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source: palm/trunk/SOURCE/data_output_3d.f90 @ 4700

Last change on this file since 4700 was 4559, checked in by raasch, 4 years ago
files re-formatted to follow the PALM coding standard
Property svn:keywords set to `Id`
File size: 26.3 KB

Rev	Line
[1682]	1	!> @file data_output_3d.f90
[4559]	2	!--------------------------------------------------------------------------------------------------!
[2696]	3	! This file is part of the PALM model system.
[1036]	4	!
[4559]	5	! PALM is free software: you can redistribute it and/or modify it under the terms of the GNU General
	6	! Public License as published by the Free Software Foundation, either version 3 of the License, or
	7	! (at your option) any later version.
[1036]	8	!
[4559]	9	! PALM is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the
	10	! implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General
	11	! Public License for more details.
[1036]	12	!
[4559]	13	! You should have received a copy of the GNU General Public License along with PALM. If not, see
	14	! <http://www.gnu.org/licenses/>.
[1036]	15	!
[4360]	16	! Copyright 1997-2020 Leibniz Universitaet Hannover
[4559]	17	!--------------------------------------------------------------------------------------------------!
[1036]	18	!
[254]	19	! Current revisions:
[1106]	20	! ------------------
[3589]	21	!
	22	!
	23	! Former revisions:
	24	! -----------------
	25	! $Id: data_output_3d.f90 4559 2020-06-11 08:51:48Z raasch $
[4559]	26	! file re-formatted to follow the PALM coding standard
	27	!
	28	! 4457 2020-03-11 14:20:43Z raasch
[4457]	29	! use statement for exchange horiz added
[4559]	30	!
[4457]	31	! 4444 2020-03-05 15:59:50Z raasch
[4444]	32	! bugfix: cpp-directives for serial mode added
[4559]	33	!
[4444]	34	! 4360 2020-01-07 11:25:50Z suehring
[4559]	35	! Introduction of wall_flags_total_0, which currently sets bits based on static topography
	36	! information used in wall_flags_static_0
	37	!
[4346]	38	! 4329 2019-12-10 15:46:36Z motisi
[4329]	39	! Renamed wall_flags_0 to wall_flags_static_0
[4559]	40	!
[4329]	41	! 4182 2019-08-22 15:20:23Z scharf
[4182]	42	! Corrected "Former revisions" section
[4559]	43	!
[4182]	44	! 4162 2019-08-16 05:54:29Z raasch
[4162]	45	! bugfix for r4155
[4559]	46	!
[4162]	47	! 4155 2019-08-14 06:25:18Z raasch
[4155]	48	! bugfix for 3d-output in serial mode (ghost points must not be written)
[4559]	49	!
[4155]	50	! 4127 2019-07-30 14:47:10Z suehring
[4559]	51	! Adjustment for top boundary index for plant-canopy model outputs (merge from branch resler)
	52	!
[4127]	53	! 4048 2019-06-21 21:00:21Z knoop
[4048]	54	! Moved tcm_data_output_3d to module_interface
[4559]	55	!
[4048]	56	! 4039 2019-06-18 10:32:41Z suehring
[4039]	57	! modularize diagnostic output
[4559]	58	!
[4039]	59	! 3994 2019-05-22 18:08:09Z suehring
[3994]	60	! output of turbulence intensity added
[4559]	61	!
[3994]	62	! 3987 2019-05-22 09:52:13Z kanani
[3987]	63	! Introduce alternative switch for debug output during timestepping
[4559]	64	!
[3987]	65	! 3885 2019-04-11 11:29:34Z kanani
[4559]	66	! Changes related to global restructuring of location messages and introduction of additional debug
	67	! messages
	68	!
[3885]	69	! 3814 2019-03-26 08:40:31Z pavelkrc
[3766]	70	! unused variables removed
[4559]	71	!
[3766]	72	! 3655 2019-01-07 16:51:22Z knoop
[4559]	73	! Bugfix: use time_since_reference_point instead of simulated_time (relevant when using wall/soil
	74	! spinup)
[3582]	75	!
[4182]	76	! Revision 1.1 1997/09/03 06:29:36 raasch
	77	! Initial revision
	78	!
