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source: palm/trunk/SCRIPTS/subjob @ 1090

Last change on this file since 1090 was 1090, checked in by raasch, 11 years ago
script adjustments for Kyushu-University computing center (lckyut)
Property svn:keywords set to `Id Rev`
File size: 47.6 KB

Line
1	#!/bin/ksh
2
3	# subjob - script for automatic generation and submission of batch-job files
4	# for various batch queuing systems
5
6	#--------------------------------------------------------------------------------#
7	# This file is part of PALM.
8	#
9	# PALM is free software: you can redistribute it and/or modify it under the terms
10	# of the GNU General Public License as published by the Free Software Foundation,
11	# either version 3 of the License, or (at your option) any later version.
12	#
13	# PALM is distributed in the hope that it will be useful, but WITHOUT ANY
14	# WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR
15	# A PARTICULAR PURPOSE. See the GNU General Public License for more details.
16	#
17	# You should have received a copy of the GNU General Public License along with
18	# PALM. If not, see <http://www.gnu.org/licenses/>.
19	#
20	# Copyright 1997-2012 Leibniz University Hannover
21	#--------------------------------------------------------------------------------#
22	#
23	# Current revisions:
24	# ------------------
25	# adjustments for Kyushu-University computing center (lckyut)
26	# old changelog messages removed
27	#
28	# Former revisions:
29	# -----------------
30	# $Id: subjob 1090 2013-02-02 07:06:13Z raasch $
31	#
32	# 1046 2012-11-09 14:38:45Z maronga
33	# code put under GPL (PALM 3.9)
34	#
35	# 08/07/94 - Siggi - first version finished
36	# 29/06/94 - Siggi - script development started
37	#--------------------------------------------------------------------------------#
38	# subjob - script for automatic generation and submission of batch-job files
39	# for various batch queuing systems
40	#--------------------------------------------------------------------------------#
41
42
43	# VARIABLENVEREINBARUNGEN + DEFAULTWERTE
44	delete_dayfile=false
45	email_notification=none
46	group_number=none
47	locat=normal
48	no_default_queue=none
49	no_submit=false
50	job_catalog="~/job_queue"
51	job_name=none
52	local_user=$LOGNAME
53	node_usage=shared
54	numprocs=0
55	punkte="..........................................................."
56	submcom=qsub
57	queue=default
58	remote_host=none
59	remote_user=""
60	verify=true
61
62	typeset -i cputime=0 memory=0 Memory=0 minuten resttime sekunden stunden
63	typeset -i inumprocs mpi_tasks=0 nodes=0 processes_per_node=0 tasks_per_node=0 threads_per_task=1
64	typeset -L20 spalte1
65	typeset -R40 spalte2
66	typeset -L60 spalte3
67
68
69
70	# FEHLERBEHANDLUNG
71	# BEI EXIT:
72	trap 'if [[ $locat != normal ]]
73	then
74	case $locat in
75	(option) printf "\n --> available optios can be displayed"
76	printf " by typing:"
77	printf "\n \"subjob ?\" \n";;
78	(ftpcopy\|parameter\|scp\|verify) printf "\n";;
79	(*) printf "\n +++ unknown error"
80	printf "\n please inform S. Raasch!\n"
81	esac
82	[[ -f $job_to_send ]] && rm $job_to_send
83	printf "\n\n+++ SUBJOB killed \n\n"
84	fi' exit
85
86
87	# BEI TERMINAL-BREAK:
