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source: palm/trunk/SOURCE/data_output_3d.f90 @ 3068

Last change on this file since 3068 was 3049, checked in by Giersch, 7 years ago
Revision history corrected
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1	!> @file data_output_3d.f90
2	!------------------------------------------------------------------------------!
3	! This file is part of the PALM model system.
4	!
5	! PALM is free software: you can redistribute it and/or modify it under the
6	! terms of the GNU General Public License as published by the Free Software
7	! Foundation, either version 3 of the License, or (at your option) any later
8	! version.
9	!
10	! PALM is distributed in the hope that it will be useful, but WITHOUT ANY
11	! WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR
12	! A PARTICULAR PURPOSE. See the GNU General Public License for more details.
13	!
14	! You should have received a copy of the GNU General Public License along with
15	! PALM. If not, see <http://www.gnu.org/licenses/>.
16	!
17	! Copyright 1997-2018 Leibniz Universitaet Hannover
18	!------------------------------------------------------------------------------!
19	!
20	! Current revisions:
21	! ------------------
22	!
23	!
24	! Former revisions:
25	! -----------------
26	! $Id: data_output_3d.f90 3049 2018-05-29 13:52:36Z Giersch $
27	! Error messages revised
28	!
29	! 3045 2018-05-28 07:55:41Z Giersch
30	! Error message revised
31	!
32	! 3014 2018-05-09 08:42:38Z maronga
33	! Added nzb_do and nzt_do for some modules for 3d output
34	!
35	! 3004 2018-04-27 12:33:25Z Giersch
36	! Allocation checks implemented (averaged data will be assigned to fill values
37	! if no allocation happened so far)
38	!
39	! 2967 2018-04-13 11:22:08Z raasch
40	! bugfix: missing parallel cpp-directives added
41	!
42	! 2817 2018-02-19 16:32:21Z knoop
43	! Preliminary gust module interface implemented
44	!
45	! 2766 2018-01-22 17:17:47Z kanani
46	! Removed preprocessor directive __chem
47	!
48	! 2756 2018-01-16 18:11:14Z suehring
49	! Fill values for 3D output of chemical species introduced.
50	!
51	! 2746 2018-01-15 12:06:04Z suehring
52	! Move flag plant canopy to modules
53	!
54	! 2718 2018-01-02 08:49:38Z maronga
55	! Corrected "Former revisions" section
56	!
57	! 2696 2017-12-14 17:12:51Z kanani
58	! Change in file header (GPL part)
59	! Implementation of turbulence_closure_mod (TG)
60	! Implementation of chemistry module (FK)
61	! Set fill values at topography grid points or e.g. non-natural-type surface
62	! in case of LSM output (MS)
63	!
64	! 2512 2017-10-04 08:26:59Z raasch
65	! upper bounds of 3d output changed from nx+1,ny+1 to nx,ny
66	! no output of ghost layer data
67	!
68	! 2292 2017-06-20 09:51:42Z schwenkel
69	! Implementation of new microphysic scheme: cloud_scheme = 'morrison'
70	! includes two more prognostic equations for cloud drop concentration (nc)
71	! and cloud water content (qc).
72	!
73	! 2233 2017-05-30 18:08:54Z suehring
74	!
75	! 2232 2017-05-30 17:47:52Z suehring
76	! Adjustments to new topography concept
77	!
78	! 2209 2017-04-19 09:34:46Z kanani
79	! Added plant canopy model output
80	!
81	! 2031 2016-10-21 15:11:58Z knoop
82	! renamed variable rho to rho_ocean and rho_av to rho_ocean_av
83	!
84	! 2011 2016-09-19 17:29:57Z kanani
85	! Flag urban_surface is now defined in module control_parameters,
86	! changed prefix for urban surface model output to "usm_",
87	! introduced control parameter varnamelength for LEN of trimvar.
88	!
89	! 2007 2016-08-24 15:47:17Z kanani
90	! Added support for new urban surface model (temporary modifications of
91	! SELECT CASE ( ) necessary, see variable trimvar)
92	!
93	! 2000 2016-08-20 18:09:15Z knoop
94	! Forced header and separation lines into 80 columns
95	!
96	! 1980 2016-07-29 15:51:57Z suehring
97	! Bugfix, in order to steer user-defined output, setting flag found explicitly
98	! to .F.
99	!
100	! 1976 2016-07-27 13:28:04Z maronga
101	! Output of radiation quantities is now done directly in the respective module
102	!
103	! 1972 2016-07-26 07:52:02Z maronga
104	! Output of land surface quantities is now done directly in the respective module.