	79	!
[1]	80	! Description:
	81	! ------------
[1682]	82	!> Output of the 3D-arrays in netCDF and/or AVS format.
[4559]	83	!--------------------------------------------------------------------------------------------------!
[1682]	84	SUBROUTINE data_output_3d( av )
[1]	85
[4559]	86
	87	USE arrays_3d, &
[3766]	88	ONLY: d_exner, e, p, pt, q, ql, ql_c, ql_v, s, tend, u, v, vpt, w
[3274]	89
[1]	90	USE averaging
[3274]	91
[4559]	92	USE basic_constants_and_equations_mod, &
[3274]	93	ONLY: lv_d_cp
	94
[4559]	95	USE bulk_cloud_model_mod, &
[3637]	96	ONLY: bulk_cloud_model
[3274]	97
[4559]	98	USE control_parameters, &
	99	ONLY: debug_output_timestep, do3d, do3d_no, do3d_time_count, land_surface, message_string,&
	100	ntdim_3d, nz_do3d, plant_canopy, psolver, time_since_reference_point, urban_surface,&
[4127]	101	varnamelength
[3274]	102
[4444]	103	#if defined( __parallel )
[4559]	104	USE control_parameters, &
[4444]	105	ONLY: io_blocks, io_group
	106	#endif
	107
[4559]	108	USE cpulog, &
	109	ONLY: cpu_log, log_point
[2817]	110
[4559]	111	USE exchange_horiz_mod, &
[4457]	112	ONLY: exchange_horiz
	113
[4559]	114	USE indices, &
	115	ONLY: nbgp, nxl, nxlg, nxr, nxrg, nyn, nyng, nys, nysg, nzb, nzt, wall_flags_total_0
[4444]	116
	117	#if ! defined( __parallel )
[4559]	118	USE indices, &
[4444]	119	ONLY: nx, ny
[3405]	120	#endif
[3274]	121
[1320]	122	USE kinds
[3274]	123
[4559]	124	USE land_surface_model_mod, &
[2232]	125	ONLY: lsm_data_output_3d, nzb_soil, nzt_soil
[1551]	126
[4559]	127	USE module_interface, &
[3637]	128	ONLY: module_interface_data_output_3d
	129
[1783]	130	#if defined( __netcdf )
	131	USE NETCDF
	132	#endif
	133
[4559]	134	USE netcdf_interface, &
	135	ONLY: fill_value, id_set_3d, id_var_do3d, id_var_time_3d, nc_stat, netcdf_data_format, &
	136	netcdf_handle_error
[3294]	137
[4559]	138	USE particle_attributes, &
	139	ONLY: grid_particles, number_of_particles, particles, particle_advection_start, prt_count
[3637]	140
[1]	141	USE pegrid
	142
[4559]	143	USE plant_canopy_model_mod, &
[4127]	144	ONLY: pch_index
	145
[4559]	146	USE radiation_model_mod, &
[3814]	147	ONLY: nz_urban_b, nz_urban_t
[1585]	148
[4559]	149	USE urban_surface_mod, &
[2696]	150	ONLY: usm_data_output_3d
[1585]	151
[2007]	152
[1]	153	IMPLICIT NONE
	154
[3554]	155	INTEGER(iwp) :: av !< flag for (non-)average output
[2696]	156	INTEGER(iwp) :: flag_nr !< number of masking flag
[3554]	157	INTEGER(iwp) :: i !< loop index
	158	INTEGER(iwp) :: ivar !< variable index
	159	INTEGER(iwp) :: j !< loop index
	160	INTEGER(iwp) :: k !< loop index
	161	INTEGER(iwp) :: n !< loop index
[1682]	162	INTEGER(iwp) :: nzb_do !< vertical lower limit for data output
	163	INTEGER(iwp) :: nzt_do !< vertical upper limit for data output
[1]	164
[3554]	165	LOGICAL :: found !< true if output variable was found
	166	LOGICAL :: resorted !< true if variable is resorted
[1]	167
[3554]	168	REAL(wp) :: mean_r !< mean particle radius
	169	REAL(wp) :: s_r2 !< sum( particle-radius**2 )
	170	REAL(wp) :: s_r3 !< sum( particle-radius**3 )
[1]	171
[3554]	172	REAL(sp), DIMENSION(:,:,:), ALLOCATABLE :: local_pf !< output array
[1]	173
[4559]	174	REAL(wp), DIMENSION(:,:,:), POINTER :: to_be_resorted !< pointer to array which shall be
	175	!< output
[1]	176
[2011]	177	CHARACTER (LEN=varnamelength) :: trimvar !< TRIM of output-variable string
[2007]	178
[1]	179	!
