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source: palm/trunk/SOURCE/data_output_3d.f90 @ 2723

Last change on this file since 2723 was 2718, checked in by maronga, 7 years ago
deleting of deprecated files; headers updated where needed
Property svn:keywords set to `Id`
File size: 27.0 KB

Rev	Line
[1682]	1	!> @file data_output_3d.f90
[2000]	2	!------------------------------------------------------------------------------!
[2696]	3	! This file is part of the PALM model system.
[1036]	4	!
[2000]	5	! PALM is free software: you can redistribute it and/or modify it under the
	6	! terms of the GNU General Public License as published by the Free Software
	7	! Foundation, either version 3 of the License, or (at your option) any later
	8	! version.
[1036]	9	!
	10	! PALM is distributed in the hope that it will be useful, but WITHOUT ANY
	11	! WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR
	12	! A PARTICULAR PURPOSE. See the GNU General Public License for more details.
	13	!
	14	! You should have received a copy of the GNU General Public License along with
	15	! PALM. If not, see <http://www.gnu.org/licenses/>.
	16	!
[2718]	17	! Copyright 1997-2018 Leibniz Universitaet Hannover
[2000]	18	!------------------------------------------------------------------------------!
[1036]	19	!
[254]	20	! Current revisions:
[1106]	21	! ------------------
[1961]	22	!
[2233]	23	!
[1552]	24	! Former revisions:
	25	! -----------------
	26	! $Id: data_output_3d.f90 2718 2018-01-02 08:49:38Z maronga $
[2716]	27	! Corrected "Former revisions" section
	28	!
	29	! 2696 2017-12-14 17:12:51Z kanani
	30	! Change in file header (GPL part)
[2696]	31	! Implementation of turbulence_closure_mod (TG)
	32	! Implementation of chemistry module (FK)
	33	! Set fill values at topography grid points or e.g. non-natural-type surface
	34	! in case of LSM output (MS)
	35	!
	36	! 2512 2017-10-04 08:26:59Z raasch
[2512]	37	! upper bounds of 3d output changed from nx+1,ny+1 to nx,ny
	38	! no output of ghost layer data
	39	!
	40	! 2292 2017-06-20 09:51:42Z schwenkel
[2292]	41	! Implementation of new microphysic scheme: cloud_scheme = 'morrison'
	42	! includes two more prognostic equations for cloud drop concentration (nc)
	43	! and cloud water content (qc).
	44	!
	45	! 2233 2017-05-30 18:08:54Z suehring
[1552]	46	!
[2233]	47	! 2232 2017-05-30 17:47:52Z suehring
	48	! Adjustments to new topography concept
	49	!
[2210]	50	! 2209 2017-04-19 09:34:46Z kanani
	51	! Added plant canopy model output
	52	!
[2032]	53	! 2031 2016-10-21 15:11:58Z knoop
	54	! renamed variable rho to rho_ocean and rho_av to rho_ocean_av
	55	!
[2012]	56	! 2011 2016-09-19 17:29:57Z kanani
	57	! Flag urban_surface is now defined in module control_parameters,
	58	! changed prefix for urban surface model output to "usm_",
	59	! introduced control parameter varnamelength for LEN of trimvar.
	60	!
[2008]	61	! 2007 2016-08-24 15:47:17Z kanani
	62	! Added support for new urban surface model (temporary modifications of
	63	! SELECT CASE ( ) necessary, see variable trimvar)
	64	!
[2001]	65	! 2000 2016-08-20 18:09:15Z knoop
	66	! Forced header and separation lines into 80 columns
	67	!
[1981]	68	! 1980 2016-07-29 15:51:57Z suehring
	69	! Bugfix, in order to steer user-defined output, setting flag found explicitly
	70	! to .F.
	71	!
[1977]	72	! 1976 2016-07-27 13:28:04Z maronga
	73	! Output of radiation quantities is now done directly in the respective module
	74	!
[1973]	75	! 1972 2016-07-26 07:52:02Z maronga
	76	! Output of land surface quantities is now done directly in the respective module.
	77	! Unnecessary directive __parallel removed.
	78	!
[1961]	79	! 1960 2016-07-12 16:34:24Z suehring
	80	! Scalar surface flux added
	81	!
[1851]	82	! 1849 2016-04-08 11:33:18Z hoffmann
	83	! prr moved to arrays_3d
	84	!
