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source: palm/trunk/SOURCE/data_output_3d.f90 @ 2912

Last change on this file since 2912 was 2817, checked in by knoop, 7 years ago
Preliminary gust module interface implemented
Property svn:keywords set to `Id`
File size: 27.7 KB

Rev	Line
[1682]	1	!> @file data_output_3d.f90
[2000]	2	!------------------------------------------------------------------------------!
[2696]	3	! This file is part of the PALM model system.
[1036]	4	!
[2000]	5	! PALM is free software: you can redistribute it and/or modify it under the
	6	! terms of the GNU General Public License as published by the Free Software
	7	! Foundation, either version 3 of the License, or (at your option) any later
	8	! version.
[1036]	9	!
	10	! PALM is distributed in the hope that it will be useful, but WITHOUT ANY
	11	! WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR
	12	! A PARTICULAR PURPOSE. See the GNU General Public License for more details.
	13	!
	14	! You should have received a copy of the GNU General Public License along with
	15	! PALM. If not, see <http://www.gnu.org/licenses/>.
	16	!
[2718]	17	! Copyright 1997-2018 Leibniz Universitaet Hannover
[2000]	18	!------------------------------------------------------------------------------!
[1036]	19	!
[254]	20	! Current revisions:
[1106]	21	! ------------------
[1961]	22	!
[2233]	23	!
[1552]	24	! Former revisions:
	25	! -----------------
	26	! $Id: data_output_3d.f90 2817 2018-02-19 16:32:21Z knoop $
[2817]	27	! Preliminary gust module interface implemented
	28	!
	29	! 2766 2018-01-22 17:17:47Z kanani
[2766]	30	! Removed preprocessor directive __chem
	31	!
	32	! 2756 2018-01-16 18:11:14Z suehring
[2756]	33	! Fill values for 3D output of chemical species introduced.
	34	!
	35	! 2746 2018-01-15 12:06:04Z suehring
[2746]	36	! Move flag plant canopy to modules
	37	!
	38	! 2718 2018-01-02 08:49:38Z maronga
[2716]	39	! Corrected "Former revisions" section
	40	!
	41	! 2696 2017-12-14 17:12:51Z kanani
	42	! Change in file header (GPL part)
[2696]	43	! Implementation of turbulence_closure_mod (TG)
	44	! Implementation of chemistry module (FK)
	45	! Set fill values at topography grid points or e.g. non-natural-type surface
	46	! in case of LSM output (MS)
	47	!
	48	! 2512 2017-10-04 08:26:59Z raasch
[2512]	49	! upper bounds of 3d output changed from nx+1,ny+1 to nx,ny
	50	! no output of ghost layer data
	51	!
	52	! 2292 2017-06-20 09:51:42Z schwenkel
[2292]	53	! Implementation of new microphysic scheme: cloud_scheme = 'morrison'
	54	! includes two more prognostic equations for cloud drop concentration (nc)
	55	! and cloud water content (qc).
	56	!
	57	! 2233 2017-05-30 18:08:54Z suehring
[1552]	58	!
[2233]	59	! 2232 2017-05-30 17:47:52Z suehring
	60	! Adjustments to new topography concept
	61	!
[2210]	62	! 2209 2017-04-19 09:34:46Z kanani
	63	! Added plant canopy model output
	64	!
[2032]	65	! 2031 2016-10-21 15:11:58Z knoop
	66	! renamed variable rho to rho_ocean and rho_av to rho_ocean_av
	67	!
[2012]	68	! 2011 2016-09-19 17:29:57Z kanani
	69	! Flag urban_surface is now defined in module control_parameters,
	70	! changed prefix for urban surface model output to "usm_",
	71	! introduced control parameter varnamelength for LEN of trimvar.
	72	!
[2008]	73	! 2007 2016-08-24 15:47:17Z kanani
	74	! Added support for new urban surface model (temporary modifications of
	75	! SELECT CASE ( ) necessary, see variable trimvar)
	76	!
[2001]	77	! 2000 2016-08-20 18:09:15Z knoop
	78	! Forced header and separation lines into 80 columns
	79	!
[1981]	80	! 1980 2016-07-29 15:51:57Z suehring
	81	! Bugfix, in order to steer user-defined output, setting flag found explicitly
	82	! to .F.
	83	!
[1977]	84	! 1976 2016-07-27 13:28:04Z maronga
	85	! Output of radiation quantities is now done directly in the respective module
	86	!
