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source: palm/trunk/SOURCE/data_output_3d.f90 @ 2221

Last change on this file since 2221 was 2210, checked in by kanani, 8 years ago
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[1682]	1	!> @file data_output_3d.f90
[2000]	2	!------------------------------------------------------------------------------!
[1036]	3	! This file is part of PALM.
	4	!
[2000]	5	! PALM is free software: you can redistribute it and/or modify it under the
	6	! terms of the GNU General Public License as published by the Free Software
	7	! Foundation, either version 3 of the License, or (at your option) any later
	8	! version.
[1036]	9	!
	10	! PALM is distributed in the hope that it will be useful, but WITHOUT ANY
	11	! WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR
	12	! A PARTICULAR PURPOSE. See the GNU General Public License for more details.
	13	!
	14	! You should have received a copy of the GNU General Public License along with
	15	! PALM. If not, see <http://www.gnu.org/licenses/>.
	16	!
[2101]	17	! Copyright 1997-2017 Leibniz Universitaet Hannover
[2000]	18	!------------------------------------------------------------------------------!
[1036]	19	!
[254]	20	! Current revisions:
[1106]	21	! ------------------
[1961]	22	!
[2210]	23	!
[1552]	24	! Former revisions:
	25	! -----------------
	26	! $Id: data_output_3d.f90 2210 2017-04-19 09:35:50Z kanani $
	27	!
[2210]	28	! 2209 2017-04-19 09:34:46Z kanani
	29	! Added plant canopy model output
	30	!
[2032]	31	! 2031 2016-10-21 15:11:58Z knoop
	32	! renamed variable rho to rho_ocean and rho_av to rho_ocean_av
	33	!
[2012]	34	! 2011 2016-09-19 17:29:57Z kanani
	35	! Flag urban_surface is now defined in module control_parameters,
	36	! changed prefix for urban surface model output to "usm_",
	37	! introduced control parameter varnamelength for LEN of trimvar.
	38	!
[2008]	39	! 2007 2016-08-24 15:47:17Z kanani
	40	! Added support for new urban surface model (temporary modifications of
	41	! SELECT CASE ( ) necessary, see variable trimvar)
	42	!
[2001]	43	! 2000 2016-08-20 18:09:15Z knoop
	44	! Forced header and separation lines into 80 columns
	45	!
[1981]	46	! 1980 2016-07-29 15:51:57Z suehring
	47	! Bugfix, in order to steer user-defined output, setting flag found explicitly
	48	! to .F.
	49	!
[1977]	50	! 1976 2016-07-27 13:28:04Z maronga
	51	! Output of radiation quantities is now done directly in the respective module
	52	!
[1973]	53	! 1972 2016-07-26 07:52:02Z maronga
	54	! Output of land surface quantities is now done directly in the respective module.
	55	! Unnecessary directive __parallel removed.
	56	!
[1961]	57	! 1960 2016-07-12 16:34:24Z suehring
	58	! Scalar surface flux added
	59	!
[1851]	60	! 1849 2016-04-08 11:33:18Z hoffmann
	61	! prr moved to arrays_3d
	62	!
[1823]	63	! 1822 2016-04-07 07:49:42Z hoffmann
	64	! prr vertical dimensions set to nzb_do to nzt_do. Unused variables deleted.
	65	!
[1809]	66	! 1808 2016-04-05 19:44:00Z raasch
	67	! test output removed
	68	!
[1784]	69	! 1783 2016-03-06 18:36:17Z raasch
	70	! name change of netcdf routines and module + related changes
	71	!
[1746]	72	! 1745 2016-02-05 13:06:51Z gronemeier
	73	! Bugfix: test if time axis limit exceeds moved to point after call of check_open
	74	!
[1692]	75	! 1691 2015-10-26 16:17:44Z maronga
	76	! Added output of radiative heating rates for RRTMG
	77	!
[1683]	78	! 1682 2015-10-07 23:56:08Z knoop
	79	! Code annotations made doxygen readable
	80	!
[1586]	81	! 1585 2015-04-30 07:05:52Z maronga
	82	! Added support for RRTMG
	83	!
