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source: palm/trunk/SOURCE/data_output_3d.f90 @ 3274

Last change on this file since 3274 was 3274, checked in by knoop, 6 years ago
Modularization of all bulk cloud physics code components
Property svn:keywords set to `Id`
File size: 31.2 KB

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1	!> @file data_output_3d.f90
2	!------------------------------------------------------------------------------!
3	! This file is part of the PALM model system.
4	!
5	! PALM is free software: you can redistribute it and/or modify it under the
6	! terms of the GNU General Public License as published by the Free Software
7	! Foundation, either version 3 of the License, or (at your option) any later
8	! version.
9	!
10	! PALM is distributed in the hope that it will be useful, but WITHOUT ANY
11	! WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR
12	! A PARTICULAR PURPOSE. See the GNU General Public License for more details.
13	!
14	! You should have received a copy of the GNU General Public License along with
15	! PALM. If not, see <http://www.gnu.org/licenses/>.
16	!
17	! Copyright 1997-2018 Leibniz Universitaet Hannover
18	!------------------------------------------------------------------------------!
19	!
20	! Current revisions:
21	! ------------------
22	!
23	!
24	! Former revisions:
25	! -----------------
26	! $Id: data_output_3d.f90 3274 2018-09-24 15:42:55Z knoop $
27	! Modularization of all bulk cloud physics code components
28	!
29	! 3241 2018-09-12 15:02:00Z raasch
30	! unused variables and format statements removed
31	!
32	! 3049 2018-05-29 13:52:36Z Giersch
33	! Error messages revised
34	!
35	! 3045 2018-05-28 07:55:41Z Giersch
36	! Error message revised
37	!
38	! 3014 2018-05-09 08:42:38Z maronga
39	! Added nzb_do and nzt_do for some modules for 3d output
40	!
41	! 3004 2018-04-27 12:33:25Z Giersch
42	! Allocation checks implemented (averaged data will be assigned to fill values
43	! if no allocation happened so far)
44	!
45	! 2967 2018-04-13 11:22:08Z raasch
46	! bugfix: missing parallel cpp-directives added
47	!
48	! 2817 2018-02-19 16:32:21Z knoop
49	! Preliminary gust module interface implemented
50	!
51	! 2766 2018-01-22 17:17:47Z kanani
52	! Removed preprocessor directive __chem
53	!
54	! 2756 2018-01-16 18:11:14Z suehring
55	! Fill values for 3D output of chemical species introduced.
56	!
57	! 2746 2018-01-15 12:06:04Z suehring
58	! Move flag plant canopy to modules
59	!
60	! 2718 2018-01-02 08:49:38Z maronga
61	! Corrected "Former revisions" section
62	!
63	! 2696 2017-12-14 17:12:51Z kanani
64	! Change in file header (GPL part)
65	! Implementation of turbulence_closure_mod (TG)
66	! Implementation of chemistry module (FK)
67	! Set fill values at topography grid points or e.g. non-natural-type surface
68	! in case of LSM output (MS)
69	!
70	! 2512 2017-10-04 08:26:59Z raasch
71	! upper bounds of 3d output changed from nx+1,ny+1 to nx,ny
72	! no output of ghost layer data
73	!
74	! 2292 2017-06-20 09:51:42Z schwenkel
75	! Implementation of new microphysic scheme: cloud_scheme = 'morrison'
76	! includes two more prognostic equations for cloud drop concentration (nc)
77	! and cloud water content (qc).
78	!
79	! 2233 2017-05-30 18:08:54Z suehring
80	!
81	! 2232 2017-05-30 17:47:52Z suehring
82	! Adjustments to new topography concept
83	!
84	! 2209 2017-04-19 09:34:46Z kanani
85	! Added plant canopy model output
86	!
87	! 2031 2016-10-21 15:11:58Z knoop
88	! renamed variable rho to rho_ocean and rho_av to rho_ocean_av
89	!
90	! 2011 2016-09-19 17:29:57Z kanani
91	! Flag urban_surface is now defined in module control_parameters,
92	! changed prefix for urban surface model output to "usm_",
93	! introduced control parameter varnamelength for LEN of trimvar.
94	!
95	! 2007 2016-08-24 15:47:17Z kanani
96	! Added support for new urban surface model (temporary modifications of
97	! SELECT CASE ( ) necessary, see variable trimvar)
98	!
