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source: palm/trunk/SOURCE/data_output_3d.f90 @ 3301

Last change on this file since 3301 was 3294, checked in by raasch, 6 years ago
modularization of the ocean code
Property svn:keywords set to `Id`
File size: 30.7 KB

Rev	Line
[1682]	1	!> @file data_output_3d.f90
[2000]	2	!------------------------------------------------------------------------------!
[2696]	3	! This file is part of the PALM model system.
[1036]	4	!
[2000]	5	! PALM is free software: you can redistribute it and/or modify it under the
	6	! terms of the GNU General Public License as published by the Free Software
	7	! Foundation, either version 3 of the License, or (at your option) any later
	8	! version.
[1036]	9	!
	10	! PALM is distributed in the hope that it will be useful, but WITHOUT ANY
	11	! WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR
	12	! A PARTICULAR PURPOSE. See the GNU General Public License for more details.
	13	!
	14	! You should have received a copy of the GNU General Public License along with
	15	! PALM. If not, see <http://www.gnu.org/licenses/>.
	16	!
[2718]	17	! Copyright 1997-2018 Leibniz Universitaet Hannover
[2000]	18	!------------------------------------------------------------------------------!
[1036]	19	!
[254]	20	! Current revisions:
[1106]	21	! ------------------
[1961]	22	!
[3049]	23	!
[1552]	24	! Former revisions:
	25	! -----------------
	26	! $Id: data_output_3d.f90 3294 2018-10-01 02:37:10Z gronemeier $
[3294]	27	! changes concerning modularization of ocean option
	28	!
	29	! 3274 2018-09-24 15:42:55Z knoop
[3274]	30	! Modularization of all bulk cloud physics code components
	31	!
	32	! 3241 2018-09-12 15:02:00Z raasch
[3241]	33	! unused variables and format statements removed
	34	!
	35	! 3049 2018-05-29 13:52:36Z Giersch
[3049]	36	! Error messages revised
	37	!
	38	! 3045 2018-05-28 07:55:41Z Giersch
[3045]	39	! Error message revised
	40	!
	41	! 3014 2018-05-09 08:42:38Z maronga
[3014]	42	! Added nzb_do and nzt_do for some modules for 3d output
	43	!
	44	! 3004 2018-04-27 12:33:25Z Giersch
[3004]	45	! Allocation checks implemented (averaged data will be assigned to fill values
	46	! if no allocation happened so far)
	47	!
	48	! 2967 2018-04-13 11:22:08Z raasch
[2967]	49	! bugfix: missing parallel cpp-directives added
	50	!
	51	! 2817 2018-02-19 16:32:21Z knoop
[2817]	52	! Preliminary gust module interface implemented
	53	!
	54	! 2766 2018-01-22 17:17:47Z kanani
[2766]	55	! Removed preprocessor directive __chem
	56	!
	57	! 2756 2018-01-16 18:11:14Z suehring
[2756]	58	! Fill values for 3D output of chemical species introduced.
	59	!
	60	! 2746 2018-01-15 12:06:04Z suehring
[2746]	61	! Move flag plant canopy to modules
	62	!
	63	! 2718 2018-01-02 08:49:38Z maronga
[2716]	64	! Corrected "Former revisions" section
	65	!
	66	! 2696 2017-12-14 17:12:51Z kanani
	67	! Change in file header (GPL part)
[2696]	68	! Implementation of turbulence_closure_mod (TG)
	69	! Implementation of chemistry module (FK)
	70	! Set fill values at topography grid points or e.g. non-natural-type surface
	71	! in case of LSM output (MS)
	72	!
	73	! 2512 2017-10-04 08:26:59Z raasch
[2512]	74	! upper bounds of 3d output changed from nx+1,ny+1 to nx,ny
	75	! no output of ghost layer data
	76	!
	77	! 2292 2017-06-20 09:51:42Z schwenkel
[2292]	78	! Implementation of new microphysic scheme: cloud_scheme = 'morrison'
	79	! includes two more prognostic equations for cloud drop concentration (nc)
	80	! and cloud water content (qc).
	81	!
	82	! 2233 2017-05-30 18:08:54Z suehring
[1552]	83	!
[2233]	84	! 2232 2017-05-30 17:47:52Z suehring
	85	! Adjustments to new topography concept
	86	!
[2210]	87	! 2209 2017-04-19 09:34:46Z kanani
	88	! Added plant canopy model output
	89	!
[2032]	90	! 2031 2016-10-21 15:11:58Z knoop
	91	! renamed variable rho to rho_ocean and rho_av to rho_ocean_av
	92	!
[2012]	93	! 2011 2016-09-19 17:29:57Z kanani
	94	! Flag urban_surface is now defined in module control_parameters,
	95	! changed prefix for urban surface model output to "usm_",
	96	! introduced control parameter varnamelength for LEN of trimvar.
	97	!