[1973]	87	! 1972 2016-07-26 07:52:02Z maronga
	88	! Output of land surface quantities is now done directly in the respective module.
	89	! Unnecessary directive __parallel removed.
	90	!
[1961]	91	! 1960 2016-07-12 16:34:24Z suehring
	92	! Scalar surface flux added
	93	!
[1851]	94	! 1849 2016-04-08 11:33:18Z hoffmann
	95	! prr moved to arrays_3d
	96	!
[1823]	97	! 1822 2016-04-07 07:49:42Z hoffmann
	98	! prr vertical dimensions set to nzb_do to nzt_do. Unused variables deleted.
	99	!
[1809]	100	! 1808 2016-04-05 19:44:00Z raasch
	101	! test output removed
	102	!
[1784]	103	! 1783 2016-03-06 18:36:17Z raasch
	104	! name change of netcdf routines and module + related changes
	105	!
[1746]	106	! 1745 2016-02-05 13:06:51Z gronemeier
	107	! Bugfix: test if time axis limit exceeds moved to point after call of check_open
	108	!
[1692]	109	! 1691 2015-10-26 16:17:44Z maronga
	110	! Added output of radiative heating rates for RRTMG
	111	!
[1683]	112	! 1682 2015-10-07 23:56:08Z knoop
	113	! Code annotations made doxygen readable
	114	!
[1586]	115	! 1585 2015-04-30 07:05:52Z maronga
	116	! Added support for RRTMG
	117	!
[1552]	118	! 1551 2015-03-03 14:18:16Z maronga
[1551]	119	! Added suppport for land surface model and radiation model output. In the course
	120	! of this action, the limits for vertical loops have been changed (from nzb and
	121	! nzt+1 to nzb_do and nzt_do, respectively in order to allow soil model output).
	122	! Moreover, a new vertical grid zs was introduced.
[1329]	123	!
[1360]	124	! 1359 2014-04-11 17:15:14Z hoffmann
	125	! New particle structure integrated.
	126	!
[1354]	127	! 1353 2014-04-08 15:21:23Z heinze
	128	! REAL constants provided with KIND-attribute
	129	!
[1329]	130	! 1327 2014-03-21 11:00:16Z raasch
	131	! parts concerning avs output removed,
	132	! -netcdf output queries
	133	!
[1321]	134	! 1320 2014-03-20 08:40:49Z raasch
[1320]	135	! ONLY-attribute added to USE-statements,
	136	! kind-parameters added to all INTEGER and REAL declaration statements,
	137	! kinds are defined in new module kinds,
	138	! old module precision_kind is removed,
	139	! revision history before 2012 removed,
	140	! comment fields (!:) to be used for variable explanations added to
	141	! all variable declaration statements
[674]	142	!
[1319]	143	! 1318 2014-03-17 13:35:16Z raasch
	144	! barrier argument removed from cpu_log,
	145	! module interfaces removed
	146	!
[1309]	147	! 1308 2014-03-13 14:58:42Z fricke
	148	! Check, if the limit of the time dimension is exceeded for parallel output
	149	! To increase the performance for parallel output, the following is done:
	150	! - Update of time axis is only done by PE0
	151	!
[1245]	152	! 1244 2013-10-31 08:16:56Z raasch
	153	! Bugfix for index bounds in case of 3d-parallel output
	154	!
[1116]	155	! 1115 2013-03-26 18:16:16Z hoffmann
	156	! ql is calculated by calc_liquid_water_content
	157	!
[1107]	158	! 1106 2013-03-04 05:31:38Z raasch
	159	! array_kind renamed precision_kind
	160	!
[1077]	161	! 1076 2012-12-05 08:30:18Z hoffmann
	162	! Bugfix in output of ql
	163	!
[1054]	164	! 1053 2012-11-13 17:11:03Z hoffmann
	165	! +nr, qr, prr, qc and averaged quantities
	166	!
[1037]	167	! 1036 2012-10-22 13:43:42Z raasch
	168	! code put under GPL (PALM 3.9)
	169	!
[1035]	170	! 1031 2012-10-19 14:35:30Z raasch
	171	! netCDF4 without parallel file support implemented
	172	!
[1008]	173	! 1007 2012-09-19 14:30:36Z franke
	174	! Bugfix: missing calculation of ql_vp added
	175	!
[1]	176	! Revision 1.1 1997/09/03 06:29:36 raasch
	177	! Initial revision
	178	!
	179	!
	180	! Description:
	181	! ------------
[1682]	182	!> Output of the 3D-arrays in netCDF and/or AVS format.
