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source: palm/trunk/SOURCE/data_output_3d.f90 @ 3318

Last change on this file since 3318 was 3294, checked in by raasch, 6 years ago
modularization of the ocean code
Property svn:keywords set to `Id`
File size: 30.7 KB

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1	!> @file data_output_3d.f90
2	!------------------------------------------------------------------------------!
3	! This file is part of the PALM model system.
4	!
5	! PALM is free software: you can redistribute it and/or modify it under the
6	! terms of the GNU General Public License as published by the Free Software
7	! Foundation, either version 3 of the License, or (at your option) any later
8	! version.
9	!
10	! PALM is distributed in the hope that it will be useful, but WITHOUT ANY
11	! WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR
12	! A PARTICULAR PURPOSE. See the GNU General Public License for more details.
13	!
14	! You should have received a copy of the GNU General Public License along with
15	! PALM. If not, see <http://www.gnu.org/licenses/>.
16	!
17	! Copyright 1997-2018 Leibniz Universitaet Hannover
18	!------------------------------------------------------------------------------!
19	!
20	! Current revisions:
21	! ------------------
22	!
23	!
24	! Former revisions:
25	! -----------------
26	! $Id: data_output_3d.f90 3294 2018-10-01 02:37:10Z sward $
27	! changes concerning modularization of ocean option
28	!
29	! 3274 2018-09-24 15:42:55Z knoop
30	! Modularization of all bulk cloud physics code components
31	!
32	! 3241 2018-09-12 15:02:00Z raasch
33	! unused variables and format statements removed
34	!
35	! 3049 2018-05-29 13:52:36Z Giersch
36	! Error messages revised
37	!
38	! 3045 2018-05-28 07:55:41Z Giersch
39	! Error message revised
40	!
41	! 3014 2018-05-09 08:42:38Z maronga
42	! Added nzb_do and nzt_do for some modules for 3d output
43	!
44	! 3004 2018-04-27 12:33:25Z Giersch
45	! Allocation checks implemented (averaged data will be assigned to fill values
46	! if no allocation happened so far)
47	!
48	! 2967 2018-04-13 11:22:08Z raasch
49	! bugfix: missing parallel cpp-directives added
50	!
51	! 2817 2018-02-19 16:32:21Z knoop
52	! Preliminary gust module interface implemented
53	!
54	! 2766 2018-01-22 17:17:47Z kanani
55	! Removed preprocessor directive __chem
56	!
57	! 2756 2018-01-16 18:11:14Z suehring
58	! Fill values for 3D output of chemical species introduced.
59	!
60	! 2746 2018-01-15 12:06:04Z suehring
61	! Move flag plant canopy to modules
62	!
63	! 2718 2018-01-02 08:49:38Z maronga
64	! Corrected "Former revisions" section
65	!
66	! 2696 2017-12-14 17:12:51Z kanani
67	! Change in file header (GPL part)
68	! Implementation of turbulence_closure_mod (TG)
69	! Implementation of chemistry module (FK)
70	! Set fill values at topography grid points or e.g. non-natural-type surface
71	! in case of LSM output (MS)
72	!
73	! 2512 2017-10-04 08:26:59Z raasch
74	! upper bounds of 3d output changed from nx+1,ny+1 to nx,ny
75	! no output of ghost layer data
76	!
77	! 2292 2017-06-20 09:51:42Z schwenkel
78	! Implementation of new microphysic scheme: cloud_scheme = 'morrison'
79	! includes two more prognostic equations for cloud drop concentration (nc)
80	! and cloud water content (qc).
81	!
82	! 2233 2017-05-30 18:08:54Z suehring
83	!
84	! 2232 2017-05-30 17:47:52Z suehring
85	! Adjustments to new topography concept
86	!
87	! 2209 2017-04-19 09:34:46Z kanani
88	! Added plant canopy model output
89	!
90	! 2031 2016-10-21 15:11:58Z knoop
91	! renamed variable rho to rho_ocean and rho_av to rho_ocean_av
92	!
93	! 2011 2016-09-19 17:29:57Z kanani
94	! Flag urban_surface is now defined in module control_parameters,
95	! changed prefix for urban surface model output to "usm_",
96	! introduced control parameter varnamelength for LEN of trimvar.
97	!
