmp -r8 -nbs -convert little_endian -D__netcdf
	78	! -I /local/netcdf/include -Vaxlib -L/local/netcdf/lib -lnetcdf
[1]	79	!------------------------------------------------------------------------------!
	80
	81	#if defined( __netcdf )
	82	USE netcdf
	83	#endif
	84
	85	IMPLICIT NONE
	86
	87	!
	88	!-- Local variables
[108]	89	CHARACTER (LEN=2) :: modus, model_string
	90	CHARACTER (LEN=4) :: id_string
[1]	91	CHARACTER (LEN=10) :: dimname, var_name
	92	CHARACTER (LEN=40) :: filename
	93
	94	CHARACTER (LEN=2000), DIMENSION(0:1) :: var_list
	95
	96	INTEGER, PARAMETER :: spk = SELECTED_REAL_KIND( 6 )
	97
	98	INTEGER :: av, danz, i, id, &
[210]	99	j, k, model, models, nc_stat, nxa, nxag, nxe, nxeg, nya, &
[1]	100	nyag, nye, nyeg, nza, nzag, nze, nzeg, pos, time_step, xa, xe, &
[210]	101	xxa, xxe, ya, ye, yya, yye, za, ze, zza, zze
[1]	102
[108]	103	INTEGER, DIMENSION(0:1) :: current_level, current_var, fanz, id_set, &
	104	id_var_time, num_var
[1]	105
	106	INTEGER, DIMENSION(4) :: id_dims_loc
	107
	108	INTEGER, DIMENSION(0:1,4) :: id_dims
	109
	110	INTEGER, DIMENSION(0:1,1000) :: id_var, levels
	111
	112	LOGICAL :: avs_output, compressed, found, iso2d_output, netcdf_output, &
	113	netcdf_0, netcdf_1
	114
	115	REAL :: dx, simulated_time
	116	REAL, DIMENSION(:), ALLOCATABLE :: eta, ho, hu
[191]	117	REAL, DIMENSION(:,:), ALLOCATABLE :: pf, pf_tmp
	118	REAL(spk), DIMENSION(:,:,:), ALLOCATABLE :: pf3d, pf3d_tmp
[1]	119
	120	PRINT*, ''
[114]	121	PRINT*, ''
[108]	122	PRINT, ' combine_plot_fields *'
[114]	123
	124	!
	125	!-- Find out if a coupled run has been carried out
[108]	126	INQUIRE( FILE='COUPLING_PORT_OPENED', EXIST=found )
	127	IF ( found ) THEN
	128	models = 2
	129	PRINT*, ' coupled run'
	130	ELSE
	131	models = 1
	132	PRINT*, ' uncoupled run'
	133	ENDIF
[114]	134
	135	!
	136	!-- Do everything for each model
[108]	137	DO model = 1, models
[114]	138	!
	139	!-- Set the model string used to identify the filenames
	140	model_string = ''
[108]	141	IF ( models == 2 ) THEN
	142	PRINT*, ''
	143	PRINT, ' combine_plot_fields *'
	144	IF ( model == 2 ) THEN
[114]	145	model_string = '_O'
[108]	146	PRINT*, ' now combining ocean data'
	147	PRINT*, ' ========================'
	148	ELSE
	149	PRINT*, ' now combining atmosphere data'
	150	PRINT*, ' ============================='
	151	ENDIF
	152	ENDIF
[1]	153	!
[108]	154	!-- 2D-arrays for ISO2D
	155	!-- Main loop for the three different cross-sections, starting with
	156	!-- xy-section
	157	modus = 'XY'
	158	PRINT*, ''
	159	DO WHILE ( modus == 'XY' .OR. modus == 'XZ' .OR. modus == 'YZ' )
[1]	160	!
[108]	161	!-- Check, if file from PE0 exists. If it does not exist, PALM did not
	162	!-- create any output for this cross-section.
	163	danz = 0
	164	WRITE (id_string,'(I4.4)') danz
	165	INQUIRE ( &
	166	FILE='PLOT2D_'//modus//TRIM( model_string )//'_'//id_string, &
	167	EXIST=found )
	168	!
