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source: palm/trunk/SOURCE/data_output_3d.f90 @ 3552

Last change on this file since 3552 was 3525, checked in by kanani, 6 years ago
Changes related to clean-up of biometeorology (by dom_dwd_user)
Property svn:keywords set to `Id`
File size: 32.1 KB

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1	!> @file data_output_3d.f90
2	!------------------------------------------------------------------------------!
3	! This file is part of the PALM model system.
4	!
5	! PALM is free software: you can redistribute it and/or modify it under the
6	! terms of the GNU General Public License as published by the Free Software
7	! Foundation, either version 3 of the License, or (at your option) any later
8	! version.
9	!
10	! PALM is distributed in the hope that it will be useful, but WITHOUT ANY
11	! WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR
12	! A PARTICULAR PURPOSE. See the GNU General Public License for more details.
13	!
14	! You should have received a copy of the GNU General Public License along with
15	! PALM. If not, see <http://www.gnu.org/licenses/>.
16	!
17	! Copyright 1997-2018 Leibniz Universitaet Hannover
18	!------------------------------------------------------------------------------!
19	!
20	! Current revisions:
21	! ------------------
22	!
23	!
24	! Former revisions:
25	! -----------------
26	! $Id: data_output_3d.f90 3525 2018-11-14 16:06:14Z suehring $
27	! Changes related to clean-up of biometeorology (dom_dwd_user)
28	!
29	! 3467 2018-10-30 19:05:21Z suehring
30	! Implementation of a new aerosol module salsa.
31	!
32	! 3448 2018-10-29 18:14:31Z kanani
33	! Adjustment of biometeorology calls
34	!
35	! 3421 2018-10-24 18:39:32Z gronemeier
36	! Renamed output variables
37	!
38	! 3419 2018-10-24 17:27:31Z gronemeier
39	! bugfix: nx, ny are required in non-parallel case
40	!
41	! 3337 2018-10-12 15:17:09Z kanani
42	! (from branch resler)
43	! Add Biometeorology
44	!
45	! 3294 2018-10-01 02:37:10Z raasch
46	! changes concerning modularization of ocean option
47	!
48	! 3274 2018-09-24 15:42:55Z knoop
49	! Modularization of all bulk cloud physics code components
50	!
51	! 3241 2018-09-12 15:02:00Z raasch
52	! unused variables and format statements removed
53	!
54	! 3049 2018-05-29 13:52:36Z Giersch
55	! Error messages revised
56	!
57	! 3045 2018-05-28 07:55:41Z Giersch
58	! Error message revised
59	!
60	! 3014 2018-05-09 08:42:38Z maronga
61	! Added nzb_do and nzt_do for some modules for 3d output
62	!
63	! 3004 2018-04-27 12:33:25Z Giersch
64	! Allocation checks implemented (averaged data will be assigned to fill values
65	! if no allocation happened so far)
66	!
67	! 2967 2018-04-13 11:22:08Z raasch
68	! bugfix: missing parallel cpp-directives added
69	!
70	! 2817 2018-02-19 16:32:21Z knoop
71	! Preliminary gust module interface implemented
72	!
73	! 2766 2018-01-22 17:17:47Z kanani
74	! Removed preprocessor directive __chem
75	!
76	! 2756 2018-01-16 18:11:14Z suehring
77	! Fill values for 3D output of chemical species introduced.
78	!
79	! 2746 2018-01-15 12:06:04Z suehring
80	! Move flag plant canopy to modules
81	!
82	! 2718 2018-01-02 08:49:38Z maronga
83	! Corrected "Former revisions" section
84	!
85	! 2696 2017-12-14 17:12:51Z kanani
86	! Change in file header (GPL part)
87	! Implementation of turbulence_closure_mod (TG)
88	! Implementation of chemistry module (FK)
89	! Set fill values at topography grid points or e.g. non-natural-type surface
90	! in case of LSM output (MS)
91	!
92	! 2512 2017-10-04 08:26:59Z raasch
93	! upper bounds of 3d output changed from nx+1,ny+1 to nx,ny
94	! no output of ghost layer data
95	!
96	! 2292 2017-06-20 09:51:42Z schwenkel
97	! Implementation of new microphysic scheme: cloud_scheme = 'morrison'
98	! includes two more prognostic equations for cloud drop concentration (nc)
99	! and cloud water content (qc).
100	!
101	! 2233 2017-05-30 18:08:54Z suehring
102	!
