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source: palm/trunk/SOURCE/data_output_3d.f90 @ 1752

Last change on this file since 1752 was 1746, checked in by gronemeier, 9 years ago
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[1682]	1	!> @file data_output_3d.f90
[1036]	2	!--------------------------------------------------------------------------------!
	3	! This file is part of PALM.
	4	!
	5	! PALM is free software: you can redistribute it and/or modify it under the terms
	6	! of the GNU General Public License as published by the Free Software Foundation,
	7	! either version 3 of the License, or (at your option) any later version.
	8	!
	9	! PALM is distributed in the hope that it will be useful, but WITHOUT ANY
	10	! WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR
	11	! A PARTICULAR PURPOSE. See the GNU General Public License for more details.
	12	!
	13	! You should have received a copy of the GNU General Public License along with
	14	! PALM. If not, see <http://www.gnu.org/licenses/>.
	15	!
[1691]	16	! Copyright 1997-2015 Leibniz Universitaet Hannover
[1036]	17	!--------------------------------------------------------------------------------!
	18	!
[254]	19	! Current revisions:
[1106]	20	! ------------------
[1552]	21	!
[1746]	22	!
[1552]	23	! Former revisions:
	24	! -----------------
	25	! $Id: data_output_3d.f90 1746 2016-02-05 13:19:50Z maronga $
	26	!
[1746]	27	! 1745 2016-02-05 13:06:51Z gronemeier
	28	! Bugfix: test if time axis limit exceeds moved to point after call of check_open
	29	!
[1692]	30	! 1691 2015-10-26 16:17:44Z maronga
	31	! Added output of radiative heating rates for RRTMG
	32	!
[1683]	33	! 1682 2015-10-07 23:56:08Z knoop
	34	! Code annotations made doxygen readable
	35	!
[1586]	36	! 1585 2015-04-30 07:05:52Z maronga
	37	! Added support for RRTMG
	38	!
[1552]	39	! 1551 2015-03-03 14:18:16Z maronga
[1551]	40	! Added suppport for land surface model and radiation model output. In the course
	41	! of this action, the limits for vertical loops have been changed (from nzb and
	42	! nzt+1 to nzb_do and nzt_do, respectively in order to allow soil model output).
	43	! Moreover, a new vertical grid zs was introduced.
[1329]	44	!
[1360]	45	! 1359 2014-04-11 17:15:14Z hoffmann
	46	! New particle structure integrated.
	47	!
[1354]	48	! 1353 2014-04-08 15:21:23Z heinze
	49	! REAL constants provided with KIND-attribute
	50	!
[1329]	51	! 1327 2014-03-21 11:00:16Z raasch
	52	! parts concerning avs output removed,
	53	! -netcdf output queries
	54	!
[1321]	55	! 1320 2014-03-20 08:40:49Z raasch
[1320]	56	! ONLY-attribute added to USE-statements,
	57	! kind-parameters added to all INTEGER and REAL declaration statements,
	58	! kinds are defined in new module kinds,
	59	! old module precision_kind is removed,
	60	! revision history before 2012 removed,
	61	! comment fields (!:) to be used for variable explanations added to
	62	! all variable declaration statements
[674]	63	!
[1319]	64	! 1318 2014-03-17 13:35:16Z raasch
	65	! barrier argument removed from cpu_log,
	66	! module interfaces removed
	67	!
[1309]	68	! 1308 2014-03-13 14:58:42Z fricke
	69	! Check, if the limit of the time dimension is exceeded for parallel output
	70	! To increase the performance for parallel output, the following is done:
	71	! - Update of time axis is only done by PE0
	72	!
[1245]	73	! 1244 2013-10-31 08:16:56Z raasch
	74	! Bugfix for index bounds in case of 3d-parallel output
	75	!
[1116]	76	! 1115 2013-03-26 18:16:16Z hoffmann
	77	! ql is calculated by calc_liquid_water_content
	78	!