[1823]	85	! 1822 2016-04-07 07:49:42Z hoffmann
	86	! prr vertical dimensions set to nzb_do to nzt_do. Unused variables deleted.
	87	!
[1809]	88	! 1808 2016-04-05 19:44:00Z raasch
	89	! test output removed
	90	!
[1784]	91	! 1783 2016-03-06 18:36:17Z raasch
	92	! name change of netcdf routines and module + related changes
	93	!
[1746]	94	! 1745 2016-02-05 13:06:51Z gronemeier
	95	! Bugfix: test if time axis limit exceeds moved to point after call of check_open
	96	!
[1692]	97	! 1691 2015-10-26 16:17:44Z maronga
	98	! Added output of radiative heating rates for RRTMG
	99	!
[1683]	100	! 1682 2015-10-07 23:56:08Z knoop
	101	! Code annotations made doxygen readable
	102	!
[1586]	103	! 1585 2015-04-30 07:05:52Z maronga
	104	! Added support for RRTMG
	105	!
[1552]	106	! 1551 2015-03-03 14:18:16Z maronga
[1551]	107	! Added suppport for land surface model and radiation model output. In the course
	108	! of this action, the limits for vertical loops have been changed (from nzb and
	109	! nzt+1 to nzb_do and nzt_do, respectively in order to allow soil model output).
	110	! Moreover, a new vertical grid zs was introduced.
[1329]	111	!
[1360]	112	! 1359 2014-04-11 17:15:14Z hoffmann
	113	! New particle structure integrated.
	114	!
[1354]	115	! 1353 2014-04-08 15:21:23Z heinze
	116	! REAL constants provided with KIND-attribute
	117	!
[1329]	118	! 1327 2014-03-21 11:00:16Z raasch
	119	! parts concerning avs output removed,
	120	! -netcdf output queries
	121	!
[1321]	122	! 1320 2014-03-20 08:40:49Z raasch
[1320]	123	! ONLY-attribute added to USE-statements,
	124	! kind-parameters added to all INTEGER and REAL declaration statements,
	125	! kinds are defined in new module kinds,
	126	! old module precision_kind is removed,
	127	! revision history before 2012 removed,
	128	! comment fields (!:) to be used for variable explanations added to
	129	! all variable declaration statements
[674]	130	!
[1319]	131	! 1318 2014-03-17 13:35:16Z raasch
	132	! barrier argument removed from cpu_log,
	133	! module interfaces removed
	134	!
[1309]	135	! 1308 2014-03-13 14:58:42Z fricke
	136	! Check, if the limit of the time dimension is exceeded for parallel output
	137	! To increase the performance for parallel output, the following is done:
	138	! - Update of time axis is only done by PE0
	139	!
[1245]	140	! 1244 2013-10-31 08:16:56Z raasch
	141	! Bugfix for index bounds in case of 3d-parallel output
	142	!
[1116]	143	! 1115 2013-03-26 18:16:16Z hoffmann
	144	! ql is calculated by calc_liquid_water_content
	145	!
[1107]	146	! 1106 2013-03-04 05:31:38Z raasch
	147	! array_kind renamed precision_kind
	148	!
[1077]	149	! 1076 2012-12-05 08:30:18Z hoffmann
	150	! Bugfix in output of ql
	151	!
[1054]	152	! 1053 2012-11-13 17:11:03Z hoffmann
	153	! +nr, qr, prr, qc and averaged quantities
	154	!
[1037]	155	! 1036 2012-10-22 13:43:42Z raasch
	156	! code put under GPL (PALM 3.9)
	157	!
[1035]	158	! 1031 2012-10-19 14:35:30Z raasch
	159	! netCDF4 without parallel file support implemented
	160	!
[1008]	161	! 1007 2012-09-19 14:30:36Z franke
	162	! Bugfix: missing calculation of ql_vp added
	163	!
[1]	164	! Revision 1.1 1997/09/03 06:29:36 raasch
	165	! Initial revision
	166	!
	167	!
	168	! Description:
	169	! ------------
[1682]	170	!> Output of the 3D-arrays in netCDF and/or AVS format.
[1]	171	!------------------------------------------------------------------------------!