[2008]	98	! 2007 2016-08-24 15:47:17Z kanani
	99	! Added support for new urban surface model (temporary modifications of
	100	! SELECT CASE ( ) necessary, see variable trimvar)
	101	!
[2001]	102	! 2000 2016-08-20 18:09:15Z knoop
	103	! Forced header and separation lines into 80 columns
	104	!
[1981]	105	! 1980 2016-07-29 15:51:57Z suehring
	106	! Bugfix, in order to steer user-defined output, setting flag found explicitly
	107	! to .F.
	108	!
[1977]	109	! 1976 2016-07-27 13:28:04Z maronga
	110	! Output of radiation quantities is now done directly in the respective module
	111	!
[1973]	112	! 1972 2016-07-26 07:52:02Z maronga
	113	! Output of land surface quantities is now done directly in the respective module.
	114	! Unnecessary directive __parallel removed.
	115	!
[1961]	116	! 1960 2016-07-12 16:34:24Z suehring
	117	! Scalar surface flux added
	118	!
[1851]	119	! 1849 2016-04-08 11:33:18Z hoffmann
	120	! prr moved to arrays_3d
	121	!
[1823]	122	! 1822 2016-04-07 07:49:42Z hoffmann
	123	! prr vertical dimensions set to nzb_do to nzt_do. Unused variables deleted.
	124	!
[1809]	125	! 1808 2016-04-05 19:44:00Z raasch
	126	! test output removed
	127	!
[1784]	128	! 1783 2016-03-06 18:36:17Z raasch
	129	! name change of netcdf routines and module + related changes
	130	!
[1746]	131	! 1745 2016-02-05 13:06:51Z gronemeier
	132	! Bugfix: test if time axis limit exceeds moved to point after call of check_open
	133	!
[1692]	134	! 1691 2015-10-26 16:17:44Z maronga
	135	! Added output of radiative heating rates for RRTMG
	136	!
[1683]	137	! 1682 2015-10-07 23:56:08Z knoop
	138	! Code annotations made doxygen readable
	139	!
[1586]	140	! 1585 2015-04-30 07:05:52Z maronga
	141	! Added support for RRTMG
	142	!
[1552]	143	! 1551 2015-03-03 14:18:16Z maronga
[1551]	144	! Added suppport for land surface model and radiation model output. In the course
	145	! of this action, the limits for vertical loops have been changed (from nzb and
	146	! nzt+1 to nzb_do and nzt_do, respectively in order to allow soil model output).
	147	! Moreover, a new vertical grid zs was introduced.
[1329]	148	!
[1360]	149	! 1359 2014-04-11 17:15:14Z hoffmann
	150	! New particle structure integrated.
	151	!
[1354]	152	! 1353 2014-04-08 15:21:23Z heinze
	153	! REAL constants provided with KIND-attribute
	154	!
[1329]	155	! 1327 2014-03-21 11:00:16Z raasch
	156	! parts concerning avs output removed,
	157	! -netcdf output queries
	158	!
[1321]	159	! 1320 2014-03-20 08:40:49Z raasch
[1320]	160	! ONLY-attribute added to USE-statements,
	161	! kind-parameters added to all INTEGER and REAL declaration statements,
	162	! kinds are defined in new module kinds,
	163	! old module precision_kind is removed,
	164	! revision history before 2012 removed,
	165	! comment fields (!:) to be used for variable explanations added to
	166	! all variable declaration statements
[674]	167	!
[1319]	168	! 1318 2014-03-17 13:35:16Z raasch
	169	! barrier argument removed from cpu_log,
	170	! module interfaces removed
	171	!
[1309]	172	! 1308 2014-03-13 14:58:42Z fricke
	173	! Check, if the limit of the time dimension is exceeded for parallel output
	174	! To increase the performance for parallel output, the following is done:
	175	! - Update of time axis is only done by PE0
	176	!
[1245]	177	! 1244 2013-10-31 08:16:56Z raasch
	178	! Bugfix for index bounds in case of 3d-parallel output
	179	!
[1116]	180	! 1115 2013-03-26 18:16:16Z hoffmann
	181	! ql is calculated by calc_liquid_water_content
	182	!
[1107]	183	! 1106 2013-03-04 05:31:38Z raasch
	184	! array_kind renamed precision_kind
	185	!
[1077]	186	! 1076 2012-12-05 08:30:18Z hoffmann
	187	! Bugfix in output of ql
	188	!
[1054]	189	! 1053 2012-11-13 17:11:03Z hoffmann
	190	! +nr, qr, prr, qc and averaged quantities
	191	!
[1037]	192	! 1036 2012-10-22 13:43:42Z raasch
	193	! code put under GPL (PALM 3.9)
	194	!
[1035]	195	! 1031 2012-10-19 14:35:30Z raasch
	196	! netCDF4 without parallel file support implemented
	197	!
[1008]	198	! 1007 2012-09-19 14:30:36Z franke
	199	! Bugfix: missing calculation of ql_vp added
	200	!
