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source: palm/trunk/SOURCE/data_output_3d.f90 @ 3946

Last change on this file since 3946 was 3885, checked in by kanani, 6 years ago
restructure/add location/debug messages
Property svn:keywords set to `Id`
File size: 31.2 KB

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1	!> @file data_output_3d.f90
2	!------------------------------------------------------------------------------!
3	! This file is part of the PALM model system.
4	!
5	! PALM is free software: you can redistribute it and/or modify it under the
6	! terms of the GNU General Public License as published by the Free Software
7	! Foundation, either version 3 of the License, or (at your option) any later
8	! version.
9	!
10	! PALM is distributed in the hope that it will be useful, but WITHOUT ANY
11	! WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR
12	! A PARTICULAR PURPOSE. See the GNU General Public License for more details.
13	!
14	! You should have received a copy of the GNU General Public License along with
15	! PALM. If not, see <http://www.gnu.org/licenses/>.
16	!
17	! Copyright 1997-2019 Leibniz Universitaet Hannover
18	!------------------------------------------------------------------------------!
19	!
20	! Current revisions:
21	! ------------------
22	!
23	!
24	! Former revisions:
25	! -----------------
26	! $Id: data_output_3d.f90 3885 2019-04-11 11:29:34Z hellstea $
27	! Changes related to global restructuring of location messages and introduction
28	! of additional debug messages
29	!
30	! 3814 2019-03-26 08:40:31Z pavelkrc
31	! unused variables removed
32	!
33	! 3655 2019-01-07 16:51:22Z knoop
34	! Bugfix: use time_since_reference_point instead of simulated_time (relevant
35	! when using wall/soil spinup)
36	!
37	! 3637 2018-12-20 01:51:36Z knoop
38	! Implementation of the PALM module interface
39	!
40	! 3589 2018-11-30 15:09:51Z suehring
41	! Move the control parameter "salsa" from salsa_mod to control_parameters
42	! (M. Kurppa)
43	!
44	! 3582 2018-11-29 19:16:36Z suehring
45	! add variable description; rename variable 'if' into 'ivar'
46	!
47	! 3525 2018-11-14 16:06:14Z kanani
48	! Changes related to clean-up of biometeorology (dom_dwd_user)
49	!
50	! 3467 2018-10-30 19:05:21Z suehring
51	! Implementation of a new aerosol module salsa.
52	!
53	! 3448 2018-10-29 18:14:31Z kanani
54	! Adjustment of biometeorology calls
55	!
56	! 3421 2018-10-24 18:39:32Z gronemeier
57	! Renamed output variables
58	!
59	! 3419 2018-10-24 17:27:31Z gronemeier
60	! bugfix: nx, ny are required in non-parallel case
61	!
62	! 3337 2018-10-12 15:17:09Z kanani
63	! (from branch resler)
64	! Add Biometeorology
65	!
66	! 3294 2018-10-01 02:37:10Z raasch
67	! changes concerning modularization of ocean option
68	!
69	! 3274 2018-09-24 15:42:55Z knoop
70	! Modularization of all bulk cloud physics code components
71	!
72	! 3241 2018-09-12 15:02:00Z raasch
73	! unused variables and format statements removed
74	!
75	! 3049 2018-05-29 13:52:36Z Giersch
76	! Error messages revised
77	!
78	! 3045 2018-05-28 07:55:41Z Giersch
79	! Error message revised
80	!
81	! 3014 2018-05-09 08:42:38Z maronga
82	! Added nzb_do and nzt_do for some modules for 3d output
83	!
84	! 3004 2018-04-27 12:33:25Z Giersch
85	! Allocation checks implemented (averaged data will be assigned to fill values
86	! if no allocation happened so far)
87	!
88	! 2967 2018-04-13 11:22:08Z raasch
89	! bugfix: missing parallel cpp-directives added
90	!
91	! 2817 2018-02-19 16:32:21Z knoop
92	! Preliminary gust module interface implemented
93	!
94	! 2766 2018-01-22 17:17:47Z kanani
95	! Removed preprocessor directive __chem
96	!
97	! 2756 2018-01-16 18:11:14Z suehring
98	! Fill values for 3D output of chemical species introduced.
99	!
100	! 2746 2018-01-15 12:06:04Z suehring
101	! Move flag plant canopy to modules
102	!
103	! 2718 2018-01-02 08:49:38Z maronga
104	! Corrected "Former revisions" section
105	!