[1107]	79	! 1106 2013-03-04 05:31:38Z raasch
	80	! array_kind renamed precision_kind
	81	!
[1077]	82	! 1076 2012-12-05 08:30:18Z hoffmann
	83	! Bugfix in output of ql
	84	!
[1054]	85	! 1053 2012-11-13 17:11:03Z hoffmann
	86	! +nr, qr, prr, qc and averaged quantities
	87	!
[1037]	88	! 1036 2012-10-22 13:43:42Z raasch
	89	! code put under GPL (PALM 3.9)
	90	!
[1035]	91	! 1031 2012-10-19 14:35:30Z raasch
	92	! netCDF4 without parallel file support implemented
	93	!
[1008]	94	! 1007 2012-09-19 14:30:36Z franke
	95	! Bugfix: missing calculation of ql_vp added
	96	!
[1]	97	! Revision 1.1 1997/09/03 06:29:36 raasch
	98	! Initial revision
	99	!
	100	!
	101	! Description:
	102	! ------------
[1682]	103	!> Output of the 3D-arrays in netCDF and/or AVS format.
[1]	104	!------------------------------------------------------------------------------!
[1682]	105	SUBROUTINE data_output_3d( av )
	106
[1]	107
[1320]	108	USE arrays_3d, &
	109	ONLY: e, nr, p, pt, q, qc, ql, ql_c, ql_v, qr, rho, sa, tend, u, v, &
	110	vpt, w
	111
[1]	112	USE averaging
[1320]	113
	114	USE cloud_parameters, &
	115	ONLY: l_d_cp, prr, pt_d_t
	116
	117	USE control_parameters, &
[1327]	118	ONLY: avs_data_file, cloud_physics, do3d, do3d_avs_n, &
	119	do3d_no, do3d_time_count, io_blocks, io_group, &
	120	message_string, netcdf_data_format, ntdim_3d, &
[1320]	121	nz_do3d, plot_3d_precision, psolver, simulated_time, &
	122	simulated_time_chr, skip_do_avs, time_since_reference_point
	123
	124	USE cpulog, &
	125	ONLY: log_point, cpu_log
	126
	127	USE indices, &
	128	ONLY: nbgp, nx, nxl, nxlg, nxr, nxrg, ny, nyn, nyng, nys, nysg, nzt, &
	129	nzb
	130
	131	USE kinds
	132
[1551]	133	USE land_surface_model_mod, &
	134	ONLY: m_soil, m_soil_av, nzb_soil, nzt_soil, t_soil, t_soil_av
	135
[1]	136	USE netcdf_control
[1320]	137
	138	USE particle_attributes, &
[1359]	139	ONLY: grid_particles, number_of_particles, particles, &
	140	particle_advection_start, prt_count
[1320]	141
[1]	142	USE pegrid
	143
[1585]	144	USE radiation_model_mod, &
	145	ONLY: rad_lw_in, rad_lw_in_av, rad_lw_out, rad_lw_out_av, &
[1691]	146	rad_lw_cs_hr, rad_lw_cs_hr_av, rad_lw_hr, rad_lw_hr_av, &
	147	rad_sw_in, rad_sw_in_av, rad_sw_out, rad_sw_out_av, &
	148	rad_sw_cs_hr, rad_sw_cs_hr_av, rad_sw_hr, rad_sw_hr_av
[1585]	149
	150
[1]	151	IMPLICIT NONE
	152
[1682]	153	CHARACTER (LEN=9) :: simulated_time_mod !<
[1]	154
[1682]	155	INTEGER(iwp) :: av !<
	156	INTEGER(iwp) :: i !<
	157	INTEGER(iwp) :: if !<
	158	INTEGER(iwp) :: j !<
	159	INTEGER(iwp) :: k !<
	160	INTEGER(iwp) :: n !<
	161	INTEGER(iwp) :: nzb_do !< vertical lower limit for data output
	162	INTEGER(iwp) :: nzt_do !< vertical upper limit for data output
	163	INTEGER(iwp) :: pos !<
	164	INTEGER(iwp) :: prec !<
	165	INTEGER(iwp) :: psi !<
[1]	166
[1682]	167	LOGICAL :: found !<
	168	LOGICAL :: resorted !<
[1]	169
[1682]	170	REAL(wp) :: mean_r !<
	171	REAL(wp) :: s_r2 !<
	172	REAL(wp) :: s_r3 !<
[1]	173
[1682]	174	REAL(sp), DIMENSION(:,:,:), ALLOCATABLE :: local_pf !<
[1]	175
[1682]	176	REAL(wp), DIMENSION(:,:,:), POINTER :: to_be_resorted !<
[1]	177
	178	!