105	! Unnecessary directive __parallel removed.
106	!
107	! 1960 2016-07-12 16:34:24Z suehring
108	! Scalar surface flux added
109	!
110	! 1849 2016-04-08 11:33:18Z hoffmann
111	! prr moved to arrays_3d
112	!
113	! 1822 2016-04-07 07:49:42Z hoffmann
114	! prr vertical dimensions set to nzb_do to nzt_do. Unused variables deleted.
115	!
116	! 1808 2016-04-05 19:44:00Z raasch
117	! test output removed
118	!
119	! 1783 2016-03-06 18:36:17Z raasch
120	! name change of netcdf routines and module + related changes
121	!
122	! 1745 2016-02-05 13:06:51Z gronemeier
123	! Bugfix: test if time axis limit exceeds moved to point after call of check_open
124	!
125	! 1691 2015-10-26 16:17:44Z maronga
126	! Added output of radiative heating rates for RRTMG
127	!
128	! 1682 2015-10-07 23:56:08Z knoop
129	! Code annotations made doxygen readable
130	!
131	! 1585 2015-04-30 07:05:52Z maronga
132	! Added support for RRTMG
133	!
134	! 1551 2015-03-03 14:18:16Z maronga
135	! Added suppport for land surface model and radiation model output. In the course
136	! of this action, the limits for vertical loops have been changed (from nzb and
137	! nzt+1 to nzb_do and nzt_do, respectively in order to allow soil model output).
138	! Moreover, a new vertical grid zs was introduced.
139	!
140	! 1359 2014-04-11 17:15:14Z hoffmann
141	! New particle structure integrated.
142	!
143	! 1353 2014-04-08 15:21:23Z heinze
144	! REAL constants provided with KIND-attribute
145	!
146	! 1327 2014-03-21 11:00:16Z raasch
147	! parts concerning avs output removed,
148	! -netcdf output queries
149	!
150	! 1320 2014-03-20 08:40:49Z raasch
151	! ONLY-attribute added to USE-statements,
152	! kind-parameters added to all INTEGER and REAL declaration statements,
153	! kinds are defined in new module kinds,
154	! old module precision_kind is removed,
155	! revision history before 2012 removed,
156	! comment fields (!:) to be used for variable explanations added to
157	! all variable declaration statements
158	!
159	! 1318 2014-03-17 13:35:16Z raasch
160	! barrier argument removed from cpu_log,
161	! module interfaces removed
162	!
163	! 1308 2014-03-13 14:58:42Z fricke
164	! Check, if the limit of the time dimension is exceeded for parallel output
165	! To increase the performance for parallel output, the following is done:
166	! - Update of time axis is only done by PE0
167	!
168	! 1244 2013-10-31 08:16:56Z raasch
169	! Bugfix for index bounds in case of 3d-parallel output
170	!
171	! 1115 2013-03-26 18:16:16Z hoffmann
172	! ql is calculated by calc_liquid_water_content
173	!
174	! 1106 2013-03-04 05:31:38Z raasch
175	! array_kind renamed precision_kind
176	!
177	! 1076 2012-12-05 08:30:18Z hoffmann
178	! Bugfix in output of ql
179	!
180	! 1053 2012-11-13 17:11:03Z hoffmann
181	! +nr, qr, prr, qc and averaged quantities
182	!
183	! 1036 2012-10-22 13:43:42Z raasch
184	! code put under GPL (PALM 3.9)
185	!
186	! 1031 2012-10-19 14:35:30Z raasch
187	! netCDF4 without parallel file support implemented
188	!
189	! 1007 2012-09-19 14:30:36Z franke
190	! Bugfix: missing calculation of ql_vp added
191	!
192	! Revision 1.1 1997/09/03 06:29:36 raasch
193	! Initial revision
194	!
195	!
196	! Description:
197	! ------------
198	!> Output of the 3D-arrays in netCDF and/or AVS format.
199	!------------------------------------------------------------------------------!
