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combine_plot_fields.f90 @ 149

Last change on this file since 149 was 139, checked in by raasch, 17 years ago

New:
---

Plant canopy model of Watanabe (2004,BLM 112,307-341) added.
It can be switched on by the inipar parameter plant_canopy.
The inipar parameter canopy_mode can be used to prescribe a
plant canopy type. The default case is a homogeneous plant
canopy. Heterogeneous distributions of the leaf area
density and the canopy drag coefficient can be defined in the
new routine user_init_plant_canopy (user_interface).
The inipar parameters lad_surface, lad_vertical_gradient and
lad_vertical_gradient_level can be used in order to
prescribe the vertical profile of leaf area density. The
inipar parameter drag_coefficient determines the canopy
drag coefficient.
Finally, the inipar parameter pch_index determines the
index of the upper boundary of the plant canopy.

Allow new case bc_uv_t = 'dirichlet_0' for channel flow.

For unknown variables (CASE DEFAULT) call new subroutine user_data_output_dvrp

Pressure boundary conditions for vertical walls added to the multigrid solver.
They are applied using new wall flag arrays (wall_flags_..) which are defined
for each grid level. New argument gls added to routine user_init_grid
(user_interface).

Frequence of sorting particles can be controlled with new particles_par
parameter dt_sort_particles. Sorting is moved from the SGS timestep loop in
advec_particles after the end of this loop.

advec_particles, check_parameters, data_output_dvrp, header, init_3d_model, init_grid, init_particles, init_pegrid, modules, package_parin, parin, plant_canopy_model, read_var_list, read_3d_binary, user_interface, write_var_list, write_3d_binary

Changed:

Redefine initial nzb_local as the actual total size of topography (later the
extent of topography in nzb_local is reduced by 1dx at the E topography walls
and by 1dy at the N topography walls to form the basis for nzb_s_inner);
for consistency redefine 'single_building' case.

Vertical profiles now based on nzb_s_inner; they are divided by
ngp_2dh_s_inner (scalars, procucts of scalars) and ngp_2dh (staggered velocity
components and their products, procucts of scalars and velocity components),
respectively.

Allow two instead of one digit to specify isosurface and slicer variables.

Status of 3D-volume NetCDF data file only depends on switch netcdf_64bit_3d (check_open)

prognostic_equations include the respective wall_*flux in the parameter list of
calls of diffusion_s. Same as before, only the values of wall_heatflux(0:4)
can be assigned. At present, wall_humidityflux, wall_qflux, wall_salinityflux,
and wall_scalarflux are kept zero. diffusion_s uses the respective wall_*flux
instead of wall_heatflux. This update serves two purposes:

it avoids errors in calculations with humidity/scalar/salinity and prescribed

non-zero wall_heatflux,

it prepares PALM for a possible assignment of wall fluxes of

humidity/scalar/salinity in a future release.

buoyancy, check_open, data_output_dvrp, diffusion_s, diffusivities, flow_statistics, header, init_3d_model, init_dvrp, init_grid, modules, prognostic_equations

Errors:

Bugfix: summation of sums_l_l in diffusivities.

Several bugfixes in the ocean part: Initial density rho is calculated
(init_ocean). Error in initializing u_init and v_init removed
(check_parameters). Calculation of density flux now starts from
nzb+1 (production_e).

Bugfix: pleft/pright changed to pnorth/psouth in sendrecv of particle tail
numbers along y, small bugfixes in the SGS part (advec_particles)

Bugfix: model_string needed a default value (combine_plot_fields)

Bugfix: wavenumber calculation for even nx in routines maketri (poisfft)

Bugfix: assignment of fluxes at walls

Bugfix: absolute value of f must be used when calculating the Blackadar mixing length (init_1d_model)

advec_particles, check_parameters, combine_plot_fields, diffusion_s, diffusivities, init_ocean, init_1d_model, poisfft, production_e

