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source: palm/trunk/SOURCE/data_output_3d.f90 @ 712

Last change on this file since 712 was 692, checked in by maronga, 14 years ago
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Rev	Line
[1]	1	SUBROUTINE data_output_3d( av )
	2
	3	!------------------------------------------------------------------------------!
[254]	4	! Current revisions:
[1]	5	! -----------------
[674]	6	!
[392]	7	! Former revisions:
	8	! -----------------
	9	! $Id: data_output_3d.f90 692 2011-03-04 08:52:15Z raasch $
	10	!
[692]	11	! 691 2011-03-04 08:45:30Z maronga
	12	! Replaced simulated_time by time_since_reference_point
	13	!
[674]	14	! 673 2011-01-18 16:19:48Z suehring
	15	! When using Multigrid or SOR solver an additional CALL exchange_horiz is
	16	! is needed for pressure output.
	17	!
[668]	18	! 667 2010-12-23 12:06:00Z suehring/gryschka
	19	! nxl-1, nxr+1, nys-1, nyn+1 replaced by nxlg, nxrg, nysg, nyng in loops and
	20	! allocation of arrays. Calls of exchange_horiz are modified.
	21	! Skip-value skip_do_avs changed to a dynamic adaption of ghost points.
	22	!
[647]	23	! 646 2010-12-15 13:03:52Z raasch
	24	! bugfix: missing define statements for netcdf added
	25	!
[494]	26	! 493 2010-03-01 08:30:24Z raasch
	27	! NetCDF4 support (parallel output)
	28	!
[392]	29	! 355 2009-07-17 01:03:01Z letzel
[291]	30	! simulated_time in NetCDF output replaced by time_since_reference_point.
[263]	31	! Output of NetCDF messages with aid of message handling routine.
[254]	32	! Output of messages replaced by message handling routine.
[355]	33	! Bugfix: to_be_resorted => s_av for time-averaged scalars
[1]	34	!
[98]	35	! 96 2007-06-04 08:07:41Z raasch
	36	! Output of density and salinity
	37	!
[77]	38	! 75 2007-03-22 09:54:05Z raasch
	39	! 2nd+3rd argument removed from exchange horiz
	40	!
[3]	41	! RCS Log replace by Id keyword, revision history cleaned up
	42	!
[1]	43	! Revision 1.3 2006/06/02 15:18:59 raasch
	44	! +argument "found", -argument grid in call of routine user_data_output_3d
	45	!
	46	! Revision 1.2 2006/02/23 10:23:07 raasch
	47	! Former subroutine plot_3d renamed data_output_3d, pl.. renamed do..,
	48	! .._anz renamed .._n,
	49	! output extended to (almost) all quantities, output of user-defined quantities
	50	!
	51	! Revision 1.1 1997/09/03 06:29:36 raasch
	52	! Initial revision
	53	!
	54	!
	55	! Description:
	56	! ------------
	57	! Output of the 3D-arrays in NetCDF and/or AVS format.
	58	!------------------------------------------------------------------------------!
	59
	60	USE array_kind
	61	USE arrays_3d
	62	USE averaging
	63	USE cloud_parameters
	64	USE control_parameters
	65	USE cpulog
	66	USE indices
	67	USE interfaces
	68	USE netcdf_control
	69	USE particle_attributes
	70	USE pegrid
	71
	72	IMPLICIT NONE
	73
	74	CHARACTER (LEN=9) :: simulated_time_mod
	75
[559]	76	INTEGER :: av, i, if, j, k, n, pos, prec, psi
[1]	77
	78	LOGICAL :: found, resorted
	79
	80	REAL :: mean_r, s_r3, s_r4
	81
	82	REAL(spk), DIMENSION(:,:,:), ALLOCATABLE :: local_pf
	83
	84	REAL, DIMENSION(:,:,:), POINTER :: to_be_resorted
	85
	86	!
	87	!-- Return, if nothing to output
	88	IF ( do3d_no(av) == 0 ) RETURN
	89
	90	CALL cpu_log (log_point(14),'data_output_3d','start')
	91
	92	!