99	! 2000 2016-08-20 18:09:15Z knoop
100	! Forced header and separation lines into 80 columns
101	!
102	! 1980 2016-07-29 15:51:57Z suehring
103	! Bugfix, in order to steer user-defined output, setting flag found explicitly
104	! to .F.
105	!
106	! 1976 2016-07-27 13:28:04Z maronga
107	! Output of radiation quantities is now done directly in the respective module
108	!
109	! 1972 2016-07-26 07:52:02Z maronga
110	! Output of land surface quantities is now done directly in the respective module.
111	! Unnecessary directive __parallel removed.
112	!
113	! 1960 2016-07-12 16:34:24Z suehring
114	! Scalar surface flux added
115	!
116	! 1849 2016-04-08 11:33:18Z hoffmann
117	! prr moved to arrays_3d
118	!
119	! 1822 2016-04-07 07:49:42Z hoffmann
120	! prr vertical dimensions set to nzb_do to nzt_do. Unused variables deleted.
121	!
122	! 1808 2016-04-05 19:44:00Z raasch
123	! test output removed
124	!
125	! 1783 2016-03-06 18:36:17Z raasch
126	! name change of netcdf routines and module + related changes
127	!
128	! 1745 2016-02-05 13:06:51Z gronemeier
129	! Bugfix: test if time axis limit exceeds moved to point after call of check_open
130	!
131	! 1691 2015-10-26 16:17:44Z maronga
132	! Added output of radiative heating rates for RRTMG
133	!
134	! 1682 2015-10-07 23:56:08Z knoop
135	! Code annotations made doxygen readable
136	!
137	! 1585 2015-04-30 07:05:52Z maronga
138	! Added support for RRTMG
139	!
140	! 1551 2015-03-03 14:18:16Z maronga
141	! Added suppport for land surface model and radiation model output. In the course
142	! of this action, the limits for vertical loops have been changed (from nzb and
143	! nzt+1 to nzb_do and nzt_do, respectively in order to allow soil model output).
144	! Moreover, a new vertical grid zs was introduced.
145	!
146	! 1359 2014-04-11 17:15:14Z hoffmann
147	! New particle structure integrated.
148	!
149	! 1353 2014-04-08 15:21:23Z heinze
150	! REAL constants provided with KIND-attribute
151	!
152	! 1327 2014-03-21 11:00:16Z raasch
153	! parts concerning avs output removed,
154	! -netcdf output queries
155	!
156	! 1320 2014-03-20 08:40:49Z raasch
157	! ONLY-attribute added to USE-statements,
158	! kind-parameters added to all INTEGER and REAL declaration statements,
159	! kinds are defined in new module kinds,
160	! old module precision_kind is removed,
161	! revision history before 2012 removed,
162	! comment fields (!:) to be used for variable explanations added to
163	! all variable declaration statements
164	!
165	! 1318 2014-03-17 13:35:16Z raasch
166	! barrier argument removed from cpu_log,
167	! module interfaces removed
168	!
169	! 1308 2014-03-13 14:58:42Z fricke
170	! Check, if the limit of the time dimension is exceeded for parallel output
171	! To increase the performance for parallel output, the following is done:
172	! - Update of time axis is only done by PE0
173	!
174	! 1244 2013-10-31 08:16:56Z raasch
175	! Bugfix for index bounds in case of 3d-parallel output
176	!
177	! 1115 2013-03-26 18:16:16Z hoffmann
178	! ql is calculated by calc_liquid_water_content
179	!
180	! 1106 2013-03-04 05:31:38Z raasch
181	! array_kind renamed precision_kind
182	!
183	! 1076 2012-12-05 08:30:18Z hoffmann
184	! Bugfix in output of ql
185	!
186	! 1053 2012-11-13 17:11:03Z hoffmann
187	! +nr, qr, prr, qc and averaged quantities
188	!
189	! 1036 2012-10-22 13:43:42Z raasch
190	! code put under GPL (PALM 3.9)
191	!
192	! 1031 2012-10-19 14:35:30Z raasch
193	! netCDF4 without parallel file support implemented
194	!
195	! 1007 2012-09-19 14:30:36Z franke
196	! Bugfix: missing calculation of ql_vp added
197	!
198	! Revision 1.1 1997/09/03 06:29:36 raasch
199	! Initial revision
200	!