Property svn:keywords set to Id

File size: 25.7 KB

Rev	Line
[1]	1	PROGRAM combine_plot_fields
	2
	3	!------------------------------------------------------------------------------!
	4	! Actual revisions:
	5	! -----------------
[139]	6	!
[1]	7	!
	8	! Former revisions:
	9	! -----------------
[114]	10	! $Id: combine_plot_fields.f90 139 2007-11-29 09:37:41Z letzel $
	11	!
[139]	12	! 114 2007-10-10 00:03:15Z raasch
	13	! Bugfix: model_string needed a default value
	14	!
[114]	15	! Aug 07 Loop for processing of output by coupled runs, id_string does not
	16	! contain modus any longer
	17	!
[1]	18	! 18/01/06 Output of time-averaged data
	19	!
	20	! 25/05/05 Errors removed
	21	!
	22	! 26/04/05 Output in NetCDF format, iso2d and avs output only if parameter
	23	! file exists
	24	!
	25	! 31/10/01 All comments and messages translated into English
	26	!
	27	! 23/02/99 Keine Bearbeitung komprimierter 3D-Daten
	28	! Ursprungsversion vom 28/07/97
	29	!
	30	!
	31	! Description:
	32	! ------------
	33	! This routine combines data of the PALM-subdomains into one file. In PALM
	34	! every processor element opens its own file and writes 2D- or 3D-binary-data
	35	! into it (different files are opened for xy-, xz-, yz-cross-sections and
	36	! 3D-data). For plotting or analyzing these PE-data have to be collected and
	37	! to be put into single files, which is done by this routine.
	38	! Output format is NetCDF. Additionally, a data are output in a binary format
	39	! readable by ISO2D-software (cross-sections) and by AVS (3D-data).
	40	!
	41	! This routine must be compiled with:
	42	! decalpha:
	43	! f95 -cpp -D__netcdf -fast -r8 -I/usr/local/netcdf-3.5.1/include
	44	! -L/usr/local/netcdf-3.5.1/lib -lnetcdf
	45	! IBM-Regatta:
	46	! xlf95 -qsuffix=cpp=f90 -WF,-D__netcdf -qrealsize=8 -q64 -qmaxmem=-1 -Q
	47	! -I /aws/dataformats/netcdf-3.6.0-p1/64-32/include-64
	48	! -L/aws/dataformats/netcdf-3.6.0-p1/64-32/lib -lnetcdf -O3
	49	! IBM-Regatta KISTI:
	50	! xlf95 -qsuffix=cpp=f90 -WF,-D__netcdf -qrealsize=8 -q64 -qmaxmem=-1 -Q
	51	! -I /applic/netcdf64/src/f90
	52	! -L/applic/lib/NETCDF64 -lnetcdf -O3
	53	! IBM-Regatta Yonsei (gfdl5):
	54	! xlf95 -qsuffix=cpp=f90 -WF,-D__netcdf -qrealsize=8 -q64 -qmaxmem=-1 -Q
	55	! -I /usr1/users/raasch/pub/netcdf-3.6.0-p1/include
	56	! -L/usr1/users/raasch/pub/netcdf-3.6.0-p1/lib -lnetcdf -O3
	57	! IMUK:
	58	! ifort combine...f90 -o combine...x
	59	! -cpp -D__netcdf -I /muksoft/packages/netcdf/linux/include -axW -r8 -nbs
	60	! -Vaxlib -L /muksoft/packages/netcdf/linux/lib -lnetcdf
	61	! NEC-SX6:
	62	! sxf90 combine...f90 -o combine...x
	63	! -I /pool/SX-6/netcdf/netcdf-3.6.0-p1/include -C hopt -Wf '-A idbl4'
	64	! -D__netcdf -L/pool/SX-6/netcdf/netcdf-3.6.0-p1/lib -lnetcdf
	65	! Sun Fire X4600
	66	! pgf95 combine...f90 -o combine...x
	67	! -Mpreprocess -D__netcdf -I /home/usr5/mkanda/netcdf-3.6.1/src/f90 -r8
	68	! -fast -L/home/usr5/mkanda/netcdf-3.6.1/src/libsrc -lnetcdf
[108]	69	! FIMM:
	70	! ifort combine...f90 -o combine...x
	71	! -axW -cpp -openmp -r8 -nbs -convert little_endian -D__netcdf
	72	! -I /local/netcdf/include -Vaxlib -L/local/netcdf/lib -lnetcdf
[1]	73	!------------------------------------------------------------------------------!
	74
	75	#if defined( __netcdf )
	76	USE netcdf
	77	#endif
	78
	79	IMPLICIT NONE
	80
	81	!
	82	!-- Local variables
[108]	83	CHARACTER (LEN=2) :: modus, model_string
	84	CHARACTER (LEN=4) :: id_string
[1]	85	CHARACTER (LEN=10) :: dimname, var_name