98	! 2007 2016-08-24 15:47:17Z kanani
99	! Added support for new urban surface model (temporary modifications of
100	! SELECT CASE ( ) necessary, see variable trimvar)
101	!
102	! 2000 2016-08-20 18:09:15Z knoop
103	! Forced header and separation lines into 80 columns
104	!
105	! 1980 2016-07-29 15:51:57Z suehring
106	! Bugfix, in order to steer user-defined output, setting flag found explicitly
107	! to .F.
108	!
109	! 1976 2016-07-27 13:28:04Z maronga
110	! Output of radiation quantities is now done directly in the respective module
111	!
112	! 1972 2016-07-26 07:52:02Z maronga
113	! Output of land surface quantities is now done directly in the respective module.
114	! Unnecessary directive __parallel removed.
115	!
116	! 1960 2016-07-12 16:34:24Z suehring
117	! Scalar surface flux added
118	!
119	! 1849 2016-04-08 11:33:18Z hoffmann
120	! prr moved to arrays_3d
121	!
122	! 1822 2016-04-07 07:49:42Z hoffmann
123	! prr vertical dimensions set to nzb_do to nzt_do. Unused variables deleted.
124	!
125	! 1808 2016-04-05 19:44:00Z raasch
126	! test output removed
127	!
128	! 1783 2016-03-06 18:36:17Z raasch
129	! name change of netcdf routines and module + related changes
130	!
131	! 1745 2016-02-05 13:06:51Z gronemeier
132	! Bugfix: test if time axis limit exceeds moved to point after call of check_open
133	!
134	! 1691 2015-10-26 16:17:44Z maronga
135	! Added output of radiative heating rates for RRTMG
136	!
137	! 1682 2015-10-07 23:56:08Z knoop
138	! Code annotations made doxygen readable
139	!
140	! 1585 2015-04-30 07:05:52Z maronga
141	! Added support for RRTMG
142	!
143	! 1551 2015-03-03 14:18:16Z maronga
144	! Added suppport for land surface model and radiation model output. In the course
145	! of this action, the limits for vertical loops have been changed (from nzb and
146	! nzt+1 to nzb_do and nzt_do, respectively in order to allow soil model output).
147	! Moreover, a new vertical grid zs was introduced.
148	!
149	! 1359 2014-04-11 17:15:14Z hoffmann
150	! New particle structure integrated.
151	!
152	! 1353 2014-04-08 15:21:23Z heinze
153	! REAL constants provided with KIND-attribute
154	!
155	! 1327 2014-03-21 11:00:16Z raasch
156	! parts concerning avs output removed,
157	! -netcdf output queries
158	!
159	! 1320 2014-03-20 08:40:49Z raasch
160	! ONLY-attribute added to USE-statements,
161	! kind-parameters added to all INTEGER and REAL declaration statements,
162	! kinds are defined in new module kinds,
163	! old module precision_kind is removed,
164	! revision history before 2012 removed,
165	! comment fields (!:) to be used for variable explanations added to
166	! all variable declaration statements
167	!
168	! 1318 2014-03-17 13:35:16Z raasch
169	! barrier argument removed from cpu_log,
170	! module interfaces removed
171	!
172	! 1308 2014-03-13 14:58:42Z fricke
173	! Check, if the limit of the time dimension is exceeded for parallel output
174	! To increase the performance for parallel output, the following is done:
175	! - Update of time axis is only done by PE0
176	!
177	! 1244 2013-10-31 08:16:56Z raasch
178	! Bugfix for index bounds in case of 3d-parallel output
179	!
180	! 1115 2013-03-26 18:16:16Z hoffmann
181	! ql is calculated by calc_liquid_water_content
182	!
183	! 1106 2013-03-04 05:31:38Z raasch
184	! array_kind renamed precision_kind
185	!
186	! 1076 2012-12-05 08:30:18Z hoffmann
187	! Bugfix in output of ql
188	!
189	! 1053 2012-11-13 17:11:03Z hoffmann
190	! +nr, qr, prr, qc and averaged quantities
191	!
192	! 1036 2012-10-22 13:43:42Z raasch
193	! code put under GPL (PALM 3.9)
194	!
195	! 1031 2012-10-19 14:35:30Z raasch
196	! netCDF4 without parallel file support implemented
197	!