[1552]	84	! 1551 2015-03-03 14:18:16Z maronga
[1551]	85	! Added suppport for land surface model and radiation model output. In the course
	86	! of this action, the limits for vertical loops have been changed (from nzb and
	87	! nzt+1 to nzb_do and nzt_do, respectively in order to allow soil model output).
	88	! Moreover, a new vertical grid zs was introduced.
[1329]	89	!
[1360]	90	! 1359 2014-04-11 17:15:14Z hoffmann
	91	! New particle structure integrated.
	92	!
[1354]	93	! 1353 2014-04-08 15:21:23Z heinze
	94	! REAL constants provided with KIND-attribute
	95	!
[1329]	96	! 1327 2014-03-21 11:00:16Z raasch
	97	! parts concerning avs output removed,
	98	! -netcdf output queries
	99	!
[1321]	100	! 1320 2014-03-20 08:40:49Z raasch
[1320]	101	! ONLY-attribute added to USE-statements,
	102	! kind-parameters added to all INTEGER and REAL declaration statements,
	103	! kinds are defined in new module kinds,
	104	! old module precision_kind is removed,
	105	! revision history before 2012 removed,
	106	! comment fields (!:) to be used for variable explanations added to
	107	! all variable declaration statements
[674]	108	!
[1319]	109	! 1318 2014-03-17 13:35:16Z raasch
	110	! barrier argument removed from cpu_log,
	111	! module interfaces removed
	112	!
[1309]	113	! 1308 2014-03-13 14:58:42Z fricke
	114	! Check, if the limit of the time dimension is exceeded for parallel output
	115	! To increase the performance for parallel output, the following is done:
	116	! - Update of time axis is only done by PE0
	117	!
[1245]	118	! 1244 2013-10-31 08:16:56Z raasch
	119	! Bugfix for index bounds in case of 3d-parallel output
	120	!
[1116]	121	! 1115 2013-03-26 18:16:16Z hoffmann
	122	! ql is calculated by calc_liquid_water_content
	123	!
[1107]	124	! 1106 2013-03-04 05:31:38Z raasch
	125	! array_kind renamed precision_kind
	126	!
[1077]	127	! 1076 2012-12-05 08:30:18Z hoffmann
	128	! Bugfix in output of ql
	129	!
[1054]	130	! 1053 2012-11-13 17:11:03Z hoffmann
	131	! +nr, qr, prr, qc and averaged quantities
	132	!
[1037]	133	! 1036 2012-10-22 13:43:42Z raasch
	134	! code put under GPL (PALM 3.9)
	135	!
[1035]	136	! 1031 2012-10-19 14:35:30Z raasch
	137	! netCDF4 without parallel file support implemented
	138	!
[1008]	139	! 1007 2012-09-19 14:30:36Z franke
	140	! Bugfix: missing calculation of ql_vp added
	141	!
[1]	142	! Revision 1.1 1997/09/03 06:29:36 raasch
	143	! Initial revision
	144	!
	145	!
	146	! Description:
	147	! ------------
[1682]	148	!> Output of the 3D-arrays in netCDF and/or AVS format.
[1]	149	!------------------------------------------------------------------------------!