103	! 2232 2017-05-30 17:47:52Z suehring
104	! Adjustments to new topography concept
105	!
106	! 2209 2017-04-19 09:34:46Z kanani
107	! Added plant canopy model output
108	!
109	! 2031 2016-10-21 15:11:58Z knoop
110	! renamed variable rho to rho_ocean and rho_av to rho_ocean_av
111	!
112	! 2011 2016-09-19 17:29:57Z kanani
113	! Flag urban_surface is now defined in module control_parameters,
114	! changed prefix for urban surface model output to "usm_",
115	! introduced control parameter varnamelength for LEN of trimvar.
116	!
117	! 2007 2016-08-24 15:47:17Z kanani
118	! Added support for new urban surface model (temporary modifications of
119	! SELECT CASE ( ) necessary, see variable trimvar)
120	!
121	! 2000 2016-08-20 18:09:15Z knoop
122	! Forced header and separation lines into 80 columns
123	!
124	! 1980 2016-07-29 15:51:57Z suehring
125	! Bugfix, in order to steer user-defined output, setting flag found explicitly
126	! to .F.
127	!
128	! 1976 2016-07-27 13:28:04Z maronga
129	! Output of radiation quantities is now done directly in the respective module
130	!
131	! 1972 2016-07-26 07:52:02Z maronga
132	! Output of land surface quantities is now done directly in the respective module.
133	! Unnecessary directive __parallel removed.
134	!
135	! 1960 2016-07-12 16:34:24Z suehring
136	! Scalar surface flux added
137	!
138	! 1849 2016-04-08 11:33:18Z hoffmann
139	! prr moved to arrays_3d
140	!
141	! 1822 2016-04-07 07:49:42Z hoffmann
142	! prr vertical dimensions set to nzb_do to nzt_do. Unused variables deleted.
143	!
144	! 1808 2016-04-05 19:44:00Z raasch
145	! test output removed
146	!
147	! 1783 2016-03-06 18:36:17Z raasch
148	! name change of netcdf routines and module + related changes
149	!
150	! 1745 2016-02-05 13:06:51Z gronemeier
151	! Bugfix: test if time axis limit exceeds moved to point after call of check_open
152	!
153	! 1691 2015-10-26 16:17:44Z maronga
154	! Added output of radiative heating rates for RRTMG
155	!
156	! 1682 2015-10-07 23:56:08Z knoop
157	! Code annotations made doxygen readable
158	!
159	! 1585 2015-04-30 07:05:52Z maronga
160	! Added support for RRTMG
161	!
162	! 1551 2015-03-03 14:18:16Z maronga
163	! Added suppport for land surface model and radiation model output. In the course
164	! of this action, the limits for vertical loops have been changed (from nzb and
165	! nzt+1 to nzb_do and nzt_do, respectively in order to allow soil model output).
166	! Moreover, a new vertical grid zs was introduced.
167	!
168	! 1359 2014-04-11 17:15:14Z hoffmann
169	! New particle structure integrated.
170	!
171	! 1353 2014-04-08 15:21:23Z heinze
172	! REAL constants provided with KIND-attribute
173	!
174	! 1327 2014-03-21 11:00:16Z raasch
175	! parts concerning avs output removed,
176	! -netcdf output queries
177	!
178	! 1320 2014-03-20 08:40:49Z raasch
179	! ONLY-attribute added to USE-statements,
180	! kind-parameters added to all INTEGER and REAL declaration statements,
181	! kinds are defined in new module kinds,
182	! old module precision_kind is removed,
183	! revision history before 2012 removed,
184	! comment fields (!:) to be used for variable explanations added to
185	! all variable declaration statements
186	!
187	! 1318 2014-03-17 13:35:16Z raasch
188	! barrier argument removed from cpu_log,
189	! module interfaces removed
190	!
191	! 1308 2014-03-13 14:58:42Z fricke
192	! Check, if the limit of the time dimension is exceeded for parallel output
193	! To increase the performance for parallel output, the following is done:
194	! - Update of time axis is only done by PE0
195	!
196	! 1244 2013-10-31 08:16:56Z raasch
197	! Bugfix for index bounds in case of 3d-parallel output
198	!
199	! 1115 2013-03-26 18:16:16Z hoffmann
200	! ql is calculated by calc_liquid_water_content
201	!
202	! 1106 2013-03-04 05:31:38Z raasch
203	! array_kind renamed precision_kind
204	!
205	! 1076 2012-12-05 08:30:18Z hoffmann
206	! Bugfix in output of ql
207	!