	180	!-- Return, if nothing to output
	181	IF ( do3d_no(av) == 0 ) RETURN
	182
[3987]	183	IF ( debug_output_timestep ) CALL debug_message( 'data_output_3d', 'start' )
[3885]	184
[1]	185	CALL cpu_log (log_point(14),'data_output_3d','start')
	186
	187	!
	188	!-- Open output file.
[4559]	189	!-- For classic or 64bit netCDF output on more than one PE, each PE opens its own file and writes
	190	!-- the data of its subdomain in binary format. After the run, these files are combined to one
	191	!-- NetCDF file by combine_plot_fields.
[1031]	192	!-- For netCDF4/HDF5 output, data is written in parallel into one file.
[1327]	193	IF ( netcdf_data_format < 5 ) THEN
[2967]	194	#if defined( __parallel )
[1327]	195	CALL check_open( 30 )
[2967]	196	#endif
[1327]	197	IF ( myid == 0 ) CALL check_open( 106+av*10 )
[493]	198	ELSE
[1327]	199	CALL check_open( 106+av*10 )
[493]	200	ENDIF
[1]	201
	202	!
[4559]	203	!-- For parallel netcdf output the time axis must be limited. Return, if this limit is exceeded.
	204	!-- This could be the case, if the simulated time exceeds the given end time by the length of the
	205	!-- given output interval.
[1745]	206	IF ( netcdf_data_format > 4 ) THEN
	207	IF ( do3d_time_count(av) + 1 > ntdim_3d(av) ) THEN
[4559]	208	WRITE ( message_string, * ) 'Output of 3d data is not given at t=', &
	209	time_since_reference_point, 's because the maximum ', &
	210	'number of output time levels is ', &
[1745]	211	'exceeded.'
	212	CALL message( 'data_output_3d', 'PA0387', 0, 1, 0, 6, 0 )
	213	CALL cpu_log( log_point(14), 'data_output_3d', 'stop' )
	214	RETURN
	215	ENDIF
	216	ENDIF
	217
	218	!
[4559]	219	!-- Update the netCDF time axis.
	220	!-- In case of parallel output, this is only done by PE0 to increase the performance.
[1]	221	#if defined( __netcdf )
[1308]	222	do3d_time_count(av) = do3d_time_count(av) + 1
	223	IF ( myid == 0 ) THEN
[4559]	224	nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_time_3d(av), &
	225	(/ time_since_reference_point /), &
	226	start = (/ do3d_time_count(av) /), &
[1327]	227	count = (/ 1 /) )
[1783]	228	CALL netcdf_handle_error( 'data_output_3d', 376 )
[1]	229	ENDIF
	230	#endif
	231
	232	!
	233	!-- Loop over all variables to be written.
[3554]	234	ivar = 1
[1]	235
[3554]	236	DO WHILE ( do3d(av,ivar)(1:1) /= ' ' )
[2007]	237
[1]	238	!
[3637]	239	!-- Initiate found flag and resorting flag
	240	found = .FALSE.
	241	resorted = .FALSE.
[4127]	242	trimvar = TRIM( do3d(av,ivar) )
	243
[3637]	244	!
[4559]	245	!-- Temporary solution to account for data output within the new urban surface model
	246	!-- (urban_surface_mod.f90), see also SELECT CASE ( trimvar ).
[1]	247	!-- Store the array chosen on the temporary array.
[3637]	248	nzb_do = nzb
[4127]	249	!
[4559]	250	!-- Set top index for 3D output. Note in case of plant-canopy model these index is determined by
	251	!-- pch_index.
[4127]	252	IF ( plant_canopy .AND. trimvar(1:4) == 'pcm_' ) THEN
	253	nzt_do = pch_index
	254	ELSE
	255	nzt_do = nz_do3d
	256	ENDIF
[3637]	257
[1551]	258	!