[1682]	150	SUBROUTINE data_output_3d( av )
	151
[1]	152
[1320]	153	USE arrays_3d, &
[2031]	154	ONLY: e, nr, p, pt, prr, q, qc, ql, ql_c, ql_v, qr, rho_ocean, s, sa, tend, &
[1960]	155	u, v, vpt, w
[1320]	156
[1]	157	USE averaging
[1320]	158
	159	USE cloud_parameters, &
[1849]	160	ONLY: l_d_cp, pt_d_t
[1320]	161
	162	USE control_parameters, &
[1822]	163	ONLY: cloud_physics, do3d, do3d_no, do3d_time_count, io_blocks, &
	164	io_group, message_string, ntdim_3d, nz_do3d, psolver, &
[2011]	165	simulated_time, time_since_reference_point, urban_surface, &
	166	varnamelength
[1320]	167
	168	USE cpulog, &
	169	ONLY: log_point, cpu_log
	170
	171	USE indices, &
[1822]	172	ONLY: nbgp, nx, nxl, nxlg, nxr, nxrg, ny, nyn, nyng, nys, nysg, nzb
[1320]	173
	174	USE kinds
	175
[1551]	176	USE land_surface_model_mod, &
[1972]	177	ONLY: land_surface, lsm_data_output_3d, nzb_soil, nzt_soil
[1551]	178
[1783]	179	#if defined( __netcdf )
	180	USE NETCDF
	181	#endif
	182
	183	USE netcdf_interface, &
	184	ONLY: id_set_3d, id_var_do3d, id_var_time_3d, nc_stat, &
	185	netcdf_data_format, netcdf_handle_error
[1320]	186
	187	USE particle_attributes, &
[1359]	188	ONLY: grid_particles, number_of_particles, particles, &
	189	particle_advection_start, prt_count
[1320]	190
[1]	191	USE pegrid
	192
[2209]	193	USE plant_canopy_model_mod, &
	194	ONLY: pcm_data_output_3d, plant_canopy
	195
[1585]	196	USE radiation_model_mod, &
[1976]	197	ONLY: radiation, radiation_data_output_3d
[1585]	198
[2007]	199	USE urban_surface_mod, &
[2011]	200	ONLY: nzub, nzut, usm_data_output_3d
[1585]	201
[2007]	202
[1]	203	IMPLICIT NONE
	204
[1682]	205	INTEGER(iwp) :: av !<
	206	INTEGER(iwp) :: i !<
	207	INTEGER(iwp) :: if !<
	208	INTEGER(iwp) :: j !<
	209	INTEGER(iwp) :: k !<
	210	INTEGER(iwp) :: n !<
	211	INTEGER(iwp) :: nzb_do !< vertical lower limit for data output
	212	INTEGER(iwp) :: nzt_do !< vertical upper limit for data output
[1]	213
[1682]	214	LOGICAL :: found !<
	215	LOGICAL :: resorted !<
[1]	216
[1682]	217	REAL(wp) :: mean_r !<
	218	REAL(wp) :: s_r2 !<
	219	REAL(wp) :: s_r3 !<
[1]	220
[1682]	221	REAL(sp), DIMENSION(:,:,:), ALLOCATABLE :: local_pf !<
[1]	222
[1682]	223	REAL(wp), DIMENSION(:,:,:), POINTER :: to_be_resorted !<
[1]	224
[2011]	225	CHARACTER (LEN=varnamelength) :: trimvar !< TRIM of output-variable string
[2007]	226
[1]	227	!
	228	!-- Return, if nothing to output
	229	IF ( do3d_no(av) == 0 ) RETURN
	230
	231	CALL cpu_log (log_point(14),'data_output_3d','start')
	232
	233	!
	234	!-- Open output file.
	235	!-- Also creates coordinate and fld-file for AVS.
[1031]	236	!-- For classic or 64bit netCDF output or output of other (old) data formats,
[493]	237	!-- for a run on more than one PE, each PE opens its own file and
[1]	238	!-- writes the data of its subdomain in binary format (regardless of the format
	239	!-- the user has requested). After the run, these files are combined to one
	240	!-- file by combine_plot_fields in the format requested by the user (netcdf
[493]	241	!-- and/or avs).
[1031]	242	!-- For netCDF4/HDF5 output, data is written in parallel into one file.
[1327]	243	IF ( netcdf_data_format < 5 ) THEN
	244	CALL check_open( 30 )
	245	IF ( myid == 0 ) CALL check_open( 106+av*10 )
[493]	246	ELSE
[1327]	247	CALL check_open( 106+av*10 )
[493]	248	ENDIF
[1]	249
	250	!
[1745]	251	!-- For parallel netcdf output the time axis must be limited. Return, if this
	252	!-- limit is exceeded. This could be the case, if the simulated time exceeds
	253	!-- the given end time by the length of the given output interval.