[1]	183	!------------------------------------------------------------------------------!
[1682]	184	SUBROUTINE data_output_3d( av )
	185
[1]	186
[1320]	187	USE arrays_3d, &
[2292]	188	ONLY: e, nc, nr, p, pt, prr, q, qc, ql, ql_c, ql_v, qr, rho_ocean, s, &
	189	sa, tend, u, v, vpt, w
[1320]	190
[1]	191	USE averaging
[1320]	192
[2696]	193	USE chemistry_model_mod, &
	194	ONLY: chem_data_output_3d
	195
[1320]	196	USE cloud_parameters, &
[1849]	197	ONLY: l_d_cp, pt_d_t
[1320]	198
	199	USE control_parameters, &
[2696]	200	ONLY: air_chemistry, cloud_physics, do3d, do3d_no, do3d_time_count, &
	201	io_blocks, io_group, land_surface, message_string, &
[2746]	202	ntdim_3d, nz_do3d, plant_canopy, &
[2232]	203	psolver, simulated_time, time_since_reference_point, &
	204	urban_surface, varnamelength
[1320]	205
	206	USE cpulog, &
	207	ONLY: log_point, cpu_log
[2817]	208
	209	USE gust_mod, &
	210	ONLY: gust_data_output_3d, gust_module_enabled
[1320]	211
	212	USE indices, &
[2696]	213	ONLY: nbgp, nx, nxl, nxr, ny, nyn, nys, nzb, wall_flags_0
[1320]	214
	215	USE kinds
	216
[1551]	217	USE land_surface_model_mod, &
[2232]	218	ONLY: lsm_data_output_3d, nzb_soil, nzt_soil
[1551]	219
[1783]	220	#if defined( __netcdf )
	221	USE NETCDF
	222	#endif
	223
	224	USE netcdf_interface, &
[2696]	225	ONLY: fill_value, id_set_3d, id_var_do3d, id_var_time_3d, nc_stat, &
[1783]	226	netcdf_data_format, netcdf_handle_error
[1320]	227
	228	USE particle_attributes, &
[1359]	229	ONLY: grid_particles, number_of_particles, particles, &
	230	particle_advection_start, prt_count
[1320]	231
[1]	232	USE pegrid
	233
[2209]	234	USE plant_canopy_model_mod, &
[2746]	235	ONLY: pcm_data_output_3d
[2209]	236
[1585]	237	USE radiation_model_mod, &
[2696]	238	ONLY: nzub, nzut, radiation, radiation_data_output_3d
[1585]	239
[2696]	240	USE turbulence_closure_mod, &
	241	ONLY: tcm_data_output_3d
	242
[2007]	243	USE urban_surface_mod, &
[2696]	244	ONLY: usm_data_output_3d
[1585]	245
[2007]	246
[1]	247	IMPLICIT NONE
	248
[1682]	249	INTEGER(iwp) :: av !<
[2696]	250	INTEGER(iwp) :: flag_nr !< number of masking flag
[1682]	251	INTEGER(iwp) :: i !<
	252	INTEGER(iwp) :: if !<
	253	INTEGER(iwp) :: j !<
	254	INTEGER(iwp) :: k !<
	255	INTEGER(iwp) :: n !<
	256	INTEGER(iwp) :: nzb_do !< vertical lower limit for data output
	257	INTEGER(iwp) :: nzt_do !< vertical upper limit for data output
[1]	258
[1682]	259	LOGICAL :: found !<
	260	LOGICAL :: resorted !<
[1]	261
[1682]	262	REAL(wp) :: mean_r !<
	263	REAL(wp) :: s_r2 !<
	264	REAL(wp) :: s_r3 !<
[1]	265
[1682]	266	REAL(sp), DIMENSION(:,:,:), ALLOCATABLE :: local_pf !<
[1]	267
[1682]	268	REAL(wp), DIMENSION(:,:,:), POINTER :: to_be_resorted !<
[1]	269
[2011]	270	CHARACTER (LEN=varnamelength) :: trimvar !< TRIM of output-variable string
[2007]	271
[1]	272	!
	273	!-- Return, if nothing to output
	274	IF ( do3d_no(av) == 0 ) RETURN
	275
	276	CALL cpu_log (log_point(14),'data_output_3d','start')
	277
	278	!
	279	!-- Open output file.
[2512]	280	!-- For classic or 64bit netCDF output on more than one PE, each PE opens its
	281	!-- own file and writes the data of its subdomain in binary format. After the
	282	!-- run, these files are combined to one NetCDF file by combine_plot_fields.