[1682]	172	SUBROUTINE data_output_3d( av )
	173
[1]	174
[1320]	175	USE arrays_3d, &
[2292]	176	ONLY: e, nc, nr, p, pt, prr, q, qc, ql, ql_c, ql_v, qr, rho_ocean, s, &
	177	sa, tend, u, v, vpt, w
[1320]	178
[1]	179	USE averaging
[1320]	180
[2696]	181	#if defined( __chem )
	182	USE chemistry_model_mod, &
	183	ONLY: chem_data_output_3d
	184	#endif
	185
[1320]	186	USE cloud_parameters, &
[1849]	187	ONLY: l_d_cp, pt_d_t
[1320]	188
	189	USE control_parameters, &
[2696]	190	ONLY: air_chemistry, cloud_physics, do3d, do3d_no, do3d_time_count, &
	191	io_blocks, io_group, land_surface, message_string, &
	192	ntdim_3d, nz_do3d, &
[2232]	193	psolver, simulated_time, time_since_reference_point, &
	194	urban_surface, varnamelength
[1320]	195
	196	USE cpulog, &
	197	ONLY: log_point, cpu_log
	198
	199	USE indices, &
[2696]	200	ONLY: nbgp, nx, nxl, nxr, ny, nyn, nys, nzb, wall_flags_0
[1320]	201
	202	USE kinds
	203
[1551]	204	USE land_surface_model_mod, &
[2232]	205	ONLY: lsm_data_output_3d, nzb_soil, nzt_soil
[1551]	206
[1783]	207	#if defined( __netcdf )
	208	USE NETCDF
	209	#endif
	210
	211	USE netcdf_interface, &
[2696]	212	ONLY: fill_value, id_set_3d, id_var_do3d, id_var_time_3d, nc_stat, &
[1783]	213	netcdf_data_format, netcdf_handle_error
[1320]	214
	215	USE particle_attributes, &
[1359]	216	ONLY: grid_particles, number_of_particles, particles, &
	217	particle_advection_start, prt_count
[1320]	218
[1]	219	USE pegrid
	220
[2209]	221	USE plant_canopy_model_mod, &
	222	ONLY: pcm_data_output_3d, plant_canopy
	223
[1585]	224	USE radiation_model_mod, &
[2696]	225	ONLY: nzub, nzut, radiation, radiation_data_output_3d
[1585]	226
[2696]	227	USE turbulence_closure_mod, &
	228	ONLY: tcm_data_output_3d
	229
[2007]	230	USE urban_surface_mod, &
[2696]	231	ONLY: usm_data_output_3d
[1585]	232
[2007]	233
[1]	234	IMPLICIT NONE
	235
[1682]	236	INTEGER(iwp) :: av !<
[2696]	237	INTEGER(iwp) :: flag_nr !< number of masking flag
[1682]	238	INTEGER(iwp) :: i !<
	239	INTEGER(iwp) :: if !<
	240	INTEGER(iwp) :: j !<
	241	INTEGER(iwp) :: k !<
	242	INTEGER(iwp) :: n !<
	243	INTEGER(iwp) :: nzb_do !< vertical lower limit for data output
	244	INTEGER(iwp) :: nzt_do !< vertical upper limit for data output
[1]	245
[1682]	246	LOGICAL :: found !<
	247	LOGICAL :: resorted !<
[1]	248
[1682]	249	REAL(wp) :: mean_r !<
	250	REAL(wp) :: s_r2 !<
	251	REAL(wp) :: s_r3 !<
[1]	252
[1682]	253	REAL(sp), DIMENSION(:,:,:), ALLOCATABLE :: local_pf !<
[1]	254
[1682]	255	REAL(wp), DIMENSION(:,:,:), POINTER :: to_be_resorted !<
[1]	256
[2011]	257	CHARACTER (LEN=varnamelength) :: trimvar !< TRIM of output-variable string
[2007]	258
[1]	259	!
	260	!-- Return, if nothing to output
	261	IF ( do3d_no(av) == 0 ) RETURN
	262
	263	CALL cpu_log (log_point(14),'data_output_3d','start')
	264
	265	!
	266	!-- Open output file.
[2512]	267	!-- For classic or 64bit netCDF output on more than one PE, each PE opens its
	268	!-- own file and writes the data of its subdomain in binary format. After the
	269	!-- run, these files are combined to one NetCDF file by combine_plot_fields.
[1031]	270	!-- For netCDF4/HDF5 output, data is written in parallel into one file.