	169	!-- Find out the number of files (equal to the number of PEs which
	170	!-- have been used in PALM) and open them
	171	DO WHILE ( found )
[1]	172
[108]	173	OPEN ( danz+110, &
	174	FILE='PLOT2D_'//modus//TRIM( model_string )//'_'//id_string, &
	175	FORM='UNFORMATTED' )
	176	danz = danz + 1
	177	WRITE (id_string,'(I4.4)') danz
	178	INQUIRE ( &
	179	FILE='PLOT2D_'//modus//TRIM( model_string )//'_'//id_string, &
	180	EXIST=found )
[1]	181
[108]	182	ENDDO
[1]	183
	184	!
[108]	185	!-- Inquire whether an iso2d parameter file exists
	186	INQUIRE( FILE='PLOT2D_'//modus//'_GLOBAL'//TRIM( model_string ), &
	187	EXIST=iso2d_output )
[1]	188
	189	!
[108]	190	!-- Inquire whether a NetCDF file exists
	191	INQUIRE( FILE='DATA_2D_'//modus//'_NETCDF'//TRIM( model_string ), &
	192	EXIST=netcdf_0 )
[1]	193
	194	!
[108]	195	!-- Inquire whether a NetCDF file for time-averaged data exists
	196	INQUIRE( FILE='DATA_2D_'//modus//'_AV_NETCDF'//TRIM( model_string ),&
	197	EXIST=netcdf_1 )
[1]	198
[108]	199	IF ( netcdf_0 .OR. netcdf_1 ) THEN
	200	netcdf_output = .TRUE.
	201	ELSE
	202	netcdf_output = .FALSE.
	203	ENDIF
[1]	204
	205	!
[108]	206	!-- Info-output
	207	PRINT*, ''
	208	PRINT, ' combine_plot_fields *'
[1]	209	#if defined( __netcdf )
[108]	210	IF ( netcdf_output ) PRINT*, ' NetCDF output enabled'
[1]	211	#else
[108]	212	IF ( netcdf_output ) THEN
	213	PRINT*, '--- Sorry, no NetCDF support on this host'
	214	netcdf_output = .FALSE.
	215	ENDIF
[1]	216	#endif
[108]	217	IF ( danz /= 0 ) THEN
	218	PRINT*, ' ',modus,'-section: ', danz, ' file(s) found'
	219	ELSE
	220	PRINT*, ' no ', modus, '-section data available'
	221	ENDIF
[1]	222
[108]	223	IF ( netcdf_output .AND. danz /= 0 ) THEN
[1]	224	#if defined( __netcdf )
[108]	225	DO av = 0, 1
[1]	226
[108]	227	IF ( av == 0 .AND. .NOT. netcdf_0 ) CYCLE
	228	IF ( av == 1 .AND. .NOT. netcdf_1 ) CYCLE
[1]	229
	230	!
[108]	231	!-- Open NetCDF dataset
	232	IF ( av == 0 ) THEN
	233	filename = 'DATA_2D_'//modus//'_NETCDF' &
	234	//TRIM( model_string )
	235	ELSE
	236	filename = 'DATA_2D_'//modus//'_AV_NETCDF' &
	237	//TRIM( model_string )
	238	ENDIF
	239	nc_stat = NF90_OPEN( filename, NF90_WRITE, id_set(av) )
	240	IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 1 )
[1]	241
	242	!
[108]	243	!-- Get the list of variables (order of variables corresponds with
	244	!-- the order of data on the binary file)
	245	var_list(av) = ' ' ! GET_ATT does not assign trailing blanks
	246	nc_stat = NF90_GET_ATT( id_set(av), NF90_GLOBAL, 'VAR_LIST', &
	247	var_list(av) )
	248	IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 2 )
[1]	249
	250	!
[108]	251	!-- Inquire id of the time coordinate variable
	252	nc_stat = NF90_INQ_VARID( id_set(av), 'time', id_var_time(av) )
	253	IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 3 )
[1]	254
	255	!
[108]	256	!-- Count number of variables; there is one more semicolon in the
	257	!-- string than variable names
	258	num_var(av) = -1
	259	DO i = 1, LEN( var_list(av) )
	260	IF ( var_list(av)(i:i) == ';' ) num_var(av) = num_var(av) +1
	261	ENDDO
[1]	262
	263	!
[108]	264	!-- Extract the variable names from the list and inquire their
	265	!-- NetCDF IDs
	266	pos = INDEX( var_list(av), ';' )
[1]	267	!
[108]	268	!-- Loop over all variables
	269	DO i = 1, num_var(av)
[1]	270
	271	!
