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source: palm/trunk/SOURCE/data_output_3d.f90 @ 3270

Last change on this file since 3270 was 3241, checked in by raasch, 6 years ago
various changes to avoid compiler warnings (mainly removal of unused variables)
Property svn:keywords set to `Id`
File size: 33.0 KB

Rev	Line
[1682]	1	!> @file data_output_3d.f90
[2000]	2	!------------------------------------------------------------------------------!
[2696]	3	! This file is part of the PALM model system.
[1036]	4	!
[2000]	5	! PALM is free software: you can redistribute it and/or modify it under the
	6	! terms of the GNU General Public License as published by the Free Software
	7	! Foundation, either version 3 of the License, or (at your option) any later
	8	! version.
[1036]	9	!
	10	! PALM is distributed in the hope that it will be useful, but WITHOUT ANY
	11	! WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR
	12	! A PARTICULAR PURPOSE. See the GNU General Public License for more details.
	13	!
	14	! You should have received a copy of the GNU General Public License along with
	15	! PALM. If not, see <http://www.gnu.org/licenses/>.
	16	!
[2718]	17	! Copyright 1997-2018 Leibniz Universitaet Hannover
[2000]	18	!------------------------------------------------------------------------------!
[1036]	19	!
[254]	20	! Current revisions:
[1106]	21	! ------------------
[1961]	22	!
[3049]	23	!
[1552]	24	! Former revisions:
	25	! -----------------
	26	! $Id: data_output_3d.f90 3241 2018-09-12 15:02:00Z raasch $
[3241]	27	! unused variables and format statements removed
	28	!
	29	! 3049 2018-05-29 13:52:36Z Giersch
[3049]	30	! Error messages revised
	31	!
	32	! 3045 2018-05-28 07:55:41Z Giersch
[3045]	33	! Error message revised
	34	!
	35	! 3014 2018-05-09 08:42:38Z maronga
[3014]	36	! Added nzb_do and nzt_do for some modules for 3d output
	37	!
	38	! 3004 2018-04-27 12:33:25Z Giersch
[3004]	39	! Allocation checks implemented (averaged data will be assigned to fill values
	40	! if no allocation happened so far)
	41	!
	42	! 2967 2018-04-13 11:22:08Z raasch
[2967]	43	! bugfix: missing parallel cpp-directives added
	44	!
	45	! 2817 2018-02-19 16:32:21Z knoop
[2817]	46	! Preliminary gust module interface implemented
	47	!
	48	! 2766 2018-01-22 17:17:47Z kanani
[2766]	49	! Removed preprocessor directive __chem
	50	!
	51	! 2756 2018-01-16 18:11:14Z suehring
[2756]	52	! Fill values for 3D output of chemical species introduced.
	53	!
	54	! 2746 2018-01-15 12:06:04Z suehring
[2746]	55	! Move flag plant canopy to modules
	56	!
	57	! 2718 2018-01-02 08:49:38Z maronga
[2716]	58	! Corrected "Former revisions" section
	59	!
	60	! 2696 2017-12-14 17:12:51Z kanani
	61	! Change in file header (GPL part)
[2696]	62	! Implementation of turbulence_closure_mod (TG)
	63	! Implementation of chemistry module (FK)
	64	! Set fill values at topography grid points or e.g. non-natural-type surface
	65	! in case of LSM output (MS)
	66	!
	67	! 2512 2017-10-04 08:26:59Z raasch
[2512]	68	! upper bounds of 3d output changed from nx+1,ny+1 to nx,ny
	69	! no output of ghost layer data
	70	!
	71	! 2292 2017-06-20 09:51:42Z schwenkel
[2292]	72	! Implementation of new microphysic scheme: cloud_scheme = 'morrison'
	73	! includes two more prognostic equations for cloud drop concentration (nc)
	74	! and cloud water content (qc).
	75	!
	76	! 2233 2017-05-30 18:08:54Z suehring
[1552]	77	!
[2233]	78	! 2232 2017-05-30 17:47:52Z suehring
	79	! Adjustments to new topography concept
	80	!
[2210]	81	! 2209 2017-04-19 09:34:46Z kanani
	82	! Added plant canopy model output
	83	!
[2032]	84	! 2031 2016-10-21 15:11:58Z knoop
	85	! renamed variable rho to rho_ocean and rho_av to rho_ocean_av
	86	!
[2012]	87	! 2011 2016-09-19 17:29:57Z kanani
	88	! Flag urban_surface is now defined in module control_parameters,
	89	! changed prefix for urban surface model output to "usm_",
	90	! introduced control parameter varnamelength for LEN of trimvar.
	91	!
[2008]	92	! 2007 2016-08-24 15:47:17Z kanani
	93	! Added support for new urban surface model (temporary modifications of
	94	! SELECT CASE ( ) necessary, see variable trimvar)
	95	!
[2001]	96	! 2000 2016-08-20 18:09:15Z knoop
	97	! Forced header and separation lines into 80 columns
	98	!
[1981]	99	! 1980 2016-07-29 15:51:57Z suehring
	100	! Bugfix, in order to steer user-defined output, setting flag found explicitly
	101	! to .F.
	102	!
[1977]	103	! 1976 2016-07-27 13:28:04Z maronga
	104	! Output of radiation quantities is now done directly in the respective module
	105	!