201	!
202	! Description:
203	! ------------
204	!> Output of the 3D-arrays in netCDF and/or AVS format.
205	!------------------------------------------------------------------------------!
206	SUBROUTINE data_output_3d( av )
207
208
209	USE arrays_3d, &
210	ONLY: e, nc, nr, p, pt, prr, q, qc, ql, ql_c, ql_v, qr, rho_ocean, s, &
211	sa, tend, u, v, vpt, w, d_exner
212
213	USE averaging
214
215	USE basic_constants_and_equations_mod, &
216	ONLY: lv_d_cp
217
218	USE bulk_cloud_model_mod, &
219	ONLY: bulk_cloud_model, bcm_data_output_3d
220
221	USE chemistry_model_mod, &
222	ONLY: chem_data_output_3d
223
224	USE control_parameters, &
225	ONLY: air_chemistry, do3d, do3d_no, do3d_time_count, &
226	io_blocks, io_group, land_surface, message_string, &
227	ntdim_3d, nz_do3d, plant_canopy, &
228	psolver, simulated_time, time_since_reference_point, &
229	urban_surface, varnamelength
230
231	USE cpulog, &
232	ONLY: log_point, cpu_log
233
234	USE gust_mod, &
235	ONLY: gust_data_output_3d, gust_module_enabled
236
237	USE indices, &
238	ONLY: nbgp, nxl, nxlg, nxr, nxrg, nyn, nyng, nys, nysg, nzb, nzt, &
239	wall_flags_0
240
241	USE kinds
242
243	USE land_surface_model_mod, &
244	ONLY: lsm_data_output_3d, nzb_soil, nzt_soil
245
246	#if defined( __netcdf )
247	USE NETCDF
248	#endif
249
250	USE netcdf_interface, &
251	ONLY: fill_value, id_set_3d, id_var_do3d, id_var_time_3d, nc_stat, &
252	netcdf_data_format, netcdf_handle_error
253
254	USE particle_attributes, &
255	ONLY: grid_particles, number_of_particles, particles, &
256	particle_advection_start, prt_count
257
258	USE pegrid
259
260	USE plant_canopy_model_mod, &
261	ONLY: pcm_data_output_3d
262
263	USE radiation_model_mod, &
264	ONLY: nzub, nzut, radiation, radiation_data_output_3d
265
266	USE turbulence_closure_mod, &
267	ONLY: tcm_data_output_3d
268
269	USE urban_surface_mod, &
270	ONLY: usm_data_output_3d
271
272
273	IMPLICIT NONE
274
275	INTEGER(iwp) :: av !<
276	INTEGER(iwp) :: flag_nr !< number of masking flag
277	INTEGER(iwp) :: i !<
278	INTEGER(iwp) :: if !<
279	INTEGER(iwp) :: j !<
280	INTEGER(iwp) :: k !<
281	INTEGER(iwp) :: n !<
282	INTEGER(iwp) :: nzb_do !< vertical lower limit for data output
283	INTEGER(iwp) :: nzt_do !< vertical upper limit for data output
284
285	LOGICAL :: found !<
286	LOGICAL :: resorted !<
287
288	REAL(wp) :: mean_r !<
289	REAL(wp) :: s_r2 !<
290	REAL(wp) :: s_r3 !<
291
292	REAL(sp), DIMENSION(:,:,:), ALLOCATABLE :: local_pf !<
293
294	REAL(wp), DIMENSION(:,:,:), POINTER :: to_be_resorted !<
295
296	CHARACTER (LEN=varnamelength) :: trimvar !< TRIM of output-variable string
297
298	!
299	!-- Return, if nothing to output
300	IF ( do3d_no(av) == 0 ) RETURN
301
302	CALL cpu_log (log_point(14),'data_output_3d','start')
303
304	!
305	!-- Open output file.
306	!-- For classic or 64bit netCDF output on more than one PE, each PE opens its
307	!-- own file and writes the data of its subdomain in binary format. After the
308	!-- run, these files are combined to one NetCDF file by combine_plot_fields.
309	!-- For netCDF4/HDF5 output, data is written in parallel into one file.
310	IF ( netcdf_data_format < 5 ) THEN
311	#if defined( __parallel )
312	CALL check_open( 30 )
313	#endif
314	IF ( myid == 0 ) CALL check_open( 106+av*10 )
315	ELSE
316	CALL check_open( 106+av*10 )
317	ENDIF
318
319	!