[108]	272	!-- Extract variable name from list
	273	var_list(av) = var_list(av)(pos+1:)
	274	pos = INDEX( var_list(av), ';' )
	275	var_name = var_list(av)(1:pos-1)
[1]	276
	277	!
[108]	278	!-- Get variable ID from name
	279	nc_stat = NF90_INQ_VARID( id_set(av), TRIM( var_name ), &
	280	id_var(av,i) )
	281	IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 4 )
[1]	282
	283	!
[108]	284	!-- Get number of x/y/z levels for that variable
	285	nc_stat = NF90_INQUIRE_VARIABLE( id_set(av), id_var(av,i), &
	286	dimids = id_dims_loc )
	287	IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 5 )
	288	id_dims(av,:) = id_dims_loc
[1]	289
	290	!
[108]	291	!-- Inquire dimension ID
	292	DO j = 1, 4
	293	nc_stat = NF90_INQUIRE_DIMENSION( id_set(av), &
	294	id_dims(av,j), dimname, levels(av,i) )
	295	IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 6 )
[1]	296
[108]	297	IF ( modus == 'XY' .AND. INDEX(dimname, 'z') /= 0 ) EXIT
	298	IF ( modus == 'XZ' .AND. INDEX(dimname, 'y') /= 0 ) EXIT
	299	IF ( modus == 'YZ' .AND. INDEX(dimname, 'x') /= 0 ) EXIT
	300	ENDDO
	301
[1]	302	ENDDO
	303
[108]	304	ENDDO ! av = 0, 1
[1]	305
[179]	306	#endif
[108]	307	ENDIF
[1]	308
	309	!
[108]	310	!-- Read the arrays, as long as the end of the file is reached
	311	fanz = 0
	312	current_level = 1
	313	current_var = 999999999
[1]	314
[108]	315	DO WHILE ( danz /= 0 )
[1]	316
	317	!
[108]	318	!-- Loop over all files (reading data of the subdomains)
	319	DO id = 0, danz-1
[1]	320	!
[108]	321	!-- File from PE0 contains special information at the beginning,
	322	!-- concerning the lower and upper indices of the total-domain used
	323	!-- in PALM (nxag, nxeg, nyag, nyeg) and the lower and upper indices
	324	!-- of the array to be writte by this routine (nxa, nxe, nya,
	325	!-- nye). Usually in the horizontal directions nxag=-1 and nxa=0
	326	!-- while all other variables have the same value (i.e. nxeg=nxe).
	327	!-- Allocate necessary arrays, open the output file and write
	328	!-- the coordinate informations needed by ISO2D.
	329	IF ( id == 0 .AND. fanz(0) == 0 .AND. fanz(1) == 0 ) THEN
	330	READ ( id+110 ) nxag, nxeg, nyag, nyeg
	331	READ ( id+110 ) nxa, nxe, nya, nye
	332	ALLOCATE ( eta(nya:nye), ho(nxa:nxe), hu(nxa:nxe), &
	333	pf(nxag:nxeg,nyag:nyeg) )
	334	READ ( id+110 ) dx, eta, hu, ho
[1]	335
[108]	336	IF ( iso2d_output ) THEN
	337	OPEN ( 2, FILE='PLOT2D_'//modus//TRIM( model_string ), &
	338	FORM='UNFORMATTED' )
	339	WRITE ( 2 ) dx, eta, hu, ho
	340	ENDIF
[1]	341	ENDIF
	342	!
[108]	343	!-- Read output time
	344	IF ( netcdf_output .AND. id == 0 ) THEN
	345	IF ( netcdf_1 ) THEN
	346	READ ( id+110, END=998 ) simulated_time, time_step, av
	347	ELSE
[1]	348	!
[108]	349	!-- For compatibility with earlier PALM versions
	350	READ ( id+110, END=998 ) simulated_time, time_step
	351	av = 0
	352	ENDIF
[1]	353	ENDIF
	354	!
[108]	355	!-- Read subdomain indices
	356	READ ( id+110, END=998 ) xa, xe, ya, ye
[1]	357	!
[108]	358	!-- IF the PE made no output (in case that no part of the
	359	!-- cross-section is situated on this PE), indices have the
	360	!-- value -1
	361	IF ( .NOT. ( xa == -1 .AND. xe == -1 .AND. &
	362	ya == -1 .AND. ye == -1 ) ) THEN
[1]	363	!