208	! 1053 2012-11-13 17:11:03Z hoffmann
209	! +nr, qr, prr, qc and averaged quantities
210	!
211	! 1036 2012-10-22 13:43:42Z raasch
212	! code put under GPL (PALM 3.9)
213	!
214	! 1031 2012-10-19 14:35:30Z raasch
215	! netCDF4 without parallel file support implemented
216	!
217	! 1007 2012-09-19 14:30:36Z franke
218	! Bugfix: missing calculation of ql_vp added
219	!
220	! Revision 1.1 1997/09/03 06:29:36 raasch
221	! Initial revision
222	!
223	!
224	! Description:
225	! ------------
226	!> Output of the 3D-arrays in netCDF and/or AVS format.
227	!------------------------------------------------------------------------------!
228	SUBROUTINE data_output_3d( av )
229
230
231	USE arrays_3d, &
232	ONLY: d_exner, e, nc, nr, p, pt, prr, q, qc, ql, ql_c, ql_v, qr, s, &
233	tend, u, v, vpt, w
234
235	USE averaging
236
237	USE basic_constants_and_equations_mod, &
238	ONLY: lv_d_cp
239
240	USE biometeorology_mod, &
241	ONLY: bio_data_output_3d
242
243	USE bulk_cloud_model_mod, &
244	ONLY: bulk_cloud_model, bcm_data_output_3d
245
246	USE chemistry_model_mod, &
247	ONLY: chem_data_output_3d
248
249	USE control_parameters, &
250	ONLY: air_chemistry, biometeorology, do3d, do3d_no, do3d_time_count, &
251	io_blocks, io_group, land_surface, message_string, &
252	ntdim_3d, nz_do3d, ocean_mode, plant_canopy, &
253	psolver, simulated_time, time_since_reference_point, &
254	urban_surface, varnamelength
255
256	USE cpulog, &
257	ONLY: log_point, cpu_log
258
259	USE gust_mod, &
260	ONLY: gust_data_output_3d, gust_module_enabled
261
262	#if defined( __parallel )
263	USE indices, &
264	ONLY: nbgp, nxl, nxlg, nxr, nxrg, nyn, nyng, nys, nysg, nzb, nzt, &
265	wall_flags_0
266	#else
267	USE indices, &
268	ONLY: nbgp, nx, nxl, nxlg, nxr, nxrg, ny, nyn, nyng, nys, nysg, nzb, &
269	nzt, wall_flags_0
270	#endif
271
272	USE kinds
273
274	USE land_surface_model_mod, &
275	ONLY: lsm_data_output_3d, nzb_soil, nzt_soil
276
277	#if defined( __netcdf )
278	USE NETCDF
279	#endif
280
281	USE netcdf_interface, &
282	ONLY: fill_value, id_set_3d, id_var_do3d, id_var_time_3d, nc_stat, &
283	netcdf_data_format, netcdf_handle_error
284
285	USE ocean_mod, &
286	ONLY: ocean_data_output_3d
287
288	USE particle_attributes, &
289	ONLY: grid_particles, number_of_particles, particles, &
290	particle_advection_start, prt_count
291
292	USE pegrid
293
294	USE plant_canopy_model_mod, &
295	ONLY: pcm_data_output_3d
296
297	USE radiation_model_mod, &
298	ONLY: nzub, nzut, radiation, radiation_data_output_3d
299
300	USE salsa_mod, &
301	ONLY: salsa, salsa_data_output_3d
302
303	USE turbulence_closure_mod, &
304	ONLY: tcm_data_output_3d
305
306	USE urban_surface_mod, &
307	ONLY: usm_data_output_3d
308
309
310	IMPLICIT NONE
311
312	INTEGER(iwp) :: av !<
313	INTEGER(iwp) :: flag_nr !< number of masking flag
314	INTEGER(iwp) :: i !<
315	INTEGER(iwp) :: if !<
316	INTEGER(iwp) :: j !<
317	INTEGER(iwp) :: k !<
318	INTEGER(iwp) :: n !<
319	INTEGER(iwp) :: nzb_do !< vertical lower limit for data output
320	INTEGER(iwp) :: nzt_do !< vertical upper limit for data output
321
322	LOGICAL :: found !<
323	LOGICAL :: resorted !<
324
325	REAL(wp) :: mean_r !<
326	REAL(wp) :: s_r2 !<
327	REAL(wp) :: s_r3 !<
328
329	REAL(sp), DIMENSION(:,:,:), ALLOCATABLE :: local_pf !<
330
331	REAL(wp), DIMENSION(:,:,:), POINTER :: to_be_resorted !<
332
333	CHARACTER (LEN=varnamelength) :: trimvar !< TRIM of output-variable string
334
335	!