198	! 1007 2012-09-19 14:30:36Z franke
199	! Bugfix: missing calculation of ql_vp added
200	!
201	! Revision 1.1 1997/09/03 06:29:36 raasch
202	! Initial revision
203	!
204	!
205	! Description:
206	! ------------
207	!> Output of the 3D-arrays in netCDF and/or AVS format.
208	!------------------------------------------------------------------------------!
209	SUBROUTINE data_output_3d( av )
210
211
212	USE arrays_3d, &
213	ONLY: d_exner, e, nc, nr, p, pt, prr, q, qc, ql, ql_c, ql_v, qr, s, &
214	tend, u, v, vpt, w
215
216	USE averaging
217
218	USE basic_constants_and_equations_mod, &
219	ONLY: lv_d_cp
220
221	USE bulk_cloud_model_mod, &
222	ONLY: bulk_cloud_model, bcm_data_output_3d
223
224	USE chemistry_model_mod, &
225	ONLY: chem_data_output_3d
226
227	USE control_parameters, &
228	ONLY: air_chemistry, do3d, do3d_no, do3d_time_count, &
229	io_blocks, io_group, land_surface, message_string, &
230	ntdim_3d, nz_do3d, ocean_mode, plant_canopy, &
231	psolver, simulated_time, time_since_reference_point, &
232	urban_surface, varnamelength
233
234	USE cpulog, &
235	ONLY: log_point, cpu_log
236
237	USE gust_mod, &
238	ONLY: gust_data_output_3d, gust_module_enabled
239
240	USE indices, &
241	ONLY: nbgp, nxl, nxlg, nxr, nxrg, nyn, nyng, nys, nysg, nzb, nzt, &
242	wall_flags_0
243
244	USE kinds
245
246	USE land_surface_model_mod, &
247	ONLY: lsm_data_output_3d, nzb_soil, nzt_soil
248
249	#if defined( __netcdf )
250	USE NETCDF
251	#endif
252
253	USE netcdf_interface, &
254	ONLY: fill_value, id_set_3d, id_var_do3d, id_var_time_3d, nc_stat, &
255	netcdf_data_format, netcdf_handle_error
256
257	USE ocean_mod, &
258	ONLY: ocean_data_output_3d
259
260	USE particle_attributes, &
261	ONLY: grid_particles, number_of_particles, particles, &
262	particle_advection_start, prt_count
263
264	USE pegrid
265
266	USE plant_canopy_model_mod, &
267	ONLY: pcm_data_output_3d
268
269	USE radiation_model_mod, &
270	ONLY: nzub, nzut, radiation, radiation_data_output_3d
271
272	USE turbulence_closure_mod, &
273	ONLY: tcm_data_output_3d
274
275	USE urban_surface_mod, &
276	ONLY: usm_data_output_3d
277
278
279	IMPLICIT NONE
280
281	INTEGER(iwp) :: av !<
282	INTEGER(iwp) :: flag_nr !< number of masking flag
283	INTEGER(iwp) :: i !<
284	INTEGER(iwp) :: if !<
285	INTEGER(iwp) :: j !<
286	INTEGER(iwp) :: k !<
287	INTEGER(iwp) :: n !<
288	INTEGER(iwp) :: nzb_do !< vertical lower limit for data output
289	INTEGER(iwp) :: nzt_do !< vertical upper limit for data output
290
291	LOGICAL :: found !<
292	LOGICAL :: resorted !<
293
294	REAL(wp) :: mean_r !<
295	REAL(wp) :: s_r2 !<
296	REAL(wp) :: s_r3 !<
297
298	REAL(sp), DIMENSION(:,:,:), ALLOCATABLE :: local_pf !<
299
300	REAL(wp), DIMENSION(:,:,:), POINTER :: to_be_resorted !<
301
302	CHARACTER (LEN=varnamelength) :: trimvar !< TRIM of output-variable string
303
304	!
305	!-- Return, if nothing to output
306	IF ( do3d_no(av) == 0 ) RETURN
307
308	CALL cpu_log (log_point(14),'data_output_3d','start')
309
310	!
311	!-- Open output file.
312	!-- For classic or 64bit netCDF output on more than one PE, each PE opens its
313	!-- own file and writes the data of its subdomain in binary format. After the
314	!-- run, these files are combined to one NetCDF file by combine_plot_fields.