320	!-- For parallel netcdf output the time axis must be limited. Return, if this
321	!-- limit is exceeded. This could be the case, if the simulated time exceeds
322	!-- the given end time by the length of the given output interval.
323	IF ( netcdf_data_format > 4 ) THEN
324	IF ( do3d_time_count(av) + 1 > ntdim_3d(av) ) THEN
325	WRITE ( message_string, * ) 'Output of 3d data is not given at t=', &
326	simulated_time, '&because the maximum ', &
327	'number of output time levels is ', &
328	'exceeded.'
329	CALL message( 'data_output_3d', 'PA0387', 0, 1, 0, 6, 0 )
330	CALL cpu_log( log_point(14), 'data_output_3d', 'stop' )
331	RETURN
332	ENDIF
333	ENDIF
334
335	!
336	!-- Update the netCDF time axis
337	!-- In case of parallel output, this is only done by PE0 to increase the
338	!-- performance.
339	#if defined( __netcdf )
340	do3d_time_count(av) = do3d_time_count(av) + 1
341	IF ( myid == 0 ) THEN
342	nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_time_3d(av), &
343	(/ time_since_reference_point /), &
344	start = (/ do3d_time_count(av) /), &
345	count = (/ 1 /) )
346	CALL netcdf_handle_error( 'data_output_3d', 376 )
347	ENDIF
348	#endif
349
350	!
351	!-- Loop over all variables to be written.
352	if = 1
353
354	DO WHILE ( do3d(av,if)(1:1) /= ' ' )
355
356	!
357	!-- Temporary solution to account for data output within the new urban
358	!-- surface model (urban_surface_mod.f90), see also SELECT CASE ( trimvar ).
359	!-- Store the array chosen on the temporary array.
360	trimvar = TRIM( do3d(av,if) )
361	IF ( urban_surface .AND. trimvar(1:4) == 'usm_' ) THEN
362	trimvar = 'usm_output'
363	resorted = .TRUE.
364	nzb_do = nzub
365	nzt_do = nzut
366	ELSE
367	resorted = .FALSE.
368	nzb_do = nzb
369	nzt_do = nz_do3d
370	ENDIF
371	!
372	!-- Set flag to steer output of radiation, land-surface, or user-defined
373	!-- quantities
374	found = .FALSE.
375	!
376	!-- Allocate a temporary array with the desired output dimensions.
377	ALLOCATE( local_pf(nxl:nxr,nys:nyn,nzb_do:nzt_do) )
378	!
379	!-- Before each output, set array local_pf to fill value
380	local_pf = fill_value
381	!
382	!-- Set masking flag for topography for not resorted arrays
383	flag_nr = 0
384
385	SELECT CASE ( trimvar )
386
387	CASE ( 'e' )
388	IF ( av == 0 ) THEN
389	to_be_resorted => e
390	ELSE
391	IF ( .NOT. ALLOCATED( e_av ) ) THEN
392	ALLOCATE( e_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
393	e_av = REAL( fill_value, KIND = wp )
394	ENDIF
395	to_be_resorted => e_av
396	ENDIF
397
398	CASE ( 'lpt' )
399	IF ( av == 0 ) THEN
400	to_be_resorted => pt
401	ELSE
402	IF ( .NOT. ALLOCATED( lpt_av ) ) THEN
403	ALLOCATE( lpt_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
404	lpt_av = REAL( fill_value, KIND = wp )
405	ENDIF
406	to_be_resorted => lpt_av
407	ENDIF
408
409	CASE ( 'p' )
410	IF ( av == 0 ) THEN
411	IF ( psolver /= 'sor' ) CALL exchange_horiz( p, nbgp )
412	to_be_resorted => p
413	ELSE
414	IF ( .NOT. ALLOCATED( p_av ) ) THEN
415	ALLOCATE( p_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
416	p_av = REAL( fill_value, KIND = wp )
417	ENDIF
418	IF ( psolver /= 'sor' ) CALL exchange_horiz( p_av, nbgp )
419	to_be_resorted => p_av
420	ENDIF
421
422	CASE ( 'pc' ) ! particle concentration (requires ghostpoint exchange)
423	IF ( av == 0 ) THEN
424	IF ( simulated_time >= particle_advection_start ) THEN
425	tend = prt_count
426	ELSE
427	tend = 0.0_wp
428	ENDIF
429	DO i = nxl, nxr
430	DO j = nys, nyn
431	DO k = nzb_do, nzt_do
432	local_pf(i,j,k) = tend(k,j,i)
433	ENDDO
434	ENDDO
435	ENDDO
436	resorted = .TRUE.