	254	IF ( netcdf_data_format > 4 ) THEN
	255	IF ( do3d_time_count(av) + 1 > ntdim_3d(av) ) THEN
	256	WRITE ( message_string, * ) 'Output of 3d data is not given at t=', &
	257	simulated_time, '&because the maximum ', &
	258	'number of output time levels is ', &
	259	'exceeded.'
	260	CALL message( 'data_output_3d', 'PA0387', 0, 1, 0, 6, 0 )
	261	CALL cpu_log( log_point(14), 'data_output_3d', 'stop' )
	262	RETURN
	263	ENDIF
	264	ENDIF
	265
	266	!
[1031]	267	!-- Update the netCDF time axis
[1308]	268	!-- In case of parallel output, this is only done by PE0 to increase the
	269	!-- performance.
[1]	270	#if defined( __netcdf )
[1308]	271	do3d_time_count(av) = do3d_time_count(av) + 1
	272	IF ( myid == 0 ) THEN
[1327]	273	nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_time_3d(av), &
	274	(/ time_since_reference_point /), &
	275	start = (/ do3d_time_count(av) /), &
	276	count = (/ 1 /) )
[1783]	277	CALL netcdf_handle_error( 'data_output_3d', 376 )
[1]	278	ENDIF
	279	#endif
	280
	281	!
	282	!-- Loop over all variables to be written.
	283	if = 1
	284
	285	DO WHILE ( do3d(av,if)(1:1) /= ' ' )
[2007]	286
[1]	287	!
[2007]	288	!-- Temporary solution to account for data output within the new urban
	289	!-- surface model (urban_surface_mod.f90), see also SELECT CASE ( trimvar ).
[1]	290	!-- Store the array chosen on the temporary array.
[2007]	291	trimvar = TRIM( do3d(av,if) )
[2011]	292	IF ( urban_surface .AND. trimvar(1:4) == 'usm_' ) THEN
[2007]	293	trimvar = 'usm_output'
	294	resorted = .TRUE.
	295	nzb_do = nzub
	296	nzt_do = nzut
	297	ELSE
	298	resorted = .FALSE.
	299	nzb_do = nzb
	300	nzt_do = nz_do3d
	301	ENDIF
[1551]	302	!
[1980]	303	!-- Set flag to steer output of radiation, land-surface, or user-defined
	304	!-- quantities
	305	found = .FALSE.
	306	!
[1551]	307	!-- Allocate a temporary array with the desired output dimensions.
	308	ALLOCATE( local_pf(nxlg:nxrg,nysg:nyng,nzb_do:nzt_do) )
	309
[2007]	310	SELECT CASE ( trimvar )
[1]	311
	312	CASE ( 'e' )
	313	IF ( av == 0 ) THEN
	314	to_be_resorted => e
	315	ELSE
	316	to_be_resorted => e_av
	317	ENDIF
	318
[771]	319	CASE ( 'lpt' )
	320	IF ( av == 0 ) THEN
	321	to_be_resorted => pt
	322	ELSE
	323	to_be_resorted => lpt_av
	324	ENDIF
	325
[1053]	326	CASE ( 'nr' )
	327	IF ( av == 0 ) THEN
	328	to_be_resorted => nr
	329	ELSE
	330	to_be_resorted => nr_av
	331	ENDIF
	332
[1]	333	CASE ( 'p' )
	334	IF ( av == 0 ) THEN
[727]	335	IF ( psolver /= 'sor' ) CALL exchange_horiz( p, nbgp )
[1]	336	to_be_resorted => p
	337	ELSE
[727]	338	IF ( psolver /= 'sor' ) CALL exchange_horiz( p_av, nbgp )
[1]	339	to_be_resorted => p_av
	340	ENDIF
	341
	342	CASE ( 'pc' ) ! particle concentration (requires ghostpoint exchange)
	343	IF ( av == 0 ) THEN
[1359]	344	IF ( simulated_time >= particle_advection_start ) THEN
	345	tend = prt_count
	346	CALL exchange_horiz( tend, nbgp )
	347	ELSE
	348	tend = 0.0_wp
	349	ENDIF
[667]	350	DO i = nxlg, nxrg
	351	DO j = nysg, nyng
[1551]	352	DO k = nzb_do, nzt_do
[1]	353	local_pf(i,j,k) = tend(k,j,i)
	354	ENDDO
	355	ENDDO
	356	ENDDO
	357	resorted = .TRUE.