[1327]	271	IF ( netcdf_data_format < 5 ) THEN
	272	CALL check_open( 30 )
	273	IF ( myid == 0 ) CALL check_open( 106+av*10 )
[493]	274	ELSE
[1327]	275	CALL check_open( 106+av*10 )
[493]	276	ENDIF
[1]	277
	278	!
[1745]	279	!-- For parallel netcdf output the time axis must be limited. Return, if this
	280	!-- limit is exceeded. This could be the case, if the simulated time exceeds
	281	!-- the given end time by the length of the given output interval.
	282	IF ( netcdf_data_format > 4 ) THEN
	283	IF ( do3d_time_count(av) + 1 > ntdim_3d(av) ) THEN
	284	WRITE ( message_string, * ) 'Output of 3d data is not given at t=', &
	285	simulated_time, '&because the maximum ', &
	286	'number of output time levels is ', &
	287	'exceeded.'
	288	CALL message( 'data_output_3d', 'PA0387', 0, 1, 0, 6, 0 )
	289	CALL cpu_log( log_point(14), 'data_output_3d', 'stop' )
	290	RETURN
	291	ENDIF
	292	ENDIF
	293
	294	!
[1031]	295	!-- Update the netCDF time axis
[1308]	296	!-- In case of parallel output, this is only done by PE0 to increase the
	297	!-- performance.
[1]	298	#if defined( __netcdf )
[1308]	299	do3d_time_count(av) = do3d_time_count(av) + 1
	300	IF ( myid == 0 ) THEN
[1327]	301	nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_time_3d(av), &
	302	(/ time_since_reference_point /), &
	303	start = (/ do3d_time_count(av) /), &
	304	count = (/ 1 /) )
[1783]	305	CALL netcdf_handle_error( 'data_output_3d', 376 )
[1]	306	ENDIF
	307	#endif
	308
	309	!
	310	!-- Loop over all variables to be written.
	311	if = 1
	312
	313	DO WHILE ( do3d(av,if)(1:1) /= ' ' )
[2007]	314
[1]	315	!
[2007]	316	!-- Temporary solution to account for data output within the new urban
	317	!-- surface model (urban_surface_mod.f90), see also SELECT CASE ( trimvar ).
[1]	318	!-- Store the array chosen on the temporary array.
[2007]	319	trimvar = TRIM( do3d(av,if) )
[2011]	320	IF ( urban_surface .AND. trimvar(1:4) == 'usm_' ) THEN
[2007]	321	trimvar = 'usm_output'
	322	resorted = .TRUE.
	323	nzb_do = nzub
	324	nzt_do = nzut
	325	ELSE
	326	resorted = .FALSE.
	327	nzb_do = nzb
	328	nzt_do = nz_do3d
	329	ENDIF
[1551]	330	!
[1980]	331	!-- Set flag to steer output of radiation, land-surface, or user-defined
	332	!-- quantities
	333	found = .FALSE.
	334	!
[1551]	335	!-- Allocate a temporary array with the desired output dimensions.
[2512]	336	ALLOCATE( local_pf(nxl:nxr,nys:nyn,nzb_do:nzt_do) )
[2696]	337	!
	338	!-- Before each output, set array local_pf to fill value
	339	local_pf = fill_value
	340	!
	341	!-- Set masking flag for topography for not resorted arrays
	342	flag_nr = 0
[1551]	343
[2007]	344	SELECT CASE ( trimvar )
[1]	345
	346	CASE ( 'e' )
	347	IF ( av == 0 ) THEN
	348	to_be_resorted => e
	349	ELSE
	350	to_be_resorted => e_av
	351	ENDIF
	352
[771]	353	CASE ( 'lpt' )
	354	IF ( av == 0 ) THEN
	355	to_be_resorted => pt
	356	ELSE
	357	to_be_resorted => lpt_av
	358	ENDIF
	359
[2292]	360	CASE ( 'nc' )
	361	IF ( av == 0 ) THEN
	362	to_be_resorted => nc
	363	ELSE
	364	to_be_resorted => nc_av
	365	ENDIF
	366
[1053]	367	CASE ( 'nr' )
	368	IF ( av == 0 ) THEN
	369	to_be_resorted => nr
	370	ELSE
	371	to_be_resorted => nr_av
	372	ENDIF
	373
[1]	374	CASE ( 'p' )
	375	IF ( av == 0 ) THEN
[727]	376	IF ( psolver /= 'sor' ) CALL exchange_horiz( p, nbgp )
[1]	377	to_be_resorted => p
	378	ELSE
[727]	379	IF ( psolver /= 'sor' ) CALL exchange_horiz( p_av, nbgp )
[1]	380	to_be_resorted => p_av
	381	ENDIF
	382
	383	CASE ( 'pc' ) ! particle concentration (requires ghostpoint exchange)
	384	IF ( av == 0 ) THEN
[1359]	385	IF ( simulated_time >= particle_advection_start ) THEN
	386	tend = prt_count
	387	ELSE
	388	tend = 0.0_wp
	389	ENDIF
[2512]	390	DO i = nxl, nxr
	391	DO j = nys, nyn
[1551]	392	DO k = nzb_do, nzt_do
[1]	393	local_pf(i,j,k) = tend(k,j,i)
	394	ENDDO
	395	ENDDO
	396	ENDDO
	397	resorted = .TRUE.