	86	CHARACTER (LEN=40) :: filename
	87
	88	CHARACTER (LEN=2000), DIMENSION(0:1) :: var_list
	89
	90	INTEGER, PARAMETER :: spk = SELECTED_REAL_KIND( 6 )
	91
	92	INTEGER :: av, danz, i, id, &
[108]	93	j, model, models, nc_stat, nxa, nxag, nxe, nxeg, nya, &
[1]	94	nyag, nye, nyeg, nza, nzag, nze, nzeg, pos, time_step, xa, xe, &
	95	ya, ye, za, ze
	96
[108]	97	INTEGER, DIMENSION(0:1) :: current_level, current_var, fanz, id_set, &
	98	id_var_time, num_var
[1]	99
	100	INTEGER, DIMENSION(4) :: id_dims_loc
	101
	102	INTEGER, DIMENSION(0:1,4) :: id_dims
	103
	104	INTEGER, DIMENSION(0:1,1000) :: id_var, levels
	105
	106	LOGICAL :: avs_output, compressed, found, iso2d_output, netcdf_output, &
	107	netcdf_0, netcdf_1
	108
	109	REAL :: dx, simulated_time
	110	REAL, DIMENSION(:), ALLOCATABLE :: eta, ho, hu
	111	REAL, DIMENSION(:,:), ALLOCATABLE :: pf
	112	REAL(spk), DIMENSION(:,:,:), ALLOCATABLE :: pf3d
	113
	114	PRINT*, ''
[114]	115	PRINT*, ''
[108]	116	PRINT, ' combine_plot_fields *'
[114]	117
	118	!
	119	!-- Find out if a coupled run has been carried out
[108]	120	INQUIRE( FILE='COUPLING_PORT_OPENED', EXIST=found )
	121	IF ( found ) THEN
	122	models = 2
	123	PRINT*, ' coupled run'
	124	ELSE
	125	models = 1
	126	PRINT*, ' uncoupled run'
	127	ENDIF
[114]	128
	129	!
	130	!-- Do everything for each model
[108]	131	DO model = 1, models
[114]	132	!
	133	!-- Set the model string used to identify the filenames
	134	model_string = ''
[108]	135	IF ( models == 2 ) THEN
	136	PRINT*, ''
	137	PRINT, ' combine_plot_fields *'
	138	IF ( model == 2 ) THEN
[114]	139	model_string = '_O'
[108]	140	PRINT*, ' now combining ocean data'
	141	PRINT*, ' ========================'
	142	ELSE
	143	PRINT*, ' now combining atmosphere data'
	144	PRINT*, ' ============================='
	145	ENDIF
	146	ENDIF
[1]	147	!
[108]	148	!-- 2D-arrays for ISO2D
	149	!-- Main loop for the three different cross-sections, starting with
	150	!-- xy-section
	151	modus = 'XY'
	152	PRINT*, ''
	153	DO WHILE ( modus == 'XY' .OR. modus == 'XZ' .OR. modus == 'YZ' )
[1]	154	!
[108]	155	!-- Check, if file from PE0 exists. If it does not exist, PALM did not
	156	!-- create any output for this cross-section.
	157	danz = 0
	158	WRITE (id_string,'(I4.4)') danz
	159	INQUIRE ( &
	160	FILE='PLOT2D_'//modus//TRIM( model_string )//'_'//id_string, &
	161	EXIST=found )
	162	!
	163	!-- Find out the number of files (equal to the number of PEs which
	164	!-- have been used in PALM) and open them
	165	DO WHILE ( found )
[1]	166
[108]	167	OPEN ( danz+110, &
	168	FILE='PLOT2D_'//modus//TRIM( model_string )//'_'//id_string, &
	169	FORM='UNFORMATTED' )
	170	danz = danz + 1
	171	WRITE (id_string,'(I4.4)') danz
	172	INQUIRE ( &
	173	FILE='PLOT2D_'//modus//TRIM( model_string )//'_'//id_string, &
	174	EXIST=found )
[1]	175
[108]	176	ENDDO
[1]	177
	178	!
[108]	179	!-- Inquire whether an iso2d parameter file exists
	180	INQUIRE( FILE='PLOT2D_'//modus//'_GLOBAL'//TRIM( model_string ), &
	181	EXIST=iso2d_output )
[1]	182
	183	!
[108]	184	!-- Inquire whether a NetCDF file exists
	185	INQUIRE( FILE='DATA_2D_'//modus//'_NETCDF'//TRIM( model_string ), &
	186	EXIST=netcdf_0 )
[1]	187
	188	!
[108]	189	!-- Inquire whether a NetCDF file for time-averaged data exists
	190	INQUIRE( FILE='DATA_2D_'//modus//'_AV_NETCDF'//TRIM( model_string ),&
	191	EXIST=netcdf_1 )
[1]	192
[108]	193	IF ( netcdf_0 .OR. netcdf_1 ) THEN
	194	netcdf_output = .TRUE.
	195	ELSE
	196	netcdf_output = .FALSE.
	197	ENDIF
[1]	198
	199	!