315	!-- For netCDF4/HDF5 output, data is written in parallel into one file.
316	IF ( netcdf_data_format < 5 ) THEN
317	#if defined( __parallel )
318	CALL check_open( 30 )
319	#endif
320	IF ( myid == 0 ) CALL check_open( 106+av*10 )
321	ELSE
322	CALL check_open( 106+av*10 )
323	ENDIF
324
325	!
326	!-- For parallel netcdf output the time axis must be limited. Return, if this
327	!-- limit is exceeded. This could be the case, if the simulated time exceeds
328	!-- the given end time by the length of the given output interval.
329	IF ( netcdf_data_format > 4 ) THEN
330	IF ( do3d_time_count(av) + 1 > ntdim_3d(av) ) THEN
331	WRITE ( message_string, * ) 'Output of 3d data is not given at t=', &
332	simulated_time, '&because the maximum ', &
333	'number of output time levels is ', &
334	'exceeded.'
335	CALL message( 'data_output_3d', 'PA0387', 0, 1, 0, 6, 0 )
336	CALL cpu_log( log_point(14), 'data_output_3d', 'stop' )
337	RETURN
338	ENDIF
339	ENDIF
340
341	!
342	!-- Update the netCDF time axis
343	!-- In case of parallel output, this is only done by PE0 to increase the
344	!-- performance.
345	#if defined( __netcdf )
346	do3d_time_count(av) = do3d_time_count(av) + 1
347	IF ( myid == 0 ) THEN
348	nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_time_3d(av), &
349	(/ time_since_reference_point /), &
350	start = (/ do3d_time_count(av) /), &
351	count = (/ 1 /) )
352	CALL netcdf_handle_error( 'data_output_3d', 376 )
353	ENDIF
354	#endif
355
356	!
357	!-- Loop over all variables to be written.
358	if = 1
359
360	DO WHILE ( do3d(av,if)(1:1) /= ' ' )
361
362	!
363	!-- Temporary solution to account for data output within the new urban
364	!-- surface model (urban_surface_mod.f90), see also SELECT CASE ( trimvar ).
365	!-- Store the array chosen on the temporary array.
366	trimvar = TRIM( do3d(av,if) )
367	IF ( urban_surface .AND. trimvar(1:4) == 'usm_' ) THEN
368	trimvar = 'usm_output'
369	resorted = .TRUE.
370	nzb_do = nzub
371	nzt_do = nzut
372	ELSE
373	resorted = .FALSE.
374	nzb_do = nzb
375	nzt_do = nz_do3d
376	ENDIF
377	!
378	!-- Set flag to steer output of radiation, land-surface, or user-defined
379	!-- quantities
380	found = .FALSE.
381	!
382	!-- Allocate a temporary array with the desired output dimensions.
383	ALLOCATE( local_pf(nxl:nxr,nys:nyn,nzb_do:nzt_do) )
384	!
385	!-- Before each output, set array local_pf to fill value
386	local_pf = fill_value
387	!
388	!-- Set masking flag for topography for not resorted arrays
389	flag_nr = 0
390
391	SELECT CASE ( trimvar )
392
393	CASE ( 'e' )
394	IF ( av == 0 ) THEN
395	to_be_resorted => e
396	ELSE
397	IF ( .NOT. ALLOCATED( e_av ) ) THEN
398	ALLOCATE( e_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
399	e_av = REAL( fill_value, KIND = wp )
400	ENDIF
401	to_be_resorted => e_av
402	ENDIF
403
404	CASE ( 'lpt' )
405	IF ( av == 0 ) THEN
406	to_be_resorted => pt
407	ELSE
408	IF ( .NOT. ALLOCATED( lpt_av ) ) THEN
409	ALLOCATE( lpt_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
410	lpt_av = REAL( fill_value, KIND = wp )
411	ENDIF
412	to_be_resorted => lpt_av
413	ENDIF
414
415	CASE ( 'p' )
416	IF ( av == 0 ) THEN
417	IF ( psolver /= 'sor' ) CALL exchange_horiz( p, nbgp )
418	to_be_resorted => p
419	ELSE
420	IF ( .NOT. ALLOCATED( p_av ) ) THEN
421	ALLOCATE( p_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
422	p_av = REAL( fill_value, KIND = wp )
423	ENDIF
424	IF ( psolver /= 'sor' ) CALL exchange_horiz( p_av, nbgp )
425	to_be_resorted => p_av
426	ENDIF
427
428	CASE ( 'pc' ) ! particle concentration (requires ghostpoint exchange)
429	IF ( av == 0 ) THEN
430	IF ( simulated_time >= particle_advection_start ) THEN
431	tend = prt_count
432	ELSE
433	tend = 0.0_wp
434	ENDIF
435	DO i = nxl, nxr
436	DO j = nys, nyn
437	DO k = nzb_do, nzt_do
438	local_pf(i,j,k) = tend(k,j,i)
439	ENDDO
440	ENDDO
441	ENDDO
442	resorted = .TRUE.