	179	!-- Return, if nothing to output
	180	IF ( do3d_no(av) == 0 ) RETURN
	181
	182	CALL cpu_log (log_point(14),'data_output_3d','start')
	183
	184	!
	185	!-- Open output file.
	186	!-- Also creates coordinate and fld-file for AVS.
[1031]	187	!-- For classic or 64bit netCDF output or output of other (old) data formats,
[493]	188	!-- for a run on more than one PE, each PE opens its own file and
[1]	189	!-- writes the data of its subdomain in binary format (regardless of the format
	190	!-- the user has requested). After the run, these files are combined to one
	191	!-- file by combine_plot_fields in the format requested by the user (netcdf
[493]	192	!-- and/or avs).
[1031]	193	!-- For netCDF4/HDF5 output, data is written in parallel into one file.
[1327]	194	IF ( netcdf_data_format < 5 ) THEN
	195	CALL check_open( 30 )
	196	IF ( myid == 0 ) CALL check_open( 106+av*10 )
[493]	197	ELSE
[1327]	198	CALL check_open( 106+av*10 )
[493]	199	ENDIF
[1]	200
	201	!
[1745]	202	!-- For parallel netcdf output the time axis must be limited. Return, if this
	203	!-- limit is exceeded. This could be the case, if the simulated time exceeds
	204	!-- the given end time by the length of the given output interval.
	205	IF ( netcdf_data_format > 4 ) THEN
	206	IF ( do3d_time_count(av) + 1 > ntdim_3d(av) ) THEN
	207	WRITE ( message_string, * ) 'Output of 3d data is not given at t=', &
	208	simulated_time, '&because the maximum ', &
	209	'number of output time levels is ', &
	210	'exceeded.'
	211	CALL message( 'data_output_3d', 'PA0387', 0, 1, 0, 6, 0 )
	212	CALL cpu_log( log_point(14), 'data_output_3d', 'stop' )
	213	RETURN
	214	ENDIF
	215	ENDIF
	216	WRITE(9,*) '___hier4'
	217	CALL local_flush(9)
	218
	219	!
[1031]	220	!-- Update the netCDF time axis
[1308]	221	!-- In case of parallel output, this is only done by PE0 to increase the
	222	!-- performance.
[1]	223	#if defined( __netcdf )
[1308]	224	do3d_time_count(av) = do3d_time_count(av) + 1
	225	IF ( myid == 0 ) THEN
[1327]	226	nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_time_3d(av), &
	227	(/ time_since_reference_point /), &
	228	start = (/ do3d_time_count(av) /), &
	229	count = (/ 1 /) )
	230	CALL handle_netcdf_error( 'data_output_3d', 376 )
[1]	231	ENDIF
	232	#endif
	233
	234	!
	235	!-- Loop over all variables to be written.
	236	if = 1
	237
	238	DO WHILE ( do3d(av,if)(1:1) /= ' ' )
	239	!
	240	!-- Store the array chosen on the temporary array.
	241	resorted = .FALSE.
[1551]	242	nzb_do = nzb
	243	nzt_do = nz_do3d
	244
	245	!