[1973]	106	! 1972 2016-07-26 07:52:02Z maronga
	107	! Output of land surface quantities is now done directly in the respective module.
	108	! Unnecessary directive __parallel removed.
	109	!
[1961]	110	! 1960 2016-07-12 16:34:24Z suehring
	111	! Scalar surface flux added
	112	!
[1851]	113	! 1849 2016-04-08 11:33:18Z hoffmann
	114	! prr moved to arrays_3d
	115	!
[1823]	116	! 1822 2016-04-07 07:49:42Z hoffmann
	117	! prr vertical dimensions set to nzb_do to nzt_do. Unused variables deleted.
	118	!
[1809]	119	! 1808 2016-04-05 19:44:00Z raasch
	120	! test output removed
	121	!
[1784]	122	! 1783 2016-03-06 18:36:17Z raasch
	123	! name change of netcdf routines and module + related changes
	124	!
[1746]	125	! 1745 2016-02-05 13:06:51Z gronemeier
	126	! Bugfix: test if time axis limit exceeds moved to point after call of check_open
	127	!
[1692]	128	! 1691 2015-10-26 16:17:44Z maronga
	129	! Added output of radiative heating rates for RRTMG
	130	!
[1683]	131	! 1682 2015-10-07 23:56:08Z knoop
	132	! Code annotations made doxygen readable
	133	!
[1586]	134	! 1585 2015-04-30 07:05:52Z maronga
	135	! Added support for RRTMG
	136	!
[1552]	137	! 1551 2015-03-03 14:18:16Z maronga
[1551]	138	! Added suppport for land surface model and radiation model output. In the course
	139	! of this action, the limits for vertical loops have been changed (from nzb and
	140	! nzt+1 to nzb_do and nzt_do, respectively in order to allow soil model output).
	141	! Moreover, a new vertical grid zs was introduced.
[1329]	142	!
[1360]	143	! 1359 2014-04-11 17:15:14Z hoffmann
	144	! New particle structure integrated.
	145	!
[1354]	146	! 1353 2014-04-08 15:21:23Z heinze
	147	! REAL constants provided with KIND-attribute
	148	!
[1329]	149	! 1327 2014-03-21 11:00:16Z raasch
	150	! parts concerning avs output removed,
	151	! -netcdf output queries
	152	!
[1321]	153	! 1320 2014-03-20 08:40:49Z raasch
[1320]	154	! ONLY-attribute added to USE-statements,
	155	! kind-parameters added to all INTEGER and REAL declaration statements,
	156	! kinds are defined in new module kinds,
	157	! old module precision_kind is removed,
	158	! revision history before 2012 removed,
	159	! comment fields (!:) to be used for variable explanations added to
	160	! all variable declaration statements
[674]	161	!
[1319]	162	! 1318 2014-03-17 13:35:16Z raasch
	163	! barrier argument removed from cpu_log,
	164	! module interfaces removed
	165	!
[1309]	166	! 1308 2014-03-13 14:58:42Z fricke
	167	! Check, if the limit of the time dimension is exceeded for parallel output
	168	! To increase the performance for parallel output, the following is done:
	169	! - Update of time axis is only done by PE0
	170	!
[1245]	171	! 1244 2013-10-31 08:16:56Z raasch
	172	! Bugfix for index bounds in case of 3d-parallel output
	173	!
[1116]	174	! 1115 2013-03-26 18:16:16Z hoffmann
	175	! ql is calculated by calc_liquid_water_content
	176	!
[1107]	177	! 1106 2013-03-04 05:31:38Z raasch
	178	! array_kind renamed precision_kind
	179	!
[1077]	180	! 1076 2012-12-05 08:30:18Z hoffmann
	181	! Bugfix in output of ql
	182	!
[1054]	183	! 1053 2012-11-13 17:11:03Z hoffmann
	184	! +nr, qr, prr, qc and averaged quantities
	185	!
[1037]	186	! 1036 2012-10-22 13:43:42Z raasch
	187	! code put under GPL (PALM 3.9)
	188	!
[1035]	189	! 1031 2012-10-19 14:35:30Z raasch
	190	! netCDF4 without parallel file support implemented
	191	!
[1008]	192	! 1007 2012-09-19 14:30:36Z franke
	193	! Bugfix: missing calculation of ql_vp added
	194	!
[1]	195	! Revision 1.1 1997/09/03 06:29:36 raasch
	196	! Initial revision
	197	!
	198	!
	199	! Description:
	200	! ------------
[1682]	201	!> Output of the 3D-arrays in netCDF and/or AVS format.
[1]	202	!------------------------------------------------------------------------------!