	398	ELSE
	399	to_be_resorted => pc_av
	400	ENDIF
	401
[1359]	402	CASE ( 'pr' ) ! mean particle radius (effective radius)
[1]	403	IF ( av == 0 ) THEN
[1359]	404	IF ( simulated_time >= particle_advection_start ) THEN
	405	DO i = nxl, nxr
	406	DO j = nys, nyn
[1551]	407	DO k = nzb_do, nzt_do
[1359]	408	number_of_particles = prt_count(k,j,i)
	409	IF (number_of_particles <= 0) CYCLE
	410	particles => grid_particles(k,j,i)%particles(1:number_of_particles)
	411	s_r2 = 0.0_wp
	412	s_r3 = 0.0_wp
	413	DO n = 1, number_of_particles
	414	IF ( particles(n)%particle_mask ) THEN
	415	s_r2 = s_r2 + particles(n)%radius*2 &
	416	particles(n)%weight_factor
	417	s_r3 = s_r3 + particles(n)%radius*3 &
	418	particles(n)%weight_factor
	419	ENDIF
	420	ENDDO
	421	IF ( s_r2 > 0.0_wp ) THEN
	422	mean_r = s_r3 / s_r2
	423	ELSE
	424	mean_r = 0.0_wp
	425	ENDIF
	426	tend(k,j,i) = mean_r
[1]	427	ENDDO
	428	ENDDO
	429	ENDDO
[1359]	430	ELSE
	431	tend = 0.0_wp
	432	ENDIF
[2512]	433	DO i = nxl, nxr
	434	DO j = nys, nyn
[1551]	435	DO k = nzb_do, nzt_do
[1]	436	local_pf(i,j,k) = tend(k,j,i)
	437	ENDDO
	438	ENDDO
	439	ENDDO
	440	resorted = .TRUE.
	441	ELSE
	442	to_be_resorted => pr_av
	443	ENDIF
	444
[1053]	445	CASE ( 'prr' )
	446	IF ( av == 0 ) THEN
[2512]	447	DO i = nxl, nxr
	448	DO j = nys, nyn
[1822]	449	DO k = nzb_do, nzt_do
[1053]	450	local_pf(i,j,k) = prr(k,j,i)
	451	ENDDO
	452	ENDDO
	453	ENDDO
	454	ELSE
[2512]	455	DO i = nxl, nxr
	456	DO j = nys, nyn
[1822]	457	DO k = nzb_do, nzt_do
[1053]	458	local_pf(i,j,k) = prr_av(k,j,i)
	459	ENDDO
	460	ENDDO
	461	ENDDO
	462	ENDIF
	463	resorted = .TRUE.
	464
[1]	465	CASE ( 'pt' )
	466	IF ( av == 0 ) THEN
	467	IF ( .NOT. cloud_physics ) THEN
	468	to_be_resorted => pt
	469	ELSE
[2512]	470	DO i = nxl, nxr
	471	DO j = nys, nyn
[1551]	472	DO k = nzb_do, nzt_do
[1320]	473	local_pf(i,j,k) = pt(k,j,i) + l_d_cp * &
	474	pt_d_t(k) * &
[1]	475	ql(k,j,i)
	476	ENDDO
	477	ENDDO
	478	ENDDO
	479	resorted = .TRUE.