437	ELSE
438	IF ( .NOT. ALLOCATED( pc_av ) ) THEN
439	ALLOCATE( pc_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
440	pc_av = REAL( fill_value, KIND = wp )
441	ENDIF
442	to_be_resorted => pc_av
443	ENDIF
444
445	CASE ( 'pr' ) ! mean particle radius (effective radius)
446	IF ( av == 0 ) THEN
447	IF ( simulated_time >= particle_advection_start ) THEN
448	DO i = nxl, nxr
449	DO j = nys, nyn
450	DO k = nzb_do, nzt_do
451	number_of_particles = prt_count(k,j,i)
452	IF (number_of_particles <= 0) CYCLE
453	particles => grid_particles(k,j,i)%particles(1:number_of_particles)
454	s_r2 = 0.0_wp
455	s_r3 = 0.0_wp
456	DO n = 1, number_of_particles
457	IF ( particles(n)%particle_mask ) THEN
458	s_r2 = s_r2 + particles(n)%radius*2 &
459	particles(n)%weight_factor
460	s_r3 = s_r3 + particles(n)%radius*3 &
461	particles(n)%weight_factor
462	ENDIF
463	ENDDO
464	IF ( s_r2 > 0.0_wp ) THEN
465	mean_r = s_r3 / s_r2
466	ELSE
467	mean_r = 0.0_wp
468	ENDIF
469	tend(k,j,i) = mean_r
470	ENDDO
471	ENDDO
472	ENDDO
473	ELSE
474	tend = 0.0_wp
475	ENDIF
476	DO i = nxl, nxr
477	DO j = nys, nyn
478	DO k = nzb_do, nzt_do
479	local_pf(i,j,k) = tend(k,j,i)
480	ENDDO
481	ENDDO
482	ENDDO
483	resorted = .TRUE.
484	ELSE
485	IF ( .NOT. ALLOCATED( pr_av ) ) THEN
486	ALLOCATE( pr_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
487	pr_av = REAL( fill_value, KIND = wp )
488	ENDIF
489	to_be_resorted => pr_av
490	ENDIF
491
492	CASE ( 'pt' )
493	IF ( av == 0 ) THEN
494	IF ( .NOT. bulk_cloud_model ) THEN
495	to_be_resorted => pt
496	ELSE
497	DO i = nxl, nxr
498	DO j = nys, nyn
499	DO k = nzb_do, nzt_do
500	local_pf(i,j,k) = pt(k,j,i) + lv_d_cp * &
501	d_exner(k) * &
502	ql(k,j,i)
503	ENDDO
504	ENDDO
505	ENDDO
506	resorted = .TRUE.
507	ENDIF
508	ELSE
509	IF ( .NOT. ALLOCATED( pt_av ) ) THEN
510	ALLOCATE( pt_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
511	pt_av = REAL( fill_value, KIND = wp )
512	ENDIF
513	to_be_resorted => pt_av
514	ENDIF
515
516	CASE ( 'q' )
517	IF ( av == 0 ) THEN
518	to_be_resorted => q
519	ELSE
520	IF ( .NOT. ALLOCATED( q_av ) ) THEN
521	ALLOCATE( q_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
522	q_av = REAL( fill_value, KIND = wp )
523	ENDIF
524	to_be_resorted => q_av
525	ENDIF
526
527	CASE ( 'ql' )
528	IF ( av == 0 ) THEN
529	to_be_resorted => ql
530	ELSE
531	IF ( .NOT. ALLOCATED( ql_av ) ) THEN
532	ALLOCATE( ql_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
533	ql_av = REAL( fill_value, KIND = wp )
534	ENDIF
535	to_be_resorted => ql_av
536	ENDIF
537
538	CASE ( 'ql_c' )
539	IF ( av == 0 ) THEN
540	to_be_resorted => ql_c
541	ELSE
542	IF ( .NOT. ALLOCATED( ql_c_av ) ) THEN
543	ALLOCATE( ql_c_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
544	ql_c_av = REAL( fill_value, KIND = wp )
545	ENDIF
546	to_be_resorted => ql_c_av
547	ENDIF
548
549	CASE ( 'ql_v' )
550	IF ( av == 0 ) THEN
551	to_be_resorted => ql_v
552	ELSE
553	IF ( .NOT. ALLOCATED( ql_v_av ) ) THEN
554	ALLOCATE( ql_v_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
555	ql_v_av = REAL( fill_value, KIND = wp )
556	ENDIF
557	to_be_resorted => ql_v_av
558	ENDIF
559
560	CASE ( 'ql_vp' )
561	IF ( av == 0 ) THEN
562	IF ( simulated_time >= particle_advection_start ) THEN
563	DO i = nxl, nxr
564	DO j = nys, nyn