200	SUBROUTINE data_output_3d( av )
201
202
203	USE arrays_3d, &
204	ONLY: e, nc, nr, p, pt, prr, q, qc, ql, ql_c, ql_v, qr, rho_ocean, s, &
205	sa, tend, u, v, vpt, w
206
207	USE averaging
208
209	USE chemistry_model_mod, &
210	ONLY: chem_data_output_3d
211
212	USE cloud_parameters, &
213	ONLY: l_d_cp, pt_d_t
214
215	USE control_parameters, &
216	ONLY: air_chemistry, cloud_physics, do3d, do3d_no, do3d_time_count, &
217	io_blocks, io_group, land_surface, message_string, &
218	ntdim_3d, nz_do3d, plant_canopy, &
219	psolver, simulated_time, time_since_reference_point, &
220	urban_surface, varnamelength
221
222	USE cpulog, &
223	ONLY: log_point, cpu_log
224
225	USE gust_mod, &
226	ONLY: gust_data_output_3d, gust_module_enabled
227
228	USE indices, &
229	ONLY: nbgp, nx, nxl, nxlg, nxr, nxrg, ny, nyn, nyng, nys, nysg, nzb, &
230	nzt, wall_flags_0
231
232	USE kinds
233
234	USE land_surface_model_mod, &
235	ONLY: lsm_data_output_3d, nzb_soil, nzt_soil
236
237	#if defined( __netcdf )
238	USE NETCDF
239	#endif
240
241	USE netcdf_interface, &
242	ONLY: fill_value, id_set_3d, id_var_do3d, id_var_time_3d, nc_stat, &
243	netcdf_data_format, netcdf_handle_error
244
245	USE particle_attributes, &
246	ONLY: grid_particles, number_of_particles, particles, &
247	particle_advection_start, prt_count
248
249	USE pegrid
250
251	USE plant_canopy_model_mod, &
252	ONLY: pcm_data_output_3d
253
254	USE radiation_model_mod, &
255	ONLY: nzub, nzut, radiation, radiation_data_output_3d
256
257	USE turbulence_closure_mod, &
258	ONLY: tcm_data_output_3d
259
260	USE urban_surface_mod, &
261	ONLY: usm_data_output_3d
262
263
264	IMPLICIT NONE
265
266	INTEGER(iwp) :: av !<
267	INTEGER(iwp) :: flag_nr !< number of masking flag
268	INTEGER(iwp) :: i !<
269	INTEGER(iwp) :: if !<
270	INTEGER(iwp) :: j !<
271	INTEGER(iwp) :: k !<
272	INTEGER(iwp) :: n !<
273	INTEGER(iwp) :: nzb_do !< vertical lower limit for data output
274	INTEGER(iwp) :: nzt_do !< vertical upper limit for data output
275
276	LOGICAL :: found !<
277	LOGICAL :: resorted !<
278
279	REAL(wp) :: mean_r !<
280	REAL(wp) :: s_r2 !<
281	REAL(wp) :: s_r3 !<
282
283	REAL(sp), DIMENSION(:,:,:), ALLOCATABLE :: local_pf !<
284
285	REAL(wp), DIMENSION(:,:,:), POINTER :: to_be_resorted !<
286
287	CHARACTER (LEN=varnamelength) :: trimvar !< TRIM of output-variable string
288
289	!
290	!-- Return, if nothing to output
291	IF ( do3d_no(av) == 0 ) RETURN
292
293	CALL cpu_log (log_point(14),'data_output_3d','start')
294
295	!
296	!-- Open output file.
297	!-- For classic or 64bit netCDF output on more than one PE, each PE opens its
298	!-- own file and writes the data of its subdomain in binary format. After the
299	!-- run, these files are combined to one NetCDF file by combine_plot_fields.
300	!-- For netCDF4/HDF5 output, data is written in parallel into one file.
301	IF ( netcdf_data_format < 5 ) THEN
302	#if defined( __parallel )
303	CALL check_open( 30 )
304	#endif
305	IF ( myid == 0 ) CALL check_open( 106+av*10 )
306	ELSE
307	CALL check_open( 106+av*10 )
308	ENDIF
309
310	!
311	!-- For parallel netcdf output the time axis must be limited. Return, if this
312	!-- limit is exceeded. This could be the case, if the simulated time exceeds
313	!-- the given end time by the length of the given output interval.
314	IF ( netcdf_data_format > 4 ) THEN
315	IF ( do3d_time_count(av) + 1 > ntdim_3d(av) ) THEN
316	WRITE ( message_string, * ) 'Output of 3d data is not given at t=', &
317	simulated_time, '&because the maximum ', &
318	'number of output time levels is ', &
319	'exceeded.'
320	CALL message( 'data_output_3d', 'PA0387', 0, 1, 0, 6, 0 )
321	CALL cpu_log( log_point(14), 'data_output_3d', 'stop' )
322	RETURN
323	ENDIF
324	ENDIF
325
326	!
327	!-- Update the netCDF time axis
328	!-- In case of parallel output, this is only done by PE0 to increase the
329	!-- performance.