[1682]	203	SUBROUTINE data_output_3d( av )
	204
[1]	205
[1320]	206	USE arrays_3d, &
[2292]	207	ONLY: e, nc, nr, p, pt, prr, q, qc, ql, ql_c, ql_v, qr, rho_ocean, s, &
	208	sa, tend, u, v, vpt, w
[1320]	209
[1]	210	USE averaging
[1320]	211
[2696]	212	USE chemistry_model_mod, &
	213	ONLY: chem_data_output_3d
	214
[1320]	215	USE cloud_parameters, &
[1849]	216	ONLY: l_d_cp, pt_d_t
[1320]	217
	218	USE control_parameters, &
[2696]	219	ONLY: air_chemistry, cloud_physics, do3d, do3d_no, do3d_time_count, &
	220	io_blocks, io_group, land_surface, message_string, &
[2746]	221	ntdim_3d, nz_do3d, plant_canopy, &
[2232]	222	psolver, simulated_time, time_since_reference_point, &
	223	urban_surface, varnamelength
[1320]	224
	225	USE cpulog, &
	226	ONLY: log_point, cpu_log
[2817]	227
	228	USE gust_mod, &
	229	ONLY: gust_data_output_3d, gust_module_enabled
[1320]	230
	231	USE indices, &
[3241]	232	ONLY: nbgp, nxl, nxlg, nxr, nxrg, nyn, nyng, nys, nysg, nzb, nzt, &
	233	wall_flags_0
[1320]	234
	235	USE kinds
	236
[1551]	237	USE land_surface_model_mod, &
[2232]	238	ONLY: lsm_data_output_3d, nzb_soil, nzt_soil
[1551]	239
[1783]	240	#if defined( __netcdf )
	241	USE NETCDF
	242	#endif
	243
	244	USE netcdf_interface, &
[2696]	245	ONLY: fill_value, id_set_3d, id_var_do3d, id_var_time_3d, nc_stat, &
[1783]	246	netcdf_data_format, netcdf_handle_error
[1320]	247
	248	USE particle_attributes, &
[1359]	249	ONLY: grid_particles, number_of_particles, particles, &
	250	particle_advection_start, prt_count
[1320]	251
[1]	252	USE pegrid
	253
[2209]	254	USE plant_canopy_model_mod, &
[2746]	255	ONLY: pcm_data_output_3d
[2209]	256
[1585]	257	USE radiation_model_mod, &
[2696]	258	ONLY: nzub, nzut, radiation, radiation_data_output_3d
[1585]	259
[2696]	260	USE turbulence_closure_mod, &
	261	ONLY: tcm_data_output_3d
	262
[2007]	263	USE urban_surface_mod, &
[2696]	264	ONLY: usm_data_output_3d
[1585]	265
[2007]	266
[1]	267	IMPLICIT NONE
	268
[1682]	269	INTEGER(iwp) :: av !<
[2696]	270	INTEGER(iwp) :: flag_nr !< number of masking flag
[1682]	271	INTEGER(iwp) :: i !<
	272	INTEGER(iwp) :: if !<
	273	INTEGER(iwp) :: j !<
	274	INTEGER(iwp) :: k !<
	275	INTEGER(iwp) :: n !<
	276	INTEGER(iwp) :: nzb_do !< vertical lower limit for data output
	277	INTEGER(iwp) :: nzt_do !< vertical upper limit for data output
[1]	278
[1682]	279	LOGICAL :: found !<
	280	LOGICAL :: resorted !<
[1]	281
[1682]	282	REAL(wp) :: mean_r !<
	283	REAL(wp) :: s_r2 !<
	284	REAL(wp) :: s_r3 !<
[1]	285
[1682]	286	REAL(sp), DIMENSION(:,:,:), ALLOCATABLE :: local_pf !<
[1]	287
[1682]	288	REAL(wp), DIMENSION(:,:,:), POINTER :: to_be_resorted !<
[1]	289
[2011]	290	CHARACTER (LEN=varnamelength) :: trimvar !< TRIM of output-variable string
[2007]	291
[1]	292	!
	293	!-- Return, if nothing to output
	294	IF ( do3d_no(av) == 0 ) RETURN
	295
	296	CALL cpu_log (log_point(14),'data_output_3d','start')
	297
	298	!
	299	!-- Open output file.
[2512]	300	!-- For classic or 64bit netCDF output on more than one PE, each PE opens its
	301	!-- own file and writes the data of its subdomain in binary format. After the
	302	!-- run, these files are combined to one NetCDF file by combine_plot_fields.
[1031]	303	!-- For netCDF4/HDF5 output, data is written in parallel into one file.
[1327]	304	IF ( netcdf_data_format < 5 ) THEN
[2967]	305	#if defined( __parallel )
[1327]	306	CALL check_open( 30 )
[2967]	307	#endif
[1327]	308	IF ( myid == 0 ) CALL check_open( 106+av*10 )
[493]	309	ELSE
[1327]	310	CALL check_open( 106+av*10 )
[493]	311	ENDIF
[1]	312
	313	!
[1745]	314	!-- For parallel netcdf output the time axis must be limited. Return, if this
	315	!-- limit is exceeded. This could be the case, if the simulated time exceeds
	316	!-- the given end time by the length of the given output interval.
	317	IF ( netcdf_data_format > 4 ) THEN
	318	IF ( do3d_time_count(av) + 1 > ntdim_3d(av) ) THEN
	319	WRITE ( message_string, * ) 'Output of 3d data is not given at t=', &
[3046]	320	simulated_time, '&because the maximum ', &
[1745]	321	'number of output time levels is ', &
	322	'exceeded.'
	323	CALL message( 'data_output_3d', 'PA0387', 0, 1, 0, 6, 0 )
	324	CALL cpu_log( log_point(14), 'data_output_3d', 'stop' )
	325	RETURN
	326	ENDIF
	327	ENDIF
	328
	329	!