	259	!-- Allocate a temporary array with the desired output dimensions.
[2512]	260	ALLOCATE( local_pf(nxl:nxr,nys:nyn,nzb_do:nzt_do) )
[2696]	261	!
	262	!-- Before each output, set array local_pf to fill value
	263	local_pf = fill_value
	264	!
	265	!-- Set masking flag for topography for not resorted arrays
	266	flag_nr = 0
[1551]	267
[2007]	268	SELECT CASE ( trimvar )
[1]	269
	270	CASE ( 'e' )
	271	IF ( av == 0 ) THEN
	272	to_be_resorted => e
	273	ELSE
[4559]	274	IF ( .NOT. ALLOCATED( e_av ) ) THEN
[3004]	275	ALLOCATE( e_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
	276	e_av = REAL( fill_value, KIND = wp )
	277	ENDIF
[1]	278	to_be_resorted => e_av
	279	ENDIF
	280
[3421]	281	CASE ( 'thetal' )
[771]	282	IF ( av == 0 ) THEN
	283	to_be_resorted => pt
	284	ELSE
[4559]	285	IF ( .NOT. ALLOCATED( lpt_av ) ) THEN
[3004]	286	ALLOCATE( lpt_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
	287	lpt_av = REAL( fill_value, KIND = wp )
	288	ENDIF
[771]	289	to_be_resorted => lpt_av
	290	ENDIF
	291
[1]	292	CASE ( 'p' )
	293	IF ( av == 0 ) THEN
[727]	294	IF ( psolver /= 'sor' ) CALL exchange_horiz( p, nbgp )
[1]	295	to_be_resorted => p
	296	ELSE
[4559]	297	IF ( .NOT. ALLOCATED( p_av ) ) THEN
[3004]	298	ALLOCATE( p_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
	299	p_av = REAL( fill_value, KIND = wp )
	300	ENDIF
[727]	301	IF ( psolver /= 'sor' ) CALL exchange_horiz( p_av, nbgp )
[1]	302	to_be_resorted => p_av
	303	ENDIF
	304
	305	CASE ( 'pc' ) ! particle concentration (requires ghostpoint exchange)
	306	IF ( av == 0 ) THEN
[3646]	307	IF ( time_since_reference_point >= particle_advection_start ) THEN
[1359]	308	tend = prt_count
	309	ELSE
	310	tend = 0.0_wp
	311	ENDIF
[2512]	312	DO i = nxl, nxr
	313	DO j = nys, nyn
[1551]	314	DO k = nzb_do, nzt_do
[1]	315	local_pf(i,j,k) = tend(k,j,i)
	316	ENDDO
	317	ENDDO
	318	ENDDO
	319	resorted = .TRUE.
	320	ELSE
[4559]	321	IF ( .NOT. ALLOCATED( pc_av ) ) THEN
[3004]	322	ALLOCATE( pc_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
	323	pc_av = REAL( fill_value, KIND = wp )
	324	ENDIF
[1]	325	to_be_resorted => pc_av
	326	ENDIF
	327
[1359]	328	CASE ( 'pr' ) ! mean particle radius (effective radius)
[1]	329	IF ( av == 0 ) THEN
[3646]	330	IF ( time_since_reference_point >= particle_advection_start ) THEN
[1359]	331	DO i = nxl, nxr
	332	DO j = nys, nyn
[1551]	333	DO k = nzb_do, nzt_do
[1359]	334	number_of_particles = prt_count(k,j,i)
[4559]	335	IF ( number_of_particles <= 0 ) CYCLE
[1359]	336	particles => grid_particles(k,j,i)%particles(1:number_of_particles)
	337	s_r2 = 0.0_wp
	338	s_r3 = 0.0_wp
	339	DO n = 1, number_of_particles
	340	IF ( particles(n)%particle_mask ) THEN
[4559]	341	s_r2 = s_r2 + particles(n)%radius*2 particles(n)%weight_factor
	342	s_r3 = s_r3 + particles(n)%radius*3 particles(n)%weight_factor
[1359]	343	ENDIF
	344	ENDDO
	345	IF ( s_r2 > 0.0_wp ) THEN
	346	mean_r = s_r3 / s_r2
	347	ELSE
	348	mean_r = 0.0_wp
	349	ENDIF
	350	tend(k,j,i) = mean_r
[1]	351	ENDDO
	352	ENDDO
	353	ENDDO
[1359]	354	ELSE
	355	tend = 0.0_wp
	356	ENDIF
[2512]	357	DO i = nxl, nxr
	358	DO j = nys, nyn
[1551]	359	DO k = nzb_do, nzt_do
[1]	360	local_pf(i,j,k) = tend(k,j,i)
	361	ENDDO
	362	ENDDO
	363	ENDDO
	364	resorted = .TRUE.