	246	!-- Allocate a temporary array with the desired output dimensions.
	247	ALLOCATE( local_pf(nxlg:nxrg,nysg:nyng,nzb_do:nzt_do) )
	248
[1]	249	SELECT CASE ( TRIM( do3d(av,if) ) )
	250
	251	CASE ( 'e' )
	252	IF ( av == 0 ) THEN
	253	to_be_resorted => e
	254	ELSE
	255	to_be_resorted => e_av
	256	ENDIF
	257
[771]	258	CASE ( 'lpt' )
	259	IF ( av == 0 ) THEN
	260	to_be_resorted => pt
	261	ELSE
	262	to_be_resorted => lpt_av
	263	ENDIF
	264
[1551]	265	CASE ( 'm_soil' )
	266	nzb_do = nzb_soil
	267	nzt_do = nzt_soil
	268	!
	269	!-- For soil model quantities, it is required to re-allocate local_pf
	270	DEALLOCATE ( local_pf )
	271	ALLOCATE( local_pf(nxlg:nxrg,nysg:nyng,nzb_do:nzt_do) )
	272
	273	IF ( av == 0 ) THEN
	274	to_be_resorted => m_soil
	275	ELSE
	276	to_be_resorted => m_soil_av
	277	ENDIF
	278
[1053]	279	CASE ( 'nr' )
	280	IF ( av == 0 ) THEN
	281	to_be_resorted => nr
	282	ELSE
	283	to_be_resorted => nr_av
	284	ENDIF
	285
[1]	286	CASE ( 'p' )
	287	IF ( av == 0 ) THEN
[727]	288	IF ( psolver /= 'sor' ) CALL exchange_horiz( p, nbgp )
[1]	289	to_be_resorted => p
	290	ELSE
[727]	291	IF ( psolver /= 'sor' ) CALL exchange_horiz( p_av, nbgp )
[1]	292	to_be_resorted => p_av
	293	ENDIF
	294
	295	CASE ( 'pc' ) ! particle concentration (requires ghostpoint exchange)
	296	IF ( av == 0 ) THEN
[1359]	297	IF ( simulated_time >= particle_advection_start ) THEN
	298	tend = prt_count
	299	CALL exchange_horiz( tend, nbgp )
	300	ELSE
	301	tend = 0.0_wp
	302	ENDIF
[667]	303	DO i = nxlg, nxrg
	304	DO j = nysg, nyng
[1551]	305	DO k = nzb_do, nzt_do
[1]	306	local_pf(i,j,k) = tend(k,j,i)
	307	ENDDO
	308	ENDDO
	309	ENDDO
	310	resorted = .TRUE.
	311	ELSE
[667]	312	CALL exchange_horiz( pc_av, nbgp )
[1]	313	to_be_resorted => pc_av
	314	ENDIF
	315
[1359]	316	CASE ( 'pr' ) ! mean particle radius (effective radius)
[1]	317	IF ( av == 0 ) THEN
[1359]	318	IF ( simulated_time >= particle_advection_start ) THEN
	319	DO i = nxl, nxr
	320	DO j = nys, nyn
[1551]	321	DO k = nzb_do, nzt_do
[1359]	322	number_of_particles = prt_count(k,j,i)
	323	IF (number_of_particles <= 0) CYCLE
	324	particles => grid_particles(k,j,i)%particles(1:number_of_particles)
	325	s_r2 = 0.0_wp
	326	s_r3 = 0.0_wp
	327	DO n = 1, number_of_particles
	328	IF ( particles(n)%particle_mask ) THEN
	329	s_r2 = s_r2 + particles(n)%radius*2 &
	330	particles(n)%weight_factor
	331	s_r3 = s_r3 + particles(n)%radius*3 &
	332	particles(n)%weight_factor
	333	ENDIF
	334	ENDDO
	335	IF ( s_r2 > 0.0_wp ) THEN
	336	mean_r = s_r3 / s_r2
	337	ELSE
	338	mean_r = 0.0_wp
	339	ENDIF
	340	tend(k,j,i) = mean_r
[1]	341	ENDDO
	342	ENDDO
	343	ENDDO
[1359]	344	CALL exchange_horiz( tend, nbgp )
	345	ELSE
	346	tend = 0.0_wp
	347	ENDIF
[667]	348	DO i = nxlg, nxrg
	349	DO j = nysg, nyng
[1551]	350	DO k = nzb_do, nzt_do
[1]	351	local_pf(i,j,k) = tend(k,j,i)
	352	ENDDO
	353	ENDDO
	354	ENDDO
	355	resorted = .TRUE.