[1031]	330	!-- Update the netCDF time axis
[1308]	331	!-- In case of parallel output, this is only done by PE0 to increase the
	332	!-- performance.
[1]	333	#if defined( __netcdf )
[1308]	334	do3d_time_count(av) = do3d_time_count(av) + 1
	335	IF ( myid == 0 ) THEN
[1327]	336	nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_time_3d(av), &
	337	(/ time_since_reference_point /), &
	338	start = (/ do3d_time_count(av) /), &
	339	count = (/ 1 /) )
[1783]	340	CALL netcdf_handle_error( 'data_output_3d', 376 )
[1]	341	ENDIF
	342	#endif
	343
	344	!
	345	!-- Loop over all variables to be written.
	346	if = 1
	347
	348	DO WHILE ( do3d(av,if)(1:1) /= ' ' )
[2007]	349
[1]	350	!
[2007]	351	!-- Temporary solution to account for data output within the new urban
	352	!-- surface model (urban_surface_mod.f90), see also SELECT CASE ( trimvar ).
[1]	353	!-- Store the array chosen on the temporary array.
[2007]	354	trimvar = TRIM( do3d(av,if) )
[2011]	355	IF ( urban_surface .AND. trimvar(1:4) == 'usm_' ) THEN
[2007]	356	trimvar = 'usm_output'
	357	resorted = .TRUE.
	358	nzb_do = nzub
	359	nzt_do = nzut
	360	ELSE
	361	resorted = .FALSE.
	362	nzb_do = nzb
	363	nzt_do = nz_do3d
	364	ENDIF
[1551]	365	!
[1980]	366	!-- Set flag to steer output of radiation, land-surface, or user-defined
	367	!-- quantities
	368	found = .FALSE.
	369	!
[1551]	370	!-- Allocate a temporary array with the desired output dimensions.
[2512]	371	ALLOCATE( local_pf(nxl:nxr,nys:nyn,nzb_do:nzt_do) )
[2696]	372	!
	373	!-- Before each output, set array local_pf to fill value
	374	local_pf = fill_value
	375	!
	376	!-- Set masking flag for topography for not resorted arrays
	377	flag_nr = 0
[1551]	378
[2007]	379	SELECT CASE ( trimvar )
[1]	380
	381	CASE ( 'e' )
	382	IF ( av == 0 ) THEN
	383	to_be_resorted => e
	384	ELSE
[3004]	385	IF ( .NOT. ALLOCATED( e_av ) ) THEN
	386	ALLOCATE( e_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
	387	e_av = REAL( fill_value, KIND = wp )
	388	ENDIF
[1]	389	to_be_resorted => e_av
	390	ENDIF
	391
[771]	392	CASE ( 'lpt' )
	393	IF ( av == 0 ) THEN
	394	to_be_resorted => pt
	395	ELSE
[3004]	396	IF ( .NOT. ALLOCATED( lpt_av ) ) THEN
	397	ALLOCATE( lpt_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
	398	lpt_av = REAL( fill_value, KIND = wp )
	399	ENDIF
[771]	400	to_be_resorted => lpt_av
	401	ENDIF
	402
[2292]	403	CASE ( 'nc' )
	404	IF ( av == 0 ) THEN
	405	to_be_resorted => nc
	406	ELSE
[3004]	407	IF ( .NOT. ALLOCATED( nc_av ) ) THEN
	408	ALLOCATE( nc_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
	409	nc_av = REAL( fill_value, KIND = wp )
	410	ENDIF
[2292]	411	to_be_resorted => nc_av
	412	ENDIF
	413
[1053]	414	CASE ( 'nr' )
	415	IF ( av == 0 ) THEN
	416	to_be_resorted => nr
	417	ELSE
[3004]	418	IF ( .NOT. ALLOCATED( nr_av ) ) THEN
	419	ALLOCATE( nr_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
	420	nr_av = REAL( fill_value, KIND = wp )
	421	ENDIF
[1053]	422	to_be_resorted => nr_av
	423	ENDIF
	424
[1]	425	CASE ( 'p' )
	426	IF ( av == 0 ) THEN
[727]	427	IF ( psolver /= 'sor' ) CALL exchange_horiz( p, nbgp )
[1]	428	to_be_resorted => p
	429	ELSE
[3004]	430	IF ( .NOT. ALLOCATED( p_av ) ) THEN
	431	ALLOCATE( p_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
	432	p_av = REAL( fill_value, KIND = wp )
	433	ENDIF
[727]	434	IF ( psolver /= 'sor' ) CALL exchange_horiz( p_av, nbgp )
[1]	435	to_be_resorted => p_av
	436	ENDIF
	437
	438	CASE ( 'pc' ) ! particle concentration (requires ghostpoint exchange)
	439	IF ( av == 0 ) THEN
[1359]	440	IF ( simulated_time >= particle_advection_start ) THEN
	441	tend = prt_count
	442	ELSE
	443	tend = 0.0_wp
	444	ENDIF
[2512]	445	DO i = nxl, nxr
	446	DO j = nys, nyn
[1551]	447	DO k = nzb_do, nzt_do
[1]	448	local_pf(i,j,k) = tend(k,j,i)
	449	ENDDO
	450	ENDDO
	451	ENDDO
	452	resorted = .TRUE.