[1031]	283	!-- For netCDF4/HDF5 output, data is written in parallel into one file.
[1327]	284	IF ( netcdf_data_format < 5 ) THEN
	285	CALL check_open( 30 )
	286	IF ( myid == 0 ) CALL check_open( 106+av*10 )
[493]	287	ELSE
[1327]	288	CALL check_open( 106+av*10 )
[493]	289	ENDIF
[1]	290
	291	!
[1745]	292	!-- For parallel netcdf output the time axis must be limited. Return, if this
	293	!-- limit is exceeded. This could be the case, if the simulated time exceeds
	294	!-- the given end time by the length of the given output interval.
	295	IF ( netcdf_data_format > 4 ) THEN
	296	IF ( do3d_time_count(av) + 1 > ntdim_3d(av) ) THEN
	297	WRITE ( message_string, * ) 'Output of 3d data is not given at t=', &
	298	simulated_time, '&because the maximum ', &
	299	'number of output time levels is ', &
	300	'exceeded.'
	301	CALL message( 'data_output_3d', 'PA0387', 0, 1, 0, 6, 0 )
	302	CALL cpu_log( log_point(14), 'data_output_3d', 'stop' )
	303	RETURN
	304	ENDIF
	305	ENDIF
	306
	307	!
[1031]	308	!-- Update the netCDF time axis
[1308]	309	!-- In case of parallel output, this is only done by PE0 to increase the
	310	!-- performance.
[1]	311	#if defined( __netcdf )
[1308]	312	do3d_time_count(av) = do3d_time_count(av) + 1
	313	IF ( myid == 0 ) THEN
[1327]	314	nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_time_3d(av), &
	315	(/ time_since_reference_point /), &
	316	start = (/ do3d_time_count(av) /), &
	317	count = (/ 1 /) )
[1783]	318	CALL netcdf_handle_error( 'data_output_3d', 376 )
[1]	319	ENDIF
	320	#endif
	321
	322	!
	323	!-- Loop over all variables to be written.
	324	if = 1
	325
	326	DO WHILE ( do3d(av,if)(1:1) /= ' ' )
[2007]	327
[1]	328	!
[2007]	329	!-- Temporary solution to account for data output within the new urban
	330	!-- surface model (urban_surface_mod.f90), see also SELECT CASE ( trimvar ).
[1]	331	!-- Store the array chosen on the temporary array.
[2007]	332	trimvar = TRIM( do3d(av,if) )
[2011]	333	IF ( urban_surface .AND. trimvar(1:4) == 'usm_' ) THEN
[2007]	334	trimvar = 'usm_output'
	335	resorted = .TRUE.
	336	nzb_do = nzub
	337	nzt_do = nzut
	338	ELSE
	339	resorted = .FALSE.
	340	nzb_do = nzb
	341	nzt_do = nz_do3d
	342	ENDIF
[1551]	343	!
[1980]	344	!-- Set flag to steer output of radiation, land-surface, or user-defined
	345	!-- quantities
	346	found = .FALSE.
	347	!
[1551]	348	!-- Allocate a temporary array with the desired output dimensions.
[2512]	349	ALLOCATE( local_pf(nxl:nxr,nys:nyn,nzb_do:nzt_do) )
[2696]	350	!
	351	!-- Before each output, set array local_pf to fill value
	352	local_pf = fill_value
	353	!