88	trap '[[ -f $job_to_send ]] && rm $job_to_send
89	printf "\n\n+++ SUBJOB killed \n\n"
90	exit
91	' 2
92
93
94
95
96	# LOKALEN HOSTNAMEN FESTSTELLEN
97	local_host=$(hostname)
98
99
100
101	# HOSTSPEZIFISCHE VARIABLEN VEREINBAREN BZW. PRUEFEN, OB LOKALER HOST
102	# UEBERHAUPT ZULAESSIG IST
103	# Note: One of the entries for "lck" or "lckordi" always has to be
104	# comment out, because the hostname (node*) is same for both machines
105	case $local_host in
106	(atmos) local_addres=172.20.25.35; local_host=lcide;;
107	(autan) local_addres=130.75.105.57; local_host=lcmuk;;
108	(bora) local_addres=130.75.105.103; local_host=lcmuk;;
109	(bd1) local_addres=130.73.232.64; local_host=lcsgib;;
110	(bd2) local_addres=130.73.232.65; local_host=lcsgib;;
111	(bd3) local_addres=130.73.232.66; local_host=lcsgib;;
112	(bd4) local_addres=130.73.232.67; local_host=lcsgib;;
113	(b01*\|bicegate1) local_addres=130.73.232.102; local_host=lcsgib;;
114	(bicegate2) local_addres=130.73.232.103; local_host=lcsgib;;
115	(blizzard1) local_addres=136.172.40.15; local_host=ibmh;;
116	(breva) local_addres=130.75.105.98; local_host=lcmuk;;
117	(caurus) local_addres=130.75.105.19; local_host=lcmuk;;
118	(climate*) local_addres=165.132.26.68; local_host=lcyon;;
119	(compute-*.local) local_addres=172.20.4.2; local_host=lcfimm;;
120	(cs*) local_addres=136.172.44.131; local_host=nech;;
121	(elephanta) local_addres=130.75.105.6; local_host=lcmuk;;
122	(fimm.bccs.uib.no) local_addres=172.20.4.2; local_host=lcfimm;;
123	(node*) local_addres=165.132.26.61 local_host=lck;;
124	# (node*) local_addres=210.219.61.8 local_host=lckordi;;
125	(gaia*) local_addres=150.183.146.24; local_host=ibmkisti;;
126	(gallego) local_addres=130.75.105.10; local_host=lcmuk;;
127	(gfdl5) local_addres=165.132.26.58; local_host=ibmy;;
128	(gfdl3.yonsei.ac.kr) local_addres=165.132.26.56; local_host=decalpha;;
129	(gregale) local_addres=130.75.105.109; local_host=lcmuk;;
130	(hababai) local_addres=130.75.105.108; local_host=lcmuk;;
131	(hexagon.bccs.uib.no) local_addres=129.177.20.113; local_host=lcxe6;;
132	(hd1) local_addres=130.75.4.104; local_host=lcsgih;;
133	(hd2) local_addres=130.75.4.105; local_host=lcsgih;;
134	(hd3) local_addres=130.75.4.106; local_host=lcsgih;;
135	(hd4) local_addres=130.75.4.107; local_host=lcsgih;;
136	(hicegate0) local_addres=130.75.4.101; local_host=lcsgih;;
137	(h01*\|hicegate1) local_addres=130.75.4.102; local_host=lcsgih;;
138	(hicegate2) local_addres=130.75.4.103; local_host=lcsgih;;
139	(hx*) local_addres=133.3.51.11; local_host=lckyoto;;
140	(inferno) local_addres=130.75.105.5; local_host=lcmuk;;
141	(irifi) local_addres=130.75.105.104; local_host=lcmuk;;
142	(sno) local_addres=130.75.105.113; local_host=lcmuk;;
143	(levanto) local_addres=130.75.105.45; local_host=lcmuk;;
144	(login*) local_addres=118.128.66.223; local_host=lckiaps;;
145	(maestro) local_addres=130.75.105.2; local_host=lcmuk;;
146	(meteo-login*) local_addres=193.166.211.144;local_host=lcxt5m;;
147	(hexagon*) local_addres=129.177.20.113; local_host=lcxe6;;
148	(nobel*) local_addres=150.183.5.101; local_host=ibms;;
149	(orkan) local_addres=130.75.105.3; local_host=lcmuk;;
150	(ostria) local_addres=130.75.105.106; local_host=lcmuk;;
