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source: palm/trunk/SOURCE/data_output_3d.f90 @ 757

Last change on this file since 757 was 728, checked in by suehring, 14 years ago
Last commit documented.
Property svn:keywords set to `Id`
File size: 15.9 KB

Rev	Line
[1]	1	SUBROUTINE data_output_3d( av )
	2
	3	!------------------------------------------------------------------------------!
[254]	4	! Current revisions:
[1]	5	! -----------------
[674]	6	!
[392]	7	! Former revisions:
	8	! -----------------
	9	! $Id: data_output_3d.f90 728 2011-04-20 20:06:59Z helmke $
	10	!
[728]	11	! 727 2011-04-20 20:05:25Z suehring
	12	! Exchange ghost layers also for p_av.
	13	!
[726]	14	! 725 2011-04-11 09:37:01Z suehring
	15	! Exchange ghost layers for p regardless of used pressure solver (except SOR).
	16	!
[692]	17	! 691 2011-03-04 08:45:30Z maronga
	18	! Replaced simulated_time by time_since_reference_point
	19	!
[674]	20	! 673 2011-01-18 16:19:48Z suehring
	21	! When using Multigrid or SOR solver an additional CALL exchange_horiz is
	22	! is needed for pressure output.
	23	!
[668]	24	! 667 2010-12-23 12:06:00Z suehring/gryschka
	25	! nxl-1, nxr+1, nys-1, nyn+1 replaced by nxlg, nxrg, nysg, nyng in loops and
	26	! allocation of arrays. Calls of exchange_horiz are modified.
	27	! Skip-value skip_do_avs changed to a dynamic adaption of ghost points.
	28	!
[647]	29	! 646 2010-12-15 13:03:52Z raasch
	30	! bugfix: missing define statements for netcdf added
	31	!
[494]	32	! 493 2010-03-01 08:30:24Z raasch
	33	! NetCDF4 support (parallel output)
	34	!
[392]	35	! 355 2009-07-17 01:03:01Z letzel
[291]	36	! simulated_time in NetCDF output replaced by time_since_reference_point.
[263]	37	! Output of NetCDF messages with aid of message handling routine.
[254]	38	! Output of messages replaced by message handling routine.
[355]	39	! Bugfix: to_be_resorted => s_av for time-averaged scalars
[1]	40	!
[98]	41	! 96 2007-06-04 08:07:41Z raasch
	42	! Output of density and salinity
	43	!
[77]	44	! 75 2007-03-22 09:54:05Z raasch
	45	! 2nd+3rd argument removed from exchange horiz
	46	!
[3]	47	! RCS Log replace by Id keyword, revision history cleaned up
	48	!
[1]	49	! Revision 1.3 2006/06/02 15:18:59 raasch
	50	! +argument "found", -argument grid in call of routine user_data_output_3d
	51	!
	52	! Revision 1.2 2006/02/23 10:23:07 raasch
	53	! Former subroutine plot_3d renamed data_output_3d, pl.. renamed do..,
	54	! .._anz renamed .._n,
	55	! output extended to (almost) all quantities, output of user-defined quantities
	56	!
	57	! Revision 1.1 1997/09/03 06:29:36 raasch
	58	! Initial revision
	59	!
	60	!
	61	! Description:
	62	! ------------
	63	! Output of the 3D-arrays in NetCDF and/or AVS format.
	64	!------------------------------------------------------------------------------!
	65
	66	USE array_kind
	67	USE arrays_3d
	68	USE averaging
	69	USE cloud_parameters
	70	USE control_parameters
	71	USE cpulog
	72	USE indices
	73	USE interfaces
	74	USE netcdf_control
	75	USE particle_attributes
	76	USE pegrid
	77
	78	IMPLICIT NONE
	79
	80	CHARACTER (LEN=9) :: simulated_time_mod
	81
[559]	82	INTEGER :: av, i, if, j, k, n, pos, prec, psi
[1]	83
	84	LOGICAL :: found, resorted
	85
	86	REAL :: mean_r, s_r3, s_r4
	87
	88	REAL(spk), DIMENSION(:,:,:), ALLOCATABLE :: local_pf
	89
	90	REAL, DIMENSION(:,:,:), POINTER :: to_be_resorted
	91
	92	!