330	#if defined( __netcdf )
331	do3d_time_count(av) = do3d_time_count(av) + 1
332	IF ( myid == 0 ) THEN
333	nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_time_3d(av), &
334	(/ time_since_reference_point /), &
335	start = (/ do3d_time_count(av) /), &
336	count = (/ 1 /) )
337	CALL netcdf_handle_error( 'data_output_3d', 376 )
338	ENDIF
339	#endif
340
341	!
342	!-- Loop over all variables to be written.
343	if = 1
344
345	DO WHILE ( do3d(av,if)(1:1) /= ' ' )
346
347	!
348	!-- Temporary solution to account for data output within the new urban
349	!-- surface model (urban_surface_mod.f90), see also SELECT CASE ( trimvar ).
350	!-- Store the array chosen on the temporary array.
351	trimvar = TRIM( do3d(av,if) )
352	IF ( urban_surface .AND. trimvar(1:4) == 'usm_' ) THEN
353	trimvar = 'usm_output'
354	resorted = .TRUE.
355	nzb_do = nzub
356	nzt_do = nzut
357	ELSE
358	resorted = .FALSE.
359	nzb_do = nzb
360	nzt_do = nz_do3d
361	ENDIF
362	!
363	!-- Set flag to steer output of radiation, land-surface, or user-defined
364	!-- quantities
365	found = .FALSE.
366	!
367	!-- Allocate a temporary array with the desired output dimensions.
368	ALLOCATE( local_pf(nxl:nxr,nys:nyn,nzb_do:nzt_do) )
369	!
370	!-- Before each output, set array local_pf to fill value
371	local_pf = fill_value
372	!
373	!-- Set masking flag for topography for not resorted arrays
374	flag_nr = 0
375
376	SELECT CASE ( trimvar )
377
378	CASE ( 'e' )
379	IF ( av == 0 ) THEN
380	to_be_resorted => e
381	ELSE
382	IF ( .NOT. ALLOCATED( e_av ) ) THEN
383	ALLOCATE( e_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
384	e_av = REAL( fill_value, KIND = wp )
385	ENDIF
386	to_be_resorted => e_av
387	ENDIF
388
389	CASE ( 'lpt' )
390	IF ( av == 0 ) THEN
391	to_be_resorted => pt
392	ELSE
393	IF ( .NOT. ALLOCATED( lpt_av ) ) THEN
394	ALLOCATE( lpt_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
395	lpt_av = REAL( fill_value, KIND = wp )
396	ENDIF
397	to_be_resorted => lpt_av
398	ENDIF
399
400	CASE ( 'nc' )
401	IF ( av == 0 ) THEN
402	to_be_resorted => nc
403	ELSE
404	IF ( .NOT. ALLOCATED( nc_av ) ) THEN
405	ALLOCATE( nc_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
406	nc_av = REAL( fill_value, KIND = wp )
407	ENDIF
408	to_be_resorted => nc_av
409	ENDIF
410
411	CASE ( 'nr' )
412	IF ( av == 0 ) THEN
413	to_be_resorted => nr
414	ELSE
415	IF ( .NOT. ALLOCATED( nr_av ) ) THEN
416	ALLOCATE( nr_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
417	nr_av = REAL( fill_value, KIND = wp )
418	ENDIF
419	to_be_resorted => nr_av
420	ENDIF
421
422	CASE ( 'p' )
423	IF ( av == 0 ) THEN
424	IF ( psolver /= 'sor' ) CALL exchange_horiz( p, nbgp )
425	to_be_resorted => p
426	ELSE
427	IF ( .NOT. ALLOCATED( p_av ) ) THEN
428	ALLOCATE( p_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
429	p_av = REAL( fill_value, KIND = wp )
430	ENDIF
431	IF ( psolver /= 'sor' ) CALL exchange_horiz( p_av, nbgp )
432	to_be_resorted => p_av
433	ENDIF
434
435	CASE ( 'pc' ) ! particle concentration (requires ghostpoint exchange)
436	IF ( av == 0 ) THEN
437	IF ( simulated_time >= particle_advection_start ) THEN
438	tend = prt_count
439	ELSE
440	tend = 0.0_wp
441	ENDIF
442	DO i = nxl, nxr
443	DO j = nys, nyn
444	DO k = nzb_do, nzt_do
445	local_pf(i,j,k) = tend(k,j,i)
446	ENDDO
447	ENDDO
448	ENDDO
449	resorted = .TRUE.