	93	!-- Open output file.
	94	!-- Also creates coordinate and fld-file for AVS.
[493]	95	!-- For classic or 64bit NetCDF output or output of other (old) data formats,
	96	!-- for a run on more than one PE, each PE opens its own file and
[1]	97	!-- writes the data of its subdomain in binary format (regardless of the format
	98	!-- the user has requested). After the run, these files are combined to one
	99	!-- file by combine_plot_fields in the format requested by the user (netcdf
[493]	100	!-- and/or avs).
	101	!-- For NetCDF4/HDF5 output, data is written in parallel into one file.
	102	IF ( netcdf_output ) THEN
	103	IF ( netcdf_data_format < 3 ) THEN
	104	CALL check_open( 30 )
	105	IF ( myid == 0 ) CALL check_open( 106+av*10 )
	106	ELSE
	107	CALL check_open( 106+av*10 )
	108	ENDIF
	109	ELSE
	110	IF ( avs_output .OR. ( numprocs > 1 ) ) CALL check_open( 30 )
	111	ENDIF
[1]	112
	113	!
	114	!-- Allocate a temporary array with the desired output dimensions.
[667]	115	ALLOCATE( local_pf(nxlg:nxrg,nysg:nyng,nzb:nz_do3d) )
[1]	116
	117	!
	118	!-- Update the NetCDF time axis
	119	#if defined( __netcdf )
[493]	120	IF ( myid == 0 .OR. netcdf_data_format > 2 ) THEN
	121	do3d_time_count(av) = do3d_time_count(av) + 1
	122	IF ( netcdf_output ) THEN
	123	nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_time_3d(av), &
	124	(/ time_since_reference_point /), &
	125	start = (/ do3d_time_count(av) /), &
	126	count = (/ 1 /) )
	127	CALL handle_netcdf_error( 'data_output_3d', 376 )
	128	ENDIF
[1]	129	ENDIF
	130	#endif
	131
	132	!
	133	!-- Loop over all variables to be written.
	134	if = 1
	135
	136	DO WHILE ( do3d(av,if)(1:1) /= ' ' )
	137	!
	138	!-- Set the precision for data compression.
	139	IF ( do3d_compress ) THEN
	140	DO i = 1, 100
	141	IF ( plot_3d_precision(i)%variable == do3d(av,if) ) THEN
	142	prec = plot_3d_precision(i)%precision
	143	EXIT
	144	ENDIF
	145	ENDDO
	146	ENDIF
	147
	148	!
	149	!-- Store the array chosen on the temporary array.
	150	resorted = .FALSE.
	151	SELECT CASE ( TRIM( do3d(av,if) ) )
	152
	153	CASE ( 'e' )
	154	IF ( av == 0 ) THEN
	155	to_be_resorted => e
	156	ELSE
	157	to_be_resorted => e_av
	158	ENDIF
	159
	160	CASE ( 'p' )
[673]	161	IF ( psolver == 'multigrid' .OR. psolver == 'sor' ) &
	162	CALL exchange_horiz( p, nbgp )
[1]	163	IF ( av == 0 ) THEN
	164	to_be_resorted => p
	165	ELSE
	166	to_be_resorted => p_av
	167	ENDIF
	168
	169	CASE ( 'pc' ) ! particle concentration (requires ghostpoint exchange)
	170	IF ( av == 0 ) THEN
	171	tend = prt_count
[667]	172	CALL exchange_horiz( tend, nbgp )
	173	DO i = nxlg, nxrg
	174	DO j = nysg, nyng
[1]	175	DO k = nzb, nz_do3d
	176	local_pf(i,j,k) = tend(k,j,i)
	177	ENDDO
	178	ENDDO
	179	ENDDO
	180	resorted = .TRUE.