	358	ELSE
[667]	359	CALL exchange_horiz( pc_av, nbgp )
[1]	360	to_be_resorted => pc_av
	361	ENDIF
	362
[1359]	363	CASE ( 'pr' ) ! mean particle radius (effective radius)
[1]	364	IF ( av == 0 ) THEN
[1359]	365	IF ( simulated_time >= particle_advection_start ) THEN
	366	DO i = nxl, nxr
	367	DO j = nys, nyn
[1551]	368	DO k = nzb_do, nzt_do
[1359]	369	number_of_particles = prt_count(k,j,i)
	370	IF (number_of_particles <= 0) CYCLE
	371	particles => grid_particles(k,j,i)%particles(1:number_of_particles)
	372	s_r2 = 0.0_wp
	373	s_r3 = 0.0_wp
	374	DO n = 1, number_of_particles
	375	IF ( particles(n)%particle_mask ) THEN
	376	s_r2 = s_r2 + particles(n)%radius*2 &
	377	particles(n)%weight_factor
	378	s_r3 = s_r3 + particles(n)%radius*3 &
	379	particles(n)%weight_factor
	380	ENDIF
	381	ENDDO
	382	IF ( s_r2 > 0.0_wp ) THEN
	383	mean_r = s_r3 / s_r2
	384	ELSE
	385	mean_r = 0.0_wp
	386	ENDIF
	387	tend(k,j,i) = mean_r
[1]	388	ENDDO
	389	ENDDO
	390	ENDDO
[1359]	391	CALL exchange_horiz( tend, nbgp )
	392	ELSE
	393	tend = 0.0_wp
	394	ENDIF
[667]	395	DO i = nxlg, nxrg
	396	DO j = nysg, nyng
[1551]	397	DO k = nzb_do, nzt_do
[1]	398	local_pf(i,j,k) = tend(k,j,i)
	399	ENDDO
	400	ENDDO
	401	ENDDO
	402	resorted = .TRUE.
	403	ELSE
[667]	404	CALL exchange_horiz( pr_av, nbgp )
[1]	405	to_be_resorted => pr_av
	406	ENDIF
	407
[1053]	408	CASE ( 'prr' )
	409	IF ( av == 0 ) THEN
	410	CALL exchange_horiz( prr, nbgp )
	411	DO i = nxlg, nxrg
	412	DO j = nysg, nyng
[1822]	413	DO k = nzb_do, nzt_do
[1053]	414	local_pf(i,j,k) = prr(k,j,i)
	415	ENDDO
	416	ENDDO
	417	ENDDO
	418	ELSE
	419	CALL exchange_horiz( prr_av, nbgp )
	420	DO i = nxlg, nxrg
	421	DO j = nysg, nyng
[1822]	422	DO k = nzb_do, nzt_do
[1053]	423	local_pf(i,j,k) = prr_av(k,j,i)
	424	ENDDO
	425	ENDDO
	426	ENDDO
	427	ENDIF
	428	resorted = .TRUE.
	429
[1]	430	CASE ( 'pt' )
	431	IF ( av == 0 ) THEN
	432	IF ( .NOT. cloud_physics ) THEN
	433	to_be_resorted => pt
	434	ELSE
[667]	435	DO i = nxlg, nxrg
	436	DO j = nysg, nyng
[1551]	437	DO k = nzb_do, nzt_do
[1320]	438	local_pf(i,j,k) = pt(k,j,i) + l_d_cp * &
	439	pt_d_t(k) * &
[1]	440	ql(k,j,i)
	441	ENDDO
	442	ENDDO
	443	ENDDO
	444	resorted = .TRUE.