[1]	201	! Revision 1.1 1997/09/03 06:29:36 raasch
	202	! Initial revision
	203	!
	204	!
	205	! Description:
	206	! ------------
[1682]	207	!> Output of the 3D-arrays in netCDF and/or AVS format.
[1]	208	!------------------------------------------------------------------------------!
[1682]	209	SUBROUTINE data_output_3d( av )
	210
[1]	211
[1320]	212	USE arrays_3d, &
[3294]	213	ONLY: d_exner, e, nc, nr, p, pt, prr, q, qc, ql, ql_c, ql_v, qr, s, &
	214	tend, u, v, vpt, w
[3274]	215
[1]	216	USE averaging
[3274]	217
	218	USE basic_constants_and_equations_mod, &
	219	ONLY: lv_d_cp
	220
	221	USE bulk_cloud_model_mod, &
	222	ONLY: bulk_cloud_model, bcm_data_output_3d
	223
[2696]	224	USE chemistry_model_mod, &
	225	ONLY: chem_data_output_3d
	226
[1320]	227	USE control_parameters, &
[3274]	228	ONLY: air_chemistry, do3d, do3d_no, do3d_time_count, &
[2696]	229	io_blocks, io_group, land_surface, message_string, &
[3294]	230	ntdim_3d, nz_do3d, ocean_mode, plant_canopy, &
[2232]	231	psolver, simulated_time, time_since_reference_point, &
	232	urban_surface, varnamelength
[3274]	233
[1320]	234	USE cpulog, &
	235	ONLY: log_point, cpu_log
[2817]	236
	237	USE gust_mod, &
	238	ONLY: gust_data_output_3d, gust_module_enabled
[3274]	239
[1320]	240	USE indices, &
[3241]	241	ONLY: nbgp, nxl, nxlg, nxr, nxrg, nyn, nyng, nys, nysg, nzb, nzt, &
	242	wall_flags_0
[3274]	243
[1320]	244	USE kinds
[3274]	245
[1551]	246	USE land_surface_model_mod, &
[2232]	247	ONLY: lsm_data_output_3d, nzb_soil, nzt_soil
[1551]	248
[1783]	249	#if defined( __netcdf )
	250	USE NETCDF
	251	#endif
	252
	253	USE netcdf_interface, &
[2696]	254	ONLY: fill_value, id_set_3d, id_var_do3d, id_var_time_3d, nc_stat, &
[1783]	255	netcdf_data_format, netcdf_handle_error
[1320]	256
[3294]	257	USE ocean_mod, &
	258	ONLY: ocean_data_output_3d
	259
[1320]	260	USE particle_attributes, &
[1359]	261	ONLY: grid_particles, number_of_particles, particles, &
	262	particle_advection_start, prt_count
[1320]	263
[1]	264	USE pegrid
	265
[2209]	266	USE plant_canopy_model_mod, &
[2746]	267	ONLY: pcm_data_output_3d
[2209]	268
[1585]	269	USE radiation_model_mod, &
[2696]	270	ONLY: nzub, nzut, radiation, radiation_data_output_3d
[1585]	271
[2696]	272	USE turbulence_closure_mod, &
	273	ONLY: tcm_data_output_3d
	274
[2007]	275	USE urban_surface_mod, &
[2696]	276	ONLY: usm_data_output_3d
[1585]	277
[2007]	278
[1]	279	IMPLICIT NONE
	280
[1682]	281	INTEGER(iwp) :: av !<
[2696]	282	INTEGER(iwp) :: flag_nr !< number of masking flag
[1682]	283	INTEGER(iwp) :: i !<
	284	INTEGER(iwp) :: if !<
	285	INTEGER(iwp) :: j !<
	286	INTEGER(iwp) :: k !<
	287	INTEGER(iwp) :: n !<
	288	INTEGER(iwp) :: nzb_do !< vertical lower limit for data output
	289	INTEGER(iwp) :: nzt_do !< vertical upper limit for data output
[1]	290
[1682]	291	LOGICAL :: found !<
	292	LOGICAL :: resorted !<
[1]	293
[1682]	294	REAL(wp) :: mean_r !<
	295	REAL(wp) :: s_r2 !<
	296	REAL(wp) :: s_r3 !<
[1]	297
[1682]	298	REAL(sp), DIMENSION(:,:,:), ALLOCATABLE :: local_pf !<
[1]	299
[1682]	300	REAL(wp), DIMENSION(:,:,:), POINTER :: to_be_resorted !<
[1]	301
[2011]	302	CHARACTER (LEN=varnamelength) :: trimvar !< TRIM of output-variable string
[2007]	303
[1]	304	!
	305	!-- Return, if nothing to output
	306	IF ( do3d_no(av) == 0 ) RETURN
	307
	308	CALL cpu_log (log_point(14),'data_output_3d','start')
	309
	310	!
	311	!-- Open output file.