443	ELSE
444	IF ( .NOT. ALLOCATED( pc_av ) ) THEN
445	ALLOCATE( pc_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
446	pc_av = REAL( fill_value, KIND = wp )
447	ENDIF
448	to_be_resorted => pc_av
449	ENDIF
450
451	CASE ( 'pr' ) ! mean particle radius (effective radius)
452	IF ( av == 0 ) THEN
453	IF ( simulated_time >= particle_advection_start ) THEN
454	DO i = nxl, nxr
455	DO j = nys, nyn
456	DO k = nzb_do, nzt_do
457	number_of_particles = prt_count(k,j,i)
458	IF (number_of_particles <= 0) CYCLE
459	particles => grid_particles(k,j,i)%particles(1:number_of_particles)
460	s_r2 = 0.0_wp
461	s_r3 = 0.0_wp
462	DO n = 1, number_of_particles
463	IF ( particles(n)%particle_mask ) THEN
464	s_r2 = s_r2 + particles(n)%radius*2 &
465	particles(n)%weight_factor
466	s_r3 = s_r3 + particles(n)%radius*3 &
467	particles(n)%weight_factor
468	ENDIF
469	ENDDO
470	IF ( s_r2 > 0.0_wp ) THEN
471	mean_r = s_r3 / s_r2
472	ELSE
473	mean_r = 0.0_wp
474	ENDIF
475	tend(k,j,i) = mean_r
476	ENDDO
477	ENDDO
478	ENDDO
479	ELSE
480	tend = 0.0_wp
481	ENDIF
482	DO i = nxl, nxr
483	DO j = nys, nyn
484	DO k = nzb_do, nzt_do
485	local_pf(i,j,k) = tend(k,j,i)
486	ENDDO
487	ENDDO
488	ENDDO
489	resorted = .TRUE.
490	ELSE
491	IF ( .NOT. ALLOCATED( pr_av ) ) THEN
492	ALLOCATE( pr_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
493	pr_av = REAL( fill_value, KIND = wp )
494	ENDIF
495	to_be_resorted => pr_av
496	ENDIF
497
498	CASE ( 'pt' )
499	IF ( av == 0 ) THEN
500	IF ( .NOT. bulk_cloud_model ) THEN
501	to_be_resorted => pt
502	ELSE
503	DO i = nxl, nxr
504	DO j = nys, nyn
505	DO k = nzb_do, nzt_do
506	local_pf(i,j,k) = pt(k,j,i) + lv_d_cp * &
507	d_exner(k) * &
508	ql(k,j,i)
509	ENDDO
510	ENDDO
511	ENDDO
512	resorted = .TRUE.