[108]	364	!-- Read the subdomain grid-point values
[191]	365	ALLOCATE( pf_tmp(xa:xe,ya:ye) )
	366	READ ( id+110 ) pf_tmp
	367	pf(xa:xe,ya:ye) = pf_tmp
	368	DEALLOCATE( pf_tmp )
[108]	369	ENDIF
	370	IF ( id == 0 ) fanz(av) = fanz(av) + 1
[1]	371
[108]	372	ENDDO
[1]	373	!
[108]	374	!-- Write the data of the total domain cross-section
	375	IF ( iso2d_output ) WRITE ( 2 ) pf(nxa:nxe,nya:nye)
[1]	376
	377	!
[108]	378	!-- Write same data in NetCDF format
	379	IF ( netcdf_output ) THEN
[1]	380	#if defined( __netcdf )
	381	!
[108]	382	!-- Check if a new time step has begun; if yes write data to time
	383	!-- axis
	384	IF ( current_var(av) > num_var(av) ) THEN
	385	current_var(av) = 1
	386	nc_stat = NF90_PUT_VAR( id_set(av), id_var_time(av), &
	387	(/ simulated_time /), &
	388	start = (/ time_step /), &
	389	count = (/ 1 /) )
	390	IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 7 )
	391	ENDIF
[1]	392
	393	!
[108]	394	!-- Now write the data; this is mode dependent
	395	SELECT CASE ( modus )
[1]	396
[108]	397	CASE ( 'XY' )
	398	nc_stat = NF90_PUT_VAR( id_set(av), &
[1]	399	id_var(av,current_var(av)), &
	400	pf(nxa:nxe,nya:nye), &
	401	start = (/ 1, 1, current_level(av), time_step /), &
	402	count = (/ nxe-nxa+1, nye-nya+1, 1, 1 /) )
[108]	403	IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 8)
[1]	404
[108]	405	CASE ( 'XZ' )
	406	nc_stat = NF90_PUT_VAR( id_set(av), &
[1]	407	id_var(av,current_var(av)), &
	408	pf(nxa:nxe,nya:nye), &
	409	start = (/ 1, current_level(av), 1, time_step /), &
	410	count = (/ nxe-nxa+1, 1, nye-nya+1, 1 /) )
[108]	411	IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 9)
[1]	412
[108]	413	CASE ( 'YZ' )
	414	nc_stat = NF90_PUT_VAR( id_set(av), &
[1]	415	id_var(av,current_var(av)), &
	416	pf(nxa:nxe,nya:nye), &
	417	start = (/ current_level(av), 1, 1, time_step /), &
	418	count = (/ 1, nxe-nxa+1, nye-nya+1, 1 /) )
[108]	419	IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error(10)
[1]	420
[108]	421	END SELECT
[1]	422
	423	!
[108]	424	!-- Data is written, check if max level is reached
	425	current_level(av) = current_level(av) + 1
	426	IF ( current_level(av) > levels(av,current_var(av)) ) THEN
	427	current_level(av) = 1
	428	current_var(av) = current_var(av) + 1
	429	ENDIF
	430
[179]	431	#endif
[1]	432	ENDIF
	433
[108]	434	ENDDO
[1]	435
[108]	436	998 IF ( danz /= 0 ) THEN
[1]	437	!
[108]	438	!-- Print the number of the arrays processed
	439	WRITE (*,'(16X,I4,A)') fanz(0)+fanz(1), ' array(s) processed'
	440	IF ( fanz(1) /= 0 ) THEN
	441	WRITE (*,'(16X,I4,A)') fanz(1), ' array(s) are time-averaged'
	442	ENDIF
[1]	443
	444	!
[108]	445	!-- Close all files and deallocate arrays
	446	DO id = 0, danz-1
	447	CLOSE ( id+110 )
	448	ENDDO
	449	CLOSE ( 2 )
	450	DEALLOCATE ( eta, ho, hu, pf )
	451	ENDIF
[1]	452
	453	!
[108]	454	!-- Close the NetCDF file
	455	IF ( netcdf_output .AND. danz /= 0 ) THEN
[1]	456	#if defined( __netcdf )
[108]	457	IF ( netcdf_0 ) THEN
	458	nc_stat = NF90_CLOSE( id_set(0) )
	459	IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 11 )
	460	ENDIF
	461	IF ( netcdf_1 ) THEN
	462	nc_stat = NF90_CLOSE( id_set(1) )
	463	IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 12 )
	464	ENDIF
	465	#endif
[1]	466	ENDIF
	467
	468	!