	365	ELSE
[4559]	366	IF ( .NOT. ALLOCATED( pr_av ) ) THEN
[3004]	367	ALLOCATE( pr_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
	368	pr_av = REAL( fill_value, KIND = wp )
	369	ENDIF
[1]	370	to_be_resorted => pr_av
	371	ENDIF
	372
[3421]	373	CASE ( 'theta' )
[1]	374	IF ( av == 0 ) THEN
[4559]	375	IF ( .NOT. bulk_cloud_model ) THEN
[1]	376	to_be_resorted => pt
	377	ELSE
[2512]	378	DO i = nxl, nxr
	379	DO j = nys, nyn
[1551]	380	DO k = nzb_do, nzt_do
[4559]	381	local_pf(i,j,k) = pt(k,j,i) + lv_d_cp * d_exner(k) * ql(k,j,i)
[1]	382	ENDDO
	383	ENDDO
	384	ENDDO
	385	resorted = .TRUE.
	386	ENDIF
	387	ELSE
[4559]	388	IF ( .NOT. ALLOCATED( pt_av ) ) THEN
[3004]	389	ALLOCATE( pt_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
	390	pt_av = REAL( fill_value, KIND = wp )
	391	ENDIF
[1]	392	to_be_resorted => pt_av
	393	ENDIF
	394
	395	CASE ( 'q' )
	396	IF ( av == 0 ) THEN
	397	to_be_resorted => q
	398	ELSE
[4559]	399	IF ( .NOT. ALLOCATED( q_av ) ) THEN
[3004]	400	ALLOCATE( q_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
	401	q_av = REAL( fill_value, KIND = wp )
	402	ENDIF
[1]	403	to_be_resorted => q_av
	404	ENDIF
[691]	405
[1053]	406	CASE ( 'ql' )
	407	IF ( av == 0 ) THEN
[1115]	408	to_be_resorted => ql
[1053]	409	ELSE
[4559]	410	IF ( .NOT. ALLOCATED( ql_av ) ) THEN
[3004]	411	ALLOCATE( ql_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
	412	ql_av = REAL( fill_value, KIND = wp )
	413	ENDIF
[1115]	414	to_be_resorted => ql_av
[1053]	415	ENDIF
	416
[1]	417	CASE ( 'ql_c' )
	418	IF ( av == 0 ) THEN
	419	to_be_resorted => ql_c
	420	ELSE
[4559]	421	IF ( .NOT. ALLOCATED( ql_c_av ) ) THEN
[3004]	422	ALLOCATE( ql_c_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
	423	ql_c_av = REAL( fill_value, KIND = wp )
	424	ENDIF
[1]	425	to_be_resorted => ql_c_av
	426	ENDIF
	427
	428	CASE ( 'ql_v' )
	429	IF ( av == 0 ) THEN
	430	to_be_resorted => ql_v
	431	ELSE
[4559]	432	IF ( .NOT. ALLOCATED( ql_v_av ) ) THEN
[3004]	433	ALLOCATE( ql_v_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
	434	ql_v_av = REAL( fill_value, KIND = wp )
	435	ENDIF
[1]	436	to_be_resorted => ql_v_av
	437	ENDIF
	438
	439	CASE ( 'ql_vp' )
	440	IF ( av == 0 ) THEN
[3646]	441	IF ( time_since_reference_point >= particle_advection_start ) THEN
[1359]	442	DO i = nxl, nxr
	443	DO j = nys, nyn
[1551]	444	DO k = nzb_do, nzt_do
[1359]	445	number_of_particles = prt_count(k,j,i)
	446	IF (number_of_particles <= 0) CYCLE
	447	particles => grid_particles(k,j,i)%particles(1:number_of_particles)
	448	DO n = 1, number_of_particles
	449	IF ( particles(n)%particle_mask ) THEN
[4559]	450	tend(k,j,i) = tend(k,j,i) + &
	451	particles(n)%weight_factor / prt_count(k,j,i)
[1359]	452	ENDIF
	453	ENDDO
[1007]	454	ENDDO
	455	ENDDO
	456	ENDDO
[1359]	457	ELSE
	458	tend = 0.0_wp
	459	ENDIF
[2512]	460	DO i = nxl, nxr
	461	DO j = nys, nyn
[1551]	462	DO k = nzb_do, nzt_do
[1007]	463	local_pf(i,j,k) = tend(k,j,i)
	464	ENDDO
	465	ENDDO
	466	ENDDO
	467	resorted = .TRUE.