	93	!-- Return, if nothing to output
	94	IF ( do3d_no(av) == 0 ) RETURN
	95
	96	CALL cpu_log (log_point(14),'data_output_3d','start')
	97
	98	!
	99	!-- Open output file.
	100	!-- Also creates coordinate and fld-file for AVS.
[493]	101	!-- For classic or 64bit NetCDF output or output of other (old) data formats,
	102	!-- for a run on more than one PE, each PE opens its own file and
[1]	103	!-- writes the data of its subdomain in binary format (regardless of the format
	104	!-- the user has requested). After the run, these files are combined to one
	105	!-- file by combine_plot_fields in the format requested by the user (netcdf
[493]	106	!-- and/or avs).
	107	!-- For NetCDF4/HDF5 output, data is written in parallel into one file.
	108	IF ( netcdf_output ) THEN
	109	IF ( netcdf_data_format < 3 ) THEN
	110	CALL check_open( 30 )
	111	IF ( myid == 0 ) CALL check_open( 106+av*10 )
	112	ELSE
	113	CALL check_open( 106+av*10 )
	114	ENDIF
	115	ELSE
	116	IF ( avs_output .OR. ( numprocs > 1 ) ) CALL check_open( 30 )
	117	ENDIF
[1]	118
	119	!
	120	!-- Allocate a temporary array with the desired output dimensions.
[667]	121	ALLOCATE( local_pf(nxlg:nxrg,nysg:nyng,nzb:nz_do3d) )
[1]	122
	123	!
	124	!-- Update the NetCDF time axis
	125	#if defined( __netcdf )
[493]	126	IF ( myid == 0 .OR. netcdf_data_format > 2 ) THEN
	127	do3d_time_count(av) = do3d_time_count(av) + 1
	128	IF ( netcdf_output ) THEN
	129	nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_time_3d(av), &
	130	(/ time_since_reference_point /), &
	131	start = (/ do3d_time_count(av) /), &
	132	count = (/ 1 /) )
	133	CALL handle_netcdf_error( 'data_output_3d', 376 )
	134	ENDIF
[1]	135	ENDIF
	136	#endif
	137
	138	!
	139	!-- Loop over all variables to be written.
	140	if = 1
	141
	142	DO WHILE ( do3d(av,if)(1:1) /= ' ' )
	143	!
	144	!-- Set the precision for data compression.
	145	IF ( do3d_compress ) THEN
	146	DO i = 1, 100
	147	IF ( plot_3d_precision(i)%variable == do3d(av,if) ) THEN
	148	prec = plot_3d_precision(i)%precision
	149	EXIT
	150	ENDIF
	151	ENDDO
	152	ENDIF
	153
	154	!
	155	!-- Store the array chosen on the temporary array.
	156	resorted = .FALSE.
	157	SELECT CASE ( TRIM( do3d(av,if) ) )
	158
	159	CASE ( 'e' )
	160	IF ( av == 0 ) THEN
	161	to_be_resorted => e
	162	ELSE
	163	to_be_resorted => e_av
	164	ENDIF
	165
	166	CASE ( 'p' )
	167	IF ( av == 0 ) THEN
[727]	168	IF ( psolver /= 'sor' ) CALL exchange_horiz( p, nbgp )
[1]	169	to_be_resorted => p
	170	ELSE
[727]	171	IF ( psolver /= 'sor' ) CALL exchange_horiz( p_av, nbgp )
[1]	172	to_be_resorted => p_av
	173	ENDIF
	174
	175	CASE ( 'pc' ) ! particle concentration (requires ghostpoint exchange)
	176	IF ( av == 0 ) THEN
	177	tend = prt_count
[667]	178	CALL exchange_horiz( tend, nbgp )
	179	DO i = nxlg, nxrg
	180	DO j = nysg, nyng
[1]	181	DO k = nzb, nz_do3d
	182	local_pf(i,j,k) = tend(k,j,i)
	183	ENDDO
	184	ENDDO
	185	ENDDO
	186	resorted = .TRUE.