151	(paesano) local_addres=130.75.105.46; local_host=lcmuk;;
152	(pingui) local_addres=134.106.74.118; local_host=lcfor;;
153	(quanero) local_addres=130.75.105.107; local_host=lcmuk;;
154	(rte*) local_addres=133.5.185.60; local_host=lcrte;;
155	(scirocco) local_addres=172.20.25.41; local_host=lcmuk;;
156	(solano) local_addres=130.75.105.110; local_host=lcmuk;;
157	(sugoka*) local_addres=172.31.120.1; local_host=lckyut;;
158	(sun1\|sun2) local_addres=130.75.6.1; local_host=unics;;
159	(sx-*) local_addres=172.16.1.131; local_host=necriam;;
160	(r1*) local_addres=130.75.4.102; local_host=lcsgih;;
161	(r2*) local_addres=130.73.232.102; local_host=lcsgib;;
162	(t2a*) local_addres=10.1.6.165; local_host=lctit;;
163	(urban*) local_addres=147.46.30.151 local_host=lcsb;;
164	(vorias) local_addres=172.20.25.43; local_host=lcmuk;;
165	(*.cc.kyushu-u.ac.jp) local_addres=133.5.4.129; local_host=ibmku;;
166	(*) printf "\n +++ \"$local_host\" unknown";
167	printf "\n please inform S. Raasch!";
168	locat=parameter; exit;;
169	esac
170
171
172
173	# REMOTE HOST DEFAULTMAESSIG = LOCAL HOST SETZEN
174	remote_host=$local_host
175
176
177
178
179	# PROZEDUROPTIONEN EINLESEN
180	while getopts :c:dDe:g:h:m:n:N:O:q:t:T:u:vX: option
181	do
182	case $option in
183	(c) job_catalog=$OPTARG;;
184	(d) delete_dayfile=true;;
185	(D) no_submit=true;;
186	(e) email_notification=$OPTARG;;
187	(g) group_number=$OPTARG;;
188	(h) remote_host=$OPTARG;;
189	(m) memory=$OPTARG;;
190	(n) job_name=$OPTARG;;
191	(N) node_usage=$OPTARG;;
192	(O) threads_per_task=$OPTARG;;
193	(q) no_default_queue=$OPTARG;;
194	(t) cputime=$OPTARG;;
195	(T) tasks_per_node=$OPTARG;;
196	(u) remote_user=$OPTARG;;
197	(v) verify=false;;
198	(X) numprocs=$OPTARG;;
199	(\?) printf "\n +++ Option $OPTARG unknown \n";
200	locat=option; exit;;
201	esac
202	done
203
204
205	# JOBDATEINAMEN ALS NAECHSTES ARGUMENT HOLEN
206	shift OPTIND-1; file_to_send=$1
207
208
209	# KURZE AUFRUFBESCHREIBUNG WIRD HIER AUSGEGEBEN
210	if [ "$1" = "?" ]
211	then
212	(printf "\n *** subjob can be called as follows:\n"
213	printf "\n subjob -c.. -d -D -h.. -m.. -q.. -t.. -u.. -v <jobfile>\n"
214	printf "\n Description of available options:\n"
215	printf "\n Option Description Default-Value"
216	printf "\n -c job-input- and output-catalog ~/job_queue"
217	printf "\n -d no job-protocol will be created ---"
218	printf "\n -D only the job-file will be created ---"
219	printf "\n -h execution host, available hosts: $remote_host"
220	printf "\n ibm, ibmh, ibmkisti, ibmku, ibms, ibmy, lc...,"
221	printf "\n lckiaps, lctit, nech, necriam, unics"
222	printf "\n -m memory demand per process in MByte ---"
223	printf "\n -n jobname <jobdatei>"
224	printf "\n -O threads per task (for OpenMP usage) 1"
225	printf "\n -q job-queue to be used default"
226	printf "\n -t allowed cpu-time in seconds ---"
227	printf "\n -T tasks per node (on parallel hosts) ---"
228	printf "\n -u username on execution host from .netrc"
229	printf "\n -v no prompt for confirmation ---"
230	printf "\n -X # of processors (on parallel hosts) 1"
231	printf "\n "
232	printf "\n The only possible positional parameter is <jobfile>:"
233	printf "\n The complete NQS-job must be provided here."