513	ENDIF
514	ELSE
515	IF ( .NOT. ALLOCATED( pt_av ) ) THEN
516	ALLOCATE( pt_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
517	pt_av = REAL( fill_value, KIND = wp )
518	ENDIF
519	to_be_resorted => pt_av
520	ENDIF
521
522	CASE ( 'q' )
523	IF ( av == 0 ) THEN
524	to_be_resorted => q
525	ELSE
526	IF ( .NOT. ALLOCATED( q_av ) ) THEN
527	ALLOCATE( q_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
528	q_av = REAL( fill_value, KIND = wp )
529	ENDIF
530	to_be_resorted => q_av
531	ENDIF
532
533	CASE ( 'ql' )
534	IF ( av == 0 ) THEN
535	to_be_resorted => ql
536	ELSE
537	IF ( .NOT. ALLOCATED( ql_av ) ) THEN
538	ALLOCATE( ql_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
539	ql_av = REAL( fill_value, KIND = wp )
540	ENDIF
541	to_be_resorted => ql_av
542	ENDIF
543
544	CASE ( 'ql_c' )
545	IF ( av == 0 ) THEN
546	to_be_resorted => ql_c
547	ELSE
548	IF ( .NOT. ALLOCATED( ql_c_av ) ) THEN
549	ALLOCATE( ql_c_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
550	ql_c_av = REAL( fill_value, KIND = wp )
551	ENDIF
552	to_be_resorted => ql_c_av
553	ENDIF
554
555	CASE ( 'ql_v' )
556	IF ( av == 0 ) THEN
557	to_be_resorted => ql_v
558	ELSE
559	IF ( .NOT. ALLOCATED( ql_v_av ) ) THEN
560	ALLOCATE( ql_v_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
561	ql_v_av = REAL( fill_value, KIND = wp )
562	ENDIF
563	to_be_resorted => ql_v_av
564	ENDIF
565
566	CASE ( 'ql_vp' )
567	IF ( av == 0 ) THEN
568	IF ( simulated_time >= particle_advection_start ) THEN
569	DO i = nxl, nxr
570	DO j = nys, nyn
571	DO k = nzb_do, nzt_do
572	number_of_particles = prt_count(k,j,i)
573	IF (number_of_particles <= 0) CYCLE
574	particles => grid_particles(k,j,i)%particles(1:number_of_particles)
575	DO n = 1, number_of_particles
576	IF ( particles(n)%particle_mask ) THEN
577	tend(k,j,i) = tend(k,j,i) + &
578	particles(n)%weight_factor / &
579	prt_count(k,j,i)
580	ENDIF
581	ENDDO
582	ENDDO
583	ENDDO
584	ENDDO
585	ELSE
586	tend = 0.0_wp
587	ENDIF
588	DO i = nxl, nxr
589	DO j = nys, nyn
590	DO k = nzb_do, nzt_do
591	local_pf(i,j,k) = tend(k,j,i)
592	ENDDO
593	ENDDO
594	ENDDO
595	resorted = .TRUE.
596	ELSE
597	IF ( .NOT. ALLOCATED( ql_vp_av ) ) THEN
598	ALLOCATE( ql_vp_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
599	ql_vp_av = REAL( fill_value, KIND = wp )
600	ENDIF
601	to_be_resorted => ql_vp_av
602	ENDIF
603
604	CASE ( 'qv' )
605	IF ( av == 0 ) THEN
606	DO i = nxl, nxr
607	DO j = nys, nyn
608	DO k = nzb_do, nzt_do
609	local_pf(i,j,k) = q(k,j,i) - ql(k,j,i)
610	ENDDO
611	ENDDO
612	ENDDO
613	resorted = .TRUE.
614	ELSE
615	IF ( .NOT. ALLOCATED( qv_av ) ) THEN
616	ALLOCATE( qv_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
617	qv_av = REAL( fill_value, KIND = wp )
618	ENDIF
619	to_be_resorted => qv_av
620	ENDIF
621
622	CASE ( 's' )
623	IF ( av == 0 ) THEN
624	to_be_resorted => s
625	ELSE
626	IF ( .NOT. ALLOCATED( s_av ) ) THEN
627	ALLOCATE( s_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
628	s_av = REAL( fill_value, KIND = wp )
629	ENDIF
630	to_be_resorted => s_av
631	ENDIF
632
633	CASE ( 'u' )
634	flag_nr = 1
635	IF ( av == 0 ) THEN
636	to_be_resorted => u
637	ELSE
638	IF ( .NOT. ALLOCATED( u_av ) ) THEN
639	ALLOCATE( u_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
640	u_av = REAL( fill_value, KIND = wp )
641	ENDIF
642	to_be_resorted => u_av
643	ENDIF
644
645	CASE ( 'v' )
646	flag_nr = 2
647	IF ( av == 0 ) THEN
648	to_be_resorted => v
649	ELSE
650	IF ( .NOT. ALLOCATED( v_av ) ) THEN
651	ALLOCATE( v_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
652	v_av = REAL( fill_value, KIND = wp )
653	ENDIF
654	to_be_resorted => v_av
655	ENDIF
656
657	CASE ( 'vpt' )
658	IF ( av == 0 ) THEN
659	to_be_resorted => vpt
660	ELSE
661	IF ( .NOT. ALLOCATED( vpt_av ) ) THEN
662	ALLOCATE( vpt_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
663	vpt_av = REAL( fill_value, KIND = wp )
664	ENDIF
665	to_be_resorted => vpt_av
666	ENDIF
667
668	CASE ( 'w' )
669	flag_nr = 3
670	IF ( av == 0 ) THEN
671	to_be_resorted => w
672	ELSE
673	IF ( .NOT. ALLOCATED( w_av ) ) THEN
674	ALLOCATE( w_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
675	w_av = REAL( fill_value, KIND = wp )
676	ENDIF
677	to_be_resorted => w_av
678	ENDIF
679	!