	187	ELSE
[667]	188	CALL exchange_horiz( pc_av, nbgp )
[1]	189	to_be_resorted => pc_av
	190	ENDIF
	191
	192	CASE ( 'pr' ) ! mean particle radius
	193	IF ( av == 0 ) THEN
	194	DO i = nxl, nxr
	195	DO j = nys, nyn
	196	DO k = nzb, nzt+1
	197	psi = prt_start_index(k,j,i)
	198	s_r3 = 0.0
	199	s_r4 = 0.0
	200	DO n = psi, psi+prt_count(k,j,i)-1
	201	s_r3 = s_r3 + particles(n)%radius**3
	202	s_r4 = s_r4 + particles(n)%radius**4
	203	ENDDO
	204	IF ( s_r3 /= 0.0 ) THEN
	205	mean_r = s_r4 / s_r3
	206	ELSE
	207	mean_r = 0.0
	208	ENDIF
	209	tend(k,j,i) = mean_r
	210	ENDDO
	211	ENDDO
	212	ENDDO
[667]	213	CALL exchange_horiz( tend, nbgp )
	214	DO i = nxlg, nxrg
	215	DO j = nysg, nyng
[1]	216	DO k = nzb, nzt+1
	217	local_pf(i,j,k) = tend(k,j,i)
	218	ENDDO
	219	ENDDO
	220	ENDDO
	221	resorted = .TRUE.
	222	ELSE
[667]	223	CALL exchange_horiz( pr_av, nbgp )
[1]	224	to_be_resorted => pr_av
	225	ENDIF
	226
	227	CASE ( 'pt' )
	228	IF ( av == 0 ) THEN
	229	IF ( .NOT. cloud_physics ) THEN
	230	to_be_resorted => pt
	231	ELSE
[667]	232	DO i = nxlg, nxrg
	233	DO j = nysg, nyng
[1]	234	DO k = nzb, nz_do3d
	235	local_pf(i,j,k) = pt(k,j,i) + l_d_cp * &
	236	pt_d_t(k) * &
	237	ql(k,j,i)
	238	ENDDO
	239	ENDDO
	240	ENDDO
	241	resorted = .TRUE.
	242	ENDIF
	243	ELSE
	244	to_be_resorted => pt_av
	245	ENDIF
	246
	247	CASE ( 'q' )
	248	IF ( av == 0 ) THEN
	249	to_be_resorted => q
	250	ELSE
	251	to_be_resorted => q_av
	252	ENDIF
[691]	253
[1]	254	CASE ( 'ql' )
	255	IF ( av == 0 ) THEN
	256	to_be_resorted => ql
	257	ELSE
	258	to_be_resorted => ql_av
	259	ENDIF
	260
	261	CASE ( 'ql_c' )
	262	IF ( av == 0 ) THEN
	263	to_be_resorted => ql_c
	264	ELSE
	265	to_be_resorted => ql_c_av
	266	ENDIF
	267
	268	CASE ( 'ql_v' )
	269	IF ( av == 0 ) THEN
	270	to_be_resorted => ql_v
	271	ELSE
	272	to_be_resorted => ql_v_av
	273	ENDIF
	274
	275	CASE ( 'ql_vp' )
	276	IF ( av == 0 ) THEN
	277	to_be_resorted => ql_vp
	278	ELSE
	279	to_be_resorted => ql_vp_av
	280	ENDIF
	281
	282	CASE ( 'qv' )
	283	IF ( av == 0 ) THEN
[667]	284	DO i = nxlg, nxrg
	285	DO j = nysg, nyng
[1]	286	DO k = nzb, nz_do3d
	287	local_pf(i,j,k) = q(k,j,i) - ql(k,j,i)
	288	ENDDO
	289	ENDDO
	290	ENDDO
	291	resorted = .TRUE.