[2512]	312	!-- For classic or 64bit netCDF output on more than one PE, each PE opens its
	313	!-- own file and writes the data of its subdomain in binary format. After the
	314	!-- run, these files are combined to one NetCDF file by combine_plot_fields.
[1031]	315	!-- For netCDF4/HDF5 output, data is written in parallel into one file.
[1327]	316	IF ( netcdf_data_format < 5 ) THEN
[2967]	317	#if defined( __parallel )
[1327]	318	CALL check_open( 30 )
[2967]	319	#endif
[1327]	320	IF ( myid == 0 ) CALL check_open( 106+av*10 )
[493]	321	ELSE
[1327]	322	CALL check_open( 106+av*10 )
[493]	323	ENDIF
[1]	324
	325	!
[1745]	326	!-- For parallel netcdf output the time axis must be limited. Return, if this
	327	!-- limit is exceeded. This could be the case, if the simulated time exceeds
	328	!-- the given end time by the length of the given output interval.
	329	IF ( netcdf_data_format > 4 ) THEN
	330	IF ( do3d_time_count(av) + 1 > ntdim_3d(av) ) THEN
	331	WRITE ( message_string, * ) 'Output of 3d data is not given at t=', &
[3046]	332	simulated_time, '&because the maximum ', &
[1745]	333	'number of output time levels is ', &
	334	'exceeded.'
	335	CALL message( 'data_output_3d', 'PA0387', 0, 1, 0, 6, 0 )
	336	CALL cpu_log( log_point(14), 'data_output_3d', 'stop' )
	337	RETURN
	338	ENDIF
	339	ENDIF
	340
	341	!
[1031]	342	!-- Update the netCDF time axis
[1308]	343	!-- In case of parallel output, this is only done by PE0 to increase the
	344	!-- performance.
[1]	345	#if defined( __netcdf )
[1308]	346	do3d_time_count(av) = do3d_time_count(av) + 1
	347	IF ( myid == 0 ) THEN
[1327]	348	nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_time_3d(av), &
	349	(/ time_since_reference_point /), &
	350	start = (/ do3d_time_count(av) /), &
	351	count = (/ 1 /) )
[1783]	352	CALL netcdf_handle_error( 'data_output_3d', 376 )
[1]	353	ENDIF
	354	#endif
	355
	356	!
	357	!-- Loop over all variables to be written.
	358	if = 1
	359
	360	DO WHILE ( do3d(av,if)(1:1) /= ' ' )
[2007]	361
[1]	362	!
[2007]	363	!-- Temporary solution to account for data output within the new urban
	364	!-- surface model (urban_surface_mod.f90), see also SELECT CASE ( trimvar ).
[1]	365	!-- Store the array chosen on the temporary array.
[2007]	366	trimvar = TRIM( do3d(av,if) )
[2011]	367	IF ( urban_surface .AND. trimvar(1:4) == 'usm_' ) THEN
[2007]	368	trimvar = 'usm_output'
	369	resorted = .TRUE.
	370	nzb_do = nzub
	371	nzt_do = nzut
	372	ELSE
	373	resorted = .FALSE.
	374	nzb_do = nzb
	375	nzt_do = nz_do3d
	376	ENDIF
[1551]	377	!
[1980]	378	!-- Set flag to steer output of radiation, land-surface, or user-defined
	379	!-- quantities
	380	found = .FALSE.
	381	!
[1551]	382	!-- Allocate a temporary array with the desired output dimensions.
[2512]	383	ALLOCATE( local_pf(nxl:nxr,nys:nyn,nzb_do:nzt_do) )
[2696]	384	!
	385	!-- Before each output, set array local_pf to fill value
	386	local_pf = fill_value
	387	!
	388	!-- Set masking flag for topography for not resorted arrays
	389	flag_nr = 0
[1551]	390
[2007]	391	SELECT CASE ( trimvar )
[1]	392
	393	CASE ( 'e' )
	394	IF ( av == 0 ) THEN
	395	to_be_resorted => e
	396	ELSE
[3004]	397	IF ( .NOT. ALLOCATED( e_av ) ) THEN
	398	ALLOCATE( e_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
	399	e_av = REAL( fill_value, KIND = wp )
	400	ENDIF
[1]	401	to_be_resorted => e_av
	402	ENDIF
	403
[771]	404	CASE ( 'lpt' )
	405	IF ( av == 0 ) THEN
	406	to_be_resorted => pt
	407	ELSE
[3004]	408	IF ( .NOT. ALLOCATED( lpt_av ) ) THEN
	409	ALLOCATE( lpt_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
	410	lpt_av = REAL( fill_value, KIND = wp )
	411	ENDIF
[771]	412	to_be_resorted => lpt_av
	413	ENDIF
	414
[1]	415	CASE ( 'p' )
	416	IF ( av == 0 ) THEN
[727]	417	IF ( psolver /= 'sor' ) CALL exchange_horiz( p, nbgp )
[1]	418	to_be_resorted => p
	419	ELSE
[3004]	420	IF ( .NOT. ALLOCATED( p_av ) ) THEN
	421	ALLOCATE( p_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
	422	p_av = REAL( fill_value, KIND = wp )
	423	ENDIF
[727]	424	IF ( psolver /= 'sor' ) CALL exchange_horiz( p_av, nbgp )
[1]	425	to_be_resorted => p_av
	426	ENDIF
	427
	428	CASE ( 'pc' ) ! particle concentration (requires ghostpoint exchange)
	429	IF ( av == 0 ) THEN
[1359]	430	IF ( simulated_time >= particle_advection_start ) THEN
	431	tend = prt_count
	432	ELSE
	433	tend = 0.0_wp
	434	ENDIF
[2512]	435	DO i = nxl, nxr
	436	DO j = nys, nyn
[1551]	437	DO k = nzb_do, nzt_do
[1]	438	local_pf(i,j,k) = tend(k,j,i)
	439	ENDDO
	440	ENDDO
	441	ENDDO
	442	resorted = .TRUE.