	354	!-- Set masking flag for topography for not resorted arrays
	355	flag_nr = 0
[1551]	356
[2007]	357	SELECT CASE ( trimvar )
[1]	358
	359	CASE ( 'e' )
	360	IF ( av == 0 ) THEN
	361	to_be_resorted => e
	362	ELSE
	363	to_be_resorted => e_av
	364	ENDIF
	365
[771]	366	CASE ( 'lpt' )
	367	IF ( av == 0 ) THEN
	368	to_be_resorted => pt
	369	ELSE
	370	to_be_resorted => lpt_av
	371	ENDIF
	372
[2292]	373	CASE ( 'nc' )
	374	IF ( av == 0 ) THEN
	375	to_be_resorted => nc
	376	ELSE
	377	to_be_resorted => nc_av
	378	ENDIF
	379
[1053]	380	CASE ( 'nr' )
	381	IF ( av == 0 ) THEN
	382	to_be_resorted => nr
	383	ELSE
	384	to_be_resorted => nr_av
	385	ENDIF
	386
[1]	387	CASE ( 'p' )
	388	IF ( av == 0 ) THEN
[727]	389	IF ( psolver /= 'sor' ) CALL exchange_horiz( p, nbgp )
[1]	390	to_be_resorted => p
	391	ELSE
[727]	392	IF ( psolver /= 'sor' ) CALL exchange_horiz( p_av, nbgp )
[1]	393	to_be_resorted => p_av
	394	ENDIF
	395
	396	CASE ( 'pc' ) ! particle concentration (requires ghostpoint exchange)
	397	IF ( av == 0 ) THEN
[1359]	398	IF ( simulated_time >= particle_advection_start ) THEN
	399	tend = prt_count
	400	ELSE
	401	tend = 0.0_wp
	402	ENDIF
[2512]	403	DO i = nxl, nxr
	404	DO j = nys, nyn
[1551]	405	DO k = nzb_do, nzt_do
[1]	406	local_pf(i,j,k) = tend(k,j,i)
	407	ENDDO
	408	ENDDO
	409	ENDDO
	410	resorted = .TRUE.
	411	ELSE
	412	to_be_resorted => pc_av
	413	ENDIF
	414
[1359]	415	CASE ( 'pr' ) ! mean particle radius (effective radius)
[1]	416	IF ( av == 0 ) THEN
[1359]	417	IF ( simulated_time >= particle_advection_start ) THEN
	418	DO i = nxl, nxr
	419	DO j = nys, nyn
[1551]	420	DO k = nzb_do, nzt_do
[1359]	421	number_of_particles = prt_count(k,j,i)
	422	IF (number_of_particles <= 0) CYCLE
	423	particles => grid_particles(k,j,i)%particles(1:number_of_particles)
	424	s_r2 = 0.0_wp
	425	s_r3 = 0.0_wp
	426	DO n = 1, number_of_particles
	427	IF ( particles(n)%particle_mask ) THEN
	428	s_r2 = s_r2 + particles(n)%radius*2 &
	429	particles(n)%weight_factor
	430	s_r3 = s_r3 + particles(n)%radius*3 &
	431	particles(n)%weight_factor
	432	ENDIF
	433	ENDDO
	434	IF ( s_r2 > 0.0_wp ) THEN
	435	mean_r = s_r3 / s_r2
	436	ELSE
	437	mean_r = 0.0_wp
	438	ENDIF
	439	tend(k,j,i) = mean_r
[1]	440	ENDDO
	441	ENDDO
	442	ENDDO
[1359]	443	ELSE
	444	tend = 0.0_wp
	445	ENDIF
[2512]	446	DO i = nxl, nxr
	447	DO j = nys, nyn
[1551]	448	DO k = nzb_do, nzt_do
[1]	449	local_pf(i,j,k) = tend(k,j,i)
	450	ENDDO
	451	ENDDO
	452	ENDDO
	453	resorted = .TRUE.
	454	ELSE
	455	to_be_resorted => pr_av
	456	ENDIF
	457
[1053]	458	CASE ( 'prr' )
	459	IF ( av == 0 ) THEN
[2512]	460	DO i = nxl, nxr
	461	DO j = nys, nyn
[1822]	462	DO k = nzb_do, nzt_do
[1053]	463	local_pf(i,j,k) = prr(k,j,i)
	464	ENDDO
	465	ENDDO
	466	ENDDO
	467	ELSE
[2512]	468	DO i = nxl, nxr
	469	DO j = nys, nyn
[1822]	470	DO k = nzb_do, nzt_do
[1053]	471	local_pf(i,j,k) = prr_av(k,j,i)
	472	ENDDO
	473	ENDDO
	474	ENDDO
	475	ENDIF
	476	resorted = .TRUE.
	477
[1]	478	CASE ( 'pt' )
	479	IF ( av == 0 ) THEN
	480	IF ( .NOT. cloud_physics ) THEN
	481	to_be_resorted => pt
	482	ELSE
[2512]	483	DO i = nxl, nxr
	484	DO j = nys, nyn
[1551]	485	DO k = nzb_do, nzt_do
[1320]	486	local_pf(i,j,k) = pt(k,j,i) + l_d_cp * &
	487	pt_d_t(k) * &
[1]	488	ql(k,j,i)
	489	ENDDO
	490	ENDDO
	491	ENDDO
	492	resorted = .TRUE.