	292	ELSE
	293	to_be_resorted => qv_av
	294	ENDIF
	295
[96]	296	CASE ( 'rho' )
	297	IF ( av == 0 ) THEN
	298	to_be_resorted => rho
	299	ELSE
	300	to_be_resorted => rho_av
	301	ENDIF
[691]	302
[1]	303	CASE ( 's' )
	304	IF ( av == 0 ) THEN
	305	to_be_resorted => q
	306	ELSE
[355]	307	to_be_resorted => s_av
[1]	308	ENDIF
[691]	309
[96]	310	CASE ( 'sa' )
	311	IF ( av == 0 ) THEN
	312	to_be_resorted => sa
	313	ELSE
	314	to_be_resorted => sa_av
	315	ENDIF
[691]	316
[1]	317	CASE ( 'u' )
	318	IF ( av == 0 ) THEN
	319	to_be_resorted => u
	320	ELSE
	321	to_be_resorted => u_av
	322	ENDIF
	323
	324	CASE ( 'v' )
	325	IF ( av == 0 ) THEN
	326	to_be_resorted => v
	327	ELSE
	328	to_be_resorted => v_av
	329	ENDIF
	330
	331	CASE ( 'vpt' )
	332	IF ( av == 0 ) THEN
	333	to_be_resorted => vpt
	334	ELSE
	335	to_be_resorted => vpt_av
	336	ENDIF
	337
	338	CASE ( 'w' )
	339	IF ( av == 0 ) THEN
	340	to_be_resorted => w
	341	ELSE
	342	to_be_resorted => w_av
	343	ENDIF
	344
	345	CASE DEFAULT
	346	!
	347	!-- User defined quantity
	348	CALL user_data_output_3d( av, do3d(av,if), found, local_pf, &
	349	nz_do3d )
	350	resorted = .TRUE.
	351
[254]	352	IF ( .NOT. found ) THEN
[274]	353	message_string = 'no output available for: ' // &
	354	TRIM( do3d(av,if) )
[254]	355	CALL message( 'data_output_3d', 'PA0182', 0, 0, 0, 6, 0 )
[1]	356	ENDIF
	357
	358	END SELECT
	359
	360	!
	361	!-- Resort the array to be output, if not done above
	362	IF ( .NOT. resorted ) THEN
[667]	363	DO i = nxlg, nxrg
	364	DO j = nysg, nyng
[1]	365	DO k = nzb, nz_do3d
	366	local_pf(i,j,k) = to_be_resorted(k,j,i)
	367	ENDDO
	368	ENDDO
	369	ENDDO
	370	ENDIF
	371
	372	!
	373	!-- Output of the volume data information for the AVS-FLD-file.
	374	do3d_avs_n = do3d_avs_n + 1
	375	IF ( myid == 0 .AND. avs_output ) THEN
	376	!
	377	!-- AVS-labels must not contain any colons. Hence they must be removed
	378	!-- from the time character string.
	379	simulated_time_mod = simulated_time_chr
	380	DO WHILE ( SCAN( simulated_time_mod, ':' ) /= 0 )
	381	pos = SCAN( simulated_time_mod, ':' )
	382	simulated_time_mod(pos:pos) = '/'
	383	ENDDO
	384
	385	IF ( av == 0 ) THEN
	386	WRITE ( 33, 3300 ) do3d_avs_n, TRIM( avs_data_file ), &
	387	skip_do_avs, TRIM( do3d(av,if) ), &
	388	TRIM( simulated_time_mod )
	389	ELSE
	390	WRITE ( 33, 3300 ) do3d_avs_n, TRIM( avs_data_file ), &
	391	skip_do_avs, TRIM( do3d(av,if) ) // &
	392	' averaged', TRIM( simulated_time_mod )
	393	ENDIF
	394	!
	395	!-- Determine the Skip-value for the next array. Record end and start
	396	!-- require 4 byte each.
[667]	397	skip_do_avs = skip_do_avs + ( ((nx+2nbgp)(ny+2nbgp)(nz_do3d+1)) * 4 + 8 )
[1]	398	ENDIF
	399
	400	!
	401	!-- Output of the 3D-array. (compressed/uncompressed)
	402	IF ( do3d_compress ) THEN
	403	!
	404	!-- Compression, output of compression information on FLD-file and output
	405	!-- of compressed data.
[559]	406	CALL write_compressed( local_pf, 30, 33, myid, nxl, nxr, nyn, nys, &
[667]	407	nzb, nz_do3d, prec, nbgp )
[1]	408	ELSE
	409	!
	410	!-- Uncompressed output.