	445	ENDIF
	446	ELSE
	447	to_be_resorted => pt_av
	448	ENDIF
	449
	450	CASE ( 'q' )
	451	IF ( av == 0 ) THEN
	452	to_be_resorted => q
	453	ELSE
	454	to_be_resorted => q_av
	455	ENDIF
[691]	456
[1053]	457	CASE ( 'qc' )
[1]	458	IF ( av == 0 ) THEN
[1115]	459	to_be_resorted => qc
[1]	460	ELSE
[1115]	461	to_be_resorted => qc_av
[1]	462	ENDIF
	463
[1053]	464	CASE ( 'ql' )
	465	IF ( av == 0 ) THEN
[1115]	466	to_be_resorted => ql
[1053]	467	ELSE
[1115]	468	to_be_resorted => ql_av
[1053]	469	ENDIF
	470
[1]	471	CASE ( 'ql_c' )
	472	IF ( av == 0 ) THEN
	473	to_be_resorted => ql_c
	474	ELSE
	475	to_be_resorted => ql_c_av
	476	ENDIF
	477
	478	CASE ( 'ql_v' )
	479	IF ( av == 0 ) THEN
	480	to_be_resorted => ql_v
	481	ELSE
	482	to_be_resorted => ql_v_av
	483	ENDIF
	484
	485	CASE ( 'ql_vp' )
	486	IF ( av == 0 ) THEN
[1359]	487	IF ( simulated_time >= particle_advection_start ) THEN
	488	DO i = nxl, nxr
	489	DO j = nys, nyn
[1551]	490	DO k = nzb_do, nzt_do
[1359]	491	number_of_particles = prt_count(k,j,i)
	492	IF (number_of_particles <= 0) CYCLE
	493	particles => grid_particles(k,j,i)%particles(1:number_of_particles)
	494	DO n = 1, number_of_particles
	495	IF ( particles(n)%particle_mask ) THEN
	496	tend(k,j,i) = tend(k,j,i) + &
	497	particles(n)%weight_factor / &
	498	prt_count(k,j,i)
	499	ENDIF
	500	ENDDO
[1007]	501	ENDDO
	502	ENDDO
	503	ENDDO
[1359]	504	CALL exchange_horiz( tend, nbgp )
	505	ELSE
	506	tend = 0.0_wp
	507	ENDIF
[1007]	508	DO i = nxlg, nxrg
	509	DO j = nysg, nyng
[1551]	510	DO k = nzb_do, nzt_do
[1007]	511	local_pf(i,j,k) = tend(k,j,i)
	512	ENDDO
	513	ENDDO
	514	ENDDO
	515	resorted = .TRUE.
[1]	516	ELSE
[1007]	517	CALL exchange_horiz( ql_vp_av, nbgp )
[1]	518	to_be_resorted => ql_vp_av
	519	ENDIF
	520
[1053]	521	CASE ( 'qr' )
	522	IF ( av == 0 ) THEN
	523	to_be_resorted => qr
	524	ELSE
	525	to_be_resorted => qr_av
	526	ENDIF
	527
[1]	528	CASE ( 'qv' )
	529	IF ( av == 0 ) THEN
[667]	530	DO i = nxlg, nxrg
	531	DO j = nysg, nyng
[1551]	532	DO k = nzb_do, nzt_do
[1]	533	local_pf(i,j,k) = q(k,j,i) - ql(k,j,i)
	534	ENDDO
	535	ENDDO
	536	ENDDO
	537	resorted = .TRUE.
	538	ELSE
	539	to_be_resorted => qv_av
	540	ENDIF
	541
[2031]	542	CASE ( 'rho_ocean' )
[96]	543	IF ( av == 0 ) THEN
[2031]	544	to_be_resorted => rho_ocean
[96]	545	ELSE
[2031]	546	to_be_resorted => rho_ocean_av
[96]	547	ENDIF
[691]	548
[1]	549	CASE ( 's' )
	550	IF ( av == 0 ) THEN
[1960]	551	to_be_resorted => s
[1]	552	ELSE
[355]	553	to_be_resorted => s_av
[1]	554	ENDIF
[691]	555
[96]	556	CASE ( 'sa' )
	557	IF ( av == 0 ) THEN
	558	to_be_resorted => sa
	559	ELSE
	560	to_be_resorted => sa_av
	561	ENDIF
[691]	562
[1]	563	CASE ( 'u' )
	564	IF ( av == 0 ) THEN
	565	to_be_resorted => u
	566	ELSE
	567	to_be_resorted => u_av
	568	ENDIF
	569
	570	CASE ( 'v' )
	571	IF ( av == 0 ) THEN
	572	to_be_resorted => v
	573	ELSE
	574	to_be_resorted => v_av
	575	ENDIF
	576
	577	CASE ( 'vpt' )
	578	IF ( av == 0 ) THEN
	579	to_be_resorted => vpt
	580	ELSE
	581	to_be_resorted => vpt_av
	582	ENDIF
	583
	584	CASE ( 'w' )
	585	IF ( av == 0 ) THEN
	586	to_be_resorted => w
	587	ELSE
	588	to_be_resorted => w_av
	589	ENDIF
[2007]	590	!