[108]	200	!-- Info-output
	201	PRINT*, ''
	202	PRINT, ' combine_plot_fields *'
[1]	203	#if defined( __netcdf )
[108]	204	IF ( netcdf_output ) PRINT*, ' NetCDF output enabled'
[1]	205	#else
[108]	206	IF ( netcdf_output ) THEN
	207	PRINT*, '--- Sorry, no NetCDF support on this host'
	208	netcdf_output = .FALSE.
	209	ENDIF
[1]	210	#endif
[108]	211	IF ( danz /= 0 ) THEN
	212	PRINT*, ' ',modus,'-section: ', danz, ' file(s) found'
	213	ELSE
	214	PRINT*, ' no ', modus, '-section data available'
	215	ENDIF
[1]	216
[108]	217	IF ( netcdf_output .AND. danz /= 0 ) THEN
[1]	218	#if defined( __netcdf )
[108]	219	DO av = 0, 1
[1]	220
[108]	221	IF ( av == 0 .AND. .NOT. netcdf_0 ) CYCLE
	222	IF ( av == 1 .AND. .NOT. netcdf_1 ) CYCLE
[1]	223
	224	!
[108]	225	!-- Open NetCDF dataset
	226	IF ( av == 0 ) THEN
	227	filename = 'DATA_2D_'//modus//'_NETCDF' &
	228	//TRIM( model_string )
	229	ELSE
	230	filename = 'DATA_2D_'//modus//'_AV_NETCDF' &
	231	//TRIM( model_string )
	232	ENDIF
	233	nc_stat = NF90_OPEN( filename, NF90_WRITE, id_set(av) )
	234	IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 1 )
[1]	235
	236	!
[108]	237	!-- Get the list of variables (order of variables corresponds with
	238	!-- the order of data on the binary file)
	239	var_list(av) = ' ' ! GET_ATT does not assign trailing blanks
	240	nc_stat = NF90_GET_ATT( id_set(av), NF90_GLOBAL, 'VAR_LIST', &
	241	var_list(av) )
	242	IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 2 )
[1]	243
	244	!
[108]	245	!-- Inquire id of the time coordinate variable
	246	nc_stat = NF90_INQ_VARID( id_set(av), 'time', id_var_time(av) )
	247	IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 3 )
[1]	248
	249	!
[108]	250	!-- Count number of variables; there is one more semicolon in the
	251	!-- string than variable names
	252	num_var(av) = -1
	253	DO i = 1, LEN( var_list(av) )
	254	IF ( var_list(av)(i:i) == ';' ) num_var(av) = num_var(av) +1
	255	ENDDO
[1]	256
	257	!
[108]	258	!-- Extract the variable names from the list and inquire their
	259	!-- NetCDF IDs
	260	pos = INDEX( var_list(av), ';' )
[1]	261	!
[108]	262	!-- Loop over all variables
	263	DO i = 1, num_var(av)
[1]	264
	265	!
[108]	266	!-- Extract variable name from list
	267	var_list(av) = var_list(av)(pos+1:)
	268	pos = INDEX( var_list(av), ';' )
	269	var_name = var_list(av)(1:pos-1)
[1]	270
	271	!
[108]	272	!-- Get variable ID from name
	273	nc_stat = NF90_INQ_VARID( id_set(av), TRIM( var_name ), &
	274	id_var(av,i) )
	275	IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 4 )
[1]	276
	277	!
[108]	278	!-- Get number of x/y/z levels for that variable
	279	nc_stat = NF90_INQUIRE_VARIABLE( id_set(av), id_var(av,i), &
	280	dimids = id_dims_loc )
	281	IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 5 )
	282	id_dims(av,:) = id_dims_loc
[1]	283
	284	!
[108]	285	!-- Inquire dimension ID
	286	DO j = 1, 4
	287	nc_stat = NF90_INQUIRE_DIMENSION( id_set(av), &
	288	id_dims(av,j), dimname, levels(av,i) )
	289	IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 6 )
[1]	290
[108]	291	IF ( modus == 'XY' .AND. INDEX(dimname, 'z') /= 0 ) EXIT
	292	IF ( modus == 'XZ' .AND. INDEX(dimname, 'y') /= 0 ) EXIT
	293	IF ( modus == 'YZ' .AND. INDEX(dimname, 'x') /= 0 ) EXIT
	294	ENDDO
	295
[1]	296	ENDDO
	297
[108]	298	ENDDO ! av = 0, 1
[1]	299
[108]	300	ENDIF
[1]	301	#endif
	302
	303	!
[108]	304	!-- Read the arrays, as long as the end of the file is reached
	305	fanz = 0
	306	current_level = 1
	307	current_var = 999999999