[108]	469	!-- Choose the next cross-section
	470	SELECT CASE ( modus )
	471	CASE ( 'XY' )
	472	modus = 'XZ'
	473	CASE ( 'XZ' )
	474	modus = 'YZ'
	475	CASE ( 'YZ' )
	476	modus = 'no'
	477	END SELECT
[1]	478
[108]	479	ENDDO
[1]	480
	481
	482	!
[108]	483	!-- Combine the 3D-arrays
[1]	484
	485	!
[108]	486	!-- Inquire whether an avs fld file exists
	487	INQUIRE( FILE='PLOT3D_FLD'//TRIM( model_string ), EXIST=avs_output )
[1]	488
	489	!
[108]	490	!-- Inquire whether a NetCDF file exists
	491	INQUIRE( FILE='DATA_3D_NETCDF'//TRIM( model_string ), EXIST=netcdf_0 )
[1]	492
	493	!
[108]	494	!-- Inquire whether a NetCDF file for time-averaged data exists
	495	INQUIRE( FILE='DATA_3D_AV_NETCDF'//TRIM( model_string ), EXIST=netcdf_1 )
[1]	496
[108]	497	IF ( netcdf_0 .OR. netcdf_1 ) THEN
	498	netcdf_output = .TRUE.
	499	ELSE
	500	netcdf_output = .FALSE.
	501	ENDIF
[1]	502
	503	!
[108]	504	!-- Check, if file from PE0 exists
	505	danz = 0
	506	WRITE (id_string,'(I4.4)') danz
	507	INQUIRE ( &
	508	FILE='PLOT3D_DATA'//TRIM( model_string )//'_'//TRIM( id_string ), &
	509	EXIST=found )
[1]	510
	511	!
[108]	512	!-- Combination only works, if data are not compressed. In that case,
	513	!-- PALM created a flag file (PLOT3D_COMPRESSED)
	514	INQUIRE ( FILE='PLOT3D_COMPRESSED'//TRIM( model_string ), &
	515	EXIST=compressed )
[1]	516
	517	!
[108]	518	!-- Find out the number of files and open them
	519	DO WHILE ( found .AND. .NOT. compressed )
[1]	520
[108]	521	OPEN ( danz+110, &
	522	FILE='PLOT3D_DATA'//TRIM( model_string )//'_'//TRIM(id_string), &
	523	FORM='UNFORMATTED')
	524	danz = danz + 1
	525	WRITE (id_string,'(I4.4)') danz
	526	INQUIRE ( &
	527	FILE='PLOT3D_DATA'//TRIM( model_string )//'_'//TRIM(id_string), &
	528	EXIST=found )
[1]	529
[108]	530	ENDDO
[1]	531
	532	!
[108]	533	!-- Info-output
	534	PRINT*, ' '
	535	PRINT, ' combine_plot_fields *'
[1]	536	#if defined( __netcdf )
	537	IF ( netcdf_output ) PRINT*, ' NetCDF output enabled'
	538	#else
	539	IF ( netcdf_output ) THEN
	540	PRINT*, '--- Sorry, no NetCDF support on this host'
	541	netcdf_output = .FALSE.
	542	ENDIF
	543	#endif
[108]	544	IF ( danz /= 0 ) THEN
	545	PRINT*, ' 3D-data: ', danz, ' file(s) found'
[1]	546	ELSE
[108]	547	IF ( found .AND. compressed ) THEN
	548	PRINT*, '+++ no 3D-data processing, since data are compressed'
	549	ELSE
	550	PRINT*, ' no 3D-data file available'
	551	ENDIF
[1]	552	ENDIF
	553
[108]	554	IF ( netcdf_output .AND. danz /= 0 ) THEN
[1]	555	#if defined( __netcdf )
[108]	556	DO av = 0, 1
[1]	557
[108]	558	IF ( av == 0 .AND. .NOT. netcdf_0 ) CYCLE
	559	IF ( av == 1 .AND. .NOT. netcdf_1 ) CYCLE
[1]	560
	561	!