	493	ENDIF
	494	ELSE
	495	to_be_resorted => pt_av
	496	ENDIF
	497
	498	CASE ( 'q' )
	499	IF ( av == 0 ) THEN
	500	to_be_resorted => q
	501	ELSE
	502	to_be_resorted => q_av
	503	ENDIF
[691]	504
[1053]	505	CASE ( 'qc' )
[1]	506	IF ( av == 0 ) THEN
[1115]	507	to_be_resorted => qc
[1]	508	ELSE
[1115]	509	to_be_resorted => qc_av
[1]	510	ENDIF
	511
[1053]	512	CASE ( 'ql' )
	513	IF ( av == 0 ) THEN
[1115]	514	to_be_resorted => ql
[1053]	515	ELSE
[1115]	516	to_be_resorted => ql_av
[1053]	517	ENDIF
	518
[1]	519	CASE ( 'ql_c' )
	520	IF ( av == 0 ) THEN
	521	to_be_resorted => ql_c
	522	ELSE
	523	to_be_resorted => ql_c_av
	524	ENDIF
	525
	526	CASE ( 'ql_v' )
	527	IF ( av == 0 ) THEN
	528	to_be_resorted => ql_v
	529	ELSE
	530	to_be_resorted => ql_v_av
	531	ENDIF
	532
	533	CASE ( 'ql_vp' )
	534	IF ( av == 0 ) THEN
[1359]	535	IF ( simulated_time >= particle_advection_start ) THEN
	536	DO i = nxl, nxr
	537	DO j = nys, nyn
[1551]	538	DO k = nzb_do, nzt_do
[1359]	539	number_of_particles = prt_count(k,j,i)
	540	IF (number_of_particles <= 0) CYCLE
	541	particles => grid_particles(k,j,i)%particles(1:number_of_particles)
	542	DO n = 1, number_of_particles
	543	IF ( particles(n)%particle_mask ) THEN
	544	tend(k,j,i) = tend(k,j,i) + &
	545	particles(n)%weight_factor / &
	546	prt_count(k,j,i)
	547	ENDIF
	548	ENDDO
[1007]	549	ENDDO
	550	ENDDO
	551	ENDDO
[1359]	552	ELSE
	553	tend = 0.0_wp
	554	ENDIF
[2512]	555	DO i = nxl, nxr
	556	DO j = nys, nyn
[1551]	557	DO k = nzb_do, nzt_do
[1007]	558	local_pf(i,j,k) = tend(k,j,i)
	559	ENDDO
	560	ENDDO
	561	ENDDO
	562	resorted = .TRUE.
[1]	563	ELSE
	564	to_be_resorted => ql_vp_av
	565	ENDIF
	566
[1053]	567	CASE ( 'qr' )
	568	IF ( av == 0 ) THEN
	569	to_be_resorted => qr
	570	ELSE
	571	to_be_resorted => qr_av
	572	ENDIF
	573
[1]	574	CASE ( 'qv' )
	575	IF ( av == 0 ) THEN
[2512]	576	DO i = nxl, nxr
	577	DO j = nys, nyn
[1551]	578	DO k = nzb_do, nzt_do
[1]	579	local_pf(i,j,k) = q(k,j,i) - ql(k,j,i)
	580	ENDDO
	581	ENDDO
	582	ENDDO
	583	resorted = .TRUE.
	584	ELSE
	585	to_be_resorted => qv_av
	586	ENDIF
	587
[2031]	588	CASE ( 'rho_ocean' )
[96]	589	IF ( av == 0 ) THEN
[2031]	590	to_be_resorted => rho_ocean
[96]	591	ELSE
[2031]	592	to_be_resorted => rho_ocean_av
[96]	593	ENDIF
[691]	594
[1]	595	CASE ( 's' )
	596	IF ( av == 0 ) THEN
[1960]	597	to_be_resorted => s
[1]	598	ELSE
[355]	599	to_be_resorted => s_av
[1]	600	ENDIF
[691]	601
[96]	602	CASE ( 'sa' )
	603	IF ( av == 0 ) THEN
	604	to_be_resorted => sa
	605	ELSE
	606	to_be_resorted => sa_av
	607	ENDIF
[691]	608
[1]	609	CASE ( 'u' )
[2696]	610	flag_nr = 1
[1]	611	IF ( av == 0 ) THEN
	612	to_be_resorted => u
	613	ELSE
	614	to_be_resorted => u_av
	615	ENDIF
	616
	617	CASE ( 'v' )
[2696]	618	flag_nr = 2
[1]	619	IF ( av == 0 ) THEN
	620	to_be_resorted => v
	621	ELSE
	622	to_be_resorted => v_av
	623	ENDIF
	624
	625	CASE ( 'vpt' )
	626	IF ( av == 0 ) THEN
	627	to_be_resorted => vpt
	628	ELSE
	629	to_be_resorted => vpt_av
	630	ENDIF
	631
	632	CASE ( 'w' )
[2696]	633	flag_nr = 3
[1]	634	IF ( av == 0 ) THEN
	635	to_be_resorted => w
	636	ELSE
	637	to_be_resorted => w_av
	638	ENDIF
[2007]	639	!