	480	ENDIF
	481	ELSE
	482	to_be_resorted => pt_av
	483	ENDIF
	484
	485	CASE ( 'q' )
	486	IF ( av == 0 ) THEN
	487	to_be_resorted => q
	488	ELSE
	489	to_be_resorted => q_av
	490	ENDIF
[691]	491
[1053]	492	CASE ( 'qc' )
[1]	493	IF ( av == 0 ) THEN
[1115]	494	to_be_resorted => qc
[1]	495	ELSE
[1115]	496	to_be_resorted => qc_av
[1]	497	ENDIF
	498
[1053]	499	CASE ( 'ql' )
	500	IF ( av == 0 ) THEN
[1115]	501	to_be_resorted => ql
[1053]	502	ELSE
[1115]	503	to_be_resorted => ql_av
[1053]	504	ENDIF
	505
[1]	506	CASE ( 'ql_c' )
	507	IF ( av == 0 ) THEN
	508	to_be_resorted => ql_c
	509	ELSE
	510	to_be_resorted => ql_c_av
	511	ENDIF
	512
	513	CASE ( 'ql_v' )
	514	IF ( av == 0 ) THEN
	515	to_be_resorted => ql_v
	516	ELSE
	517	to_be_resorted => ql_v_av
	518	ENDIF
	519
	520	CASE ( 'ql_vp' )
	521	IF ( av == 0 ) THEN
[1359]	522	IF ( simulated_time >= particle_advection_start ) THEN
	523	DO i = nxl, nxr
	524	DO j = nys, nyn
[1551]	525	DO k = nzb_do, nzt_do
[1359]	526	number_of_particles = prt_count(k,j,i)
	527	IF (number_of_particles <= 0) CYCLE
	528	particles => grid_particles(k,j,i)%particles(1:number_of_particles)
	529	DO n = 1, number_of_particles
	530	IF ( particles(n)%particle_mask ) THEN
	531	tend(k,j,i) = tend(k,j,i) + &
	532	particles(n)%weight_factor / &
	533	prt_count(k,j,i)
	534	ENDIF
	535	ENDDO
[1007]	536	ENDDO
	537	ENDDO
	538	ENDDO
[1359]	539	ELSE
	540	tend = 0.0_wp
	541	ENDIF
[2512]	542	DO i = nxl, nxr
	543	DO j = nys, nyn
[1551]	544	DO k = nzb_do, nzt_do
[1007]	545	local_pf(i,j,k) = tend(k,j,i)
	546	ENDDO
	547	ENDDO
	548	ENDDO
	549	resorted = .TRUE.
[1]	550	ELSE
	551	to_be_resorted => ql_vp_av
	552	ENDIF
	553
[1053]	554	CASE ( 'qr' )
	555	IF ( av == 0 ) THEN
	556	to_be_resorted => qr
	557	ELSE
	558	to_be_resorted => qr_av
	559	ENDIF
	560
[1]	561	CASE ( 'qv' )
	562	IF ( av == 0 ) THEN
[2512]	563	DO i = nxl, nxr
	564	DO j = nys, nyn
[1551]	565	DO k = nzb_do, nzt_do
[1]	566	local_pf(i,j,k) = q(k,j,i) - ql(k,j,i)
	567	ENDDO
	568	ENDDO
	569	ENDDO
	570	resorted = .TRUE.
	571	ELSE
	572	to_be_resorted => qv_av
	573	ENDIF
	574
[2031]	575	CASE ( 'rho_ocean' )
[96]	576	IF ( av == 0 ) THEN
[2031]	577	to_be_resorted => rho_ocean
[96]	578	ELSE
[2031]	579	to_be_resorted => rho_ocean_av
[96]	580	ENDIF
[691]	581
[1]	582	CASE ( 's' )
	583	IF ( av == 0 ) THEN
[1960]	584	to_be_resorted => s
[1]	585	ELSE
[355]	586	to_be_resorted => s_av
[1]	587	ENDIF
[691]	588
[96]	589	CASE ( 'sa' )
	590	IF ( av == 0 ) THEN
	591	to_be_resorted => sa
	592	ELSE
	593	to_be_resorted => sa_av
	594	ENDIF
[691]	595
[1]	596	CASE ( 'u' )
[2696]	597	flag_nr = 1
[1]	598	IF ( av == 0 ) THEN
	599	to_be_resorted => u
	600	ELSE
	601	to_be_resorted => u_av
	602	ENDIF
	603
	604	CASE ( 'v' )
[2696]	605	flag_nr = 2
[1]	606	IF ( av == 0 ) THEN
	607	to_be_resorted => v
	608	ELSE
	609	to_be_resorted => v_av
	610	ENDIF
	611
	612	CASE ( 'vpt' )
	613	IF ( av == 0 ) THEN
	614	to_be_resorted => vpt
	615	ELSE
	616	to_be_resorted => vpt_av
	617	ENDIF
	618
	619	CASE ( 'w' )
[2696]	620	flag_nr = 3
[1]	621	IF ( av == 0 ) THEN
	622	to_be_resorted => w
	623	ELSE
	624	to_be_resorted => w_av
	625	ENDIF
[2007]	626	!