	453	ELSE
[3004]	454	IF ( .NOT. ALLOCATED( pc_av ) ) THEN
	455	ALLOCATE( pc_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
	456	pc_av = REAL( fill_value, KIND = wp )
	457	ENDIF
[1]	458	to_be_resorted => pc_av
	459	ENDIF
	460
[1359]	461	CASE ( 'pr' ) ! mean particle radius (effective radius)
[1]	462	IF ( av == 0 ) THEN
[1359]	463	IF ( simulated_time >= particle_advection_start ) THEN
	464	DO i = nxl, nxr
	465	DO j = nys, nyn
[1551]	466	DO k = nzb_do, nzt_do
[1359]	467	number_of_particles = prt_count(k,j,i)
	468	IF (number_of_particles <= 0) CYCLE
	469	particles => grid_particles(k,j,i)%particles(1:number_of_particles)
	470	s_r2 = 0.0_wp
	471	s_r3 = 0.0_wp
	472	DO n = 1, number_of_particles
	473	IF ( particles(n)%particle_mask ) THEN
	474	s_r2 = s_r2 + particles(n)%radius*2 &
	475	particles(n)%weight_factor
	476	s_r3 = s_r3 + particles(n)%radius*3 &
	477	particles(n)%weight_factor
	478	ENDIF
	479	ENDDO
	480	IF ( s_r2 > 0.0_wp ) THEN
	481	mean_r = s_r3 / s_r2
	482	ELSE
	483	mean_r = 0.0_wp
	484	ENDIF
	485	tend(k,j,i) = mean_r
[1]	486	ENDDO
	487	ENDDO
	488	ENDDO
[1359]	489	ELSE
	490	tend = 0.0_wp
	491	ENDIF
[2512]	492	DO i = nxl, nxr
	493	DO j = nys, nyn
[1551]	494	DO k = nzb_do, nzt_do
[1]	495	local_pf(i,j,k) = tend(k,j,i)
	496	ENDDO
	497	ENDDO
	498	ENDDO
	499	resorted = .TRUE.
	500	ELSE
[3004]	501	IF ( .NOT. ALLOCATED( pr_av ) ) THEN
	502	ALLOCATE( pr_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
	503	pr_av = REAL( fill_value, KIND = wp )
	504	ENDIF
[1]	505	to_be_resorted => pr_av
	506	ENDIF
	507
[1053]	508	CASE ( 'prr' )
	509	IF ( av == 0 ) THEN
[2512]	510	DO i = nxl, nxr
	511	DO j = nys, nyn
[1822]	512	DO k = nzb_do, nzt_do
[1053]	513	local_pf(i,j,k) = prr(k,j,i)
	514	ENDDO
	515	ENDDO
	516	ENDDO
	517	ELSE
[3004]	518	IF ( .NOT. ALLOCATED( prr_av ) ) THEN
	519	ALLOCATE( prr_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
	520	prr_av = REAL( fill_value, KIND = wp )
	521	ENDIF
[2512]	522	DO i = nxl, nxr
	523	DO j = nys, nyn
[1822]	524	DO k = nzb_do, nzt_do
[1053]	525	local_pf(i,j,k) = prr_av(k,j,i)
	526	ENDDO
	527	ENDDO
	528	ENDDO
	529	ENDIF
	530	resorted = .TRUE.
	531
[1]	532	CASE ( 'pt' )
	533	IF ( av == 0 ) THEN
	534	IF ( .NOT. cloud_physics ) THEN
	535	to_be_resorted => pt
	536	ELSE
[2512]	537	DO i = nxl, nxr
	538	DO j = nys, nyn
[1551]	539	DO k = nzb_do, nzt_do
[1320]	540	local_pf(i,j,k) = pt(k,j,i) + l_d_cp * &
	541	pt_d_t(k) * &
[1]	542	ql(k,j,i)
	543	ENDDO
	544	ENDDO
	545	ENDDO
	546	resorted = .TRUE.