	443	ELSE
[3004]	444	IF ( .NOT. ALLOCATED( pc_av ) ) THEN
	445	ALLOCATE( pc_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
	446	pc_av = REAL( fill_value, KIND = wp )
	447	ENDIF
[1]	448	to_be_resorted => pc_av
	449	ENDIF
	450
[1359]	451	CASE ( 'pr' ) ! mean particle radius (effective radius)
[1]	452	IF ( av == 0 ) THEN
[1359]	453	IF ( simulated_time >= particle_advection_start ) THEN
	454	DO i = nxl, nxr
	455	DO j = nys, nyn
[1551]	456	DO k = nzb_do, nzt_do
[1359]	457	number_of_particles = prt_count(k,j,i)
	458	IF (number_of_particles <= 0) CYCLE
	459	particles => grid_particles(k,j,i)%particles(1:number_of_particles)
	460	s_r2 = 0.0_wp
	461	s_r3 = 0.0_wp
	462	DO n = 1, number_of_particles
	463	IF ( particles(n)%particle_mask ) THEN
	464	s_r2 = s_r2 + particles(n)%radius*2 &
	465	particles(n)%weight_factor
	466	s_r3 = s_r3 + particles(n)%radius*3 &
	467	particles(n)%weight_factor
	468	ENDIF
	469	ENDDO
	470	IF ( s_r2 > 0.0_wp ) THEN
	471	mean_r = s_r3 / s_r2
	472	ELSE
	473	mean_r = 0.0_wp
	474	ENDIF
	475	tend(k,j,i) = mean_r
[1]	476	ENDDO
	477	ENDDO
	478	ENDDO
[1359]	479	ELSE
	480	tend = 0.0_wp
	481	ENDIF
[2512]	482	DO i = nxl, nxr
	483	DO j = nys, nyn
[1551]	484	DO k = nzb_do, nzt_do
[1]	485	local_pf(i,j,k) = tend(k,j,i)
	486	ENDDO
	487	ENDDO
	488	ENDDO
	489	resorted = .TRUE.
	490	ELSE
[3004]	491	IF ( .NOT. ALLOCATED( pr_av ) ) THEN
	492	ALLOCATE( pr_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
	493	pr_av = REAL( fill_value, KIND = wp )
	494	ENDIF
[1]	495	to_be_resorted => pr_av
	496	ENDIF
	497
	498	CASE ( 'pt' )
	499	IF ( av == 0 ) THEN
[3274]	500	IF ( .NOT. bulk_cloud_model ) THEN
[1]	501	to_be_resorted => pt
	502	ELSE
[2512]	503	DO i = nxl, nxr
	504	DO j = nys, nyn
[1551]	505	DO k = nzb_do, nzt_do
[3274]	506	local_pf(i,j,k) = pt(k,j,i) + lv_d_cp * &
	507	d_exner(k) * &
[1]	508	ql(k,j,i)
	509	ENDDO
	510	ENDDO
	511	ENDDO
	512	resorted = .TRUE.