	411	#if defined( __parallel )
[493]	412	IF ( netcdf_output ) THEN
	413	IF ( netcdf_data_format < 3 ) THEN
	414	!
	415	!-- Classic or 64bit format. Data is output in parallel in FORTRAN
	416	!-- binary format here, and later collected into one file by
	417	!-- combine_plot_fields
	418	IF ( myid == 0 ) THEN
[691]	419	WRITE ( 30 ) time_since_reference_point, &
	420	do3d_time_count(av), av
[493]	421	ENDIF
[667]	422	WRITE ( 30 ) nxlg, nxrg, nysg, nyng, nzb, nz_do3d
[559]	423	WRITE ( 30 ) local_pf
	424
[493]	425	ELSE
[646]	426	#if defined( __netcdf )
[493]	427	!
	428	!-- Output in NetCDF4/HDF5 format.
	429	!-- Do not output redundant ghost point data except for the
	430	!-- boundaries of the total domain.
	431	IF ( nxr == nx .AND. nyn /= ny ) THEN
	432	nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,if), &
[667]	433	local_pf(nxl:nxrg,nys:nyn,nzb:nz_do3d), &
[493]	434	start = (/ nxl+1, nys+1, nzb+1, do3d_time_count(av) /), &
[667]	435	count = (/ nxr-nxl+1+nbgp, nyn-nys+1, nz_do3d-nzb+1, 1 /) )
[493]	436	ELSEIF ( nxr /= nx .AND. nyn == ny ) THEN
	437	nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,if), &
[667]	438	local_pf(nxl:nxr,nys:nyng,nzb:nz_do3d), &
[493]	439	start = (/ nxl+1, nys+1, nzb+1, do3d_time_count(av) /), &
[667]	440	count = (/ nxr-nxl+1, nyn-nys+1+nbgp, nz_do3d-nzb+1, 1 /) )
[493]	441	ELSEIF ( nxr == nx .AND. nyn == ny ) THEN
	442	nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,if), &
[667]	443	local_pf(nxl:nxrg,nys:nyng,nzb:nz_do3d), &
[493]	444	start = (/ nxl+1, nys+1, nzb+1, do3d_time_count(av) /), &
[667]	445	count = (/ nxr-nxl+1+nbgp, nyn-nys+1+nbgp, nz_do3d-nzb+1, 1 /) )
[493]	446	ELSE
	447	nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,if), &
	448	local_pf(nxl:nxr,nys:nyn,nzb:nz_do3d), &
	449	start = (/ nxl+1, nys+1, nzb+1, do3d_time_count(av) /), &
	450	count = (/ nxr-nxl+1, nyn-nys+1, nz_do3d-nzb+1, 1 /) )
	451	ENDIF
	452	CALL handle_netcdf_error( 'data_output_3d', 386 )
[646]	453	#endif
[493]	454	ENDIF
[1]	455	ENDIF
	456	#else
	457	IF ( avs_output ) THEN
	458	WRITE ( 30 ) local_pf(nxl:nxr+1,nys:nyn+1,:)
	459	ENDIF
	460	#if defined( __netcdf )
	461	IF ( netcdf_output ) THEN
[493]	462
	463	nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,if), &
	464	local_pf(nxl:nxr+1,nys:nyn+1,nzb:nz_do3d), &
	465	start = (/ 1, 1, 1, do3d_time_count(av) /), &
	466	count = (/ nx+2, ny+2, nz_do3d-nzb+1, 1 /) )
	467	CALL handle_netcdf_error( 'data_output_3d', 446 )
	468
[1]	469	ENDIF
	470	#endif
	471	#endif
	472	ENDIF
	473
	474	if = if + 1
	475
	476	ENDDO
	477
	478	!
	479	!-- Deallocate temporary array.
	480	DEALLOCATE( local_pf )
	481
	482
	483	CALL cpu_log (log_point(14),'data_output_3d','stop','nobarrier')
	484
	485	!
	486	!-- Formats.
	487	3300 FORMAT ('variable ',I4,' file=',A,' filetype=unformatted skip=',I12/ &
	488	'label = ',A,A)
	489
	490	END SUBROUTINE data_output_3d

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