106	! 2696 2017-12-14 17:12:51Z kanani
107	! Change in file header (GPL part)
108	! Implementation of turbulence_closure_mod (TG)
109	! Implementation of chemistry module (FK)
110	! Set fill values at topography grid points or e.g. non-natural-type surface
111	! in case of LSM output (MS)
112	!
113	! 2512 2017-10-04 08:26:59Z raasch
114	! upper bounds of 3d output changed from nx+1,ny+1 to nx,ny
115	! no output of ghost layer data
116	!
117	! 2292 2017-06-20 09:51:42Z schwenkel
118	! Implementation of new microphysic scheme: cloud_scheme = 'morrison'
119	! includes two more prognostic equations for cloud drop concentration (nc)
120	! and cloud water content (qc).
121	!
122	! 2233 2017-05-30 18:08:54Z suehring
123	!
124	! 2232 2017-05-30 17:47:52Z suehring
125	! Adjustments to new topography concept
126	!
127	! 2209 2017-04-19 09:34:46Z kanani
128	! Added plant canopy model output
129	!
130	! 2031 2016-10-21 15:11:58Z knoop
131	! renamed variable rho to rho_ocean and rho_av to rho_ocean_av
132	!
133	! 2011 2016-09-19 17:29:57Z kanani
134	! Flag urban_surface is now defined in module control_parameters,
135	! changed prefix for urban surface model output to "usm_",
136	! introduced control parameter varnamelength for LEN of trimvar.
137	!
138	! 2007 2016-08-24 15:47:17Z kanani
139	! Added support for new urban surface model (temporary modifications of
140	! SELECT CASE ( ) necessary, see variable trimvar)
141	!
142	! 2000 2016-08-20 18:09:15Z knoop
143	! Forced header and separation lines into 80 columns
144	!
145	! 1980 2016-07-29 15:51:57Z suehring
146	! Bugfix, in order to steer user-defined output, setting flag found explicitly
147	! to .F.
148	!
149	! 1976 2016-07-27 13:28:04Z maronga
150	! Output of radiation quantities is now done directly in the respective module
151	!
152	! 1972 2016-07-26 07:52:02Z maronga
153	! Output of land surface quantities is now done directly in the respective module.
154	! Unnecessary directive __parallel removed.
155	!
156	! 1960 2016-07-12 16:34:24Z suehring
157	! Scalar surface flux added
158	!
159	! 1849 2016-04-08 11:33:18Z hoffmann
160	! prr moved to arrays_3d
161	!
162	! 1822 2016-04-07 07:49:42Z hoffmann
163	! prr vertical dimensions set to nzb_do to nzt_do. Unused variables deleted.
164	!
165	! 1808 2016-04-05 19:44:00Z raasch
166	! test output removed
167	!
168	! 1783 2016-03-06 18:36:17Z raasch
169	! name change of netcdf routines and module + related changes
170	!
171	! 1745 2016-02-05 13:06:51Z gronemeier
172	! Bugfix: test if time axis limit exceeds moved to point after call of check_open
173	!
174	! 1691 2015-10-26 16:17:44Z maronga
175	! Added output of radiative heating rates for RRTMG
176	!
177	! 1682 2015-10-07 23:56:08Z knoop
178	! Code annotations made doxygen readable
179	!
180	! 1585 2015-04-30 07:05:52Z maronga
181	! Added support for RRTMG
182	!
183	! 1551 2015-03-03 14:18:16Z maronga
184	! Added suppport for land surface model and radiation model output. In the course
185	! of this action, the limits for vertical loops have been changed (from nzb and
186	! nzt+1 to nzb_do and nzt_do, respectively in order to allow soil model output).
187	! Moreover, a new vertical grid zs was introduced.
188	!
189	! 1359 2014-04-11 17:15:14Z hoffmann
190	! New particle structure integrated.
191	!
192	! 1353 2014-04-08 15:21:23Z heinze
193	! REAL constants provided with KIND-attribute
194	!
195	! 1327 2014-03-21 11:00:16Z raasch
196	! parts concerning avs output removed,
197	! -netcdf output queries
198	!
199	! 1320 2014-03-20 08:40:49Z raasch
200	! ONLY-attribute added to USE-statements,
201	! kind-parameters added to all INTEGER and REAL declaration statements,
202	! kinds are defined in new module kinds,
203	! old module precision_kind is removed,
204	! revision history before 2012 removed,
205	! comment fields (!:) to be used for variable explanations added to
206	! all variable declaration statements
207	!