234	printf "\n <jobfile>=? creates this outline\n\n") \| more
235	exit
236	fi
237
238
239
240	# PRUEFEN, OB JOBDATEI ANGEGEBEN WURDE UND OB SIE AUCH EXISTIERT
241	if [[ "$file_to_send" = "" ]]
242	then
243	printf "\n +++ job-file missing"
244	locat=parameter; exit
245	else
246	if [[ -f $file_to_send ]]
247	then
248	true
249	else
250	printf "\n +++ job-file: "
251	printf "\n $file_to_send"
252	printf "\n does not exist"
253	locat=parameter; exit
254	fi
255	fi
256
257
258
259	# FALLS KEIN JOBNAME ANGEGEBEN WURDE, WIRD JOBNAME = JOBDATEINAME
260	# GESETZT. VORAUSSETZUNG: JOBDATEINAME BEINHALTET KEINE PFADE
261	if [[ $job_name = none ]]
262	then
263	job_name=$file_to_send
264	fi
265	if [[ $(echo $job_name \| grep -c "/") != 0 ]]
266	then
267	printf "\n +++ job-file name: "
268	printf "\n $job_name"
269	printf "\n must not contain \"/\"-characters"
270	locat=parameter; exit
271	fi
272
273
274
275
276	# HOSTSPEZIFISCHE GROESSEN VEREINBAREN BZW. ABBRUCH BEI UNZULAESSIGEM HOST
277	# ODER WENN HOST NICHT ANGEGEBEN WURDE
278	if [[ $remote_host = none ]]
279	then
280	printf "\n +++ host missing"
281	locat=option; exit
282	else
283	case $remote_host in
284	(ibm) queue=p690_standard; remote_addres=134.76.99.81; submcom=/usr/lpp/LoadL/full/bin/llsubmit;;
285	(ibmh) queue=no_class; remote_addres=136.172.40.15; submcom=/usr/lpp/LoadL/full/bin/llsubmit;;
286	(ibmkisti) queue=class.32plus; remote_addres=150.183.146.24; submcom=/usr/lpp/LoadL/full/bin/llsubmit;;
287	(ibmku) queue=s4; remote_addres=133.5.4.129; submcom=/usr/local/bin/llsubmit;;
288	(ibms) queue=p_normal; remote_addres=150.183.5.101; submcom=/usr/lpp/LoadL/full/bin/llsubmit;;
289	(ibmy) queue=parallel; remote_addres=165.132.26.58; submcom=/usr/lpp/LoadL/full/bin/llsubmit;;
290	(lcfimm) remote_addres=172.20.4.2; submcom=/opt/torque/bin/qsub;;
291	(lckyoto) remote_addres=133.3.51.11; submcom=/thin/local/bin/qsub;;
292	(lcsgib) queue=smallq; remote_addres=130.73.232.104; submcom=/opt/moab/bin/msub;;
293	(lcsgih) queue=smallq; remote_addres=130.75.4.101; submcom=/opt/moab/bin/msub;;
294	(lck) remote_addres=165.132.26.61; submcom=/usr/torque/bin/qsub;;
295	(lckiaps) remote_addres=118.128.66.223; submcom=/cm/shared/apps/pbspro/11.0.2.110766/bin/qsub;;
296	(lckordi) remote_addres=210.219.61.8; submcom=/usr/torque/bin/qsub;;
297	(lckyut) remote_addres=133.5.4.37; submcom=/usr/bin/pjsub;;
298	(lcsb) remote_addres=147.46.30.151; submcom=/usr/torque/bin/qsub;;
299	(lctit) queue=S; remote_addres=10.1.6.165; submcom=/opt/pbs/tools/bin/t2sub;;
300	(lcxe6) remote_addres=129.177.20.113; submcom=/opt/torque/2.5.10/bin/qsub;;
301	(lcxt5m) remote_addres=193.166.211.144; submcom=/opt/pbs/10.1.0.91350/bin/qsub;;
302	(lcyon) remote_addres=165.132.26.68; submcom=/usr/torque/bin/qsub;;
303	(nech) qsubmem=memsz_job; qsubtime=cputim_job; remote_addres=136.172.44.147; submcom="/usr/local/bin/qsub";;