	356	ELSE
[667]	357	CALL exchange_horiz( pr_av, nbgp )
[1]	358	to_be_resorted => pr_av
	359	ENDIF
	360
[1053]	361	CASE ( 'prr' )
	362	IF ( av == 0 ) THEN
	363	CALL exchange_horiz( prr, nbgp )
	364	DO i = nxlg, nxrg
	365	DO j = nysg, nyng
	366	DO k = nzb, nzt+1
	367	local_pf(i,j,k) = prr(k,j,i)
	368	ENDDO
	369	ENDDO
	370	ENDDO
	371	ELSE
	372	CALL exchange_horiz( prr_av, nbgp )
	373	DO i = nxlg, nxrg
	374	DO j = nysg, nyng
	375	DO k = nzb, nzt+1
	376	local_pf(i,j,k) = prr_av(k,j,i)
	377	ENDDO
	378	ENDDO
	379	ENDDO
	380	ENDIF
	381	resorted = .TRUE.
	382
[1]	383	CASE ( 'pt' )
	384	IF ( av == 0 ) THEN
	385	IF ( .NOT. cloud_physics ) THEN
	386	to_be_resorted => pt
	387	ELSE
[667]	388	DO i = nxlg, nxrg
	389	DO j = nysg, nyng
[1551]	390	DO k = nzb_do, nzt_do
[1320]	391	local_pf(i,j,k) = pt(k,j,i) + l_d_cp * &
	392	pt_d_t(k) * &
[1]	393	ql(k,j,i)
	394	ENDDO
	395	ENDDO
	396	ENDDO
	397	resorted = .TRUE.
	398	ENDIF
	399	ELSE
	400	to_be_resorted => pt_av
	401	ENDIF
	402
	403	CASE ( 'q' )
	404	IF ( av == 0 ) THEN
	405	to_be_resorted => q
	406	ELSE
	407	to_be_resorted => q_av
	408	ENDIF
[691]	409
[1053]	410	CASE ( 'qc' )
[1]	411	IF ( av == 0 ) THEN
[1115]	412	to_be_resorted => qc
[1]	413	ELSE
[1115]	414	to_be_resorted => qc_av
[1]	415	ENDIF
	416
[1053]	417	CASE ( 'ql' )
	418	IF ( av == 0 ) THEN
[1115]	419	to_be_resorted => ql
[1053]	420	ELSE
[1115]	421	to_be_resorted => ql_av
[1053]	422	ENDIF
	423
[1]	424	CASE ( 'ql_c' )
	425	IF ( av == 0 ) THEN
	426	to_be_resorted => ql_c
	427	ELSE
	428	to_be_resorted => ql_c_av
	429	ENDIF
	430
	431	CASE ( 'ql_v' )
	432	IF ( av == 0 ) THEN
	433	to_be_resorted => ql_v
	434	ELSE
	435	to_be_resorted => ql_v_av
	436	ENDIF
	437
	438	CASE ( 'ql_vp' )
	439	IF ( av == 0 ) THEN
[1359]	440	IF ( simulated_time >= particle_advection_start ) THEN
	441	DO i = nxl, nxr
	442	DO j = nys, nyn
[1551]	443	DO k = nzb_do, nzt_do
[1359]	444	number_of_particles = prt_count(k,j,i)
	445	IF (number_of_particles <= 0) CYCLE
	446	particles => grid_particles(k,j,i)%particles(1:number_of_particles)
	447	DO n = 1, number_of_particles
	448	IF ( particles(n)%particle_mask ) THEN
	449	tend(k,j,i) = tend(k,j,i) + &
	450	particles(n)%weight_factor / &
	451	prt_count(k,j,i)
	452	ENDIF
	453	ENDDO
[1007]	454	ENDDO
	455	ENDDO
	456	ENDDO
[1359]	457	CALL exchange_horiz( tend, nbgp )
	458	ELSE
	459	tend = 0.0_wp
	460	ENDIF
[1007]	461	DO i = nxlg, nxrg
	462	DO j = nysg, nyng
[1551]	463	DO k = nzb_do, nzt_do
[1007]	464	local_pf(i,j,k) = tend(k,j,i)
	465	ENDDO
	466	ENDDO
	467	ENDDO
	468	resorted = .TRUE.