680	!-- Block of urban surface model outputs
681	CASE ( 'usm_output' )
682	CALL usm_data_output_3d( av, do3d(av,if), found, local_pf, &
683	nzb_do, nzt_do )
684
685	CASE DEFAULT
686
687	!
688	!-- Quantities of other modules
689	IF ( .NOT. found .AND. bulk_cloud_model ) THEN
690	CALL bcm_data_output_3d( av, do3d(av,if), found, local_pf, &
691	nzb_do, nzt_do )
692	resorted = .TRUE.
693	ENDIF
694
695	IF ( .NOT. found .AND. air_chemistry ) THEN
696	CALL chem_data_output_3d( av, do3d(av,if), found, &
697	local_pf, fill_value, nzb_do, nzt_do )
698	resorted = .TRUE.
699	ENDIF
700
701	IF ( .NOT. found .AND. gust_module_enabled ) THEN
702	CALL gust_data_output_3d( av, do3d(av,if), found, local_pf, &
703	nzb_do, nzt_do )
704	resorted = .TRUE.
705	ENDIF
706
707	IF ( .NOT. found .AND. land_surface ) THEN
708	!
709	!-- For soil model quantities, it is required to re-allocate local_pf
710	nzb_do = nzb_soil
711	nzt_do = nzt_soil
712
713	DEALLOCATE ( local_pf )
714	ALLOCATE( local_pf(nxl:nxr,nys:nyn,nzb_do:nzt_do) )
715	local_pf = fill_value
716
717	CALL lsm_data_output_3d( av, do3d(av,if), found, local_pf )
718	resorted = .TRUE.
719
720	!
721	!-- If no soil model variable was found, re-allocate local_pf
722	IF ( .NOT. found ) THEN
723	nzb_do = nzb
724	nzt_do = nz_do3d
725
726	DEALLOCATE ( local_pf )
727	ALLOCATE( local_pf(nxl:nxr,nys:nyn,nzb_do:nzt_do) )
728	ENDIF
729
730	ENDIF
731
732	IF ( .NOT. found .AND. ocean_mode ) THEN
733	CALL ocean_data_output_3d( av, do3d(av,if), found, local_pf, &
734	nzb_do, nzt_do )
735	resorted = .TRUE.
736	ENDIF
737
738	IF ( .NOT. found .AND. plant_canopy ) THEN
739	CALL pcm_data_output_3d( av, do3d(av,if), found, local_pf, &
740	fill_value, nzb_do, nzt_do )
741	resorted = .TRUE.
742	ENDIF
743
744	IF ( .NOT. found .AND. radiation ) THEN
745	CALL radiation_data_output_3d( av, do3d(av,if), found, &
746	local_pf, nzb_do, nzt_do )
747	resorted = .TRUE.
748	ENDIF
749
750	IF ( .NOT. found ) THEN
751	CALL tcm_data_output_3d( av, do3d(av,if), found, local_pf, &
752	nzb_do, nzt_do )
753	resorted = .TRUE.
754	ENDIF
755
756	!
757	!-- User defined quantities
758	IF ( .NOT. found ) THEN
759	CALL user_data_output_3d( av, do3d(av,if), found, local_pf, &
760	nzb_do, nzt_do )
761	resorted = .TRUE.