304	(necriam) qsubmem=memsz_job; qsubtime=cputim_job; remote_addres=172.16.1.131; submcom="/usr/bin/nqsII/qsub";;
305	(vpp) qsubmem=m; qsubtime=t; queue=vpp; remote_addres=130.75.4.130;;
306	(unics) qsubmem=d; qsubtime=t; queue=unics; remote_addres=130.75.6.1;;
307	(*) printf "\n +++ hostname \"$remote_host\" not allowed";
308	locat=parameter; exit;;
309	esac
310	fi
311
312
313	# EVTL. PRUEFEN, OB ANGEGEBENE QUEUE ZULAESSIG IST
314	if [[ $no_default_queue != none ]]
315	then
316	error=false
317	ndq=$no_default_queue
318	case $remote_host in
319	(ibm) case $ndq in
320	(p690_express\|p690_standard\|p690_long) error=false;;
321	(*) error=true;;
322	esac;;
323	(ibmh) case $ndq in
324	(no_class) error=false;;
325	(*) error=true;;
326	esac;;
327	(ibmkisti) case $ndq in
328	(class.32plus\|class.1-2\|class.2-32) error=false;;
329	(*) error=true;;
330	esac;;
331	(ibmku) case $ndq in
332	(sdbg1\|sdbg2\|sdbg4\|s4\|s16\|s32\|s32-s) error=false;;
333	(*) error=true;;
334	esac;;
335	(ibms) case $ndq in
336	(express\|normal\|p_express\|p_normal\|p_normal_1.3\|p_normal_1.7\|grand) error=false;;
337	(*) error=true;;
338	esac;;
339	(ibmy) case $ndq in
340	(parallel) error=false;;
341	(*) error=true;;
342	esac;;
343	(lckiaps) case $ndq in
344	(express\|normal) error=false;;
345	(*) error=true;;
346	esac;;
347	(lckyoto) case $ndq in
348	(eh\|ph) error=false;;
349	(*) error=true;;
350	esac;;
351	(lckyut) case $ndq in
352	(cx-dbg\|cx-single\|cx-small\|cx-middle\|cx-large) error=false;;
353	(*) error=true;;
354	esac;;
355	(lcsgib\|lcsgih) case $ndq in
356	(testq\|serialq\|smallq\|mediumq\|bigq\|workq\|dataq\|permq\|special1q) error=false;;
357	(*) error=true;;
358	esac;;
359	(lctit) case $ndq in
360	(G\|L128\|L256\|L512H\|S\|S96\|V) error=false;;
361	(*) error=true;;
362	esac;;
363	(t3eb) case $ndq in
364	(berte\|p50\|p100\|p392\|forfree\|p25himem) error=false;;
365	(*) error=true;;
366	esac;;
367	(necriam) case $ndq in
368	(SP\|SS\|P6) error=false;;
369	(*) error=true;;
370	esac;;
371	(t3eh) case $ndq in
372	(para_t3e\|em\|k\|l\|lm\|comp_t3e\|c\|p\|ht) error=false;;
373	(*) error=true;;
374	esac;;
375	(t3ej2\|t3ej5) case $ndq in
376	(low\|normal\|high) error=false;;
377	(*) error=true;;
378	esac;;
379	(t3es) case $ndq in
380	(batch\|serial-4\|pe4\|p48\|pe16\|pe32\|pe64\|pe128) error=false;;
381	(*) error=true;;
382	esac;;
383	(unics) case $ndq in
384	(unics\|ht) error=false;;
385	(*) error=true;;
386	esac;;
387	esac
388	if [[ $error = true ]]
389	then
390	printf "\n +++ queue \"$no_default_queue\" on host \"$remote_host\" not allowed"
391	locat=parameter; exit
392	else
393	queue=$no_default_queue
394	fi
395	fi
396
397
398
399	# PRUEFEN DER CPU-ZEIT, ZEIT NACH STUNDEN, MINUTEN UND SEKUNDEN
400	# AUFTEILEN
401	done=false
402	while [[ $done = false ]]
403	do
404	if (( $cputime <= 0 ))
405	then
406	printf "\n +++ wrong cpu-time or cpu-time missing"