	181	ELSE
[667]	182	CALL exchange_horiz( pc_av, nbgp )
[1]	183	to_be_resorted => pc_av
	184	ENDIF
	185
	186	CASE ( 'pr' ) ! mean particle radius
	187	IF ( av == 0 ) THEN
	188	DO i = nxl, nxr
	189	DO j = nys, nyn
	190	DO k = nzb, nzt+1
	191	psi = prt_start_index(k,j,i)
	192	s_r3 = 0.0
	193	s_r4 = 0.0
	194	DO n = psi, psi+prt_count(k,j,i)-1
	195	s_r3 = s_r3 + particles(n)%radius**3
	196	s_r4 = s_r4 + particles(n)%radius**4
	197	ENDDO
	198	IF ( s_r3 /= 0.0 ) THEN
	199	mean_r = s_r4 / s_r3
	200	ELSE
	201	mean_r = 0.0
	202	ENDIF
	203	tend(k,j,i) = mean_r
	204	ENDDO
	205	ENDDO
	206	ENDDO
[667]	207	CALL exchange_horiz( tend, nbgp )
	208	DO i = nxlg, nxrg
	209	DO j = nysg, nyng
[1]	210	DO k = nzb, nzt+1
	211	local_pf(i,j,k) = tend(k,j,i)
	212	ENDDO
	213	ENDDO
	214	ENDDO
	215	resorted = .TRUE.
	216	ELSE
[667]	217	CALL exchange_horiz( pr_av, nbgp )
[1]	218	to_be_resorted => pr_av
	219	ENDIF
	220
	221	CASE ( 'pt' )
	222	IF ( av == 0 ) THEN
	223	IF ( .NOT. cloud_physics ) THEN
	224	to_be_resorted => pt
	225	ELSE
[667]	226	DO i = nxlg, nxrg
	227	DO j = nysg, nyng
[1]	228	DO k = nzb, nz_do3d
	229	local_pf(i,j,k) = pt(k,j,i) + l_d_cp * &
	230	pt_d_t(k) * &
	231	ql(k,j,i)
	232	ENDDO
	233	ENDDO
	234	ENDDO
	235	resorted = .TRUE.
	236	ENDIF
	237	ELSE
	238	to_be_resorted => pt_av
	239	ENDIF
	240
	241	CASE ( 'q' )
	242	IF ( av == 0 ) THEN
	243	to_be_resorted => q
	244	ELSE
	245	to_be_resorted => q_av
	246	ENDIF
[691]	247
[1]	248	CASE ( 'ql' )
	249	IF ( av == 0 ) THEN
	250	to_be_resorted => ql
	251	ELSE
	252	to_be_resorted => ql_av
	253	ENDIF
	254
	255	CASE ( 'ql_c' )
	256	IF ( av == 0 ) THEN
	257	to_be_resorted => ql_c
	258	ELSE
	259	to_be_resorted => ql_c_av
	260	ENDIF
	261
	262	CASE ( 'ql_v' )
	263	IF ( av == 0 ) THEN
	264	to_be_resorted => ql_v
	265	ELSE
	266	to_be_resorted => ql_v_av
	267	ENDIF
	268
	269	CASE ( 'ql_vp' )
	270	IF ( av == 0 ) THEN
	271	to_be_resorted => ql_vp
	272	ELSE
	273	to_be_resorted => ql_vp_av
	274	ENDIF
	275
	276	CASE ( 'qv' )
	277	IF ( av == 0 ) THEN
[667]	278	DO i = nxlg, nxrg
	279	DO j = nysg, nyng
[1]	280	DO k = nzb, nz_do3d
	281	local_pf(i,j,k) = q(k,j,i) - ql(k,j,i)
	282	ENDDO
	283	ENDDO
	284	ENDDO
	285	resorted = .TRUE.