	547	ENDIF
	548	ELSE
[3004]	549	IF ( .NOT. ALLOCATED( pt_av ) ) THEN
	550	ALLOCATE( pt_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
	551	pt_av = REAL( fill_value, KIND = wp )
	552	ENDIF
[1]	553	to_be_resorted => pt_av
	554	ENDIF
	555
	556	CASE ( 'q' )
	557	IF ( av == 0 ) THEN
	558	to_be_resorted => q
	559	ELSE
[3004]	560	IF ( .NOT. ALLOCATED( q_av ) ) THEN
	561	ALLOCATE( q_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
	562	q_av = REAL( fill_value, KIND = wp )
	563	ENDIF
[1]	564	to_be_resorted => q_av
	565	ENDIF
[691]	566
[1053]	567	CASE ( 'qc' )
[1]	568	IF ( av == 0 ) THEN
[1115]	569	to_be_resorted => qc
[1]	570	ELSE
[3004]	571	IF ( .NOT. ALLOCATED( qc_av ) ) THEN
	572	ALLOCATE( qc_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
	573	qc_av = REAL( fill_value, KIND = wp )
	574	ENDIF
[1115]	575	to_be_resorted => qc_av
[1]	576	ENDIF
	577
[1053]	578	CASE ( 'ql' )
	579	IF ( av == 0 ) THEN
[1115]	580	to_be_resorted => ql
[1053]	581	ELSE
[3004]	582	IF ( .NOT. ALLOCATED( ql_av ) ) THEN
	583	ALLOCATE( ql_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
	584	ql_av = REAL( fill_value, KIND = wp )
	585	ENDIF
[1115]	586	to_be_resorted => ql_av
[1053]	587	ENDIF
	588
[1]	589	CASE ( 'ql_c' )
	590	IF ( av == 0 ) THEN
	591	to_be_resorted => ql_c
	592	ELSE
[3004]	593	IF ( .NOT. ALLOCATED( ql_c_av ) ) THEN
	594	ALLOCATE( ql_c_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
	595	ql_c_av = REAL( fill_value, KIND = wp )
	596	ENDIF
[1]	597	to_be_resorted => ql_c_av
	598	ENDIF
	599
	600	CASE ( 'ql_v' )
	601	IF ( av == 0 ) THEN
	602	to_be_resorted => ql_v
	603	ELSE
[3004]	604	IF ( .NOT. ALLOCATED( ql_v_av ) ) THEN
	605	ALLOCATE( ql_v_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
	606	ql_v_av = REAL( fill_value, KIND = wp )
	607	ENDIF
[1]	608	to_be_resorted => ql_v_av
	609	ENDIF
	610
	611	CASE ( 'ql_vp' )
	612	IF ( av == 0 ) THEN
[1359]	613	IF ( simulated_time >= particle_advection_start ) THEN
	614	DO i = nxl, nxr
	615	DO j = nys, nyn
[1551]	616	DO k = nzb_do, nzt_do
[1359]	617	number_of_particles = prt_count(k,j,i)
	618	IF (number_of_particles <= 0) CYCLE
	619	particles => grid_particles(k,j,i)%particles(1:number_of_particles)
	620	DO n = 1, number_of_particles
	621	IF ( particles(n)%particle_mask ) THEN
	622	tend(k,j,i) = tend(k,j,i) + &
	623	particles(n)%weight_factor / &
	624	prt_count(k,j,i)
	625	ENDIF
	626	ENDDO
[1007]	627	ENDDO
	628	ENDDO
	629	ENDDO
[1359]	630	ELSE
	631	tend = 0.0_wp
	632	ENDIF
[2512]	633	DO i = nxl, nxr
	634	DO j = nys, nyn
[1551]	635	DO k = nzb_do, nzt_do
[1007]	636	local_pf(i,j,k) = tend(k,j,i)
	637	ENDDO
	638	ENDDO
	639	ENDDO
	640	resorted = .TRUE.
[1]	641	ELSE
[3004]	642	IF ( .NOT. ALLOCATED( ql_vp_av ) ) THEN
	643	ALLOCATE( ql_vp_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
	644	ql_vp_av = REAL( fill_value, KIND = wp )
	645	ENDIF
[1]	646	to_be_resorted => ql_vp_av
	647	ENDIF
	648
[1053]	649	CASE ( 'qr' )
	650	IF ( av == 0 ) THEN
	651	to_be_resorted => qr
	652	ELSE
[3004]	653	IF ( .NOT. ALLOCATED( qr_av ) ) THEN
	654	ALLOCATE( qr_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
	655	qr_av = REAL( fill_value, KIND = wp )
	656	ENDIF
[1053]	657	to_be_resorted => qr_av
	658	ENDIF
	659
[1]	660	CASE ( 'qv' )
	661	IF ( av == 0 ) THEN
[2512]	662	DO i = nxl, nxr
	663	DO j = nys, nyn
[1551]	664	DO k = nzb_do, nzt_do
[1]	665	local_pf(i,j,k) = q(k,j,i) - ql(k,j,i)
	666	ENDDO
	667	ENDDO
	668	ENDDO
	669	resorted = .TRUE.