336	!-- Return, if nothing to output
337	IF ( do3d_no(av) == 0 ) RETURN
338
339	CALL cpu_log (log_point(14),'data_output_3d','start')
340
341	!
342	!-- Open output file.
343	!-- For classic or 64bit netCDF output on more than one PE, each PE opens its
344	!-- own file and writes the data of its subdomain in binary format. After the
345	!-- run, these files are combined to one NetCDF file by combine_plot_fields.
346	!-- For netCDF4/HDF5 output, data is written in parallel into one file.
347	IF ( netcdf_data_format < 5 ) THEN
348	#if defined( __parallel )
349	CALL check_open( 30 )
350	#endif
351	IF ( myid == 0 ) CALL check_open( 106+av*10 )
352	ELSE
353	CALL check_open( 106+av*10 )
354	ENDIF
355
356	!
357	!-- For parallel netcdf output the time axis must be limited. Return, if this
358	!-- limit is exceeded. This could be the case, if the simulated time exceeds
359	!-- the given end time by the length of the given output interval.
360	IF ( netcdf_data_format > 4 ) THEN
361	IF ( do3d_time_count(av) + 1 > ntdim_3d(av) ) THEN
362	WRITE ( message_string, * ) 'Output of 3d data is not given at t=', &
363	simulated_time, '&because the maximum ', &
364	'number of output time levels is ', &
365	'exceeded.'
366	CALL message( 'data_output_3d', 'PA0387', 0, 1, 0, 6, 0 )
367	CALL cpu_log( log_point(14), 'data_output_3d', 'stop' )
368	RETURN
369	ENDIF
370	ENDIF
371
372	!
373	!-- Update the netCDF time axis
374	!-- In case of parallel output, this is only done by PE0 to increase the
375	!-- performance.
376	#if defined( __netcdf )
377	do3d_time_count(av) = do3d_time_count(av) + 1
378	IF ( myid == 0 ) THEN
379	nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_time_3d(av), &
380	(/ time_since_reference_point /), &
381	start = (/ do3d_time_count(av) /), &
382	count = (/ 1 /) )
383	CALL netcdf_handle_error( 'data_output_3d', 376 )
384	ENDIF
385	#endif
386
387	!
388	!-- Loop over all variables to be written.
389	if = 1
390
391	DO WHILE ( do3d(av,if)(1:1) /= ' ' )
392
393	!
394	!-- Temporary solution to account for data output within the new urban
395	!-- surface model (urban_surface_mod.f90), see also SELECT CASE ( trimvar ).
396	!-- Store the array chosen on the temporary array.
397	trimvar = TRIM( do3d(av,if) )
398	IF ( urban_surface .AND. trimvar(1:4) == 'usm_' ) THEN
399	trimvar = 'usm_output'
400	resorted = .TRUE.
401	nzb_do = nzub
402	nzt_do = nzut
403	ELSE
404	resorted = .FALSE.
405	nzb_do = nzb
406	nzt_do = nz_do3d
407	ENDIF
408	!
409	!-- Set flag to steer output of radiation, land-surface, or user-defined
410	!-- quantities
411	found = .FALSE.
412	!
413	!-- Allocate a temporary array with the desired output dimensions.
414	ALLOCATE( local_pf(nxl:nxr,nys:nyn,nzb_do:nzt_do) )
415	!
416	!-- Before each output, set array local_pf to fill value
417	local_pf = fill_value
418	!