[1]	468	ELSE
[4559]	469	IF ( .NOT. ALLOCATED( ql_vp_av ) ) THEN
[3004]	470	ALLOCATE( ql_vp_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
	471	ql_vp_av = REAL( fill_value, KIND = wp )
	472	ENDIF
[1]	473	to_be_resorted => ql_vp_av
	474	ENDIF
	475
	476	CASE ( 'qv' )
	477	IF ( av == 0 ) THEN
[2512]	478	DO i = nxl, nxr
	479	DO j = nys, nyn
[1551]	480	DO k = nzb_do, nzt_do
[1]	481	local_pf(i,j,k) = q(k,j,i) - ql(k,j,i)
	482	ENDDO
	483	ENDDO
	484	ENDDO
	485	resorted = .TRUE.
	486	ELSE
[4559]	487	IF ( .NOT. ALLOCATED( qv_av ) ) THEN
[3004]	488	ALLOCATE( qv_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
	489	qv_av = REAL( fill_value, KIND = wp )
	490	ENDIF
[1]	491	to_be_resorted => qv_av
	492	ENDIF
	493
	494	CASE ( 's' )
	495	IF ( av == 0 ) THEN
[1960]	496	to_be_resorted => s
[1]	497	ELSE
[4559]	498	IF ( .NOT. ALLOCATED( s_av ) ) THEN
[3004]	499	ALLOCATE( s_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
	500	s_av = REAL( fill_value, KIND = wp )
	501	ENDIF
[355]	502	to_be_resorted => s_av
[1]	503	ENDIF
[691]	504
[1]	505	CASE ( 'u' )
[2696]	506	flag_nr = 1
[1]	507	IF ( av == 0 ) THEN
	508	to_be_resorted => u
	509	ELSE
[4559]	510	IF ( .NOT. ALLOCATED( u_av ) ) THEN
[3004]	511	ALLOCATE( u_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
	512	u_av = REAL( fill_value, KIND = wp )
	513	ENDIF
[1]	514	to_be_resorted => u_av
	515	ENDIF
	516
	517	CASE ( 'v' )
[2696]	518	flag_nr = 2
[1]	519	IF ( av == 0 ) THEN
	520	to_be_resorted => v
	521	ELSE
[4559]	522	IF ( .NOT. ALLOCATED( v_av ) ) THEN
[3004]	523	ALLOCATE( v_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
	524	v_av = REAL( fill_value, KIND = wp )
	525	ENDIF
[1]	526	to_be_resorted => v_av
	527	ENDIF
	528
[3421]	529	CASE ( 'thetav' )
[1]	530	IF ( av == 0 ) THEN
	531	to_be_resorted => vpt
	532	ELSE
[4559]	533	IF ( .NOT. ALLOCATED( vpt_av ) ) THEN
[3004]	534	ALLOCATE( vpt_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
	535	vpt_av = REAL( fill_value, KIND = wp )
	536	ENDIF
[1]	537	to_be_resorted => vpt_av
	538	ENDIF
	539
	540	CASE ( 'w' )
[2696]	541	flag_nr = 3
[1]	542	IF ( av == 0 ) THEN
	543	to_be_resorted => w
	544	ELSE
[4559]	545	IF ( .NOT. ALLOCATED( w_av ) ) THEN
[3004]	546	ALLOCATE( w_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
	547	w_av = REAL( fill_value, KIND = wp )
	548	ENDIF
[1]	549	to_be_resorted => w_av
	550	ENDIF
	551
	552	CASE DEFAULT
[3637]	553	!