762	ENDIF
763
764	IF ( .NOT. found ) THEN
765	message_string = 'no output available for: ' // &
766	TRIM( do3d(av,if) )
767	CALL message( 'data_output_3d', 'PA0182', 0, 0, 0, 6, 0 )
768	ENDIF
769
770	END SELECT
771
772	!
773	!-- Resort the array to be output, if not done above
774	IF ( .NOT. resorted ) THEN
775	DO i = nxl, nxr
776	DO j = nys, nyn
777	DO k = nzb_do, nzt_do
778	local_pf(i,j,k) = MERGE( &
779	to_be_resorted(k,j,i), &
780	REAL( fill_value, KIND = wp ), &
781	BTEST( wall_flags_0(k,j,i), flag_nr ) )
782	ENDDO
783	ENDDO
784	ENDDO
785	ENDIF
786
787	!
788	!-- Output of the 3D-array
789	#if defined( __parallel )
790	IF ( netcdf_data_format < 5 ) THEN
791	!
792	!-- Non-parallel netCDF output. Data is output in parallel in
793	!-- FORTRAN binary format here, and later collected into one file by
794	!-- combine_plot_fields
795	IF ( myid == 0 ) THEN
796	WRITE ( 30 ) time_since_reference_point, &
797	do3d_time_count(av), av
798	ENDIF
799	DO i = 0, io_blocks-1
800	IF ( i == io_group ) THEN
801	WRITE ( 30 ) nxl, nxr, nys, nyn, nzb_do, nzt_do
802	WRITE ( 30 ) local_pf(:,:,nzb_do:nzt_do)
803	ENDIF
804
805	CALL MPI_BARRIER( comm2d, ierr )
806
807	ENDDO
808
809	ELSE
810	#if defined( __netcdf )
811	!
812	!-- Parallel output in netCDF4/HDF5 format.
813	! IF ( nxr == nx .AND. nyn /= ny ) THEN
814	! nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,if), &
815	! local_pf(nxl:nxr+1,nys:nyn,nzb_do:nzt_do), &
816	! start = (/ nxl+1, nys+1, nzb_do+1, do3d_time_count(av) /), &
817	! count = (/ nxr-nxl+2, nyn-nys+1, nzt_do-nzb_do+1, 1 /) )
818	! ELSEIF ( nxr /= nx .AND. nyn == ny ) THEN
819	! nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,if), &
820	! local_pf(nxl:nxr,nys:nyn+1,nzb_do:nzt_do), &
821	! start = (/ nxl+1, nys+1, nzb_do+1, do3d_time_count(av) /), &
822	! count = (/ nxr-nxl+1, nyn-nys+2, nzt_do-nzb_do+1, 1 /) )
823	! ELSEIF ( nxr == nx .AND. nyn == ny ) THEN
824	! nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,if), &
825	! local_pf(nxl:nxr+1,nys:nyn+1,nzb_do:nzt_do ), &
826	! start = (/ nxl+1, nys+1, nzb_do+1, do3d_time_count(av) /), &
827	! count = (/ nxr-nxl+2, nyn-nys+2, nzt_do-nzb_do+1, 1 /) )
828	! ELSE
829	nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,if), &
830	local_pf(nxl:nxr,nys:nyn,nzb_do:nzt_do), &
831	start = (/ nxl+1, nys+1, nzb_do+1, do3d_time_count(av) /), &
832	count = (/ nxr-nxl+1, nyn-nys+1, nzt_do-nzb_do+1, 1 /) )
833	! ENDIF
834	CALL netcdf_handle_error( 'data_output_3d', 386 )
835	#endif
836	ENDIF
837	#else
838	#if defined( __netcdf )
839	nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,if), &
840	local_pf(nxl:nxr+1,nys:nyn+1,nzb_do:nzt_do), &
841	start = (/ 1, 1, 1, do3d_time_count(av) /), &
842	count = (/ nx+1, ny+1, nzt_do-nzb_do+1, 1 /) )
843	CALL netcdf_handle_error( 'data_output_3d', 446 )
844	#endif
845	#endif
846
847	if = if + 1
848
849	!
850	!-- Deallocate temporary array
851	DEALLOCATE ( local_pf )
852
853	ENDDO
854
855	CALL cpu_log( log_point(14), 'data_output_3d', 'stop' )
856
857	END SUBROUTINE data_output_3d

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