419	!-- Set masking flag for topography for not resorted arrays
420	flag_nr = 0
421
422	SELECT CASE ( trimvar )
423
424	CASE ( 'e' )
425	IF ( av == 0 ) THEN
426	to_be_resorted => e
427	ELSE
428	IF ( .NOT. ALLOCATED( e_av ) ) THEN
429	ALLOCATE( e_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
430	e_av = REAL( fill_value, KIND = wp )
431	ENDIF
432	to_be_resorted => e_av
433	ENDIF
434
435	CASE ( 'thetal' )
436	IF ( av == 0 ) THEN
437	to_be_resorted => pt
438	ELSE
439	IF ( .NOT. ALLOCATED( lpt_av ) ) THEN
440	ALLOCATE( lpt_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
441	lpt_av = REAL( fill_value, KIND = wp )
442	ENDIF
443	to_be_resorted => lpt_av
444	ENDIF
445
446	CASE ( 'p' )
447	IF ( av == 0 ) THEN
448	IF ( psolver /= 'sor' ) CALL exchange_horiz( p, nbgp )
449	to_be_resorted => p
450	ELSE
451	IF ( .NOT. ALLOCATED( p_av ) ) THEN
452	ALLOCATE( p_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
453	p_av = REAL( fill_value, KIND = wp )
454	ENDIF
455	IF ( psolver /= 'sor' ) CALL exchange_horiz( p_av, nbgp )
456	to_be_resorted => p_av
457	ENDIF
458
459	CASE ( 'pc' ) ! particle concentration (requires ghostpoint exchange)
460	IF ( av == 0 ) THEN
461	IF ( simulated_time >= particle_advection_start ) THEN
462	tend = prt_count
463	ELSE
464	tend = 0.0_wp
465	ENDIF
466	DO i = nxl, nxr
467	DO j = nys, nyn
468	DO k = nzb_do, nzt_do
469	local_pf(i,j,k) = tend(k,j,i)
470	ENDDO
471	ENDDO
472	ENDDO
473	resorted = .TRUE.
474	ELSE
475	IF ( .NOT. ALLOCATED( pc_av ) ) THEN
476	ALLOCATE( pc_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
477	pc_av = REAL( fill_value, KIND = wp )
478	ENDIF
479	to_be_resorted => pc_av
480	ENDIF
481
482	CASE ( 'pr' ) ! mean particle radius (effective radius)
483	IF ( av == 0 ) THEN
484	IF ( simulated_time >= particle_advection_start ) THEN
485	DO i = nxl, nxr
486	DO j = nys, nyn
487	DO k = nzb_do, nzt_do
488	number_of_particles = prt_count(k,j,i)
489	IF (number_of_particles <= 0) CYCLE
490	particles => grid_particles(k,j,i)%particles(1:number_of_particles)
491	s_r2 = 0.0_wp
492	s_r3 = 0.0_wp
493	DO n = 1, number_of_particles
494	IF ( particles(n)%particle_mask ) THEN
495	s_r2 = s_r2 + particles(n)%radius*2 &
496	particles(n)%weight_factor
497	s_r3 = s_r3 + particles(n)%radius*3 &
498	particles(n)%weight_factor
499	ENDIF
500	ENDDO
501	IF ( s_r2 > 0.0_wp ) THEN
502	mean_r = s_r3 / s_r2
503	ELSE
504	mean_r = 0.0_wp
505	ENDIF
506	tend(k,j,i) = mean_r
507	ENDDO
508	ENDDO
509	ENDDO
510	ELSE
511	tend = 0.0_wp
512	ENDIF
513	DO i = nxl, nxr
514	DO j = nys, nyn
515	DO k = nzb_do, nzt_do
516	local_pf(i,j,k) = tend(k,j,i)
517	ENDDO
518	ENDDO
519	ENDDO
520	resorted = .TRUE.
521	ELSE
522	IF ( .NOT. ALLOCATED( pr_av ) ) THEN
523	ALLOCATE( pr_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
524	pr_av = REAL( fill_value, KIND = wp )
525	ENDIF
526	to_be_resorted => pr_av
527	ENDIF
528
529	CASE ( 'theta' )
530	IF ( av == 0 ) THEN
531	IF ( .NOT. bulk_cloud_model ) THEN
532	to_be_resorted => pt
533	ELSE
534	DO i = nxl, nxr
535	DO j = nys, nyn
536	DO k = nzb_do, nzt_do
537	local_pf(i,j,k) = pt(k,j,i) + lv_d_cp * &
538	d_exner(k) * &
539	ql(k,j,i)
540	ENDDO
541	ENDDO
542	ENDDO
543	resorted = .TRUE.