	640	!-- Block of urban surface model outputs
	641	CASE ( 'usm_output' )
	642	CALL usm_data_output_3d( av, do3d(av,if), found, local_pf, &
	643	nzb_do, nzt_do )
[1]	644
	645	CASE DEFAULT
[1972]	646
[1]	647	!
[1972]	648	!-- Land surface quantity
	649	IF ( land_surface ) THEN
	650	!
	651	!-- For soil model quantities, it is required to re-allocate local_pf
	652	nzb_do = nzb_soil
	653	nzt_do = nzt_soil
	654
	655	DEALLOCATE ( local_pf )
[2512]	656	ALLOCATE( local_pf(nxl:nxr,nys:nyn,nzb_do:nzt_do) )
[2696]	657	local_pf = fill_value
[1972]	658
	659	CALL lsm_data_output_3d( av, do3d(av,if), found, local_pf )
	660	resorted = .TRUE.
[1976]	661
	662	!
	663	!-- If no soil model variable was found, re-allocate local_pf
	664	IF ( .NOT. found ) THEN
	665	nzb_do = nzb
	666	nzt_do = nz_do3d
	667
	668	DEALLOCATE ( local_pf )
[2512]	669	ALLOCATE( local_pf(nxl:nxr,nys:nyn,nzb_do:nzt_do) )
[1976]	670	ENDIF
	671
[1972]	672	ENDIF
	673
[2696]	674	IF ( .NOT. found ) THEN
	675	CALL tcm_data_output_3d( av, do3d(av,if), found, local_pf )
	676	resorted = .TRUE.
	677	ENDIF
	678
[1972]	679	!
[1976]	680	!-- Radiation quantity
	681	IF ( .NOT. found .AND. radiation ) THEN
	682	CALL radiation_data_output_3d( av, do3d(av,if), found, &
	683	local_pf )
	684	resorted = .TRUE.
	685	ENDIF
	686
	687	!
[2817]	688	!-- Gust module quantities
	689	IF ( .NOT. found .AND. gust_module_enabled ) THEN
	690	CALL gust_data_output_3d( av, do3d(av,if), found, local_pf, &
	691	nzb_do, nzt_do )
	692	resorted = .TRUE.
	693	ENDIF
	694
	695	!
[2696]	696	!-- Chemistry model output
	697	IF ( .NOT. found .AND. air_chemistry ) THEN
	698	CALL chem_data_output_3d( av, do3d(av,if), found, &
[2756]	699	local_pf, fill_value )
[2696]	700	resorted = .TRUE.
	701	ENDIF
	702
	703	!
[2209]	704	!-- Plant canopy model output
	705	IF ( .NOT. found .AND. plant_canopy ) THEN
[2696]	706	CALL pcm_data_output_3d( av, do3d(av,if), found, local_pf, &
	707	fill_value )
[2209]	708	resorted = .TRUE.
	709	ENDIF
	710
	711	!
[1]	712	!-- User defined quantity
[1972]	713	IF ( .NOT. found ) THEN
	714	CALL user_data_output_3d( av, do3d(av,if), found, local_pf, &
	715	nzb_do, nzt_do )
	716	resorted = .TRUE.
	717	ENDIF
[1]	718
[254]	719	IF ( .NOT. found ) THEN
[1320]	720	message_string = 'no output available for: ' // &
[274]	721	TRIM( do3d(av,if) )
[254]	722	CALL message( 'data_output_3d', 'PA0182', 0, 0, 0, 6, 0 )
[1]	723	ENDIF
	724
	725	END SELECT
	726
	727	!
	728	!-- Resort the array to be output, if not done above
	729	IF ( .NOT. resorted ) THEN
[2512]	730	DO i = nxl, nxr
	731	DO j = nys, nyn
[1551]	732	DO k = nzb_do, nzt_do
[2696]	733	local_pf(i,j,k) = MERGE( &
	734	to_be_resorted(k,j,i), &
	735	REAL( fill_value, KIND = wp ), &
	736	BTEST( wall_flags_0(k,j,i), flag_nr ) )
[1]	737	ENDDO
	738	ENDDO
	739	ENDDO
	740	ENDIF
	741
	742	!