	591	!-- Block of urban surface model outputs
	592	CASE ( 'usm_output' )
	593	CALL usm_data_output_3d( av, do3d(av,if), found, local_pf, &
	594	nzb_do, nzt_do )
[1]	595
	596	CASE DEFAULT
[1972]	597
[1]	598	!
[1972]	599	!-- Land surface quantity
	600	IF ( land_surface ) THEN
	601	!
	602	!-- For soil model quantities, it is required to re-allocate local_pf
	603	nzb_do = nzb_soil
	604	nzt_do = nzt_soil
	605
	606	DEALLOCATE ( local_pf )
	607	ALLOCATE( local_pf(nxlg:nxrg,nysg:nyng,nzb_do:nzt_do) )
	608
	609	CALL lsm_data_output_3d( av, do3d(av,if), found, local_pf )
	610	resorted = .TRUE.
[1976]	611
	612	!
	613	!-- If no soil model variable was found, re-allocate local_pf
	614	IF ( .NOT. found ) THEN
	615	nzb_do = nzb
	616	nzt_do = nz_do3d
	617
	618	DEALLOCATE ( local_pf )
	619	ALLOCATE( local_pf(nxlg:nxrg,nysg:nyng,nzb_do:nzt_do) )
	620	ENDIF
	621
[1972]	622	ENDIF
	623
	624	!
[1976]	625	!-- Radiation quantity
	626	IF ( .NOT. found .AND. radiation ) THEN
	627	CALL radiation_data_output_3d( av, do3d(av,if), found, &
	628	local_pf )
	629	resorted = .TRUE.
	630	ENDIF
	631
	632	!
[2209]	633	!-- Plant canopy model output
	634	IF ( .NOT. found .AND. plant_canopy ) THEN
	635	CALL pcm_data_output_3d( av, do3d(av,if), found, &
	636	local_pf )
	637	resorted = .TRUE.
	638	ENDIF
	639
	640	!
[1]	641	!-- User defined quantity
[1972]	642	IF ( .NOT. found ) THEN
	643	CALL user_data_output_3d( av, do3d(av,if), found, local_pf, &
	644	nzb_do, nzt_do )
	645	resorted = .TRUE.
	646	ENDIF
[1]	647
[254]	648	IF ( .NOT. found ) THEN
[1320]	649	message_string = 'no output available for: ' // &
[274]	650	TRIM( do3d(av,if) )
[254]	651	CALL message( 'data_output_3d', 'PA0182', 0, 0, 0, 6, 0 )
[1]	652	ENDIF
	653
	654	END SELECT
	655
	656	!
	657	!-- Resort the array to be output, if not done above
	658	IF ( .NOT. resorted ) THEN
[667]	659	DO i = nxlg, nxrg
	660	DO j = nysg, nyng
[1551]	661	DO k = nzb_do, nzt_do
[1]	662	local_pf(i,j,k) = to_be_resorted(k,j,i)
	663	ENDDO
	664	ENDDO
	665	ENDDO
	666	ENDIF
	667
	668	!
[1327]	669	!-- Output of the 3D-array
	670	#if defined( __parallel )
	671	IF ( netcdf_data_format < 5 ) THEN
[1]	672	!