[1]	308
[108]	309	DO WHILE ( danz /= 0 )
[1]	310
	311	!
[108]	312	!-- Loop over all files (reading data of the subdomains)
	313	DO id = 0, danz-1
[1]	314	!
[108]	315	!-- File from PE0 contains special information at the beginning,
	316	!-- concerning the lower and upper indices of the total-domain used
	317	!-- in PALM (nxag, nxeg, nyag, nyeg) and the lower and upper indices
	318	!-- of the array to be writte by this routine (nxa, nxe, nya,
	319	!-- nye). Usually in the horizontal directions nxag=-1 and nxa=0
	320	!-- while all other variables have the same value (i.e. nxeg=nxe).
	321	!-- Allocate necessary arrays, open the output file and write
	322	!-- the coordinate informations needed by ISO2D.
	323	IF ( id == 0 .AND. fanz(0) == 0 .AND. fanz(1) == 0 ) THEN
	324	READ ( id+110 ) nxag, nxeg, nyag, nyeg
	325	READ ( id+110 ) nxa, nxe, nya, nye
	326	ALLOCATE ( eta(nya:nye), ho(nxa:nxe), hu(nxa:nxe), &
	327	pf(nxag:nxeg,nyag:nyeg) )
	328	READ ( id+110 ) dx, eta, hu, ho
[1]	329
[108]	330	IF ( iso2d_output ) THEN
	331	OPEN ( 2, FILE='PLOT2D_'//modus//TRIM( model_string ), &
	332	FORM='UNFORMATTED' )
	333	WRITE ( 2 ) dx, eta, hu, ho
	334	ENDIF
[1]	335	ENDIF
	336	!
[108]	337	!-- Read output time
	338	IF ( netcdf_output .AND. id == 0 ) THEN
	339	IF ( netcdf_1 ) THEN
	340	READ ( id+110, END=998 ) simulated_time, time_step, av
	341	ELSE
[1]	342	!
[108]	343	!-- For compatibility with earlier PALM versions
	344	READ ( id+110, END=998 ) simulated_time, time_step
	345	av = 0
	346	ENDIF
[1]	347	ENDIF
	348	!
[108]	349	!-- Read subdomain indices
	350	READ ( id+110, END=998 ) xa, xe, ya, ye
[1]	351	!
[108]	352	!-- IF the PE made no output (in case that no part of the
	353	!-- cross-section is situated on this PE), indices have the
	354	!-- value -1
	355	IF ( .NOT. ( xa == -1 .AND. xe == -1 .AND. &
	356	ya == -1 .AND. ye == -1 ) ) THEN
[1]	357	!
[108]	358	!-- Read the subdomain grid-point values
	359	READ ( id+110 ) pf(xa:xe,ya:ye)
	360	ENDIF
	361	IF ( id == 0 ) fanz(av) = fanz(av) + 1
[1]	362
[108]	363	ENDDO
[1]	364	!
[108]	365	!-- Write the data of the total domain cross-section
	366	IF ( iso2d_output ) WRITE ( 2 ) pf(nxa:nxe,nya:nye)
[1]	367
	368	!
[108]	369	!-- Write same data in NetCDF format
	370	IF ( netcdf_output ) THEN
[1]	371	#if defined( __netcdf )
	372	!
[108]	373	!-- Check if a new time step has begun; if yes write data to time
	374	!-- axis
	375	IF ( current_var(av) > num_var(av) ) THEN
	376	current_var(av) = 1
	377	nc_stat = NF90_PUT_VAR( id_set(av), id_var_time(av), &
	378	(/ simulated_time /), &
	379	start = (/ time_step /), &
	380	count = (/ 1 /) )
	381	IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 7 )
	382	ENDIF
[1]	383
	384	!
[108]	385	!-- Now write the data; this is mode dependent
	386	SELECT CASE ( modus )
[1]	387
[108]	388	CASE ( 'XY' )
	389	nc_stat = NF90_PUT_VAR( id_set(av), &
[1]	390	id_var(av,current_var(av)), &
	391	pf(nxa:nxe,nya:nye), &
	392	start = (/ 1, 1, current_level(av), time_step /), &
	393	count = (/ nxe-nxa+1, nye-nya+1, 1, 1 /) )
[108]	394	IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 8)
[1]	395
[108]	396	CASE ( 'XZ' )
	397	nc_stat = NF90_PUT_VAR( id_set(av), &
[1]	398	id_var(av,current_var(av)), &
	399	pf(nxa:nxe,nya:nye), &
	400	start = (/ 1, current_level(av), 1, time_step /), &
	401	count = (/ nxe-nxa+1, 1, nye-nya+1, 1 /) )
[108]	402	IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 9)
[1]	403
[108]	404	CASE ( 'YZ' )
	405	nc_stat = NF90_PUT_VAR( id_set(av), &