[108]	562	!-- Open NetCDF dataset
	563	IF ( av == 0 ) THEN
	564	filename = 'DATA_3D_NETCDF'//TRIM( model_string )
	565	ELSE
	566	filename = 'DATA_3D_AV_NETCDF'//TRIM( model_string )
	567	ENDIF
	568	nc_stat = NF90_OPEN( filename, NF90_WRITE, id_set(av) )
	569	IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 13 )
[1]	570
	571
	572	!
[108]	573	!-- Get the list of variables (order of variables corresponds with the
	574	!-- order of data on the binary file)
	575	var_list(av) = ' ' ! GET_ATT does not assign trailing blanks
	576	nc_stat = NF90_GET_ATT( id_set(av), NF90_GLOBAL, 'VAR_LIST', &
	577	var_list(av) )
	578	IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 14 )
[1]	579
	580	!
[108]	581	!-- Inquire id of the time coordinate variable
	582	nc_stat = NF90_INQ_VARID( id_set(av), 'time', id_var_time(av) )
	583	IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 15 )
[1]	584
	585	!
[108]	586	!-- Count number of variables; there is one more semicolon in the
	587	!-- string than variable names
	588	num_var(av) = -1
	589	DO i = 1, LEN( var_list(av) )
	590	IF ( var_list(av)(i:i) == ';' ) num_var(av) = num_var(av) + 1
	591	ENDDO
[1]	592
	593	!
[108]	594	!-- Extract the variable names from the list and inquire their NetCDF
	595	!-- IDs
	596	pos = INDEX( var_list(av), ';' )
[1]	597	!
[108]	598	!-- Loop over all variables
	599	DO i = 1, num_var(av)
[1]	600
	601	!
[108]	602	!-- Extract variable name from list
	603	var_list(av) = var_list(av)(pos+1:)
	604	pos = INDEX( var_list(av), ';' )
	605	var_name = var_list(av)(1:pos-1)
[1]	606
	607	!
[108]	608	!-- Get variable ID from name
	609	nc_stat = NF90_INQ_VARID( id_set(av), TRIM( var_name ), &
	610	id_var(av,i) )
	611	IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 16 )
[1]	612
[108]	613	ENDDO
[1]	614
[108]	615	ENDDO ! av=0,1
[1]	616
[179]	617	#endif
[108]	618	ENDIF
[1]	619
	620	!
[108]	621	!-- Read arrays, until the end of the file is reached
	622	current_var = 999999999
	623	fanz = 0
	624	DO WHILE ( danz /= 0 )
[1]	625
	626	!
[108]	627	!-- Loop over all files
	628	DO id = 0, danz-1
[1]	629	!
[108]	630	!-- File from PE0 contains special information at the beginning,
	631	!-- concerning the lower and upper indices of the total-domain used in
	632	!-- PALM (nxag, nxeg, nyag, nyeg, nzag, nzeg) and the lower and upper
	633	!-- indices of the array to be written by this routine (nxa, nxe, nya,
	634	!-- nye, nza, nze). Usually nxag=-1 and nxa=0, nyag=-1 and nya=0,
	635	!-- nzeg=nz and nze=nz_plot3d.
	636	!-- Allocate necessary array and open the output file.
	637	IF ( id == 0 .AND. fanz(0) == 0 .AND. fanz(1) == 0 ) THEN
	638	READ ( id+110 ) nxag, nxeg, nyag, nyeg, nzag, nzeg
	639	READ ( id+110 ) nxa, nxe, nya, nye, nza, nze
[210]	640	ALLOCATE ( pf3d(nxa:nxe,nya:nye,nza:nze) )
[108]	641	IF ( avs_output ) THEN
	642	OPEN ( 2, FILE='PLOT3D_DATA'//TRIM( model_string ), &
	643	FORM='UNFORMATTED' )
	644	ENDIF
[1]	645	ENDIF
	646
	647	!
[108]	648	!-- Read output time
	649	IF ( netcdf_output .AND. id == 0 ) THEN
	650	IF ( netcdf_1 ) THEN
	651	READ ( id+110, END=999 ) simulated_time, time_step, av
	652	ELSE
[1]	653	!
[108]	654	!-- For compatibility with earlier PALM versions
	655	READ ( id+110, END=999 ) simulated_time, time_step
	656	av = 0
	657	ENDIF
[1]	658	ENDIF
	659
	660	!