	554	!-- Quantities of other modules
	555	IF ( .NOT. found ) THEN
[4559]	556	CALL module_interface_data_output_3d( av, trimvar, found, local_pf, fill_value, &
	557	resorted, nzb_do, nzt_do &
	558	)
[3294]	559	ENDIF
	560
[1972]	561	!
[3637]	562	!-- Temporary workaround: ToDo: refactor local_pf allocation
	563	IF ( .NOT. found .AND. urban_surface .AND. trimvar(1:4) == 'usm_' ) THEN
	564	!
	565	!-- For urban model quantities, it is required to re-allocate local_pf
[3814]	566	nzb_do = nz_urban_b
	567	nzt_do = nz_urban_t
[1972]	568
	569	DEALLOCATE ( local_pf )
[2512]	570	ALLOCATE( local_pf(nxl:nxr,nys:nyn,nzb_do:nzt_do) )
[2696]	571	local_pf = fill_value
[1972]	572
[4559]	573	CALL usm_data_output_3d( av, trimvar, found, local_pf, nzb_do, nzt_do )
[1972]	574	resorted = .TRUE.
[1976]	575
	576	!
	577	!-- If no soil model variable was found, re-allocate local_pf
	578	IF ( .NOT. found ) THEN
	579	nzb_do = nzb
	580	nzt_do = nz_do3d
	581
	582	DEALLOCATE ( local_pf )
[3637]	583	ALLOCATE( local_pf(nxl:nxr,nys:nyn,nzb_do:nzt_do) )
[1976]	584	ENDIF
	585
[1972]	586	ENDIF
	587
[3637]	588	!
	589	!-- Temporary workaround: ToDo: refactor local_pf allocation
	590	IF ( .NOT. found .AND. land_surface ) THEN
	591	!
	592	!-- For soil model quantities, it is required to re-allocate local_pf
	593	nzb_do = nzb_soil
	594	nzt_do = nzt_soil
[1976]	595
[3637]	596	DEALLOCATE ( local_pf )
	597	ALLOCATE( local_pf(nxl:nxr,nys:nyn,nzb_do:nzt_do) )
	598	local_pf = fill_value
[2817]	599
[3637]	600	CALL lsm_data_output_3d( av, trimvar, found, local_pf )
[2696]	601	resorted = .TRUE.
	602
[3467]	603	!
[3637]	604	!-- If no soil model variable was found, re-allocate local_pf
	605	IF ( .NOT. found ) THEN
	606	nzb_do = nzb
	607	nzt_do = nz_do3d
[2209]	608
[3637]	609	DEALLOCATE ( local_pf )
	610	ALLOCATE( local_pf(nxl:nxr,nys:nyn,nzb_do:nzt_do) )
	611	ENDIF
[3448]	612
[1972]	613	ENDIF
[1]	614
[254]	615	IF ( .NOT. found ) THEN
[4559]	616	message_string = 'no output available for: ' // TRIM( do3d(av,ivar) )
[254]	617	CALL message( 'data_output_3d', 'PA0182', 0, 0, 0, 6, 0 )
[1]	618	ENDIF
	619
	620	END SELECT
	621
	622	!
	623	!-- Resort the array to be output, if not done above
	624	IF ( .NOT. resorted ) THEN
[2512]	625	DO i = nxl, nxr
	626	DO j = nys, nyn
[1551]	627	DO k = nzb_do, nzt_do
[4559]	628	local_pf(i,j,k) = MERGE( to_be_resorted(k,j,i), &
	629	REAL( fill_value, KIND = wp ), &
	630	BTEST( wall_flags_total_0(k,j,i), flag_nr ) )
[1]	631	ENDDO
	632	ENDDO
	633	ENDDO
	634	ENDIF
	635
	636	!