450	ELSE
451	IF ( .NOT. ALLOCATED( pc_av ) ) THEN
452	ALLOCATE( pc_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
453	pc_av = REAL( fill_value, KIND = wp )
454	ENDIF
455	to_be_resorted => pc_av
456	ENDIF
457
458	CASE ( 'pr' ) ! mean particle radius (effective radius)
459	IF ( av == 0 ) THEN
460	IF ( simulated_time >= particle_advection_start ) THEN
461	DO i = nxl, nxr
462	DO j = nys, nyn
463	DO k = nzb_do, nzt_do
464	number_of_particles = prt_count(k,j,i)
465	IF (number_of_particles <= 0) CYCLE
466	particles => grid_particles(k,j,i)%particles(1:number_of_particles)
467	s_r2 = 0.0_wp
468	s_r3 = 0.0_wp
469	DO n = 1, number_of_particles
470	IF ( particles(n)%particle_mask ) THEN
471	s_r2 = s_r2 + particles(n)%radius*2 &
472	particles(n)%weight_factor
473	s_r3 = s_r3 + particles(n)%radius*3 &
474	particles(n)%weight_factor
475	ENDIF
476	ENDDO
477	IF ( s_r2 > 0.0_wp ) THEN
478	mean_r = s_r3 / s_r2
479	ELSE
480	mean_r = 0.0_wp
481	ENDIF
482	tend(k,j,i) = mean_r
483	ENDDO
484	ENDDO
485	ENDDO
486	ELSE
487	tend = 0.0_wp
488	ENDIF
489	DO i = nxl, nxr
490	DO j = nys, nyn
491	DO k = nzb_do, nzt_do
492	local_pf(i,j,k) = tend(k,j,i)
493	ENDDO
494	ENDDO
495	ENDDO
496	resorted = .TRUE.
497	ELSE
498	IF ( .NOT. ALLOCATED( pr_av ) ) THEN
499	ALLOCATE( pr_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
500	pr_av = REAL( fill_value, KIND = wp )
501	ENDIF
502	to_be_resorted => pr_av
503	ENDIF
504
505	CASE ( 'prr' )
506	IF ( av == 0 ) THEN
507	DO i = nxl, nxr
508	DO j = nys, nyn
509	DO k = nzb_do, nzt_do
510	local_pf(i,j,k) = prr(k,j,i)
511	ENDDO
512	ENDDO
513	ENDDO
514	ELSE
515	IF ( .NOT. ALLOCATED( prr_av ) ) THEN
516	ALLOCATE( prr_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
517	prr_av = REAL( fill_value, KIND = wp )
518	ENDIF
519	DO i = nxl, nxr
520	DO j = nys, nyn
521	DO k = nzb_do, nzt_do
522	local_pf(i,j,k) = prr_av(k,j,i)
523	ENDDO
524	ENDDO
525	ENDDO
526	ENDIF
527	resorted = .TRUE.
528
529	CASE ( 'pt' )
530	IF ( av == 0 ) THEN
531	IF ( .NOT. cloud_physics ) THEN
532	to_be_resorted => pt
533	ELSE
534	DO i = nxl, nxr
535	DO j = nys, nyn
536	DO k = nzb_do, nzt_do
537	local_pf(i,j,k) = pt(k,j,i) + l_d_cp * &
538	pt_d_t(k) * &
539	ql(k,j,i)
540	ENDDO
541	ENDDO
542	ENDDO
543	resorted = .TRUE.