565	DO k = nzb_do, nzt_do
566	number_of_particles = prt_count(k,j,i)
567	IF (number_of_particles <= 0) CYCLE
568	particles => grid_particles(k,j,i)%particles(1:number_of_particles)
569	DO n = 1, number_of_particles
570	IF ( particles(n)%particle_mask ) THEN
571	tend(k,j,i) = tend(k,j,i) + &
572	particles(n)%weight_factor / &
573	prt_count(k,j,i)
574	ENDIF
575	ENDDO
576	ENDDO
577	ENDDO
578	ENDDO
579	ELSE
580	tend = 0.0_wp
581	ENDIF
582	DO i = nxl, nxr
583	DO j = nys, nyn
584	DO k = nzb_do, nzt_do
585	local_pf(i,j,k) = tend(k,j,i)
586	ENDDO
587	ENDDO
588	ENDDO
589	resorted = .TRUE.
590	ELSE
591	IF ( .NOT. ALLOCATED( ql_vp_av ) ) THEN
592	ALLOCATE( ql_vp_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
593	ql_vp_av = REAL( fill_value, KIND = wp )
594	ENDIF
595	to_be_resorted => ql_vp_av
596	ENDIF
597
598	CASE ( 'qv' )
599	IF ( av == 0 ) THEN
600	DO i = nxl, nxr
601	DO j = nys, nyn
602	DO k = nzb_do, nzt_do
603	local_pf(i,j,k) = q(k,j,i) - ql(k,j,i)
604	ENDDO
605	ENDDO
606	ENDDO
607	resorted = .TRUE.
608	ELSE
609	IF ( .NOT. ALLOCATED( qv_av ) ) THEN
610	ALLOCATE( qv_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
611	qv_av = REAL( fill_value, KIND = wp )
612	ENDIF
613	to_be_resorted => qv_av
614	ENDIF
615
616	CASE ( 'rho_ocean' )
617	IF ( av == 0 ) THEN
618	to_be_resorted => rho_ocean
619	ELSE
620	IF ( .NOT. ALLOCATED( rho_ocean_av ) ) THEN
621	ALLOCATE( u_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
622	u_av = REAL( fill_value, KIND = wp )
623	ENDIF
624	to_be_resorted => rho_ocean_av
625	ENDIF
626
627	CASE ( 's' )
628	IF ( av == 0 ) THEN
629	to_be_resorted => s
630	ELSE
631	IF ( .NOT. ALLOCATED( s_av ) ) THEN
632	ALLOCATE( s_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
633	s_av = REAL( fill_value, KIND = wp )
634	ENDIF
635	to_be_resorted => s_av
636	ENDIF
637
638	CASE ( 'sa' )
639	IF ( av == 0 ) THEN
640	to_be_resorted => sa
641	ELSE
642	IF ( .NOT. ALLOCATED( sa_av ) ) THEN
643	ALLOCATE( sa_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
644	sa_av = REAL( fill_value, KIND = wp )
645	ENDIF
646	to_be_resorted => sa_av
647	ENDIF
648
649	CASE ( 'u' )
650	flag_nr = 1
651	IF ( av == 0 ) THEN
652	to_be_resorted => u
653	ELSE
654	IF ( .NOT. ALLOCATED( u_av ) ) THEN
655	ALLOCATE( u_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
656	u_av = REAL( fill_value, KIND = wp )
657	ENDIF
658	to_be_resorted => u_av
659	ENDIF
660
661	CASE ( 'v' )
662	flag_nr = 2
663	IF ( av == 0 ) THEN
664	to_be_resorted => v
665	ELSE
666	IF ( .NOT. ALLOCATED( v_av ) ) THEN
667	ALLOCATE( v_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
668	v_av = REAL( fill_value, KIND = wp )
669	ENDIF
670	to_be_resorted => v_av
671	ENDIF
672
673	CASE ( 'vpt' )
674	IF ( av == 0 ) THEN
675	to_be_resorted => vpt
676	ELSE
677	IF ( .NOT. ALLOCATED( vpt_av ) ) THEN
678	ALLOCATE( vpt_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
679	vpt_av = REAL( fill_value, KIND = wp )
680	ENDIF
681	to_be_resorted => vpt_av
682	ENDIF
683
684	CASE ( 'w' )
685	flag_nr = 3
686	IF ( av == 0 ) THEN
687	to_be_resorted => w
688	ELSE
689	IF ( .NOT. ALLOCATED( w_av ) ) THEN
690	ALLOCATE( w_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
691	w_av = REAL( fill_value, KIND = wp )
692	ENDIF
693	to_be_resorted => w_av
694	ENDIF
695	!