[1327]	743	!-- Output of the 3D-array
	744	#if defined( __parallel )
	745	IF ( netcdf_data_format < 5 ) THEN
[1]	746	!
[1327]	747	!-- Non-parallel netCDF output. Data is output in parallel in
	748	!-- FORTRAN binary format here, and later collected into one file by
	749	!-- combine_plot_fields
	750	IF ( myid == 0 ) THEN
	751	WRITE ( 30 ) time_since_reference_point, &
	752	do3d_time_count(av), av
[1]	753	ENDIF
[1327]	754	DO i = 0, io_blocks-1
	755	IF ( i == io_group ) THEN
[2512]	756	WRITE ( 30 ) nxl, nxr, nys, nyn, nzb_do, nzt_do
[1551]	757	WRITE ( 30 ) local_pf(:,:,nzb_do:nzt_do)
[1327]	758	ENDIF
[1972]	759
[1327]	760	CALL MPI_BARRIER( comm2d, ierr )
[1972]	761
[1327]	762	ENDDO
[559]	763
[1327]	764	ELSE
[646]	765	#if defined( __netcdf )
[493]	766	!
[1327]	767	!-- Parallel output in netCDF4/HDF5 format.
[2512]	768	! IF ( nxr == nx .AND. nyn /= ny ) THEN
	769	! nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,if), &
	770	! local_pf(nxl:nxr+1,nys:nyn,nzb_do:nzt_do), &
	771	! start = (/ nxl+1, nys+1, nzb_do+1, do3d_time_count(av) /), &
	772	! count = (/ nxr-nxl+2, nyn-nys+1, nzt_do-nzb_do+1, 1 /) )
	773	! ELSEIF ( nxr /= nx .AND. nyn == ny ) THEN
	774	! nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,if), &
	775	! local_pf(nxl:nxr,nys:nyn+1,nzb_do:nzt_do), &
	776	! start = (/ nxl+1, nys+1, nzb_do+1, do3d_time_count(av) /), &
	777	! count = (/ nxr-nxl+1, nyn-nys+2, nzt_do-nzb_do+1, 1 /) )
	778	! ELSEIF ( nxr == nx .AND. nyn == ny ) THEN
	779	! nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,if), &
	780	! local_pf(nxl:nxr+1,nys:nyn+1,nzb_do:nzt_do ), &
	781	! start = (/ nxl+1, nys+1, nzb_do+1, do3d_time_count(av) /), &
	782	! count = (/ nxr-nxl+2, nyn-nys+2, nzt_do-nzb_do+1, 1 /) )
	783	! ELSE
[1327]	784	nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,if), &
[1551]	785	local_pf(nxl:nxr,nys:nyn,nzb_do:nzt_do), &
	786	start = (/ nxl+1, nys+1, nzb_do+1, do3d_time_count(av) /), &
	787	count = (/ nxr-nxl+1, nyn-nys+1, nzt_do-nzb_do+1, 1 /) )
[2512]	788	! ENDIF
[1783]	789	CALL netcdf_handle_error( 'data_output_3d', 386 )
[646]	790	#endif
[1327]	791	ENDIF
[1]	792	#else
	793	#if defined( __netcdf )
[1327]	794	nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,if), &
[1551]	795	local_pf(nxl:nxr+1,nys:nyn+1,nzb_do:nzt_do), &
[1327]	796	start = (/ 1, 1, 1, do3d_time_count(av) /), &
[2512]	797	count = (/ nx+1, ny+1, nzt_do-nzb_do+1, 1 /) )
[1783]	798	CALL netcdf_handle_error( 'data_output_3d', 446 )
[1]	799	#endif
	800	#endif
	801
	802	if = if + 1
	803
	804	!
[1551]	805	!-- Deallocate temporary array
	806	DEALLOCATE ( local_pf )
[1]	807
[1551]	808	ENDDO
[1]	809
[1318]	810	CALL cpu_log( log_point(14), 'data_output_3d', 'stop' )
[1]	811
	812	!
	813	!-- Formats.
[1320]	814	3300 FORMAT ('variable ',I4,' file=',A,' filetype=unformatted skip=',I12/ &
[1]	815	'label = ',A,A)
	816
	817	END SUBROUTINE data_output_3d

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