544	ENDIF
545	ELSE
546	IF ( .NOT. ALLOCATED( pt_av ) ) THEN
547	ALLOCATE( pt_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
548	pt_av = REAL( fill_value, KIND = wp )
549	ENDIF
550	to_be_resorted => pt_av
551	ENDIF
552
553	CASE ( 'q' )
554	IF ( av == 0 ) THEN
555	to_be_resorted => q
556	ELSE
557	IF ( .NOT. ALLOCATED( q_av ) ) THEN
558	ALLOCATE( q_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
559	q_av = REAL( fill_value, KIND = wp )
560	ENDIF
561	to_be_resorted => q_av
562	ENDIF
563
564	CASE ( 'ql' )
565	IF ( av == 0 ) THEN
566	to_be_resorted => ql
567	ELSE
568	IF ( .NOT. ALLOCATED( ql_av ) ) THEN
569	ALLOCATE( ql_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
570	ql_av = REAL( fill_value, KIND = wp )
571	ENDIF
572	to_be_resorted => ql_av
573	ENDIF
574
575	CASE ( 'ql_c' )
576	IF ( av == 0 ) THEN
577	to_be_resorted => ql_c
578	ELSE
579	IF ( .NOT. ALLOCATED( ql_c_av ) ) THEN
580	ALLOCATE( ql_c_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
581	ql_c_av = REAL( fill_value, KIND = wp )
582	ENDIF
583	to_be_resorted => ql_c_av
584	ENDIF
585
586	CASE ( 'ql_v' )
587	IF ( av == 0 ) THEN
588	to_be_resorted => ql_v
589	ELSE
590	IF ( .NOT. ALLOCATED( ql_v_av ) ) THEN
591	ALLOCATE( ql_v_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
592	ql_v_av = REAL( fill_value, KIND = wp )
593	ENDIF
594	to_be_resorted => ql_v_av
595	ENDIF
596
597	CASE ( 'ql_vp' )
598	IF ( av == 0 ) THEN
599	IF ( simulated_time >= particle_advection_start ) THEN
600	DO i = nxl, nxr
601	DO j = nys, nyn
602	DO k = nzb_do, nzt_do
603	number_of_particles = prt_count(k,j,i)
604	IF (number_of_particles <= 0) CYCLE
605	particles => grid_particles(k,j,i)%particles(1:number_of_particles)
606	DO n = 1, number_of_particles
607	IF ( particles(n)%particle_mask ) THEN
608	tend(k,j,i) = tend(k,j,i) + &
609	particles(n)%weight_factor / &
610	prt_count(k,j,i)
611	ENDIF
612	ENDDO
613	ENDDO
614	ENDDO
615	ENDDO
616	ELSE
617	tend = 0.0_wp
618	ENDIF
619	DO i = nxl, nxr
620	DO j = nys, nyn
621	DO k = nzb_do, nzt_do
622	local_pf(i,j,k) = tend(k,j,i)
623	ENDDO
624	ENDDO
625	ENDDO
626	resorted = .TRUE.
627	ELSE
628	IF ( .NOT. ALLOCATED( ql_vp_av ) ) THEN
629	ALLOCATE( ql_vp_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
630	ql_vp_av = REAL( fill_value, KIND = wp )
631	ENDIF
632	to_be_resorted => ql_vp_av
633	ENDIF
634
635	CASE ( 'qv' )
636	IF ( av == 0 ) THEN
637	DO i = nxl, nxr
638	DO j = nys, nyn
639	DO k = nzb_do, nzt_do
640	local_pf(i,j,k) = q(k,j,i) - ql(k,j,i)
641	ENDDO
642	ENDDO
643	ENDDO
644	resorted = .TRUE.
645	ELSE
646	IF ( .NOT. ALLOCATED( qv_av ) ) THEN
647	ALLOCATE( qv_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
648	qv_av = REAL( fill_value, KIND = wp )
649	ENDIF
650	to_be_resorted => qv_av
651	ENDIF
652
653	CASE ( 's' )
654	IF ( av == 0 ) THEN
655	to_be_resorted => s
656	ELSE
657	IF ( .NOT. ALLOCATED( s_av ) ) THEN
658	ALLOCATE( s_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
659	s_av = REAL( fill_value, KIND = wp )
660	ENDIF
661	to_be_resorted => s_av
662	ENDIF
663
664	CASE ( 'u' )
665	flag_nr = 1
666	IF ( av == 0 ) THEN
667	to_be_resorted => u
668	ELSE
669	IF ( .NOT. ALLOCATED( u_av ) ) THEN
670	ALLOCATE( u_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
671	u_av = REAL( fill_value, KIND = wp )
672	ENDIF
673	to_be_resorted => u_av
674	ENDIF
675
676	CASE ( 'v' )
677	flag_nr = 2
678	IF ( av == 0 ) THEN
679	to_be_resorted => v
680	ELSE
681	IF ( .NOT. ALLOCATED( v_av ) ) THEN
682	ALLOCATE( v_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
683	v_av = REAL( fill_value, KIND = wp )
684	ENDIF
685	to_be_resorted => v_av
686	ENDIF
687
688	CASE ( 'thetav' )
689	IF ( av == 0 ) THEN
690	to_be_resorted => vpt
691	ELSE
692	IF ( .NOT. ALLOCATED( vpt_av ) ) THEN
693	ALLOCATE( vpt_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
694	vpt_av = REAL( fill_value, KIND = wp )
695	ENDIF
696	to_be_resorted => vpt_av
697	ENDIF
698
699	CASE ( 'w' )
700	flag_nr = 3
701	IF ( av == 0 ) THEN
702	to_be_resorted => w
703	ELSE
704	IF ( .NOT. ALLOCATED( w_av ) ) THEN
705	ALLOCATE( w_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
706	w_av = REAL( fill_value, KIND = wp )
707	ENDIF
708	to_be_resorted => w_av
709	ENDIF
710	!