	627	!-- Block of urban surface model outputs
	628	CASE ( 'usm_output' )
	629	CALL usm_data_output_3d( av, do3d(av,if), found, local_pf, &
	630	nzb_do, nzt_do )
[1]	631
	632	CASE DEFAULT
[1972]	633
[1]	634	!
[1972]	635	!-- Land surface quantity
	636	IF ( land_surface ) THEN
	637	!
	638	!-- For soil model quantities, it is required to re-allocate local_pf
	639	nzb_do = nzb_soil
	640	nzt_do = nzt_soil
	641
	642	DEALLOCATE ( local_pf )
[2512]	643	ALLOCATE( local_pf(nxl:nxr,nys:nyn,nzb_do:nzt_do) )
[2696]	644	local_pf = fill_value
[1972]	645
	646	CALL lsm_data_output_3d( av, do3d(av,if), found, local_pf )
	647	resorted = .TRUE.
[1976]	648
	649	!
	650	!-- If no soil model variable was found, re-allocate local_pf
	651	IF ( .NOT. found ) THEN
	652	nzb_do = nzb
	653	nzt_do = nz_do3d
	654
	655	DEALLOCATE ( local_pf )
[2512]	656	ALLOCATE( local_pf(nxl:nxr,nys:nyn,nzb_do:nzt_do) )
[1976]	657	ENDIF
	658
[1972]	659	ENDIF
	660
[2696]	661	IF ( .NOT. found ) THEN
	662	CALL tcm_data_output_3d( av, do3d(av,if), found, local_pf )
	663	resorted = .TRUE.
	664	ENDIF
	665
[1972]	666	!
[1976]	667	!-- Radiation quantity
	668	IF ( .NOT. found .AND. radiation ) THEN
	669	CALL radiation_data_output_3d( av, do3d(av,if), found, &
	670	local_pf )
	671	resorted = .TRUE.
	672	ENDIF
	673
	674	!
[2696]	675	!-- Chemistry model output
	676	#if defined( __chem )
	677	IF ( .NOT. found .AND. air_chemistry ) THEN
	678	CALL chem_data_output_3d( av, do3d(av,if), found, &
	679	local_pf )
	680	resorted = .TRUE.
	681	ENDIF
	682	#endif
	683
	684	!
[2209]	685	!-- Plant canopy model output
	686	IF ( .NOT. found .AND. plant_canopy ) THEN
[2696]	687	CALL pcm_data_output_3d( av, do3d(av,if), found, local_pf, &
	688	fill_value )
[2209]	689	resorted = .TRUE.
	690	ENDIF
	691
	692	!
[1]	693	!-- User defined quantity
[1972]	694	IF ( .NOT. found ) THEN
	695	CALL user_data_output_3d( av, do3d(av,if), found, local_pf, &
	696	nzb_do, nzt_do )
	697	resorted = .TRUE.
	698	ENDIF
[1]	699
[254]	700	IF ( .NOT. found ) THEN
[1320]	701	message_string = 'no output available for: ' // &
[274]	702	TRIM( do3d(av,if) )
[254]	703	CALL message( 'data_output_3d', 'PA0182', 0, 0, 0, 6, 0 )
[1]	704	ENDIF
	705
	706	END SELECT
	707
	708	!
	709	!-- Resort the array to be output, if not done above
	710	IF ( .NOT. resorted ) THEN
[2512]	711	DO i = nxl, nxr
	712	DO j = nys, nyn
[1551]	713	DO k = nzb_do, nzt_do
[2696]	714	local_pf(i,j,k) = MERGE( &
	715	to_be_resorted(k,j,i), &
	716	REAL( fill_value, KIND = wp ), &
	717	BTEST( wall_flags_0(k,j,i), flag_nr ) )
[1]	718	ENDDO
	719	ENDDO
	720	ENDDO
	721	ENDIF
	722
	723	!