[1]	406	id_var(av,current_var(av)), &
	407	pf(nxa:nxe,nya:nye), &
	408	start = (/ current_level(av), 1, 1, time_step /), &
	409	count = (/ 1, nxe-nxa+1, nye-nya+1, 1 /) )
[108]	410	IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error(10)
[1]	411
[108]	412	END SELECT
[1]	413
	414	!
[108]	415	!-- Data is written, check if max level is reached
	416	current_level(av) = current_level(av) + 1
	417	IF ( current_level(av) > levels(av,current_var(av)) ) THEN
	418	current_level(av) = 1
	419	current_var(av) = current_var(av) + 1
	420	ENDIF
	421
[1]	422	ENDIF
	423	#endif
	424
[108]	425	ENDDO
[1]	426
[108]	427	998 IF ( danz /= 0 ) THEN
[1]	428	!
[108]	429	!-- Print the number of the arrays processed
	430	WRITE (*,'(16X,I4,A)') fanz(0)+fanz(1), ' array(s) processed'
	431	IF ( fanz(1) /= 0 ) THEN
	432	WRITE (*,'(16X,I4,A)') fanz(1), ' array(s) are time-averaged'
	433	ENDIF
[1]	434
	435	!
[108]	436	!-- Close all files and deallocate arrays
	437	DO id = 0, danz-1
	438	CLOSE ( id+110 )
	439	ENDDO
	440	CLOSE ( 2 )
	441	DEALLOCATE ( eta, ho, hu, pf )
	442	ENDIF
[1]	443
	444	!
[108]	445	!-- Close the NetCDF file
	446	IF ( netcdf_output .AND. danz /= 0 ) THEN
[1]	447	#if defined( __netcdf )
[108]	448	IF ( netcdf_0 ) THEN
	449	nc_stat = NF90_CLOSE( id_set(0) )
	450	IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 11 )
	451	ENDIF
	452	IF ( netcdf_1 ) THEN
	453	nc_stat = NF90_CLOSE( id_set(1) )
	454	IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 12 )
	455	ENDIF
	456	#endif
[1]	457	ENDIF
	458
	459	!
[108]	460	!-- Choose the next cross-section
	461	SELECT CASE ( modus )
	462	CASE ( 'XY' )
	463	modus = 'XZ'
	464	CASE ( 'XZ' )
	465	modus = 'YZ'
	466	CASE ( 'YZ' )
	467	modus = 'no'
	468	END SELECT
[1]	469
[108]	470	ENDDO
[1]	471
	472
	473	!
[108]	474	!-- Combine the 3D-arrays
[1]	475
	476	!
[108]	477	!-- Inquire whether an avs fld file exists
	478	INQUIRE( FILE='PLOT3D_FLD'//TRIM( model_string ), EXIST=avs_output )
[1]	479
	480	!
[108]	481	!-- Inquire whether a NetCDF file exists
	482	INQUIRE( FILE='DATA_3D_NETCDF'//TRIM( model_string ), EXIST=netcdf_0 )
[1]	483
	484	!
[108]	485	!-- Inquire whether a NetCDF file for time-averaged data exists
	486	INQUIRE( FILE='DATA_3D_AV_NETCDF'//TRIM( model_string ), EXIST=netcdf_1 )
[1]	487
[108]	488	IF ( netcdf_0 .OR. netcdf_1 ) THEN
	489	netcdf_output = .TRUE.
	490	ELSE
	491	netcdf_output = .FALSE.
	492	ENDIF
[1]	493
	494	!
[108]	495	!-- Check, if file from PE0 exists
	496	danz = 0
	497	WRITE (id_string,'(I4.4)') danz
	498	INQUIRE ( &
	499	FILE='PLOT3D_DATA'//TRIM( model_string )//'_'//TRIM( id_string ), &
	500	EXIST=found )
[1]	501
	502	!
[108]	503	!-- Combination only works, if data are not compressed. In that case,
	504	!-- PALM created a flag file (PLOT3D_COMPRESSED)
	505	INQUIRE ( FILE='PLOT3D_COMPRESSED'//TRIM( model_string ), &
	506	EXIST=compressed )
[1]	507
	508	!
[108]	509	!-- Find out the number of files and open them
	510	DO WHILE ( found .AND. .NOT. compressed )
[1]	511
[108]	512	OPEN ( danz+110, &
	513	FILE='PLOT3D_DATA'//TRIM( model_string )//'_'//TRIM(id_string), &
	514	FORM='UNFORMATTED')
	515	danz = danz + 1
	516	WRITE (id_string,'(I4.4)') danz
	517	INQUIRE ( &
	518	FILE='PLOT3D_DATA'//TRIM( model_string )//'_'//TRIM(id_string), &
	519	EXIST=found )
[1]	520
[108]	521	ENDDO
[1]	522
	523	!
[108]	524	!-- Info-output
	525	PRINT*, ' '
	526	PRINT, ' combine_plot_fields *'
[1]	527	#if defined( __netcdf )
	528	IF ( netcdf_output ) PRINT*, ' NetCDF output enabled'