208	! 1318 2014-03-17 13:35:16Z raasch
209	! barrier argument removed from cpu_log,
210	! module interfaces removed
211	!
212	! 1308 2014-03-13 14:58:42Z fricke
213	! Check, if the limit of the time dimension is exceeded for parallel output
214	! To increase the performance for parallel output, the following is done:
215	! - Update of time axis is only done by PE0
216	!
217	! 1244 2013-10-31 08:16:56Z raasch
218	! Bugfix for index bounds in case of 3d-parallel output
219	!
220	! 1115 2013-03-26 18:16:16Z hoffmann
221	! ql is calculated by calc_liquid_water_content
222	!
223	! 1106 2013-03-04 05:31:38Z raasch
224	! array_kind renamed precision_kind
225	!
226	! 1076 2012-12-05 08:30:18Z hoffmann
227	! Bugfix in output of ql
228	!
229	! 1053 2012-11-13 17:11:03Z hoffmann
230	! +nr, qr, prr, qc and averaged quantities
231	!
232	! 1036 2012-10-22 13:43:42Z raasch
233	! code put under GPL (PALM 3.9)
234	!
235	! 1031 2012-10-19 14:35:30Z raasch
236	! netCDF4 without parallel file support implemented
237	!
238	! 1007 2012-09-19 14:30:36Z franke
239	! Bugfix: missing calculation of ql_vp added
240	!
241	! Revision 1.1 1997/09/03 06:29:36 raasch
242	! Initial revision
243	!
244	!
245	! Description:
246	! ------------
247	!> Output of the 3D-arrays in netCDF and/or AVS format.
248	!------------------------------------------------------------------------------!
249	SUBROUTINE data_output_3d( av )
250
251
252	USE arrays_3d, &
253	ONLY: d_exner, e, p, pt, q, ql, ql_c, ql_v, s, tend, u, v, vpt, w
254
255	USE averaging
256
257	USE basic_constants_and_equations_mod, &
258	ONLY: lv_d_cp
259
260	USE bulk_cloud_model_mod, &
261	ONLY: bulk_cloud_model
262
263	USE control_parameters, &
264	ONLY: debug_output, debug_string, &
265	do3d, do3d_no, do3d_time_count, io_blocks, io_group, &
266	land_surface, message_string, ntdim_3d, nz_do3d, psolver, &
267	time_since_reference_point, urban_surface, varnamelength
268
269	USE cpulog, &
270	ONLY: log_point, cpu_log
271
272	#if defined( __parallel )
273	USE indices, &
274	ONLY: nbgp, nxl, nxlg, nxr, nxrg, nyn, nyng, nys, nysg, nzb, nzt, &
275	wall_flags_0
276	#else
277	USE indices, &
278	ONLY: nbgp, nx, nxl, nxlg, nxr, nxrg, ny, nyn, nyng, nys, nysg, nzb, &
279	nzt, wall_flags_0
280	#endif
281
282	USE kinds
283
284	USE land_surface_model_mod, &
285	ONLY: lsm_data_output_3d, nzb_soil, nzt_soil
286
287	USE module_interface, &
288	ONLY: module_interface_data_output_3d
289
290	#if defined( __netcdf )
291	USE NETCDF
292	#endif
293
294	USE netcdf_interface, &
295	ONLY: fill_value, id_set_3d, id_var_do3d, id_var_time_3d, nc_stat, &
296	netcdf_data_format, netcdf_handle_error
297
298	USE particle_attributes, &
299	ONLY: grid_particles, number_of_particles, particles, &
300	particle_advection_start, prt_count
301
302	USE pegrid
303
304	USE radiation_model_mod, &
305	ONLY: nz_urban_b, nz_urban_t
306
307	USE turbulence_closure_mod, &
308	ONLY: tcm_data_output_3d
309
310	USE urban_surface_mod, &
311	ONLY: usm_data_output_3d
312
313
314	IMPLICIT NONE
315
316	INTEGER(iwp) :: av !< flag for (non-)average output
317	INTEGER(iwp) :: flag_nr !< number of masking flag
318	INTEGER(iwp) :: i !< loop index
319	INTEGER(iwp) :: ivar !< variable index
320	INTEGER(iwp) :: j !< loop index
321	INTEGER(iwp) :: k !< loop index
322	INTEGER(iwp) :: n !< loop index
323	INTEGER(iwp) :: nzb_do !< vertical lower limit for data output
324	INTEGER(iwp) :: nzt_do !< vertical upper limit for data output
325
326	LOGICAL :: found !< true if output variable was found
327	LOGICAL :: resorted !< true if variable is resorted
328
329	REAL(wp) :: mean_r !< mean particle radius
330	REAL(wp) :: s_r2 !< sum( particle-radius**2 )
331	REAL(wp) :: s_r3 !< sum( particle-radius**3 )
332
333	REAL(sp), DIMENSION(:,:,:), ALLOCATABLE :: local_pf !< output array
334
335	REAL(wp), DIMENSION(:,:,:), POINTER :: to_be_resorted !< pointer to array which shall be output
336
337	CHARACTER (LEN=varnamelength) :: trimvar !< TRIM of output-variable string
338
339	!