407	printf "\n >>> Please type cpu-time in seconds as INTEGER:"
408	printf "\n >>> "
409	read cputime 1>/dev/null 2>&1
410	else
411	done=true
412	fi
413	done
414	if [[ $remote_host = nech ]]
415	then
416	if (( tasks_per_node != 0 ))
417	then
418	(( cputime = cputime * tasks_per_node ))
419	elif [[ $numprocs != 0 ]]
420	then
421	(( cputime = cputime * numprocs ))
422	fi
423	fi
424	(( stunden = cputime / 3600 ))
425	(( resttime = cputime - stunden * 3600 ))
426	(( minuten = resttime / 60 ))
427	(( sekunden = resttime - minuten * 60 ))
428	timestring=${stunden}:${minuten}:${sekunden}
429
430
431
432	# PRUEFEN DER KERNSPEICHERANFORDERUNG
433	done=false
434	while [[ $done = false ]]
435	do
436	if (( memory <= 0 ))
437	then
438	printf "\n +++ wrong memory demand or memory demand missing"
439	printf "\n >>> Please type memory in MByte per process as INTEGER:"
440	printf "\n >>> "
441	read memory 1>/dev/null 2>&1
442	else
443	done=true
444	fi
445	done
446
447	if [[ $remote_host = nech \|\| $remote_host = necriam ]]
448	then
449	if (( tasks_per_node != 0 ))
450	then
451	(( Memory = memory * tasks_per_node / 1000 ))
452	elif [[ $numprocs != 0 ]]
453	then
454	(( Memory = memory * numprocs / 1000 ))
455	else
456	(( Memory = memory / 1000 ))
457	fi
458	elif [[ $remote_host = lctit ]]
459	then
460	(( Memory = memory * tasks_per_node / 1000 ))
461	fi
462
463
464	# SPEICHERBERECHNUNG BEI OPENMP-NUTZUNG
465	if [[ $(echo $remote_host \| cut -c1-3) = ibm ]]
466	then
467	(( memory = memory * threads_per_task ))
468	fi
469
470
471	# BERECHNUNG DER ANZAHL DER ZU VERWENDENDEN KNOTEN
472	if (( tasks_per_node != 0 ))
473	then
474	(( nodes = numprocs / ( tasks_per_node * threads_per_task ) ))
475	fi
476
477	# Calculate number of processes per node
478	(( processes_per_node = tasks_per_node * threads_per_task ))
479
480	# Calculate number of MPI tasks
481	(( mpi_tasks = numprocs / threads_per_task ))
482
483
484	# HEADER-AUSGABE
485	if [[ $verify = true ]]
486	then
487	printf "\n\n"
488	printf "#--------------------------------------------------------------# \n"
489	spalte1=SUBJOB;spalte2=$(date)
490	printf "\| $spalte1$spalte2 \| \n"
491	printf "\| \| \n"
492	printf "\| values of parameters/options: \| \n"
493	spalte1=local_host$punkte; spalte2=$punkte$local_host
494	printf "\| $spalte1$spalte2 \| \n"
495	spalte1=remote_host$punkte; spalte2=$punkte$remote_host
496	printf "\| $spalte1$spalte2 \| \n"
497	spalte1=queue$punkte; spalte2=$punkte$queue
498	printf "\| $spalte1$spalte2 \| \n"
499	spalte1=memory$punkte; spalte2="$punkte$memory mb"
500	printf "\| $spalte1$spalte2 \| \n"
501	spalte1=cputime$punkte; spalte2="$punkte$cputime sec"
502	printf "\| $spalte1$spalte2 \| \n"
503	spalte1=job_name$punkte; spalte2="$punkte$job_name"
504	printf "\| $spalte1$spalte2 \| \n"
505	printf "#--------------------------------------------------------------# \n\n"
506
507
508	# KONTROLLABFRAGE, OB ALLES O.K.