	670	ELSE
[3004]	671	IF ( .NOT. ALLOCATED( qv_av ) ) THEN
	672	ALLOCATE( qv_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
	673	qv_av = REAL( fill_value, KIND = wp )
	674	ENDIF
[1]	675	to_be_resorted => qv_av
	676	ENDIF
	677
[2031]	678	CASE ( 'rho_ocean' )
[96]	679	IF ( av == 0 ) THEN
[2031]	680	to_be_resorted => rho_ocean
[96]	681	ELSE
[3004]	682	IF ( .NOT. ALLOCATED( rho_ocean_av ) ) THEN
	683	ALLOCATE( u_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
	684	u_av = REAL( fill_value, KIND = wp )
	685	ENDIF
[2031]	686	to_be_resorted => rho_ocean_av
[96]	687	ENDIF
[691]	688
[1]	689	CASE ( 's' )
	690	IF ( av == 0 ) THEN
[1960]	691	to_be_resorted => s
[1]	692	ELSE
[3004]	693	IF ( .NOT. ALLOCATED( s_av ) ) THEN
	694	ALLOCATE( s_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
	695	s_av = REAL( fill_value, KIND = wp )
	696	ENDIF
[355]	697	to_be_resorted => s_av
[1]	698	ENDIF
[691]	699
[96]	700	CASE ( 'sa' )
	701	IF ( av == 0 ) THEN
	702	to_be_resorted => sa
	703	ELSE
[3004]	704	IF ( .NOT. ALLOCATED( sa_av ) ) THEN
	705	ALLOCATE( sa_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
	706	sa_av = REAL( fill_value, KIND = wp )
	707	ENDIF
[96]	708	to_be_resorted => sa_av
	709	ENDIF
[691]	710
[1]	711	CASE ( 'u' )
[2696]	712	flag_nr = 1
[1]	713	IF ( av == 0 ) THEN
	714	to_be_resorted => u
	715	ELSE
[3004]	716	IF ( .NOT. ALLOCATED( u_av ) ) THEN
	717	ALLOCATE( u_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
	718	u_av = REAL( fill_value, KIND = wp )
	719	ENDIF
[1]	720	to_be_resorted => u_av
	721	ENDIF
	722
	723	CASE ( 'v' )
[2696]	724	flag_nr = 2
[1]	725	IF ( av == 0 ) THEN
	726	to_be_resorted => v
	727	ELSE
[3004]	728	IF ( .NOT. ALLOCATED( v_av ) ) THEN
	729	ALLOCATE( v_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
	730	v_av = REAL( fill_value, KIND = wp )
	731	ENDIF
[1]	732	to_be_resorted => v_av
	733	ENDIF
	734
	735	CASE ( 'vpt' )
	736	IF ( av == 0 ) THEN
	737	to_be_resorted => vpt
	738	ELSE
[3004]	739	IF ( .NOT. ALLOCATED( vpt_av ) ) THEN
	740	ALLOCATE( vpt_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
	741	vpt_av = REAL( fill_value, KIND = wp )
	742	ENDIF
[1]	743	to_be_resorted => vpt_av
	744	ENDIF
	745
	746	CASE ( 'w' )
[2696]	747	flag_nr = 3
[1]	748	IF ( av == 0 ) THEN
	749	to_be_resorted => w
	750	ELSE
[3004]	751	IF ( .NOT. ALLOCATED( w_av ) ) THEN
	752	ALLOCATE( w_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
	753	w_av = REAL( fill_value, KIND = wp )
	754	ENDIF
[1]	755	to_be_resorted => w_av
	756	ENDIF
[2007]	757	!
	758	!-- Block of urban surface model outputs
	759	CASE ( 'usm_output' )
	760	CALL usm_data_output_3d( av, do3d(av,if), found, local_pf, &
	761	nzb_do, nzt_do )
[1]	762
	763	CASE DEFAULT
[1972]	764
[1]	765	!
[1972]	766	!-- Land surface quantity
	767	IF ( land_surface ) THEN
	768	!
	769	!-- For soil model quantities, it is required to re-allocate local_pf
	770	nzb_do = nzb_soil
	771	nzt_do = nzt_soil
	772
	773	DEALLOCATE ( local_pf )
[2512]	774	ALLOCATE( local_pf(nxl:nxr,nys:nyn,nzb_do:nzt_do) )
[2696]	775	local_pf = fill_value
[1972]	776
	777	CALL lsm_data_output_3d( av, do3d(av,if), found, local_pf )
	778	resorted = .TRUE.
[1976]	779
	780	!
	781	!-- If no soil model variable was found, re-allocate local_pf
	782	IF ( .NOT. found ) THEN
	783	nzb_do = nzb
	784	nzt_do = nz_do3d
	785
	786	DEALLOCATE ( local_pf )
[2512]	787	ALLOCATE( local_pf(nxl:nxr,nys:nyn,nzb_do:nzt_do) )
[1976]	788	ENDIF
	789
[1972]	790	ENDIF
	791
[2696]	792	IF ( .NOT. found ) THEN
[3014]	793	CALL tcm_data_output_3d( av, do3d(av,if), found, local_pf, &
	794	nzb_do, nzt_do )
[2696]	795	resorted = .TRUE.
	796	ENDIF
	797
[1972]	798	!
[1976]	799	!-- Radiation quantity
	800	IF ( .NOT. found .AND. radiation ) THEN
	801	CALL radiation_data_output_3d( av, do3d(av,if), found, &
[3014]	802	local_pf, nzb_do, nzt_do )
[1976]	803	resorted = .TRUE.
	804	ENDIF
	805
	806	!
[2817]	807	!-- Gust module quantities
	808	IF ( .NOT. found .AND. gust_module_enabled ) THEN
	809	CALL gust_data_output_3d( av, do3d(av,if), found, local_pf, &
	810	nzb_do, nzt_do )
	811	resorted = .TRUE.
	812	ENDIF
	813
	814	!
[2696]	815	!-- Chemistry model output
	816	IF ( .NOT. found .AND. air_chemistry ) THEN
	817	CALL chem_data_output_3d( av, do3d(av,if), found, &
[3014]	818	local_pf, fill_value, nzb_do, nzt_do )
[2696]	819	resorted = .TRUE.
	820	ENDIF
	821
	822	!
[2209]	823	!-- Plant canopy model output
	824	IF ( .NOT. found .AND. plant_canopy ) THEN
[2696]	825	CALL pcm_data_output_3d( av, do3d(av,if), found, local_pf, &
[3014]	826	fill_value, nzb_do, nzt_do )
[2209]	827	resorted = .TRUE.
	828	ENDIF
	829
	830	!