	513	ENDIF
	514	ELSE
[3004]	515	IF ( .NOT. ALLOCATED( pt_av ) ) THEN
	516	ALLOCATE( pt_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
	517	pt_av = REAL( fill_value, KIND = wp )
	518	ENDIF
[1]	519	to_be_resorted => pt_av
	520	ENDIF
	521
	522	CASE ( 'q' )
	523	IF ( av == 0 ) THEN
	524	to_be_resorted => q
	525	ELSE
[3004]	526	IF ( .NOT. ALLOCATED( q_av ) ) THEN
	527	ALLOCATE( q_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
	528	q_av = REAL( fill_value, KIND = wp )
	529	ENDIF
[1]	530	to_be_resorted => q_av
	531	ENDIF
[691]	532
[1053]	533	CASE ( 'ql' )
	534	IF ( av == 0 ) THEN
[1115]	535	to_be_resorted => ql
[1053]	536	ELSE
[3004]	537	IF ( .NOT. ALLOCATED( ql_av ) ) THEN
	538	ALLOCATE( ql_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
	539	ql_av = REAL( fill_value, KIND = wp )
	540	ENDIF
[1115]	541	to_be_resorted => ql_av
[1053]	542	ENDIF
	543
[1]	544	CASE ( 'ql_c' )
	545	IF ( av == 0 ) THEN
	546	to_be_resorted => ql_c
	547	ELSE
[3004]	548	IF ( .NOT. ALLOCATED( ql_c_av ) ) THEN
	549	ALLOCATE( ql_c_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
	550	ql_c_av = REAL( fill_value, KIND = wp )
	551	ENDIF
[1]	552	to_be_resorted => ql_c_av
	553	ENDIF
	554
	555	CASE ( 'ql_v' )
	556	IF ( av == 0 ) THEN
	557	to_be_resorted => ql_v
	558	ELSE
[3004]	559	IF ( .NOT. ALLOCATED( ql_v_av ) ) THEN
	560	ALLOCATE( ql_v_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
	561	ql_v_av = REAL( fill_value, KIND = wp )
	562	ENDIF
[1]	563	to_be_resorted => ql_v_av
	564	ENDIF
	565
	566	CASE ( 'ql_vp' )
	567	IF ( av == 0 ) THEN
[1359]	568	IF ( simulated_time >= particle_advection_start ) THEN
	569	DO i = nxl, nxr
	570	DO j = nys, nyn
[1551]	571	DO k = nzb_do, nzt_do
[1359]	572	number_of_particles = prt_count(k,j,i)
	573	IF (number_of_particles <= 0) CYCLE
	574	particles => grid_particles(k,j,i)%particles(1:number_of_particles)
	575	DO n = 1, number_of_particles
	576	IF ( particles(n)%particle_mask ) THEN
	577	tend(k,j,i) = tend(k,j,i) + &
	578	particles(n)%weight_factor / &
	579	prt_count(k,j,i)
	580	ENDIF
	581	ENDDO
[1007]	582	ENDDO
	583	ENDDO
	584	ENDDO
[1359]	585	ELSE
	586	tend = 0.0_wp
	587	ENDIF
[2512]	588	DO i = nxl, nxr
	589	DO j = nys, nyn
[1551]	590	DO k = nzb_do, nzt_do
[1007]	591	local_pf(i,j,k) = tend(k,j,i)
	592	ENDDO
	593	ENDDO
	594	ENDDO
	595	resorted = .TRUE.
[1]	596	ELSE
[3004]	597	IF ( .NOT. ALLOCATED( ql_vp_av ) ) THEN
	598	ALLOCATE( ql_vp_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
	599	ql_vp_av = REAL( fill_value, KIND = wp )
	600	ENDIF
[1]	601	to_be_resorted => ql_vp_av
	602	ENDIF
	603
	604	CASE ( 'qv' )
	605	IF ( av == 0 ) THEN
[2512]	606	DO i = nxl, nxr
	607	DO j = nys, nyn
[1551]	608	DO k = nzb_do, nzt_do
[1]	609	local_pf(i,j,k) = q(k,j,i) - ql(k,j,i)
	610	ENDDO
	611	ENDDO
	612	ENDDO
	613	resorted = .TRUE.
	614	ELSE
[3004]	615	IF ( .NOT. ALLOCATED( qv_av ) ) THEN
	616	ALLOCATE( qv_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
	617	qv_av = REAL( fill_value, KIND = wp )
	618	ENDIF
[1]	619	to_be_resorted => qv_av
	620	ENDIF
	621
	622	CASE ( 's' )
	623	IF ( av == 0 ) THEN
[1960]	624	to_be_resorted => s
[1]	625	ELSE
[3004]	626	IF ( .NOT. ALLOCATED( s_av ) ) THEN
	627	ALLOCATE( s_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
	628	s_av = REAL( fill_value, KIND = wp )
	629	ENDIF
[355]	630	to_be_resorted => s_av
[1]	631	ENDIF
[691]	632
[1]	633	CASE ( 'u' )
[2696]	634	flag_nr = 1
[1]	635	IF ( av == 0 ) THEN
	636	to_be_resorted => u
	637	ELSE
[3004]	638	IF ( .NOT. ALLOCATED( u_av ) ) THEN
	639	ALLOCATE( u_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
	640	u_av = REAL( fill_value, KIND = wp )
	641	ENDIF
[1]	642	to_be_resorted => u_av
	643	ENDIF
	644
	645	CASE ( 'v' )
[2696]	646	flag_nr = 2
[1]	647	IF ( av == 0 ) THEN
	648	to_be_resorted => v
	649	ELSE
[3004]	650	IF ( .NOT. ALLOCATED( v_av ) ) THEN
	651	ALLOCATE( v_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
	652	v_av = REAL( fill_value, KIND = wp )
	653	ENDIF
[1]	654	to_be_resorted => v_av
	655	ENDIF
	656
	657	CASE ( 'vpt' )
	658	IF ( av == 0 ) THEN
	659	to_be_resorted => vpt
	660	ELSE
[3004]	661	IF ( .NOT. ALLOCATED( vpt_av ) ) THEN
	662	ALLOCATE( vpt_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
	663	vpt_av = REAL( fill_value, KIND = wp )
	664	ENDIF
[1]	665	to_be_resorted => vpt_av
	666	ENDIF
	667
	668	CASE ( 'w' )
[2696]	669	flag_nr = 3
[1]	670	IF ( av == 0 ) THEN
	671	to_be_resorted => w
	672	ELSE
[3004]	673	IF ( .NOT. ALLOCATED( w_av ) ) THEN
	674	ALLOCATE( w_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
	675	w_av = REAL( fill_value, KIND = wp )
	676	ENDIF
[1]	677	to_be_resorted => w_av
	678	ENDIF
[2007]	679	!