	529	#else
	530	IF ( netcdf_output ) THEN
	531	PRINT*, '--- Sorry, no NetCDF support on this host'
	532	netcdf_output = .FALSE.
	533	ENDIF
	534	#endif
[108]	535	IF ( danz /= 0 ) THEN
	536	PRINT*, ' 3D-data: ', danz, ' file(s) found'
[1]	537	ELSE
[108]	538	IF ( found .AND. compressed ) THEN
	539	PRINT*, '+++ no 3D-data processing, since data are compressed'
	540	ELSE
	541	PRINT*, ' no 3D-data file available'
	542	ENDIF
[1]	543	ENDIF
	544
[108]	545	IF ( netcdf_output .AND. danz /= 0 ) THEN
[1]	546	#if defined( __netcdf )
[108]	547	DO av = 0, 1
[1]	548
[108]	549	IF ( av == 0 .AND. .NOT. netcdf_0 ) CYCLE
	550	IF ( av == 1 .AND. .NOT. netcdf_1 ) CYCLE
[1]	551
	552	!
[108]	553	!-- Open NetCDF dataset
	554	IF ( av == 0 ) THEN
	555	filename = 'DATA_3D_NETCDF'//TRIM( model_string )
	556	ELSE
	557	filename = 'DATA_3D_AV_NETCDF'//TRIM( model_string )
	558	ENDIF
	559	nc_stat = NF90_OPEN( filename, NF90_WRITE, id_set(av) )
	560	IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 13 )
[1]	561
	562
	563	!
[108]	564	!-- Get the list of variables (order of variables corresponds with the
	565	!-- order of data on the binary file)
	566	var_list(av) = ' ' ! GET_ATT does not assign trailing blanks
	567	nc_stat = NF90_GET_ATT( id_set(av), NF90_GLOBAL, 'VAR_LIST', &
	568	var_list(av) )
	569	IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 14 )
[1]	570
	571	!
[108]	572	!-- Inquire id of the time coordinate variable
	573	nc_stat = NF90_INQ_VARID( id_set(av), 'time', id_var_time(av) )
	574	IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 15 )
[1]	575
	576	!
[108]	577	!-- Count number of variables; there is one more semicolon in the
	578	!-- string than variable names
	579	num_var(av) = -1
	580	DO i = 1, LEN( var_list(av) )
	581	IF ( var_list(av)(i:i) == ';' ) num_var(av) = num_var(av) + 1
	582	ENDDO
[1]	583
	584	!
[108]	585	!-- Extract the variable names from the list and inquire their NetCDF
	586	!-- IDs
	587	pos = INDEX( var_list(av), ';' )
[1]	588	!
[108]	589	!-- Loop over all variables
	590	DO i = 1, num_var(av)
[1]	591
	592	!
[108]	593	!-- Extract variable name from list
	594	var_list(av) = var_list(av)(pos+1:)
	595	pos = INDEX( var_list(av), ';' )
	596	var_name = var_list(av)(1:pos-1)
[1]	597
	598	!
[108]	599	!-- Get variable ID from name
	600	! print, '** find id for "',TRIM( var_name ),'" begin'
	601	nc_stat = NF90_INQ_VARID( id_set(av), TRIM( var_name ), &
	602	id_var(av,i) )
	603	IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 16 )
	604	! print, '** find id for "',TRIM( var_name ),'" end'
[1]	605
[108]	606	ENDDO
[1]	607
[108]	608	ENDDO ! av=0,1
[1]	609
[108]	610	ENDIF
[1]	611	#endif
	612
	613	!
[108]	614	!-- Read arrays, until the end of the file is reached
	615	current_var = 999999999
	616	fanz = 0
	617	DO WHILE ( danz /= 0 )
[1]	618
	619	!
[108]	620	!-- Loop over all files
	621	DO id = 0, danz-1
[1]	622	!
[108]	623	!-- File from PE0 contains special information at the beginning,
	624	!-- concerning the lower and upper indices of the total-domain used in
	625	!-- PALM (nxag, nxeg, nyag, nyeg, nzag, nzeg) and the lower and upper
	626	!-- indices of the array to be written by this routine (nxa, nxe, nya,
	627	!-- nye, nza, nze). Usually nxag=-1 and nxa=0, nyag=-1 and nya=0,
	628	!-- nzeg=nz and nze=nz_plot3d.
	629	!-- Allocate necessary array and open the output file.
	630	IF ( id == 0 .AND. fanz(0) == 0 .AND. fanz(1) == 0 ) THEN
	631	READ ( id+110 ) nxag, nxeg, nyag, nyeg, nzag, nzeg