340	!-- Return, if nothing to output
341	IF ( do3d_no(av) == 0 ) RETURN
342
343	IF ( debug_output ) THEN
344	WRITE( debug_string, * ) 'data_output_3d'
345	CALL debug_message( debug_string, 'start' )
346	ENDIF
347
348	CALL cpu_log (log_point(14),'data_output_3d','start')
349
350	!
351	!-- Open output file.
352	!-- For classic or 64bit netCDF output on more than one PE, each PE opens its
353	!-- own file and writes the data of its subdomain in binary format. After the
354	!-- run, these files are combined to one NetCDF file by combine_plot_fields.
355	!-- For netCDF4/HDF5 output, data is written in parallel into one file.
356	IF ( netcdf_data_format < 5 ) THEN
357	#if defined( __parallel )
358	CALL check_open( 30 )
359	#endif
360	IF ( myid == 0 ) CALL check_open( 106+av*10 )
361	ELSE
362	CALL check_open( 106+av*10 )
363	ENDIF
364
365	!
366	!-- For parallel netcdf output the time axis must be limited. Return, if this
367	!-- limit is exceeded. This could be the case, if the simulated time exceeds
368	!-- the given end time by the length of the given output interval.
369	IF ( netcdf_data_format > 4 ) THEN
370	IF ( do3d_time_count(av) + 1 > ntdim_3d(av) ) THEN
371	WRITE ( message_string, * ) 'Output of 3d data is not given at t=', &
372	time_since_reference_point, 's because the maximum ', &
373	'number of output time levels is ', &
374	'exceeded.'
375	CALL message( 'data_output_3d', 'PA0387', 0, 1, 0, 6, 0 )
376	CALL cpu_log( log_point(14), 'data_output_3d', 'stop' )
377	RETURN
378	ENDIF
379	ENDIF
380
381	!
382	!-- Update the netCDF time axis
383	!-- In case of parallel output, this is only done by PE0 to increase the
384	!-- performance.
385	#if defined( __netcdf )
386	do3d_time_count(av) = do3d_time_count(av) + 1
387	IF ( myid == 0 ) THEN
388	nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_time_3d(av), &
389	(/ time_since_reference_point /), &
390	start = (/ do3d_time_count(av) /), &
391	count = (/ 1 /) )
392	CALL netcdf_handle_error( 'data_output_3d', 376 )
393	ENDIF
394	#endif
395
396	!
397	!-- Loop over all variables to be written.
398	ivar = 1
399
400	DO WHILE ( do3d(av,ivar)(1:1) /= ' ' )
401
402	!
403	!-- Initiate found flag and resorting flag
404	found = .FALSE.
405	resorted = .FALSE.
406	!
407	!-- Temporary solution to account for data output within the new urban
408	!-- surface model (urban_surface_mod.f90), see also SELECT CASE ( trimvar ).
409	!-- Store the array chosen on the temporary array.
410	nzb_do = nzb
411	nzt_do = nz_do3d
412
413	trimvar = TRIM( do3d(av,ivar) )
414	!
415	!-- Allocate a temporary array with the desired output dimensions.
416	ALLOCATE( local_pf(nxl:nxr,nys:nyn,nzb_do:nzt_do) )
417	!
418	!-- Before each output, set array local_pf to fill value
419	local_pf = fill_value
420	!