	680	!-- Block of urban surface model outputs
	681	CASE ( 'usm_output' )
[3274]	682	CALL usm_data_output_3d( av, do3d(av,if), found, local_pf, &
[2007]	683	nzb_do, nzt_do )
[1]	684
	685	CASE DEFAULT
[1972]	686
[1]	687	!
[3294]	688	!-- Quantities of other modules
[3274]	689	IF ( .NOT. found .AND. bulk_cloud_model ) THEN
	690	CALL bcm_data_output_3d( av, do3d(av,if), found, local_pf, &
	691	nzb_do, nzt_do )
	692	resorted = .TRUE.
	693	ENDIF
	694
[3294]	695	IF ( .NOT. found .AND. air_chemistry ) THEN
	696	CALL chem_data_output_3d( av, do3d(av,if), found, &
	697	local_pf, fill_value, nzb_do, nzt_do )
	698	resorted = .TRUE.
	699	ENDIF
	700
	701	IF ( .NOT. found .AND. gust_module_enabled ) THEN
	702	CALL gust_data_output_3d( av, do3d(av,if), found, local_pf, &
	703	nzb_do, nzt_do )
	704	resorted = .TRUE.
	705	ENDIF
	706
[3274]	707	IF ( .NOT. found .AND. land_surface ) THEN
[1972]	708	!
	709	!-- For soil model quantities, it is required to re-allocate local_pf
	710	nzb_do = nzb_soil
	711	nzt_do = nzt_soil
	712
	713	DEALLOCATE ( local_pf )
[2512]	714	ALLOCATE( local_pf(nxl:nxr,nys:nyn,nzb_do:nzt_do) )
[2696]	715	local_pf = fill_value
[1972]	716
	717	CALL lsm_data_output_3d( av, do3d(av,if), found, local_pf )
	718	resorted = .TRUE.
[1976]	719
	720	!
	721	!-- If no soil model variable was found, re-allocate local_pf
	722	IF ( .NOT. found ) THEN
	723	nzb_do = nzb
	724	nzt_do = nz_do3d
	725
	726	DEALLOCATE ( local_pf )
[2512]	727	ALLOCATE( local_pf(nxl:nxr,nys:nyn,nzb_do:nzt_do) )
[1976]	728	ENDIF
	729
[1972]	730	ENDIF
	731
[3294]	732	IF ( .NOT. found .AND. ocean_mode ) THEN
	733	CALL ocean_data_output_3d( av, do3d(av,if), found, local_pf, &
	734	nzb_do, nzt_do )
[1976]	735	resorted = .TRUE.
	736	ENDIF
	737
[3294]	738	IF ( .NOT. found .AND. plant_canopy ) THEN
	739	CALL pcm_data_output_3d( av, do3d(av,if), found, local_pf, &
	740	fill_value, nzb_do, nzt_do )
[2817]	741	resorted = .TRUE.
	742	ENDIF
	743
[3294]	744	IF ( .NOT. found .AND. radiation ) THEN
	745	CALL radiation_data_output_3d( av, do3d(av,if), found, &
	746	local_pf, nzb_do, nzt_do )
[2696]	747	resorted = .TRUE.
	748	ENDIF
	749
[3294]	750	IF ( .NOT. found ) THEN
	751	CALL tcm_data_output_3d( av, do3d(av,if), found, local_pf, &
	752	nzb_do, nzt_do )
[2209]	753	resorted = .TRUE.
	754	ENDIF
	755
	756	!
[3294]	757	!-- User defined quantities
[1972]	758	IF ( .NOT. found ) THEN
	759	CALL user_data_output_3d( av, do3d(av,if), found, local_pf, &
	760	nzb_do, nzt_do )
	761	resorted = .TRUE.