	632	READ ( id+110 ) nxa, nxe, nya, nye, nza, nze
	633	ALLOCATE ( pf3d(nxag:nxeg,nyag:nyeg,nzag:nzeg) )
	634	IF ( avs_output ) THEN
	635	OPEN ( 2, FILE='PLOT3D_DATA'//TRIM( model_string ), &
	636	FORM='UNFORMATTED' )
	637	ENDIF
[1]	638	ENDIF
	639
	640	!
[108]	641	!-- Read output time
	642	IF ( netcdf_output .AND. id == 0 ) THEN
	643	IF ( netcdf_1 ) THEN
	644	READ ( id+110, END=999 ) simulated_time, time_step, av
	645	ELSE
[1]	646	!
[108]	647	!-- For compatibility with earlier PALM versions
	648	READ ( id+110, END=999 ) simulated_time, time_step
	649	av = 0
	650	ENDIF
[1]	651	ENDIF
	652
	653	!
[108]	654	!-- Read subdomain indices and grid point values
	655	READ ( id+110, END=999 ) xa, xe, ya, ye, za, ze
	656	READ ( id+110 ) pf3d(xa:xe,ya:ye,za:ze)
	657	IF ( id == 0 ) fanz(av) = fanz(av) + 1
[1]	658
[108]	659	ENDDO
[1]	660
	661	!
[108]	662	!-- Write data of the total domain
	663	IF ( avs_output ) WRITE ( 2 ) pf3d(nxa:nxe,nya:nye,nza:nze)
[1]	664
	665	!
[108]	666	!-- Write same data in NetCDF format
	667	IF ( netcdf_output ) THEN
[1]	668	#if defined( __netcdf )
	669	!
[108]	670	!-- Check if a new time step has begun; if yes write data to time axis
	671	IF ( current_var(av) > num_var(av) ) THEN
	672	current_var(av) = 1
	673	nc_stat = NF90_PUT_VAR( id_set(av), id_var_time(av), &
[1]	674	(/ simulated_time /),&
	675	start = (/ time_step /), count = (/ 1 /) )
[108]	676	IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 17 )
	677	ENDIF
[1]	678
	679	!
[108]	680	!-- Now write the data
	681	nc_stat = NF90_PUT_VAR( id_set(av), id_var(av,current_var(av)), &
[1]	682	pf3d(nxa:nxe,nya:nye,nza:nze), &
	683	start = (/ 1, 1, 1, time_step /), &
	684	count = (/ nxe-nxa+1, nye-nya+1, nze-nza+1, 1 /) )
[108]	685	IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 18 )
[1]	686
[108]	687	current_var(av) = current_var(av) + 1
[1]	688
	689	#endif
[108]	690	ENDIF
[1]	691
[108]	692	ENDDO
[1]	693
[108]	694	999 IF ( danz /= 0 ) THEN
[1]	695	!
[108]	696	!-- Print the number of arrays processed
	697	WRITE (*,'(16X,I4,A)') fanz(0)+fanz(1), ' array(s) processed'
	698	IF ( fanz(1) /= 0 ) THEN
	699	WRITE (*,'(16X,I4,A)') fanz(1), ' array(s) are time-averaged'
	700	ENDIF
[1]	701	!
[108]	702	!-- Close all files and deallocate array
	703	DO id = 0, danz-1
	704	CLOSE ( id+110 )
	705	ENDDO
	706	CLOSE ( 2 )
	707	DEALLOCATE ( pf3d )
[1]	708	!
[108]	709	!-- Close the NetCDF file
	710	IF ( netcdf_output ) THEN
[1]	711	#if defined( __netcdf )
[108]	712	IF ( netcdf_0 ) THEN
	713	nc_stat = NF90_CLOSE( id_set(0) )
	714	IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 19 )
	715	ENDIF
	716	IF ( netcdf_1 ) THEN
	717	nc_stat = NF90_CLOSE( id_set(1) )
	718	IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 20 )
	719	ENDIF
	720	#endif
[1]	721	ENDIF
	722	ENDIF
	723
[108]	724	ENDDO ! models
[1]	725
[108]	726
[1]	727	CONTAINS
	728
	729
	730	SUBROUTINE handle_netcdf_error( errno )
	731	!
	732	!-- Prints out a text message corresponding to the current NetCDF status
	733
	734	IMPLICIT NONE
	735
	736	INTEGER, INTENT(IN) :: errno
	737
	738	IF ( nc_stat /= NF90_NOERR ) THEN
	739	PRINT*, '+++ combine_plot_fields netcdf: ', av, errno, &
	740	TRIM( nf90_strerror( nc_stat ) )
	741	ENDIF
	742
	743	END SUBROUTINE handle_netcdf_error
	744
	745
	746	END PROGRAM combine_plot_fields
	747
	748
	749

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source: palm/trunk/UTIL/combine_plot_fields.f90 @ 149

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