[1]	469	ELSE
[1007]	470	CALL exchange_horiz( ql_vp_av, nbgp )
[1]	471	to_be_resorted => ql_vp_av
	472	ENDIF
	473
[1053]	474	CASE ( 'qr' )
	475	IF ( av == 0 ) THEN
	476	to_be_resorted => qr
	477	ELSE
	478	to_be_resorted => qr_av
	479	ENDIF
	480
[1]	481	CASE ( 'qv' )
	482	IF ( av == 0 ) THEN
[667]	483	DO i = nxlg, nxrg
	484	DO j = nysg, nyng
[1551]	485	DO k = nzb_do, nzt_do
[1]	486	local_pf(i,j,k) = q(k,j,i) - ql(k,j,i)
	487	ENDDO
	488	ENDDO
	489	ENDDO
	490	resorted = .TRUE.
	491	ELSE
	492	to_be_resorted => qv_av
	493	ENDIF
	494
[1585]	495	CASE ( 'rad_sw_in' )
	496	IF ( av == 0 ) THEN
	497	to_be_resorted => rad_sw_in
	498	ELSE
	499	to_be_resorted => rad_sw_in_av
	500	ENDIF
	501
	502	CASE ( 'rad_sw_out' )
	503	IF ( av == 0 ) THEN
	504	to_be_resorted => rad_sw_out
	505	ELSE
	506	to_be_resorted => rad_sw_out_av
	507	ENDIF
	508
[1691]	509	CASE ( 'rad_sw_cs_hr' )
	510	IF ( av == 0 ) THEN
	511	to_be_resorted => rad_sw_cs_hr
	512	ELSE
	513	to_be_resorted => rad_sw_cs_hr_av
	514	ENDIF
	515
	516	CASE ( 'rad_sw_hr' )
	517	IF ( av == 0 ) THEN
	518	to_be_resorted => rad_sw_hr
	519	ELSE
	520	to_be_resorted => rad_sw_hr_av
	521	ENDIF
	522
[1585]	523	CASE ( 'rad_lw_in' )
	524	IF ( av == 0 ) THEN
	525	to_be_resorted => rad_lw_in
	526	ELSE
	527	to_be_resorted => rad_lw_in_av
	528	ENDIF
	529
	530	CASE ( 'rad_lw_out' )
	531	IF ( av == 0 ) THEN
	532	to_be_resorted => rad_lw_out
	533	ELSE
	534	to_be_resorted => rad_lw_out_av
	535	ENDIF
	536
[1691]	537	CASE ( 'rad_lw_cs_hr' )
	538	IF ( av == 0 ) THEN
	539	to_be_resorted => rad_lw_cs_hr
	540	ELSE
	541	to_be_resorted => rad_lw_cs_hr_av
	542	ENDIF
	543
	544	CASE ( 'rad_lw_hr' )
	545	IF ( av == 0 ) THEN
	546	to_be_resorted => rad_lw_hr
	547	ELSE
	548	to_be_resorted => rad_lw_hr_av
	549	ENDIF
	550
[96]	551	CASE ( 'rho' )
	552	IF ( av == 0 ) THEN
	553	to_be_resorted => rho
	554	ELSE
	555	to_be_resorted => rho_av
	556	ENDIF
[691]	557
[1]	558	CASE ( 's' )
	559	IF ( av == 0 ) THEN
	560	to_be_resorted => q
	561	ELSE
[355]	562	to_be_resorted => s_av
[1]	563	ENDIF
[691]	564
[96]	565	CASE ( 'sa' )
	566	IF ( av == 0 ) THEN
	567	to_be_resorted => sa
	568	ELSE
	569	to_be_resorted => sa_av
	570	ENDIF
[691]	571
[1551]	572	CASE ( 't_soil' )
	573	nzb_do = nzb_soil
	574	nzt_do = nzt_soil
	575	!