711	!-- Block of urban surface model outputs
712	CASE ( 'usm_output' )
713	CALL usm_data_output_3d( av, do3d(av,if), found, local_pf, &
714	nzb_do, nzt_do )
715
716	CASE DEFAULT
717
718	!
719	!-- Quantities of other modules
720	IF ( .NOT. found .AND. bulk_cloud_model ) THEN
721	CALL bcm_data_output_3d( av, do3d(av,if), found, local_pf, &
722	nzb_do, nzt_do )
723	resorted = .TRUE.
724	ENDIF
725
726	IF ( .NOT. found .AND. air_chemistry ) THEN
727	CALL chem_data_output_3d( av, do3d(av,if), found, &
728	local_pf, fill_value, nzb_do, nzt_do )
729	resorted = .TRUE.
730	ENDIF
731
732	IF ( .NOT. found .AND. gust_module_enabled ) THEN
733	CALL gust_data_output_3d( av, do3d(av,if), found, local_pf, &
734	nzb_do, nzt_do )
735	resorted = .TRUE.
736	ENDIF
737
738	IF ( .NOT. found .AND. land_surface ) THEN
739	!
740	!-- For soil model quantities, it is required to re-allocate local_pf
741	nzb_do = nzb_soil
742	nzt_do = nzt_soil
743
744	DEALLOCATE ( local_pf )
745	ALLOCATE( local_pf(nxl:nxr,nys:nyn,nzb_do:nzt_do) )
746	local_pf = fill_value
747
748	CALL lsm_data_output_3d( av, do3d(av,if), found, local_pf )
749	resorted = .TRUE.
750
751	!
752	!-- If no soil model variable was found, re-allocate local_pf
753	IF ( .NOT. found ) THEN
754	nzb_do = nzb
755	nzt_do = nz_do3d
756
757	DEALLOCATE ( local_pf )
758	ALLOCATE( local_pf(nxl:nxr,nys:nyn,nzb_do:nzt_do) )
759	ENDIF
760
761	ENDIF
762
763	IF ( .NOT. found .AND. ocean_mode ) THEN
764	CALL ocean_data_output_3d( av, do3d(av,if), found, local_pf, &
765	nzb_do, nzt_do )
766	resorted = .TRUE.
767	ENDIF
768
769	IF ( .NOT. found .AND. plant_canopy ) THEN
770	CALL pcm_data_output_3d( av, do3d(av,if), found, local_pf, &
771	fill_value, nzb_do, nzt_do )
772	resorted = .TRUE.
773	ENDIF
774
775	IF ( .NOT. found .AND. radiation ) THEN
776	CALL radiation_data_output_3d( av, do3d(av,if), found, &
777	local_pf, nzb_do, nzt_do )
778	resorted = .TRUE.
779	ENDIF
780
781	IF ( .NOT. found ) THEN
782	CALL tcm_data_output_3d( av, do3d(av,if), found, local_pf, &
783	nzb_do, nzt_do )
784	resorted = .TRUE.
785	ENDIF
786
787	!
788	!-- SALSA output
789	IF ( .NOT. found .AND. salsa ) THEN
790	CALL salsa_data_output_3d( av, do3d(av,if), found, local_pf )
791	resorted = .TRUE.
792	ENDIF
793
794	IF ( .NOT. found .AND. biometeorology ) THEN
795	CALL bio_data_output_3d( av, do3d(av,if), found, local_pf, &
796	nzb_do, nzt_do )
797	ENDIF
798
799	!