[1]	831	!-- User defined quantity
[1972]	832	IF ( .NOT. found ) THEN
	833	CALL user_data_output_3d( av, do3d(av,if), found, local_pf, &
	834	nzb_do, nzt_do )
	835	resorted = .TRUE.
	836	ENDIF
[1]	837
[254]	838	IF ( .NOT. found ) THEN
[1320]	839	message_string = 'no output available for: ' // &
[274]	840	TRIM( do3d(av,if) )
[254]	841	CALL message( 'data_output_3d', 'PA0182', 0, 0, 0, 6, 0 )
[1]	842	ENDIF
	843
	844	END SELECT
	845
	846	!
	847	!-- Resort the array to be output, if not done above
	848	IF ( .NOT. resorted ) THEN
[2512]	849	DO i = nxl, nxr
	850	DO j = nys, nyn
[1551]	851	DO k = nzb_do, nzt_do
[2696]	852	local_pf(i,j,k) = MERGE( &
	853	to_be_resorted(k,j,i), &
	854	REAL( fill_value, KIND = wp ), &
	855	BTEST( wall_flags_0(k,j,i), flag_nr ) )
[1]	856	ENDDO
	857	ENDDO
	858	ENDDO
	859	ENDIF
	860
	861	!
[1327]	862	!-- Output of the 3D-array
	863	#if defined( __parallel )
	864	IF ( netcdf_data_format < 5 ) THEN
[1]	865	!
[1327]	866	!-- Non-parallel netCDF output. Data is output in parallel in
	867	!-- FORTRAN binary format here, and later collected into one file by
	868	!-- combine_plot_fields
	869	IF ( myid == 0 ) THEN
	870	WRITE ( 30 ) time_since_reference_point, &
	871	do3d_time_count(av), av
[1]	872	ENDIF
[1327]	873	DO i = 0, io_blocks-1
	874	IF ( i == io_group ) THEN
[2512]	875	WRITE ( 30 ) nxl, nxr, nys, nyn, nzb_do, nzt_do
[1551]	876	WRITE ( 30 ) local_pf(:,:,nzb_do:nzt_do)
[1327]	877	ENDIF
[1972]	878
[1327]	879	CALL MPI_BARRIER( comm2d, ierr )
[1972]	880
[1327]	881	ENDDO
[559]	882
[1327]	883	ELSE
[646]	884	#if defined( __netcdf )
[493]	885	!
[1327]	886	!-- Parallel output in netCDF4/HDF5 format.
[2512]	887	! IF ( nxr == nx .AND. nyn /= ny ) THEN
	888	! nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,if), &
	889	! local_pf(nxl:nxr+1,nys:nyn,nzb_do:nzt_do), &
	890	! start = (/ nxl+1, nys+1, nzb_do+1, do3d_time_count(av) /), &
	891	! count = (/ nxr-nxl+2, nyn-nys+1, nzt_do-nzb_do+1, 1 /) )
	892	! ELSEIF ( nxr /= nx .AND. nyn == ny ) THEN
	893	! nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,if), &
	894	! local_pf(nxl:nxr,nys:nyn+1,nzb_do:nzt_do), &
	895	! start = (/ nxl+1, nys+1, nzb_do+1, do3d_time_count(av) /), &
	896	! count = (/ nxr-nxl+1, nyn-nys+2, nzt_do-nzb_do+1, 1 /) )
	897	! ELSEIF ( nxr == nx .AND. nyn == ny ) THEN
	898	! nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,if), &
	899	! local_pf(nxl:nxr+1,nys:nyn+1,nzb_do:nzt_do ), &
	900	! start = (/ nxl+1, nys+1, nzb_do+1, do3d_time_count(av) /), &
	901	! count = (/ nxr-nxl+2, nyn-nys+2, nzt_do-nzb_do+1, 1 /) )
	902	! ELSE
[1327]	903	nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,if), &
[1551]	904	local_pf(nxl:nxr,nys:nyn,nzb_do:nzt_do), &
	905	start = (/ nxl+1, nys+1, nzb_do+1, do3d_time_count(av) /), &
	906	count = (/ nxr-nxl+1, nyn-nys+1, nzt_do-nzb_do+1, 1 /) )
[2512]	907	! ENDIF
[1783]	908	CALL netcdf_handle_error( 'data_output_3d', 386 )
[646]	909	#endif
[1327]	910	ENDIF
[1]	911	#else
	912	#if defined( __netcdf )
[1327]	913	nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,if), &
[1551]	914	local_pf(nxl:nxr+1,nys:nyn+1,nzb_do:nzt_do), &
[1327]	915	start = (/ 1, 1, 1, do3d_time_count(av) /), &
[2512]	916	count = (/ nx+1, ny+1, nzt_do-nzb_do+1, 1 /) )
[1783]	917	CALL netcdf_handle_error( 'data_output_3d', 446 )
[1]	918	#endif
	919	#endif
	920
	921	if = if + 1
	922
	923	!
[1551]	924	!-- Deallocate temporary array
	925	DEALLOCATE ( local_pf )
[1]	926
[1551]	927	ENDDO
[1]	928
[1318]	929	CALL cpu_log( log_point(14), 'data_output_3d', 'stop' )
[1]	930
	931	END SUBROUTINE data_output_3d

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