	576	!-- For soil model quantities, it is required to re-allocate local_pf
	577	DEALLOCATE ( local_pf )
	578	ALLOCATE( local_pf(nxlg:nxrg,nysg:nyng,nzb_do:nzt_do) )
	579
	580	IF ( av == 0 ) THEN
	581	to_be_resorted => t_soil
	582	ELSE
	583	to_be_resorted => t_soil_av
	584	ENDIF
	585
[1]	586	CASE ( 'u' )
	587	IF ( av == 0 ) THEN
	588	to_be_resorted => u
	589	ELSE
	590	to_be_resorted => u_av
	591	ENDIF
	592
	593	CASE ( 'v' )
	594	IF ( av == 0 ) THEN
	595	to_be_resorted => v
	596	ELSE
	597	to_be_resorted => v_av
	598	ENDIF
	599
	600	CASE ( 'vpt' )
	601	IF ( av == 0 ) THEN
	602	to_be_resorted => vpt
	603	ELSE
	604	to_be_resorted => vpt_av
	605	ENDIF
	606
	607	CASE ( 'w' )
	608	IF ( av == 0 ) THEN
	609	to_be_resorted => w
	610	ELSE
	611	to_be_resorted => w_av
	612	ENDIF
	613
	614	CASE DEFAULT
	615	!
	616	!-- User defined quantity
[1320]	617	CALL user_data_output_3d( av, do3d(av,if), found, local_pf, &
[1551]	618	nzb_do, nzt_do )
[1]	619	resorted = .TRUE.
	620
[254]	621	IF ( .NOT. found ) THEN
[1320]	622	message_string = 'no output available for: ' // &
[274]	623	TRIM( do3d(av,if) )
[254]	624	CALL message( 'data_output_3d', 'PA0182', 0, 0, 0, 6, 0 )
[1]	625	ENDIF
	626
	627	END SELECT
	628
	629	!
	630	!-- Resort the array to be output, if not done above
	631	IF ( .NOT. resorted ) THEN
[667]	632	DO i = nxlg, nxrg
	633	DO j = nysg, nyng
[1551]	634	DO k = nzb_do, nzt_do
[1]	635	local_pf(i,j,k) = to_be_resorted(k,j,i)
	636	ENDDO
	637	ENDDO
	638	ENDDO
	639	ENDIF
	640
	641	!
[1327]	642	!-- Output of the 3D-array
	643	#if defined( __parallel )
	644	IF ( netcdf_data_format < 5 ) THEN
[1]	645	!