[108]	661	!-- Read subdomain indices and grid point values
	662	READ ( id+110, END=999 ) xa, xe, ya, ye, za, ze
[191]	663	ALLOCATE( pf3d_tmp(xa:xe,ya:ye,za:ze) )
	664	READ ( id+110 ) pf3d_tmp
[210]	665
	666	xxa = MAX( nxa, xa )
	667	xxe = MIN( nxe, xe )
	668	yya = MAX( nya, ya )
	669	yye = MIN( nye, ye )
	670	zza = MAX( nza, za )
	671	zze = MIN( nze, ze )
	672	DO k = zza, zze
	673	DO j = yya, yye
	674	DO i = xxa, xxe
	675	pf3d(i,j,k) = pf3d_tmp(i,j,k)
	676	ENDDO
	677	ENDDO
	678	ENDDO
	679
[191]	680	DEALLOCATE( pf3d_tmp )
[108]	681	IF ( id == 0 ) fanz(av) = fanz(av) + 1
[1]	682
[108]	683	ENDDO
[1]	684
	685	!
[108]	686	!-- Write data of the total domain
	687	IF ( avs_output ) WRITE ( 2 ) pf3d(nxa:nxe,nya:nye,nza:nze)
[1]	688
	689	!
[108]	690	!-- Write same data in NetCDF format
	691	IF ( netcdf_output ) THEN
[1]	692	#if defined( __netcdf )
	693	!
[108]	694	!-- Check if a new time step has begun; if yes write data to time axis
	695	IF ( current_var(av) > num_var(av) ) THEN
	696	current_var(av) = 1
	697	nc_stat = NF90_PUT_VAR( id_set(av), id_var_time(av), &
[1]	698	(/ simulated_time /),&
	699	start = (/ time_step /), count = (/ 1 /) )
[108]	700	IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 17 )
	701	ENDIF
[1]	702
	703	!
[108]	704	!-- Now write the data
	705	nc_stat = NF90_PUT_VAR( id_set(av), id_var(av,current_var(av)), &
[210]	706	pf3d, start = (/ 1, 1, 1, time_step /), &
[1]	707	count = (/ nxe-nxa+1, nye-nya+1, nze-nza+1, 1 /) )
[108]	708	IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 18 )
[1]	709
[108]	710	current_var(av) = current_var(av) + 1
[1]	711
	712	#endif
[108]	713	ENDIF
[1]	714
[108]	715	ENDDO
[1]	716
[108]	717	999 IF ( danz /= 0 ) THEN
[1]	718	!
[108]	719	!-- Print the number of arrays processed
	720	WRITE (*,'(16X,I4,A)') fanz(0)+fanz(1), ' array(s) processed'
	721	IF ( fanz(1) /= 0 ) THEN
	722	WRITE (*,'(16X,I4,A)') fanz(1), ' array(s) are time-averaged'
	723	ENDIF
[1]	724	!
[108]	725	!-- Close all files and deallocate array
	726	DO id = 0, danz-1
	727	CLOSE ( id+110 )
	728	ENDDO
	729	CLOSE ( 2 )
	730	DEALLOCATE ( pf3d )
[1]	731	!
[108]	732	!-- Close the NetCDF file
	733	IF ( netcdf_output ) THEN
[1]	734	#if defined( __netcdf )
[108]	735	IF ( netcdf_0 ) THEN
	736	nc_stat = NF90_CLOSE( id_set(0) )
	737	IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 19 )
	738	ENDIF
	739	IF ( netcdf_1 ) THEN
	740	nc_stat = NF90_CLOSE( id_set(1) )
	741	IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 20 )
	742	ENDIF
	743	#endif
[1]	744	ENDIF
	745	ENDIF
	746
[108]	747	ENDDO ! models
[1]	748
[108]	749
[1]	750	CONTAINS
	751
	752
	753	SUBROUTINE handle_netcdf_error( errno )
	754	!
	755	!-- Prints out a text message corresponding to the current NetCDF status
	756
	757	IMPLICIT NONE
	758
	759	INTEGER, INTENT(IN) :: errno
	760
[179]	761	#if defined( __netcdf )
[1]	762	IF ( nc_stat /= NF90_NOERR ) THEN
	763	PRINT*, '+++ combine_plot_fields netcdf: ', av, errno, &
	764	TRIM( nf90_strerror( nc_stat ) )
	765	ENDIF
[179]	766	#endif
[1]	767
	768	END SUBROUTINE handle_netcdf_error
	769
	770
	771	END PROGRAM combine_plot_fields
	772
	773
	774

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