509	antwort="dummy"
510	while [[ $antwort != y && $antwort != Y && $antwort != n && $antwort != N ]]
511	do
512	read antwort?" >>> continue (y/n) ? "
513	done
514	if [[ $antwort = n \|\| $antwort = N ]]
515	then
516	locat=verify; exit
517	fi
518	printf "\n"
519	fi
520
521
522
523	# ZUFALLSKENNUNG GENERIEREN UND JOBNAMEN AUF ZIELRECHNER BESTIMMEN
524	kennung=$RANDOM
525	job_on_remhost=${job_name}_${kennung}_$local_host
526	job_to_send=job_to_send_$kennung
527	if [[ $delete_dayfile = false ]]
528	then
529	remote_dayfile=${local_host}_${job_name}_result_$kennung
530	local_dayfile=${remote_host}_${job_name}
531	else
532	remote_dayfile=/dev/null
533	fi
534
535
536
537	# Generate the batch job scripts (qsub/msub/LoadLeveler)
538	if [[ $(echo $remote_host \| cut -c1-3) = ibm && $numprocs != 0 ]]
539	then
540
541	# General LoadLeveler settings
542	execute_in_shell="#!/bin/ksh"
543	use_shell="# @ shell = /bin/ksh"
544	consumable_memory="ConsumableMemory($memory mb)"
545	class="# @ class = $queue"
546	environment="# @ environment = OMP_NUM_THREADS=$threads_per_task; MP_SHARED_MEMORY=yes"
547	network_to_use="# @ network.mpi = sn_all,shared,us"
548	data_limit="# @ data_limit = 1.76gb"
549	image_size="# @ image_size = 50"
550	wall_clock_limit="# @ wall_clock_limit = ${timestring},$timestring"
551
552	if [[ $email_notification = none ]]
553	then
554	notify_user=""
555	else
556	notify_user="# @ notify_user = $email_notification"
557	if [[ $delete_dayfile = true ]]
558	then
559	notification='# @ notification = never'
560	fi
561	fi
562
563	if [[ $remote_host = ibmh ]]
564	then
565	data_limit=""
566	network_to_use=""
567	class=""
568	environment=""
569	rset="# @ rset = RSET_MCM_AFFINITY"
570	task_affinity="# @ task_affinity = core(1)"
571	elif [[ $remote_host = ibmkisti ]]
572	then
573	network_to_use="# @ network.MPI = sn_all,shared,US"
574	wall_clock_limit="# @ wall_clock_limit = $timestring"
575	if [[ $threads_per_task = 1 ]]
576	then
577	rset="# @ rset = RSET_MCM_AFFINITY"
578	mcm_affinity_options="# @ mcm_affinity_options = mcm_mem_pref mcm_sni_none mcm_distribute"
579	fi
580	environment=""
581	use_shell=""
582	data_limit=""
583	image_size=""
584	elif [[ $remote_host = ibmku ]]
585	then
586	execute_in_shell="#!/usr/bin/ksh"
587	use_shell="# @ shell = /usr/bin/ksh"
588	consumable_memory=""
589	environment=""
590	network_to_use="# @ network.mpi = sn_all,shared,us"
591	data_limit=""
592	image_size=""
593	elif [[ $remote_host = ibms ]]
594	then
595	network_to_use="# @ network.mpi = csss,shared,us"
596	elif [[ $remote_host = ibmy ]]
597	then
598	consumable_memory=""
599	network_to_use=""
600	fi
601
602	cat > $job_to_send << %%END%%
603	$execute_in_shell
604	$use_shell
605
606	# @ job_type = parallel
607	# @ job_name = $job_name
608	# @ resources = ConsumableCpus($threads_per_task) $consumable_memory
609	# @ output = $remote_dayfile
610	# @ error = $remote_dayfile
611	$wall_clock_limit
612	$image_size
613	$class
614	$environment
615	$network_to_use
616	$data_limit
617	$rset
618	$mcm_affinity_options
619	$task_affinity
620	$notification
621	$notify_user
622