544	ENDIF
545	ELSE
546	IF ( .NOT. ALLOCATED( pt_av ) ) THEN
547	ALLOCATE( pt_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
548	pt_av = REAL( fill_value, KIND = wp )
549	ENDIF
550	to_be_resorted => pt_av
551	ENDIF
552
553	CASE ( 'q' )
554	IF ( av == 0 ) THEN
555	to_be_resorted => q
556	ELSE
557	IF ( .NOT. ALLOCATED( q_av ) ) THEN
558	ALLOCATE( q_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
559	q_av = REAL( fill_value, KIND = wp )
560	ENDIF
561	to_be_resorted => q_av
562	ENDIF
563
564	CASE ( 'qc' )
565	IF ( av == 0 ) THEN
566	to_be_resorted => qc
567	ELSE
568	IF ( .NOT. ALLOCATED( qc_av ) ) THEN
569	ALLOCATE( qc_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
570	qc_av = REAL( fill_value, KIND = wp )
571	ENDIF
572	to_be_resorted => qc_av
573	ENDIF
574
575	CASE ( 'ql' )
576	IF ( av == 0 ) THEN
577	to_be_resorted => ql
578	ELSE
579	IF ( .NOT. ALLOCATED( ql_av ) ) THEN
580	ALLOCATE( ql_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
581	ql_av = REAL( fill_value, KIND = wp )
582	ENDIF
583	to_be_resorted => ql_av
584	ENDIF
585
586	CASE ( 'ql_c' )
587	IF ( av == 0 ) THEN
588	to_be_resorted => ql_c
589	ELSE
590	IF ( .NOT. ALLOCATED( ql_c_av ) ) THEN
591	ALLOCATE( ql_c_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
592	ql_c_av = REAL( fill_value, KIND = wp )
593	ENDIF
594	to_be_resorted => ql_c_av
595	ENDIF
596
597	CASE ( 'ql_v' )
598	IF ( av == 0 ) THEN
599	to_be_resorted => ql_v
600	ELSE
601	IF ( .NOT. ALLOCATED( ql_v_av ) ) THEN
602	ALLOCATE( ql_v_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
603	ql_v_av = REAL( fill_value, KIND = wp )
604	ENDIF
605	to_be_resorted => ql_v_av
606	ENDIF
607
608	CASE ( 'ql_vp' )
609	IF ( av == 0 ) THEN
610	IF ( simulated_time >= particle_advection_start ) THEN
611	DO i = nxl, nxr
612	DO j = nys, nyn
613	DO k = nzb_do, nzt_do
614	number_of_particles = prt_count(k,j,i)
615	IF (number_of_particles <= 0) CYCLE
616	particles => grid_particles(k,j,i)%particles(1:number_of_particles)
617	DO n = 1, number_of_particles
618	IF ( particles(n)%particle_mask ) THEN
619	tend(k,j,i) = tend(k,j,i) + &
620	particles(n)%weight_factor / &
621	prt_count(k,j,i)
622	ENDIF
623	ENDDO
624	ENDDO
625	ENDDO
626	ENDDO
627	ELSE
628	tend = 0.0_wp
629	ENDIF
630	DO i = nxl, nxr
631	DO j = nys, nyn
632	DO k = nzb_do, nzt_do
633	local_pf(i,j,k) = tend(k,j,i)
634	ENDDO
635	ENDDO
636	ENDDO
637	resorted = .TRUE.
638	ELSE
639	IF ( .NOT. ALLOCATED( ql_vp_av ) ) THEN
640	ALLOCATE( ql_vp_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
641	ql_vp_av = REAL( fill_value, KIND = wp )
642	ENDIF
643	to_be_resorted => ql_vp_av
644	ENDIF
645
646	CASE ( 'qr' )
647	IF ( av == 0 ) THEN
648	to_be_resorted => qr
649	ELSE
650	IF ( .NOT. ALLOCATED( qr_av ) ) THEN
651	ALLOCATE( qr_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
652	qr_av = REAL( fill_value, KIND = wp )
653	ENDIF
654	to_be_resorted => qr_av
655	ENDIF
656
657	CASE ( 'qv' )
658	IF ( av == 0 ) THEN
659	DO i = nxl, nxr
660	DO j = nys, nyn
661	DO k = nzb_do, nzt_do
662	local_pf(i,j,k) = q(k,j,i) - ql(k,j,i)
663	ENDDO
664	ENDDO
665	ENDDO
666	resorted = .TRUE.
667	ELSE
668	IF ( .NOT. ALLOCATED( qv_av ) ) THEN
669	ALLOCATE( qv_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
670	qv_av = REAL( fill_value, KIND = wp )
671	ENDIF
672	to_be_resorted => qv_av
673	ENDIF
674
675	CASE ( 'rho_ocean' )
676	IF ( av == 0 ) THEN
677	to_be_resorted => rho_ocean
678	ELSE
679	IF ( .NOT. ALLOCATED( rho_ocean_av ) ) THEN
680	ALLOCATE( u_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
681	u_av = REAL( fill_value, KIND = wp )
682	ENDIF
683	to_be_resorted => rho_ocean_av
684	ENDIF
685
686	CASE ( 's' )
687	IF ( av == 0 ) THEN
688	to_be_resorted => s