[1327]	637	!-- Output of the 3D-array
	638	#if defined( __parallel )
	639	IF ( netcdf_data_format < 5 ) THEN
[1]	640	!
[4559]	641	!-- Non-parallel netCDF output. Data is output in parallel in FORTRAN binary format here, and
	642	!-- later collected into one file by combine_plot_fields
[1327]	643	IF ( myid == 0 ) THEN
[4559]	644	WRITE ( 30 ) time_since_reference_point, do3d_time_count(av), av
[1]	645	ENDIF
[1327]	646	DO i = 0, io_blocks-1
	647	IF ( i == io_group ) THEN
[2512]	648	WRITE ( 30 ) nxl, nxr, nys, nyn, nzb_do, nzt_do
[1551]	649	WRITE ( 30 ) local_pf(:,:,nzb_do:nzt_do)
[1327]	650	ENDIF
[1972]	651
[1327]	652	CALL MPI_BARRIER( comm2d, ierr )
[1972]	653
[1327]	654	ENDDO
[559]	655
[1327]	656	ELSE
[646]	657	#if defined( __netcdf )
[493]	658	!
[1327]	659	!-- Parallel output in netCDF4/HDF5 format.
[2512]	660	! IF ( nxr == nx .AND. nyn /= ny ) THEN
[3554]	661	! nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,ivar), &
[2512]	662	! local_pf(nxl:nxr+1,nys:nyn,nzb_do:nzt_do), &
	663	! start = (/ nxl+1, nys+1, nzb_do+1, do3d_time_count(av) /), &
	664	! count = (/ nxr-nxl+2, nyn-nys+1, nzt_do-nzb_do+1, 1 /) )
	665	! ELSEIF ( nxr /= nx .AND. nyn == ny ) THEN
[3554]	666	! nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,ivar), &
[2512]	667	! local_pf(nxl:nxr,nys:nyn+1,nzb_do:nzt_do), &
	668	! start = (/ nxl+1, nys+1, nzb_do+1, do3d_time_count(av) /), &
	669	! count = (/ nxr-nxl+1, nyn-nys+2, nzt_do-nzb_do+1, 1 /) )
	670	! ELSEIF ( nxr == nx .AND. nyn == ny ) THEN
[3554]	671	! nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,ivar), &
[2512]	672	! local_pf(nxl:nxr+1,nys:nyn+1,nzb_do:nzt_do ), &
	673	! start = (/ nxl+1, nys+1, nzb_do+1, do3d_time_count(av) /), &
	674	! count = (/ nxr-nxl+2, nyn-nys+2, nzt_do-nzb_do+1, 1 /) )
	675	! ELSE
[4559]	676	nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,ivar), &
	677	local_pf(nxl:nxr,nys:nyn,nzb_do:nzt_do), &
	678	start = (/ nxl+1, nys+1, nzb_do+1, do3d_time_count(av) /), &
	679	count = (/ nxr-nxl+1, nyn-nys+1, nzt_do-nzb_do+1, 1 /) &
	680	)
[2512]	681	! ENDIF
[1783]	682	CALL netcdf_handle_error( 'data_output_3d', 386 )
[646]	683	#endif
[1327]	684	ENDIF
[1]	685	#else
	686	#if defined( __netcdf )
[4559]	687	nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,ivar), &
	688	local_pf(nxl:nxr,nys:nyn,nzb_do:nzt_do), &
	689	start = (/ 1, 1, 1, do3d_time_count(av) /), &
	690	count = (/ nx+1, ny+1, nzt_do-nzb_do+1, 1 /) )
[1783]	691	CALL netcdf_handle_error( 'data_output_3d', 446 )
[1]	692	#endif
	693	#endif
	694
[3554]	695	ivar = ivar + 1
[1]	696
	697	!
[1551]	698	!-- Deallocate temporary array
	699	DEALLOCATE ( local_pf )
[1]	700
[1551]	701	ENDDO
[1]	702
[1318]	703	CALL cpu_log( log_point(14), 'data_output_3d', 'stop' )
[1]	704
[3987]	705	IF ( debug_output_timestep ) CALL debug_message( 'data_output_3d', 'end' )
[3885]	706
[3987]	707
[1]	708	END SUBROUTINE data_output_3d

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