	286	ELSE
	287	to_be_resorted => qv_av
	288	ENDIF
	289
[96]	290	CASE ( 'rho' )
	291	IF ( av == 0 ) THEN
	292	to_be_resorted => rho
	293	ELSE
	294	to_be_resorted => rho_av
	295	ENDIF
[691]	296
[1]	297	CASE ( 's' )
	298	IF ( av == 0 ) THEN
	299	to_be_resorted => q
	300	ELSE
[355]	301	to_be_resorted => s_av
[1]	302	ENDIF
[691]	303
[96]	304	CASE ( 'sa' )
	305	IF ( av == 0 ) THEN
	306	to_be_resorted => sa
	307	ELSE
	308	to_be_resorted => sa_av
	309	ENDIF
[691]	310
[1]	311	CASE ( 'u' )
	312	IF ( av == 0 ) THEN
	313	to_be_resorted => u
	314	ELSE
	315	to_be_resorted => u_av
	316	ENDIF
	317
	318	CASE ( 'v' )
	319	IF ( av == 0 ) THEN
	320	to_be_resorted => v
	321	ELSE
	322	to_be_resorted => v_av
	323	ENDIF
	324
	325	CASE ( 'vpt' )
	326	IF ( av == 0 ) THEN
	327	to_be_resorted => vpt
	328	ELSE
	329	to_be_resorted => vpt_av
	330	ENDIF
	331
	332	CASE ( 'w' )
	333	IF ( av == 0 ) THEN
	334	to_be_resorted => w
	335	ELSE
	336	to_be_resorted => w_av
	337	ENDIF
	338
	339	CASE DEFAULT
	340	!
	341	!-- User defined quantity
	342	CALL user_data_output_3d( av, do3d(av,if), found, local_pf, &
	343	nz_do3d )
	344	resorted = .TRUE.
	345
[254]	346	IF ( .NOT. found ) THEN
[274]	347	message_string = 'no output available for: ' // &
	348	TRIM( do3d(av,if) )
[254]	349	CALL message( 'data_output_3d', 'PA0182', 0, 0, 0, 6, 0 )
[1]	350	ENDIF
	351
	352	END SELECT
	353
	354	!
	355	!-- Resort the array to be output, if not done above
	356	IF ( .NOT. resorted ) THEN
[667]	357	DO i = nxlg, nxrg
	358	DO j = nysg, nyng
[1]	359	DO k = nzb, nz_do3d
	360	local_pf(i,j,k) = to_be_resorted(k,j,i)
	361	ENDDO
	362	ENDDO
	363	ENDDO
	364	ENDIF
	365
	366	!
	367	!-- Output of the volume data information for the AVS-FLD-file.
	368	do3d_avs_n = do3d_avs_n + 1
	369	IF ( myid == 0 .AND. avs_output ) THEN
	370	!
	371	!-- AVS-labels must not contain any colons. Hence they must be removed
	372	!-- from the time character string.
	373	simulated_time_mod = simulated_time_chr
	374	DO WHILE ( SCAN( simulated_time_mod, ':' ) /= 0 )
	375	pos = SCAN( simulated_time_mod, ':' )
	376	simulated_time_mod(pos:pos) = '/'
	377	ENDDO
	378
	379	IF ( av == 0 ) THEN
	380	WRITE ( 33, 3300 ) do3d_avs_n, TRIM( avs_data_file ), &
	381	skip_do_avs, TRIM( do3d(av,if) ), &
	382	TRIM( simulated_time_mod )
	383	ELSE
	384	WRITE ( 33, 3300 ) do3d_avs_n, TRIM( avs_data_file ), &
	385	skip_do_avs, TRIM( do3d(av,if) ) // &
	386	' averaged', TRIM( simulated_time_mod )
	387	ENDIF
	388	!
	389	!-- Determine the Skip-value for the next array. Record end and start
	390	!-- require 4 byte each.
[667]	391	skip_do_avs = skip_do_avs + ( ((nx+2nbgp)(ny+2nbgp)(nz_do3d+1)) * 4 + 8 )
[1]	392	ENDIF
	393
	394	!
	395	!-- Output of the 3D-array. (compressed/uncompressed)
	396	IF ( do3d_compress ) THEN
	397	!
	398	!-- Compression, output of compression information on FLD-file and output
	399	!-- of compressed data.
[559]	400	CALL write_compressed( local_pf, 30, 33, myid, nxl, nxr, nyn, nys, &
[667]	401	nzb, nz_do3d, prec, nbgp )
[1]	402	ELSE
	403	!
	404	!-- Uncompressed output.
	405	#if defined( __parallel )
[493]	406	IF ( netcdf_output ) THEN
	407	IF ( netcdf_data_format < 3 ) THEN
	408	!