800	!-- User defined quantities
801	IF ( .NOT. found ) THEN
802	CALL user_data_output_3d( av, do3d(av,if), found, local_pf, &
803	nzb_do, nzt_do )
804	resorted = .TRUE.
805	ENDIF
806
807	IF ( .NOT. found ) THEN
808	message_string = 'no output available for: ' // &
809	TRIM( do3d(av,if) )
810	CALL message( 'data_output_3d', 'PA0182', 0, 0, 0, 6, 0 )
811	ENDIF
812
813	END SELECT
814
815	!
816	!-- Resort the array to be output, if not done above
817	IF ( .NOT. resorted ) THEN
818	DO i = nxl, nxr
819	DO j = nys, nyn
820	DO k = nzb_do, nzt_do
821	local_pf(i,j,k) = MERGE( &
822	to_be_resorted(k,j,i), &
823	REAL( fill_value, KIND = wp ), &
824	BTEST( wall_flags_0(k,j,i), flag_nr ) )
825	ENDDO
826	ENDDO
827	ENDDO
828	ENDIF
829
830	!
831	!-- Output of the 3D-array
832	#if defined( __parallel )
833	IF ( netcdf_data_format < 5 ) THEN
834	!
835	!-- Non-parallel netCDF output. Data is output in parallel in
836	!-- FORTRAN binary format here, and later collected into one file by
837	!-- combine_plot_fields
838	IF ( myid == 0 ) THEN
839	WRITE ( 30 ) time_since_reference_point, &
840	do3d_time_count(av), av
841	ENDIF
842	DO i = 0, io_blocks-1
843	IF ( i == io_group ) THEN
844	WRITE ( 30 ) nxl, nxr, nys, nyn, nzb_do, nzt_do
845	WRITE ( 30 ) local_pf(:,:,nzb_do:nzt_do)
846	ENDIF
847
848	CALL MPI_BARRIER( comm2d, ierr )
849
850	ENDDO
851
852	ELSE
853	#if defined( __netcdf )
854	!
855	!-- Parallel output in netCDF4/HDF5 format.
856	! IF ( nxr == nx .AND. nyn /= ny ) THEN
857	! nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,if), &
858	! local_pf(nxl:nxr+1,nys:nyn,nzb_do:nzt_do), &
859	! start = (/ nxl+1, nys+1, nzb_do+1, do3d_time_count(av) /), &
860	! count = (/ nxr-nxl+2, nyn-nys+1, nzt_do-nzb_do+1, 1 /) )
861	! ELSEIF ( nxr /= nx .AND. nyn == ny ) THEN
862	! nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,if), &
863	! local_pf(nxl:nxr,nys:nyn+1,nzb_do:nzt_do), &
864	! start = (/ nxl+1, nys+1, nzb_do+1, do3d_time_count(av) /), &
865	! count = (/ nxr-nxl+1, nyn-nys+2, nzt_do-nzb_do+1, 1 /) )
866	! ELSEIF ( nxr == nx .AND. nyn == ny ) THEN
867	! nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,if), &
868	! local_pf(nxl:nxr+1,nys:nyn+1,nzb_do:nzt_do ), &
869	! start = (/ nxl+1, nys+1, nzb_do+1, do3d_time_count(av) /), &
870	! count = (/ nxr-nxl+2, nyn-nys+2, nzt_do-nzb_do+1, 1 /) )
871	! ELSE
872	nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,if), &
873	local_pf(nxl:nxr,nys:nyn,nzb_do:nzt_do), &
874	start = (/ nxl+1, nys+1, nzb_do+1, do3d_time_count(av) /), &
875	count = (/ nxr-nxl+1, nyn-nys+1, nzt_do-nzb_do+1, 1 /) )
876	! ENDIF
877	CALL netcdf_handle_error( 'data_output_3d', 386 )
878	#endif
879	ENDIF
880	#else
881	#if defined( __netcdf )
882	nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,if), &
883	local_pf(nxl:nxr+1,nys:nyn+1,nzb_do:nzt_do), &
884	start = (/ 1, 1, 1, do3d_time_count(av) /), &
885	count = (/ nx+1, ny+1, nzt_do-nzb_do+1, 1 /) )
886	CALL netcdf_handle_error( 'data_output_3d', 446 )
887	#endif
888	#endif
889
890	if = if + 1
891
892	!
893	!-- Deallocate temporary array
894	DEALLOCATE ( local_pf )
895
896	ENDDO
897
898	CALL cpu_log( log_point(14), 'data_output_3d', 'stop' )
899
900	END SUBROUTINE data_output_3d

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