689	ELSE
690	IF ( .NOT. ALLOCATED( s_av ) ) THEN
691	ALLOCATE( s_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
692	s_av = REAL( fill_value, KIND = wp )
693	ENDIF
694	to_be_resorted => s_av
695	ENDIF
696
697	CASE ( 'sa' )
698	IF ( av == 0 ) THEN
699	to_be_resorted => sa
700	ELSE
701	IF ( .NOT. ALLOCATED( sa_av ) ) THEN
702	ALLOCATE( sa_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
703	sa_av = REAL( fill_value, KIND = wp )
704	ENDIF
705	to_be_resorted => sa_av
706	ENDIF
707
708	CASE ( 'u' )
709	flag_nr = 1
710	IF ( av == 0 ) THEN
711	to_be_resorted => u
712	ELSE
713	IF ( .NOT. ALLOCATED( u_av ) ) THEN
714	ALLOCATE( u_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
715	u_av = REAL( fill_value, KIND = wp )
716	ENDIF
717	to_be_resorted => u_av
718	ENDIF
719
720	CASE ( 'v' )
721	flag_nr = 2
722	IF ( av == 0 ) THEN
723	to_be_resorted => v
724	ELSE
725	IF ( .NOT. ALLOCATED( v_av ) ) THEN
726	ALLOCATE( v_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
727	v_av = REAL( fill_value, KIND = wp )
728	ENDIF
729	to_be_resorted => v_av
730	ENDIF
731
732	CASE ( 'vpt' )
733	IF ( av == 0 ) THEN
734	to_be_resorted => vpt
735	ELSE
736	IF ( .NOT. ALLOCATED( vpt_av ) ) THEN
737	ALLOCATE( vpt_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
738	vpt_av = REAL( fill_value, KIND = wp )
739	ENDIF
740	to_be_resorted => vpt_av
741	ENDIF
742
743	CASE ( 'w' )
744	flag_nr = 3
745	IF ( av == 0 ) THEN
746	to_be_resorted => w
747	ELSE
748	IF ( .NOT. ALLOCATED( w_av ) ) THEN
749	ALLOCATE( w_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
750	w_av = REAL( fill_value, KIND = wp )
751	ENDIF
752	to_be_resorted => w_av
753	ENDIF
754	!
755	!-- Block of urban surface model outputs
756	CASE ( 'usm_output' )
757	CALL usm_data_output_3d( av, do3d(av,if), found, local_pf, &
758	nzb_do, nzt_do )
759
760	CASE DEFAULT
761
762	!
763	!-- Land surface quantity
764	IF ( land_surface ) THEN
765	!
766	!-- For soil model quantities, it is required to re-allocate local_pf
767	nzb_do = nzb_soil
768	nzt_do = nzt_soil
769
770	DEALLOCATE ( local_pf )
771	ALLOCATE( local_pf(nxl:nxr,nys:nyn,nzb_do:nzt_do) )
772	local_pf = fill_value
773
774	CALL lsm_data_output_3d( av, do3d(av,if), found, local_pf )
775	resorted = .TRUE.
776
777	!
778	!-- If no soil model variable was found, re-allocate local_pf
779	IF ( .NOT. found ) THEN
780	nzb_do = nzb
781	nzt_do = nz_do3d
782
783	DEALLOCATE ( local_pf )
784	ALLOCATE( local_pf(nxl:nxr,nys:nyn,nzb_do:nzt_do) )
785	ENDIF
786
787	ENDIF
788
789	IF ( .NOT. found ) THEN
790	CALL tcm_data_output_3d( av, do3d(av,if), found, local_pf, &
791	nzb_do, nzt_do )
792	resorted = .TRUE.
793	ENDIF
794
795	!
796	!-- Radiation quantity
797	IF ( .NOT. found .AND. radiation ) THEN
798	CALL radiation_data_output_3d( av, do3d(av,if), found, &
799	local_pf, nzb_do, nzt_do )
800	resorted = .TRUE.
801	ENDIF
802
803	!
804	!-- Gust module quantities
805	IF ( .NOT. found .AND. gust_module_enabled ) THEN
806	CALL gust_data_output_3d( av, do3d(av,if), found, local_pf, &
807	nzb_do, nzt_do )
808	resorted = .TRUE.
809	ENDIF
810
811	!
812	!-- Chemistry model output
813	IF ( .NOT. found .AND. air_chemistry ) THEN
814	CALL chem_data_output_3d( av, do3d(av,if), found, &
815	local_pf, fill_value, nzb_do, nzt_do )
816	resorted = .TRUE.
817	ENDIF
818
819	!
820	!-- Plant canopy model output
821	IF ( .NOT. found .AND. plant_canopy ) THEN
822	CALL pcm_data_output_3d( av, do3d(av,if), found, local_pf, &
823	fill_value, nzb_do, nzt_do )
824	resorted = .TRUE.
825	ENDIF
826
827	!
828	!-- User defined quantity
829	IF ( .NOT. found ) THEN
830	CALL user_data_output_3d( av, do3d(av,if), found, local_pf, &
831	nzb_do, nzt_do )
832	resorted = .TRUE.