696	!-- Block of urban surface model outputs
697	CASE ( 'usm_output' )
698	CALL usm_data_output_3d( av, do3d(av,if), found, local_pf, &
699	nzb_do, nzt_do )
700
701	CASE DEFAULT
702
703	IF ( .NOT. found ) THEN
704	CALL tcm_data_output_3d( av, do3d(av,if), found, local_pf, &
705	nzb_do, nzt_do )
706	resorted = .TRUE.
707	ENDIF
708
709	!
710	!-- Microphysic module quantities
711	IF ( .NOT. found .AND. bulk_cloud_model ) THEN
712	CALL bcm_data_output_3d( av, do3d(av,if), found, local_pf, &
713	nzb_do, nzt_do )
714	resorted = .TRUE.
715	ENDIF
716
717	!
718	!-- Land surface quantity
719	IF ( .NOT. found .AND. land_surface ) THEN
720	!
721	!-- For soil model quantities, it is required to re-allocate local_pf
722	nzb_do = nzb_soil
723	nzt_do = nzt_soil
724
725	DEALLOCATE ( local_pf )
726	ALLOCATE( local_pf(nxl:nxr,nys:nyn,nzb_do:nzt_do) )
727	local_pf = fill_value
728
729	CALL lsm_data_output_3d( av, do3d(av,if), found, local_pf )
730	resorted = .TRUE.
731
732	!
733	!-- If no soil model variable was found, re-allocate local_pf
734	IF ( .NOT. found ) THEN
735	nzb_do = nzb
736	nzt_do = nz_do3d
737
738	DEALLOCATE ( local_pf )
739	ALLOCATE( local_pf(nxl:nxr,nys:nyn,nzb_do:nzt_do) )
740	ENDIF
741
742	ENDIF
743
744	!
745	!-- Radiation quantity
746	IF ( .NOT. found .AND. radiation ) THEN
747	CALL radiation_data_output_3d( av, do3d(av,if), found, &
748	local_pf, nzb_do, nzt_do )
749	resorted = .TRUE.
750	ENDIF
751
752	!
753	!-- Gust module quantities
754	IF ( .NOT. found .AND. gust_module_enabled ) THEN
755	CALL gust_data_output_3d( av, do3d(av,if), found, local_pf, &
756	nzb_do, nzt_do )
757	resorted = .TRUE.
758	ENDIF
759
760	!
761	!-- Chemistry model output
762	IF ( .NOT. found .AND. air_chemistry ) THEN
763	CALL chem_data_output_3d( av, do3d(av,if), found, &
764	local_pf, fill_value, nzb_do, nzt_do )
765	resorted = .TRUE.
766	ENDIF
767
768	!
769	!-- Plant canopy model output
770	IF ( .NOT. found .AND. plant_canopy ) THEN
771	CALL pcm_data_output_3d( av, do3d(av,if), found, local_pf, &
772	fill_value, nzb_do, nzt_do )
773	resorted = .TRUE.
774	ENDIF
775
776	!
777	!-- User defined quantity
778	IF ( .NOT. found ) THEN
779	CALL user_data_output_3d( av, do3d(av,if), found, local_pf, &
780	nzb_do, nzt_do )
781	resorted = .TRUE.