[1327]	646	!-- Non-parallel netCDF output. Data is output in parallel in
	647	!-- FORTRAN binary format here, and later collected into one file by
	648	!-- combine_plot_fields
	649	IF ( myid == 0 ) THEN
	650	WRITE ( 30 ) time_since_reference_point, &
	651	do3d_time_count(av), av
[1]	652	ENDIF
[1327]	653	DO i = 0, io_blocks-1
	654	IF ( i == io_group ) THEN
[1551]	655	WRITE ( 30 ) nxlg, nxrg, nysg, nyng, nzb_do, nzt_do
	656	WRITE ( 30 ) local_pf(:,:,nzb_do:nzt_do)
[1327]	657	ENDIF
[1]	658	#if defined( __parallel )
[1327]	659	CALL MPI_BARRIER( comm2d, ierr )
[759]	660	#endif
[1327]	661	ENDDO
[559]	662
[1327]	663	ELSE
[646]	664	#if defined( __netcdf )
[493]	665	!
[1327]	666	!-- Parallel output in netCDF4/HDF5 format.
	667	!-- Do not output redundant ghost point data except for the
	668	!-- boundaries of the total domain.
	669	IF ( nxr == nx .AND. nyn /= ny ) THEN
	670	nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,if), &
[1551]	671	local_pf(nxl:nxr+1,nys:nyn,nzb_do:nzt_do), &
	672	start = (/ nxl+1, nys+1, nzb_do+1, do3d_time_count(av) /), &
	673	count = (/ nxr-nxl+2, nyn-nys+1, nzt_do-nzb_do+1, 1 /) )
[1327]	674	ELSEIF ( nxr /= nx .AND. nyn == ny ) THEN
	675	nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,if), &
[1551]	676	local_pf(nxl:nxr,nys:nyn+1,nzb_do:nzt_do), &
	677	start = (/ nxl+1, nys+1, nzb_do+1, do3d_time_count(av) /), &
	678	count = (/ nxr-nxl+1, nyn-nys+2, nzt_do-nzb_do+1, 1 /) )
[1327]	679	ELSEIF ( nxr == nx .AND. nyn == ny ) THEN
	680	nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,if), &
[1551]	681	local_pf(nxl:nxr+1,nys:nyn+1,nzb_do:nzt_do ), &
	682	start = (/ nxl+1, nys+1, nzb_do+1, do3d_time_count(av) /), &
	683	count = (/ nxr-nxl+2, nyn-nys+2, nzt_do-nzb_do+1, 1 /) )
[1327]	684	ELSE
	685	nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,if), &
[1551]	686	local_pf(nxl:nxr,nys:nyn,nzb_do:nzt_do), &
	687	start = (/ nxl+1, nys+1, nzb_do+1, do3d_time_count(av) /), &
	688	count = (/ nxr-nxl+1, nyn-nys+1, nzt_do-nzb_do+1, 1 /) )
[1327]	689	ENDIF
	690	CALL handle_netcdf_error( 'data_output_3d', 386 )
[646]	691	#endif
[1327]	692	ENDIF
[1]	693	#else
	694	#if defined( __netcdf )
[1327]	695	nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,if), &
[1551]	696	local_pf(nxl:nxr+1,nys:nyn+1,nzb_do:nzt_do), &
[1327]	697	start = (/ 1, 1, 1, do3d_time_count(av) /), &
[1551]	698	count = (/ nx+2, ny+2, nzt_do-nzb_do+1, 1 /) )
[1327]	699	CALL handle_netcdf_error( 'data_output_3d', 446 )
[1]	700	#endif
	701	#endif
	702
	703	if = if + 1
	704
	705	!
[1551]	706	!-- Deallocate temporary array
	707	DEALLOCATE ( local_pf )
[1]	708
[1551]	709	ENDDO
[1]	710
[1318]	711	CALL cpu_log( log_point(14), 'data_output_3d', 'stop' )
[1]	712
	713	!
	714	!-- Formats.
[1320]	715	3300 FORMAT ('variable ',I4,' file=',A,' filetype=unformatted skip=',I12/ &
[1]	716	'label = ',A,A)
	717
	718	END SUBROUTINE data_output_3d

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