421	!-- Set masking flag for topography for not resorted arrays
422	flag_nr = 0
423
424	SELECT CASE ( trimvar )
425
426	CASE ( 'e' )
427	IF ( av == 0 ) THEN
428	to_be_resorted => e
429	ELSE
430	IF ( .NOT. ALLOCATED( e_av ) ) THEN
431	ALLOCATE( e_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
432	e_av = REAL( fill_value, KIND = wp )
433	ENDIF
434	to_be_resorted => e_av
435	ENDIF
436
437	CASE ( 'thetal' )
438	IF ( av == 0 ) THEN
439	to_be_resorted => pt
440	ELSE
441	IF ( .NOT. ALLOCATED( lpt_av ) ) THEN
442	ALLOCATE( lpt_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
443	lpt_av = REAL( fill_value, KIND = wp )
444	ENDIF
445	to_be_resorted => lpt_av
446	ENDIF
447
448	CASE ( 'p' )
449	IF ( av == 0 ) THEN
450	IF ( psolver /= 'sor' ) CALL exchange_horiz( p, nbgp )
451	to_be_resorted => p
452	ELSE
453	IF ( .NOT. ALLOCATED( p_av ) ) THEN
454	ALLOCATE( p_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
455	p_av = REAL( fill_value, KIND = wp )
456	ENDIF
457	IF ( psolver /= 'sor' ) CALL exchange_horiz( p_av, nbgp )
458	to_be_resorted => p_av
459	ENDIF
460
461	CASE ( 'pc' ) ! particle concentration (requires ghostpoint exchange)
462	IF ( av == 0 ) THEN
463	IF ( time_since_reference_point >= particle_advection_start ) THEN
464	tend = prt_count
465	ELSE
466	tend = 0.0_wp
467	ENDIF
468	DO i = nxl, nxr
469	DO j = nys, nyn
470	DO k = nzb_do, nzt_do
471	local_pf(i,j,k) = tend(k,j,i)
472	ENDDO
473	ENDDO
474	ENDDO
475	resorted = .TRUE.
476	ELSE
477	IF ( .NOT. ALLOCATED( pc_av ) ) THEN
478	ALLOCATE( pc_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
479	pc_av = REAL( fill_value, KIND = wp )
480	ENDIF
481	to_be_resorted => pc_av
482	ENDIF
483
484	CASE ( 'pr' ) ! mean particle radius (effective radius)
485	IF ( av == 0 ) THEN
486	IF ( time_since_reference_point >= particle_advection_start ) THEN
487	DO i = nxl, nxr
488	DO j = nys, nyn
489	DO k = nzb_do, nzt_do
490	number_of_particles = prt_count(k,j,i)
491	IF (number_of_particles <= 0) CYCLE
492	particles => grid_particles(k,j,i)%particles(1:number_of_particles)
493	s_r2 = 0.0_wp
494	s_r3 = 0.0_wp
495	DO n = 1, number_of_particles
496	IF ( particles(n)%particle_mask ) THEN
497	s_r2 = s_r2 + particles(n)%radius*2 &
498	particles(n)%weight_factor
499	s_r3 = s_r3 + particles(n)%radius*3 &
500	particles(n)%weight_factor
501	ENDIF
502	ENDDO
503	IF ( s_r2 > 0.0_wp ) THEN
504	mean_r = s_r3 / s_r2
505	ELSE
506	mean_r = 0.0_wp
507	ENDIF
508	tend(k,j,i) = mean_r
509	ENDDO
510	ENDDO
511	ENDDO
512	ELSE
513	tend = 0.0_wp
514	ENDIF
515	DO i = nxl, nxr
516	DO j = nys, nyn
517	DO k = nzb_do, nzt_do
518	local_pf(i,j,k) = tend(k,j,i)
519	ENDDO
520	ENDDO
521	ENDDO
522	resorted = .TRUE.
523	ELSE
524	IF ( .NOT. ALLOCATED( pr_av ) ) THEN
525	ALLOCATE( pr_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
526	pr_av = REAL( fill_value, KIND = wp )
527	ENDIF
528	to_be_resorted => pr_av
529	ENDIF
530
531	CASE ( 'theta' )
532	IF ( av == 0 ) THEN
533	IF ( .NOT. bulk_cloud_model ) THEN
534	to_be_resorted => pt
535	ELSE
536	DO i = nxl, nxr
537	DO j = nys, nyn
538	DO k = nzb_do, nzt_do
539	local_pf(i,j,k) = pt(k,j,i) + lv_d_cp * &
540	d_exner(k) * &
541	ql(k,j,i)
542	ENDDO
543	ENDDO
544	ENDDO
545	resorted = .TRUE.