[1327]	724	!-- Output of the 3D-array
	725	#if defined( __parallel )
	726	IF ( netcdf_data_format < 5 ) THEN
[1]	727	!
[1327]	728	!-- Non-parallel netCDF output. Data is output in parallel in
	729	!-- FORTRAN binary format here, and later collected into one file by
	730	!-- combine_plot_fields
	731	IF ( myid == 0 ) THEN
	732	WRITE ( 30 ) time_since_reference_point, &
	733	do3d_time_count(av), av
[1]	734	ENDIF
[1327]	735	DO i = 0, io_blocks-1
	736	IF ( i == io_group ) THEN
[2512]	737	WRITE ( 30 ) nxl, nxr, nys, nyn, nzb_do, nzt_do
[1551]	738	WRITE ( 30 ) local_pf(:,:,nzb_do:nzt_do)
[1327]	739	ENDIF
[1972]	740
[1327]	741	CALL MPI_BARRIER( comm2d, ierr )
[1972]	742
[1327]	743	ENDDO
[559]	744
[1327]	745	ELSE
[646]	746	#if defined( __netcdf )
[493]	747	!
[1327]	748	!-- Parallel output in netCDF4/HDF5 format.
[2512]	749	! IF ( nxr == nx .AND. nyn /= ny ) THEN
	750	! nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,if), &
	751	! local_pf(nxl:nxr+1,nys:nyn,nzb_do:nzt_do), &
	752	! start = (/ nxl+1, nys+1, nzb_do+1, do3d_time_count(av) /), &
	753	! count = (/ nxr-nxl+2, nyn-nys+1, nzt_do-nzb_do+1, 1 /) )
	754	! ELSEIF ( nxr /= nx .AND. nyn == ny ) THEN
	755	! nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,if), &
	756	! local_pf(nxl:nxr,nys:nyn+1,nzb_do:nzt_do), &
	757	! start = (/ nxl+1, nys+1, nzb_do+1, do3d_time_count(av) /), &
	758	! count = (/ nxr-nxl+1, nyn-nys+2, nzt_do-nzb_do+1, 1 /) )
	759	! ELSEIF ( nxr == nx .AND. nyn == ny ) THEN
	760	! nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,if), &
	761	! local_pf(nxl:nxr+1,nys:nyn+1,nzb_do:nzt_do ), &
	762	! start = (/ nxl+1, nys+1, nzb_do+1, do3d_time_count(av) /), &
	763	! count = (/ nxr-nxl+2, nyn-nys+2, nzt_do-nzb_do+1, 1 /) )
	764	! ELSE
[1327]	765	nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,if), &
[1551]	766	local_pf(nxl:nxr,nys:nyn,nzb_do:nzt_do), &
	767	start = (/ nxl+1, nys+1, nzb_do+1, do3d_time_count(av) /), &
	768	count = (/ nxr-nxl+1, nyn-nys+1, nzt_do-nzb_do+1, 1 /) )
[2512]	769	! ENDIF
[1783]	770	CALL netcdf_handle_error( 'data_output_3d', 386 )
[646]	771	#endif
[1327]	772	ENDIF
[1]	773	#else
	774	#if defined( __netcdf )
[1327]	775	nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,if), &
[1551]	776	local_pf(nxl:nxr+1,nys:nyn+1,nzb_do:nzt_do), &
[1327]	777	start = (/ 1, 1, 1, do3d_time_count(av) /), &
[2512]	778	count = (/ nx+1, ny+1, nzt_do-nzb_do+1, 1 /) )
[1783]	779	CALL netcdf_handle_error( 'data_output_3d', 446 )
[1]	780	#endif
	781	#endif
	782
	783	if = if + 1
	784
	785	!
[1551]	786	!-- Deallocate temporary array
	787	DEALLOCATE ( local_pf )
[1]	788
[1551]	789	ENDDO
[1]	790
[1318]	791	CALL cpu_log( log_point(14), 'data_output_3d', 'stop' )
[1]	792
	793	!
	794	!-- Formats.
[1320]	795	3300 FORMAT ('variable ',I4,' file=',A,' filetype=unformatted skip=',I12/ &
[1]	796	'label = ',A,A)
	797
	798	END SUBROUTINE data_output_3d

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