	762	ENDIF
[1]	763
[254]	764	IF ( .NOT. found ) THEN
[1320]	765	message_string = 'no output available for: ' // &
[274]	766	TRIM( do3d(av,if) )
[254]	767	CALL message( 'data_output_3d', 'PA0182', 0, 0, 0, 6, 0 )
[1]	768	ENDIF
	769
	770	END SELECT
	771
	772	!
	773	!-- Resort the array to be output, if not done above
	774	IF ( .NOT. resorted ) THEN
[2512]	775	DO i = nxl, nxr
	776	DO j = nys, nyn
[1551]	777	DO k = nzb_do, nzt_do
[2696]	778	local_pf(i,j,k) = MERGE( &
	779	to_be_resorted(k,j,i), &
	780	REAL( fill_value, KIND = wp ), &
	781	BTEST( wall_flags_0(k,j,i), flag_nr ) )
[1]	782	ENDDO
	783	ENDDO
	784	ENDDO
	785	ENDIF
	786
	787	!
[1327]	788	!-- Output of the 3D-array
	789	#if defined( __parallel )
	790	IF ( netcdf_data_format < 5 ) THEN
[1]	791	!
[1327]	792	!-- Non-parallel netCDF output. Data is output in parallel in
	793	!-- FORTRAN binary format here, and later collected into one file by
	794	!-- combine_plot_fields
	795	IF ( myid == 0 ) THEN
	796	WRITE ( 30 ) time_since_reference_point, &
	797	do3d_time_count(av), av
[1]	798	ENDIF
[1327]	799	DO i = 0, io_blocks-1
	800	IF ( i == io_group ) THEN
[2512]	801	WRITE ( 30 ) nxl, nxr, nys, nyn, nzb_do, nzt_do
[1551]	802	WRITE ( 30 ) local_pf(:,:,nzb_do:nzt_do)
[1327]	803	ENDIF
[1972]	804
[1327]	805	CALL MPI_BARRIER( comm2d, ierr )
[1972]	806
[1327]	807	ENDDO
[559]	808
[1327]	809	ELSE
[646]	810	#if defined( __netcdf )
[493]	811	!
[1327]	812	!-- Parallel output in netCDF4/HDF5 format.
[2512]	813	! IF ( nxr == nx .AND. nyn /= ny ) THEN
	814	! nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,if), &
	815	! local_pf(nxl:nxr+1,nys:nyn,nzb_do:nzt_do), &
	816	! start = (/ nxl+1, nys+1, nzb_do+1, do3d_time_count(av) /), &
	817	! count = (/ nxr-nxl+2, nyn-nys+1, nzt_do-nzb_do+1, 1 /) )
	818	! ELSEIF ( nxr /= nx .AND. nyn == ny ) THEN
	819	! nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,if), &
	820	! local_pf(nxl:nxr,nys:nyn+1,nzb_do:nzt_do), &
	821	! start = (/ nxl+1, nys+1, nzb_do+1, do3d_time_count(av) /), &
	822	! count = (/ nxr-nxl+1, nyn-nys+2, nzt_do-nzb_do+1, 1 /) )
	823	! ELSEIF ( nxr == nx .AND. nyn == ny ) THEN
	824	! nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,if), &
	825	! local_pf(nxl:nxr+1,nys:nyn+1,nzb_do:nzt_do ), &
	826	! start = (/ nxl+1, nys+1, nzb_do+1, do3d_time_count(av) /), &
	827	! count = (/ nxr-nxl+2, nyn-nys+2, nzt_do-nzb_do+1, 1 /) )
	828	! ELSE
[1327]	829	nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,if), &
[1551]	830	local_pf(nxl:nxr,nys:nyn,nzb_do:nzt_do), &
	831	start = (/ nxl+1, nys+1, nzb_do+1, do3d_time_count(av) /), &
	832	count = (/ nxr-nxl+1, nyn-nys+1, nzt_do-nzb_do+1, 1 /) )
[2512]	833	! ENDIF
[1783]	834	CALL netcdf_handle_error( 'data_output_3d', 386 )
[646]	835	#endif
[1327]	836	ENDIF
[1]	837	#else
	838	#if defined( __netcdf )
[1327]	839	nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,if), &
[1551]	840	local_pf(nxl:nxr+1,nys:nyn+1,nzb_do:nzt_do), &
[1327]	841	start = (/ 1, 1, 1, do3d_time_count(av) /), &
[2512]	842	count = (/ nx+1, ny+1, nzt_do-nzb_do+1, 1 /) )
[1783]	843	CALL netcdf_handle_error( 'data_output_3d', 446 )
[1]	844	#endif
	845	#endif
	846
	847	if = if + 1
	848
	849	!
[1551]	850	!-- Deallocate temporary array
	851	DEALLOCATE ( local_pf )
[1]	852
[1551]	853	ENDDO
[1]	854
[1318]	855	CALL cpu_log( log_point(14), 'data_output_3d', 'stop' )
[1]	856
	857	END SUBROUTINE data_output_3d

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