546	ENDIF
547	ELSE
548	IF ( .NOT. ALLOCATED( pt_av ) ) THEN
549	ALLOCATE( pt_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
550	pt_av = REAL( fill_value, KIND = wp )
551	ENDIF
552	to_be_resorted => pt_av
553	ENDIF
554
555	CASE ( 'q' )
556	IF ( av == 0 ) THEN
557	to_be_resorted => q
558	ELSE
559	IF ( .NOT. ALLOCATED( q_av ) ) THEN
560	ALLOCATE( q_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
561	q_av = REAL( fill_value, KIND = wp )
562	ENDIF
563	to_be_resorted => q_av
564	ENDIF
565
566	CASE ( 'ql' )
567	IF ( av == 0 ) THEN
568	to_be_resorted => ql
569	ELSE
570	IF ( .NOT. ALLOCATED( ql_av ) ) THEN
571	ALLOCATE( ql_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
572	ql_av = REAL( fill_value, KIND = wp )
573	ENDIF
574	to_be_resorted => ql_av
575	ENDIF
576
577	CASE ( 'ql_c' )
578	IF ( av == 0 ) THEN
579	to_be_resorted => ql_c
580	ELSE
581	IF ( .NOT. ALLOCATED( ql_c_av ) ) THEN
582	ALLOCATE( ql_c_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
583	ql_c_av = REAL( fill_value, KIND = wp )
584	ENDIF
585	to_be_resorted => ql_c_av
586	ENDIF
587
588	CASE ( 'ql_v' )
589	IF ( av == 0 ) THEN
590	to_be_resorted => ql_v
591	ELSE
592	IF ( .NOT. ALLOCATED( ql_v_av ) ) THEN
593	ALLOCATE( ql_v_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
594	ql_v_av = REAL( fill_value, KIND = wp )
595	ENDIF
596	to_be_resorted => ql_v_av
597	ENDIF
598
599	CASE ( 'ql_vp' )
600	IF ( av == 0 ) THEN
601	IF ( time_since_reference_point >= particle_advection_start ) THEN
602	DO i = nxl, nxr
603	DO j = nys, nyn
604	DO k = nzb_do, nzt_do
605	number_of_particles = prt_count(k,j,i)
606	IF (number_of_particles <= 0) CYCLE
607	particles => grid_particles(k,j,i)%particles(1:number_of_particles)
608	DO n = 1, number_of_particles
609	IF ( particles(n)%particle_mask ) THEN
610	tend(k,j,i) = tend(k,j,i) + &
611	particles(n)%weight_factor / &
612	prt_count(k,j,i)
613	ENDIF
614	ENDDO
615	ENDDO
616	ENDDO
617	ENDDO
618	ELSE
619	tend = 0.0_wp
620	ENDIF
621	DO i = nxl, nxr
622	DO j = nys, nyn
623	DO k = nzb_do, nzt_do
624	local_pf(i,j,k) = tend(k,j,i)
625	ENDDO
626	ENDDO
627	ENDDO
628	resorted = .TRUE.
629	ELSE
630	IF ( .NOT. ALLOCATED( ql_vp_av ) ) THEN
631	ALLOCATE( ql_vp_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
632	ql_vp_av = REAL( fill_value, KIND = wp )
633	ENDIF
634	to_be_resorted => ql_vp_av
635	ENDIF
636
637	CASE ( 'qv' )
638	IF ( av == 0 ) THEN
639	DO i = nxl, nxr
640	DO j = nys, nyn
641	DO k = nzb_do, nzt_do
642	local_pf(i,j,k) = q(k,j,i) - ql(k,j,i)
643	ENDDO
644	ENDDO
645	ENDDO
646	resorted = .TRUE.