833	ENDIF
834
835	IF ( .NOT. found ) THEN
836	message_string = 'no output available for: ' // &
837	TRIM( do3d(av,if) )
838	CALL message( 'data_output_3d', 'PA0182', 0, 0, 0, 6, 0 )
839	ENDIF
840
841	END SELECT
842
843	!
844	!-- Resort the array to be output, if not done above
845	IF ( .NOT. resorted ) THEN
846	DO i = nxl, nxr
847	DO j = nys, nyn
848	DO k = nzb_do, nzt_do
849	local_pf(i,j,k) = MERGE( &
850	to_be_resorted(k,j,i), &
851	REAL( fill_value, KIND = wp ), &
852	BTEST( wall_flags_0(k,j,i), flag_nr ) )
853	ENDDO
854	ENDDO
855	ENDDO
856	ENDIF
857
858	!
859	!-- Output of the 3D-array
860	#if defined( __parallel )
861	IF ( netcdf_data_format < 5 ) THEN
862	!
863	!-- Non-parallel netCDF output. Data is output in parallel in
864	!-- FORTRAN binary format here, and later collected into one file by
865	!-- combine_plot_fields
866	IF ( myid == 0 ) THEN
867	WRITE ( 30 ) time_since_reference_point, &
868	do3d_time_count(av), av
869	ENDIF
870	DO i = 0, io_blocks-1
871	IF ( i == io_group ) THEN
872	WRITE ( 30 ) nxl, nxr, nys, nyn, nzb_do, nzt_do
873	WRITE ( 30 ) local_pf(:,:,nzb_do:nzt_do)
874	ENDIF
875
876	CALL MPI_BARRIER( comm2d, ierr )
877
878	ENDDO
879
880	ELSE
881	#if defined( __netcdf )
882	!
883	!-- Parallel output in netCDF4/HDF5 format.
884	! IF ( nxr == nx .AND. nyn /= ny ) THEN
885	! nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,if), &
886	! local_pf(nxl:nxr+1,nys:nyn,nzb_do:nzt_do), &
887	! start = (/ nxl+1, nys+1, nzb_do+1, do3d_time_count(av) /), &
888	! count = (/ nxr-nxl+2, nyn-nys+1, nzt_do-nzb_do+1, 1 /) )
889	! ELSEIF ( nxr /= nx .AND. nyn == ny ) THEN
890	! nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,if), &
891	! local_pf(nxl:nxr,nys:nyn+1,nzb_do:nzt_do), &
892	! start = (/ nxl+1, nys+1, nzb_do+1, do3d_time_count(av) /), &
893	! count = (/ nxr-nxl+1, nyn-nys+2, nzt_do-nzb_do+1, 1 /) )
894	! ELSEIF ( nxr == nx .AND. nyn == ny ) THEN
895	! nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,if), &
896	! local_pf(nxl:nxr+1,nys:nyn+1,nzb_do:nzt_do ), &
897	! start = (/ nxl+1, nys+1, nzb_do+1, do3d_time_count(av) /), &
898	! count = (/ nxr-nxl+2, nyn-nys+2, nzt_do-nzb_do+1, 1 /) )
899	! ELSE
900	nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,if), &
901	local_pf(nxl:nxr,nys:nyn,nzb_do:nzt_do), &
902	start = (/ nxl+1, nys+1, nzb_do+1, do3d_time_count(av) /), &
903	count = (/ nxr-nxl+1, nyn-nys+1, nzt_do-nzb_do+1, 1 /) )
904	! ENDIF
905	CALL netcdf_handle_error( 'data_output_3d', 386 )
906	#endif
907	ENDIF
908	#else
909	#if defined( __netcdf )
910	nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,if), &
911	local_pf(nxl:nxr+1,nys:nyn+1,nzb_do:nzt_do), &
912	start = (/ 1, 1, 1, do3d_time_count(av) /), &
913	count = (/ nx+1, ny+1, nzt_do-nzb_do+1, 1 /) )
914	CALL netcdf_handle_error( 'data_output_3d', 446 )
915	#endif
916	#endif
917
918	if = if + 1
919
920	!
921	!-- Deallocate temporary array
922	DEALLOCATE ( local_pf )
923
924	ENDDO
925
926	CALL cpu_log( log_point(14), 'data_output_3d', 'stop' )
927
928	!
929	!-- Formats.
930	3300 FORMAT ('variable ',I4,' file=',A,' filetype=unformatted skip=',I12/ &
931	'label = ',A,A)
932
933	END SUBROUTINE data_output_3d

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