782	ENDIF
783
784	IF ( .NOT. found ) THEN
785	message_string = 'no output available for: ' // &
786	TRIM( do3d(av,if) )
787	CALL message( 'data_output_3d', 'PA0182', 0, 0, 0, 6, 0 )
788	ENDIF
789
790	END SELECT
791
792	!
793	!-- Resort the array to be output, if not done above
794	IF ( .NOT. resorted ) THEN
795	DO i = nxl, nxr
796	DO j = nys, nyn
797	DO k = nzb_do, nzt_do
798	local_pf(i,j,k) = MERGE( &
799	to_be_resorted(k,j,i), &
800	REAL( fill_value, KIND = wp ), &
801	BTEST( wall_flags_0(k,j,i), flag_nr ) )
802	ENDDO
803	ENDDO
804	ENDDO
805	ENDIF
806
807	!
808	!-- Output of the 3D-array
809	#if defined( __parallel )
810	IF ( netcdf_data_format < 5 ) THEN
811	!
812	!-- Non-parallel netCDF output. Data is output in parallel in
813	!-- FORTRAN binary format here, and later collected into one file by
814	!-- combine_plot_fields
815	IF ( myid == 0 ) THEN
816	WRITE ( 30 ) time_since_reference_point, &
817	do3d_time_count(av), av
818	ENDIF
819	DO i = 0, io_blocks-1
820	IF ( i == io_group ) THEN
821	WRITE ( 30 ) nxl, nxr, nys, nyn, nzb_do, nzt_do
822	WRITE ( 30 ) local_pf(:,:,nzb_do:nzt_do)
823	ENDIF
824
825	CALL MPI_BARRIER( comm2d, ierr )
826
827	ENDDO
828
829	ELSE
830	#if defined( __netcdf )
831	!
832	!-- Parallel output in netCDF4/HDF5 format.
833	! IF ( nxr == nx .AND. nyn /= ny ) THEN
834	! nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,if), &
835	! local_pf(nxl:nxr+1,nys:nyn,nzb_do:nzt_do), &
836	! start = (/ nxl+1, nys+1, nzb_do+1, do3d_time_count(av) /), &
837	! count = (/ nxr-nxl+2, nyn-nys+1, nzt_do-nzb_do+1, 1 /) )
838	! ELSEIF ( nxr /= nx .AND. nyn == ny ) THEN
839	! nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,if), &
840	! local_pf(nxl:nxr,nys:nyn+1,nzb_do:nzt_do), &
841	! start = (/ nxl+1, nys+1, nzb_do+1, do3d_time_count(av) /), &
842	! count = (/ nxr-nxl+1, nyn-nys+2, nzt_do-nzb_do+1, 1 /) )
843	! ELSEIF ( nxr == nx .AND. nyn == ny ) THEN
844	! nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,if), &
845	! local_pf(nxl:nxr+1,nys:nyn+1,nzb_do:nzt_do ), &
846	! start = (/ nxl+1, nys+1, nzb_do+1, do3d_time_count(av) /), &
847	! count = (/ nxr-nxl+2, nyn-nys+2, nzt_do-nzb_do+1, 1 /) )
848	! ELSE
849	nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,if), &
850	local_pf(nxl:nxr,nys:nyn,nzb_do:nzt_do), &
851	start = (/ nxl+1, nys+1, nzb_do+1, do3d_time_count(av) /), &
852	count = (/ nxr-nxl+1, nyn-nys+1, nzt_do-nzb_do+1, 1 /) )
853	! ENDIF
854	CALL netcdf_handle_error( 'data_output_3d', 386 )
855	#endif
856	ENDIF
857	#else
858	#if defined( __netcdf )
859	nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,if), &
860	local_pf(nxl:nxr+1,nys:nyn+1,nzb_do:nzt_do), &
861	start = (/ 1, 1, 1, do3d_time_count(av) /), &
862	count = (/ nx+1, ny+1, nzt_do-nzb_do+1, 1 /) )
863	CALL netcdf_handle_error( 'data_output_3d', 446 )
864	#endif
865	#endif
866
867	if = if + 1
868
869	!
870	!-- Deallocate temporary array
871	DEALLOCATE ( local_pf )
872
873	ENDDO
874
875	CALL cpu_log( log_point(14), 'data_output_3d', 'stop' )
876
877	END SUBROUTINE data_output_3d

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