647	ELSE
648	IF ( .NOT. ALLOCATED( qv_av ) ) THEN
649	ALLOCATE( qv_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
650	qv_av = REAL( fill_value, KIND = wp )
651	ENDIF
652	to_be_resorted => qv_av
653	ENDIF
654
655	CASE ( 's' )
656	IF ( av == 0 ) THEN
657	to_be_resorted => s
658	ELSE
659	IF ( .NOT. ALLOCATED( s_av ) ) THEN
660	ALLOCATE( s_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
661	s_av = REAL( fill_value, KIND = wp )
662	ENDIF
663	to_be_resorted => s_av
664	ENDIF
665
666	CASE ( 'u' )
667	flag_nr = 1
668	IF ( av == 0 ) THEN
669	to_be_resorted => u
670	ELSE
671	IF ( .NOT. ALLOCATED( u_av ) ) THEN
672	ALLOCATE( u_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
673	u_av = REAL( fill_value, KIND = wp )
674	ENDIF
675	to_be_resorted => u_av
676	ENDIF
677
678	CASE ( 'v' )
679	flag_nr = 2
680	IF ( av == 0 ) THEN
681	to_be_resorted => v
682	ELSE
683	IF ( .NOT. ALLOCATED( v_av ) ) THEN
684	ALLOCATE( v_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
685	v_av = REAL( fill_value, KIND = wp )
686	ENDIF
687	to_be_resorted => v_av
688	ENDIF
689
690	CASE ( 'thetav' )
691	IF ( av == 0 ) THEN
692	to_be_resorted => vpt
693	ELSE
694	IF ( .NOT. ALLOCATED( vpt_av ) ) THEN
695	ALLOCATE( vpt_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
696	vpt_av = REAL( fill_value, KIND = wp )
697	ENDIF
698	to_be_resorted => vpt_av
699	ENDIF
700
701	CASE ( 'w' )
702	flag_nr = 3
703	IF ( av == 0 ) THEN
704	to_be_resorted => w
705	ELSE
706	IF ( .NOT. ALLOCATED( w_av ) ) THEN
707	ALLOCATE( w_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
708	w_av = REAL( fill_value, KIND = wp )
709	ENDIF
710	to_be_resorted => w_av
711	ENDIF
712
713	CASE DEFAULT
714
715	IF ( .NOT. found ) THEN
716	CALL tcm_data_output_3d( av, trimvar, found, local_pf, &
717	nzb_do, nzt_do )
718	resorted = .TRUE.
719	ENDIF
720
721	!
722	!-- Quantities of other modules
723	IF ( .NOT. found ) THEN
724	CALL module_interface_data_output_3d( &
725	av, trimvar, found, local_pf, &
726	fill_value, resorted, nzb_do, nzt_do &
727	)
728	ENDIF
729
730	!
731	!-- Temporary workaround: ToDo: refactor local_pf allocation
732	IF ( .NOT. found .AND. urban_surface .AND. trimvar(1:4) == 'usm_' ) THEN
733	!
734	!-- For urban model quantities, it is required to re-allocate local_pf
735	nzb_do = nz_urban_b
736	nzt_do = nz_urban_t
737
738	DEALLOCATE ( local_pf )
739	ALLOCATE( local_pf(nxl:nxr,nys:nyn,nzb_do:nzt_do) )
740	local_pf = fill_value
741
742	CALL usm_data_output_3d( av, trimvar, found, local_pf, &
743	nzb_do, nzt_do )
744	resorted = .TRUE.
745
746	!
747	!-- If no soil model variable was found, re-allocate local_pf
748	IF ( .NOT. found ) THEN
749	nzb_do = nzb
750	nzt_do = nz_do3d
751
752	DEALLOCATE ( local_pf )
753	ALLOCATE( local_pf(nxl:nxr,nys:nyn,nzb_do:nzt_do) )
754	ENDIF
755
756	ENDIF
757
758	!
759	!-- Temporary workaround: ToDo: refactor local_pf allocation
760	IF ( .NOT. found .AND. land_surface ) THEN
761	!
762	!-- For soil model quantities, it is required to re-allocate local_pf
763	nzb_do = nzb_soil
764	nzt_do = nzt_soil
765
766	DEALLOCATE ( local_pf )
767	ALLOCATE( local_pf(nxl:nxr,nys:nyn,nzb_do:nzt_do) )
768	local_pf = fill_value
769
770	CALL lsm_data_output_3d( av, trimvar, found, local_pf )
771	resorted = .TRUE.
772
773	!
774	!-- If no soil model variable was found, re-allocate local_pf
775	IF ( .NOT. found ) THEN
776	nzb_do = nzb
777	nzt_do = nz_do3d
778
779	DEALLOCATE ( local_pf )
780	ALLOCATE( local_pf(nxl:nxr,nys:nyn,nzb_do:nzt_do) )
781	ENDIF
782
783	ENDIF
784
785	IF ( .NOT. found ) THEN
786	message_string = 'no output available for: ' // &
787	TRIM( do3d(av,ivar) )
788	CALL message( 'data_output_3d', 'PA0182', 0, 0, 0, 6, 0 )
789	ENDIF
790
791	END SELECT
792
793	!