	409	!-- Classic or 64bit format. Data is output in parallel in FORTRAN
	410	!-- binary format here, and later collected into one file by
	411	!-- combine_plot_fields
	412	IF ( myid == 0 ) THEN
[691]	413	WRITE ( 30 ) time_since_reference_point, &
	414	do3d_time_count(av), av
[493]	415	ENDIF
[667]	416	WRITE ( 30 ) nxlg, nxrg, nysg, nyng, nzb, nz_do3d
[559]	417	WRITE ( 30 ) local_pf
	418
[493]	419	ELSE
[646]	420	#if defined( __netcdf )
[493]	421	!
	422	!-- Output in NetCDF4/HDF5 format.
	423	!-- Do not output redundant ghost point data except for the
	424	!-- boundaries of the total domain.
	425	IF ( nxr == nx .AND. nyn /= ny ) THEN
	426	nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,if), &
[667]	427	local_pf(nxl:nxrg,nys:nyn,nzb:nz_do3d), &
[493]	428	start = (/ nxl+1, nys+1, nzb+1, do3d_time_count(av) /), &
[667]	429	count = (/ nxr-nxl+1+nbgp, nyn-nys+1, nz_do3d-nzb+1, 1 /) )
[493]	430	ELSEIF ( nxr /= nx .AND. nyn == ny ) THEN
	431	nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,if), &
[667]	432	local_pf(nxl:nxr,nys:nyng,nzb:nz_do3d), &
[493]	433	start = (/ nxl+1, nys+1, nzb+1, do3d_time_count(av) /), &
[667]	434	count = (/ nxr-nxl+1, nyn-nys+1+nbgp, nz_do3d-nzb+1, 1 /) )
[493]	435	ELSEIF ( nxr == nx .AND. nyn == ny ) THEN
	436	nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,if), &
[667]	437	local_pf(nxl:nxrg,nys:nyng,nzb:nz_do3d), &
[493]	438	start = (/ nxl+1, nys+1, nzb+1, do3d_time_count(av) /), &
[667]	439	count = (/ nxr-nxl+1+nbgp, nyn-nys+1+nbgp, nz_do3d-nzb+1, 1 /) )
[493]	440	ELSE
	441	nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,if), &
	442	local_pf(nxl:nxr,nys:nyn,nzb:nz_do3d), &
	443	start = (/ nxl+1, nys+1, nzb+1, do3d_time_count(av) /), &
	444	count = (/ nxr-nxl+1, nyn-nys+1, nz_do3d-nzb+1, 1 /) )
	445	ENDIF
	446	CALL handle_netcdf_error( 'data_output_3d', 386 )
[646]	447	#endif
[493]	448	ENDIF
[1]	449	ENDIF
	450	#else
	451	IF ( avs_output ) THEN
	452	WRITE ( 30 ) local_pf(nxl:nxr+1,nys:nyn+1,:)
	453	ENDIF
	454	#if defined( __netcdf )
	455	IF ( netcdf_output ) THEN
[493]	456
	457	nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,if), &
	458	local_pf(nxl:nxr+1,nys:nyn+1,nzb:nz_do3d), &
	459	start = (/ 1, 1, 1, do3d_time_count(av) /), &
	460	count = (/ nx+2, ny+2, nz_do3d-nzb+1, 1 /) )
	461	CALL handle_netcdf_error( 'data_output_3d', 446 )
	462
[1]	463	ENDIF
	464	#endif
	465	#endif
	466	ENDIF
	467
	468	if = if + 1
	469
	470	ENDDO
	471
	472	!
	473	!-- Deallocate temporary array.
	474	DEALLOCATE( local_pf )
	475
	476
	477	CALL cpu_log (log_point(14),'data_output_3d','stop','nobarrier')
	478
	479	!
	480	!-- Formats.
	481	3300 FORMAT ('variable ',I4,' file=',A,' filetype=unformatted skip=',I12/ &
	482	'label = ',A,A)
	483
	484	END SUBROUTINE data_output_3d

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