[1327]	673	!-- Non-parallel netCDF output. Data is output in parallel in
	674	!-- FORTRAN binary format here, and later collected into one file by
	675	!-- combine_plot_fields
	676	IF ( myid == 0 ) THEN
	677	WRITE ( 30 ) time_since_reference_point, &
	678	do3d_time_count(av), av
[1]	679	ENDIF
[1327]	680	DO i = 0, io_blocks-1
	681	IF ( i == io_group ) THEN
[1551]	682	WRITE ( 30 ) nxlg, nxrg, nysg, nyng, nzb_do, nzt_do
	683	WRITE ( 30 ) local_pf(:,:,nzb_do:nzt_do)
[1327]	684	ENDIF
[1972]	685
[1327]	686	CALL MPI_BARRIER( comm2d, ierr )
[1972]	687
[1327]	688	ENDDO
[559]	689
[1327]	690	ELSE
[646]	691	#if defined( __netcdf )
[493]	692	!
[1327]	693	!-- Parallel output in netCDF4/HDF5 format.
	694	!-- Do not output redundant ghost point data except for the
	695	!-- boundaries of the total domain.
	696	IF ( nxr == nx .AND. nyn /= ny ) THEN
	697	nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,if), &
[1551]	698	local_pf(nxl:nxr+1,nys:nyn,nzb_do:nzt_do), &
	699	start = (/ nxl+1, nys+1, nzb_do+1, do3d_time_count(av) /), &
	700	count = (/ nxr-nxl+2, nyn-nys+1, nzt_do-nzb_do+1, 1 /) )
[1327]	701	ELSEIF ( nxr /= nx .AND. nyn == ny ) THEN
	702	nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,if), &
[1551]	703	local_pf(nxl:nxr,nys:nyn+1,nzb_do:nzt_do), &
	704	start = (/ nxl+1, nys+1, nzb_do+1, do3d_time_count(av) /), &
	705	count = (/ nxr-nxl+1, nyn-nys+2, nzt_do-nzb_do+1, 1 /) )
[1327]	706	ELSEIF ( nxr == nx .AND. nyn == ny ) THEN
	707	nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,if), &
[1551]	708	local_pf(nxl:nxr+1,nys:nyn+1,nzb_do:nzt_do ), &
	709	start = (/ nxl+1, nys+1, nzb_do+1, do3d_time_count(av) /), &
	710	count = (/ nxr-nxl+2, nyn-nys+2, nzt_do-nzb_do+1, 1 /) )
[1327]	711	ELSE
	712	nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,if), &
[1551]	713	local_pf(nxl:nxr,nys:nyn,nzb_do:nzt_do), &
	714	start = (/ nxl+1, nys+1, nzb_do+1, do3d_time_count(av) /), &
	715	count = (/ nxr-nxl+1, nyn-nys+1, nzt_do-nzb_do+1, 1 /) )
[1327]	716	ENDIF
[1783]	717	CALL netcdf_handle_error( 'data_output_3d', 386 )
[646]	718	#endif
[1327]	719	ENDIF
[1]	720	#else
	721	#if defined( __netcdf )
[1327]	722	nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,if), &
[1551]	723	local_pf(nxl:nxr+1,nys:nyn+1,nzb_do:nzt_do), &
[1327]	724	start = (/ 1, 1, 1, do3d_time_count(av) /), &
[1551]	725	count = (/ nx+2, ny+2, nzt_do-nzb_do+1, 1 /) )
[1783]	726	CALL netcdf_handle_error( 'data_output_3d', 446 )
[1]	727	#endif
	728	#endif
	729
	730	if = if + 1
	731
	732	!
[1551]	733	!-- Deallocate temporary array
	734	DEALLOCATE ( local_pf )
[1]	735
[1551]	736	ENDDO
[1]	737
[1318]	738	CALL cpu_log( log_point(14), 'data_output_3d', 'stop' )
[1]	739
	740	!
	741	!-- Formats.
[1320]	742	3300 FORMAT ('variable ',I4,' file=',A,' filetype=unformatted skip=',I12/ &
[1]	743	'label = ',A,A)
	744
	745	END SUBROUTINE data_output_3d

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