794	!-- Resort the array to be output, if not done above
795	IF ( .NOT. resorted ) THEN
796	DO i = nxl, nxr
797	DO j = nys, nyn
798	DO k = nzb_do, nzt_do
799	local_pf(i,j,k) = MERGE( &
800	to_be_resorted(k,j,i), &
801	REAL( fill_value, KIND = wp ), &
802	BTEST( wall_flags_0(k,j,i), flag_nr ) )
803	ENDDO
804	ENDDO
805	ENDDO
806	ENDIF
807
808	!
809	!-- Output of the 3D-array
810	#if defined( __parallel )
811	IF ( netcdf_data_format < 5 ) THEN
812	!
813	!-- Non-parallel netCDF output. Data is output in parallel in
814	!-- FORTRAN binary format here, and later collected into one file by
815	!-- combine_plot_fields
816	IF ( myid == 0 ) THEN
817	WRITE ( 30 ) time_since_reference_point, &
818	do3d_time_count(av), av
819	ENDIF
820	DO i = 0, io_blocks-1
821	IF ( i == io_group ) THEN
822	WRITE ( 30 ) nxl, nxr, nys, nyn, nzb_do, nzt_do
823	WRITE ( 30 ) local_pf(:,:,nzb_do:nzt_do)
824	ENDIF
825
826	CALL MPI_BARRIER( comm2d, ierr )
827
828	ENDDO
829
830	ELSE
831	#if defined( __netcdf )
832	!
833	!-- Parallel output in netCDF4/HDF5 format.
834	! IF ( nxr == nx .AND. nyn /= ny ) THEN
835	! nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,ivar), &
836	! local_pf(nxl:nxr+1,nys:nyn,nzb_do:nzt_do), &
837	! start = (/ nxl+1, nys+1, nzb_do+1, do3d_time_count(av) /), &
838	! count = (/ nxr-nxl+2, nyn-nys+1, nzt_do-nzb_do+1, 1 /) )
839	! ELSEIF ( nxr /= nx .AND. nyn == ny ) THEN
840	! nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,ivar), &
841	! local_pf(nxl:nxr,nys:nyn+1,nzb_do:nzt_do), &
842	! start = (/ nxl+1, nys+1, nzb_do+1, do3d_time_count(av) /), &
843	! count = (/ nxr-nxl+1, nyn-nys+2, nzt_do-nzb_do+1, 1 /) )
844	! ELSEIF ( nxr == nx .AND. nyn == ny ) THEN
845	! nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,ivar), &
846	! local_pf(nxl:nxr+1,nys:nyn+1,nzb_do:nzt_do ), &
847	! start = (/ nxl+1, nys+1, nzb_do+1, do3d_time_count(av) /), &
848	! count = (/ nxr-nxl+2, nyn-nys+2, nzt_do-nzb_do+1, 1 /) )
849	! ELSE
850	nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,ivar), &
851	local_pf(nxl:nxr,nys:nyn,nzb_do:nzt_do), &
852	start = (/ nxl+1, nys+1, nzb_do+1, do3d_time_count(av) /), &
853	count = (/ nxr-nxl+1, nyn-nys+1, nzt_do-nzb_do+1, 1 /) )
854	! ENDIF
855	CALL netcdf_handle_error( 'data_output_3d', 386 )
856	#endif
857	ENDIF
858	#else
859	#if defined( __netcdf )
860	nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,ivar), &
861	local_pf(nxl:nxr+1,nys:nyn+1,nzb_do:nzt_do), &
862	start = (/ 1, 1, 1, do3d_time_count(av) /), &
863	count = (/ nx+1, ny+1, nzt_do-nzb_do+1, 1 /) )
864	CALL netcdf_handle_error( 'data_output_3d', 446 )
865	#endif
866	#endif
867
868	ivar = ivar + 1
869
870	!
871	!-- Deallocate temporary array
872	DEALLOCATE ( local_pf )
873
874	ENDDO
875
876	CALL cpu_log( log_point(14), 'data_output_3d', 'stop' )
877
878	IF ( debug_output ) THEN
879	WRITE( debug_string, * ) 'data_output_3d'
880	CALL debug_message( debug_string, 'end' )
881	ENDIF
882
883	END SUBROUTINE data_output_3d

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