623	%%END%%
624
625	if (( nodes > 0 ))
626	then
627
628	if [[ $remote_host != ibmkisti ]]
629	then
630
631	cat >> $job_to_send << %%END%%
632	# @ node = $nodes
633	# @ tasks_per_node = $processes_per_node
634	# @ node_usage = $node_usage
635	# @ queue
636
637	%%END%%
638
639	else
640
641	cat >> $job_to_send << %%END%%
642	# @ total_tasks = $mpi_tasks
643	# @ blocking = unlimited
644	# @ queue
645
646	%%END%%
647
648	fi
649
650	else
651
652	if [[ $remote_host != ibmy ]]
653	then
654
655	cat >> $job_to_send << %%END%%
656	# @ blocking = unlimited
657	# @ total_tasks = $numprocs
658	# @ node_usage = $node_usage
659	# @ queue
660
661	%%END%%
662
663	else
664
665	cat >> $job_to_send << %%END%%
666	# @ node = 1
667	# @ total_tasks = $numprocs
668	# @ queue
669
670	%%END%%
671
672	fi
673
674	fi
675
676	# workaround because of silly job filter on ibmkisti
677	if [[ $remote_host = ibmkisti && $threads_per_task != 1 ]]
678	then
679	echo "export OMP_NUM_THREADS=$threads_per_task" >> $job_to_send
680	fi
681
682	elif [[ $(echo $remote_host \| cut -c1-3) = ibm && $numprocs = 0 ]]
683	then
684
685	cat > $job_to_send << %%END%%
686	#!/bin/ksh
687
688	# @ job_type = serial
689	# @ node_usage = $node_usage
690	# @ job_name = palm
691	# @ wall_clock_limit = ${timestring},$timestring
692	# @ resources = ConsumableCpus(1) ConsumableMemory(1 gb)
693	# @ output = $remote_dayfile
694	# @ error = $remote_dayfile
695	$class
696	$notification
697
698	# @ queue
699
700	%%END%%
701
702	elif [[ $remote_host = lcfimm ]]
703	then
704
705	if [[ $numprocs != 0 ]]
706	then
707	cat > $job_to_send << %%END%%
708	#!/bin/ksh
709	#PBS -N $job_name
710	#PBS -A $project_account
711	#PBS -l walltime=$timestring
712	#PBS -l nodes=${nodes}:ppn=$processes_per_node
713	#PBS -l pmem=${memory}mb
714	#PBS -m abe
715	#PBS -o $remote_dayfile
716	#PBS -j oe
717	mpd &
718
719	%%END%%
720
721	else
722	cat > $job_to_send << %%END%%
723	#!/bin/ksh
724	#PBS -N $job_name
725	#PBS -A $project_account
726	#PBS -l walltime=$timestring
727	#PBS -l ncpus=1
728	#PBS -l pmem=${memory}mb
729	#PBS -m abe
730	#PBS -o $remote_dayfile
731	#PBS -j oe
732
733	%%END%%
734
735	fi
736
737	elif [[ $remote_host = lck \|\| $remote_host = lckordi \|\| $remote_host = lcsb ]]
738	then
739
740	if [[ $numprocs != 0 ]]
741	then
742	cat > $job_to_send << %%END%%
743	#!/bin/ksh
744	#PBS -N $job_name
745	#PBS -l walltime=$timestring
746	#PBS -l ncpus=$numprocs
747	#PBS -l pmem=${memory}mb
748	#PBS -o $remote_dayfile
749	#PBS -l nodes=$nodes:ppn=${processes_per_node}
750	#PBS -j oe
751
752	mpd &
753
754	%%END%%
755
756	else
757	cat > $job_to_send << %%END%%
758	#!/bin/ksh
759	#PBS -N $job_name
760	#PBS -l walltime=$timestring
761	#PBS -l ncpus=1
762	#PBS -l pmem=${memory}mb
763	#PBS -o $remote_dayfile
764	#PBS -j oe
765
766	%%END%%
767
768	fi
769
770	elif [[ $remote_host = lckiaps ]]
771	then
772
773	if [[ $numprocs != 0 ]]
774	then
775	cat > $job_to_send << %%END%%
776	#!/bin/ksh
777	#PBS -N $job_name
778	#PBS -l walltime=$timestring
779	#PBS -l select=1:ncpus=$numprocs
780	#PBS -l pmem=${memory}mb
781	#PBS -q $queue
782	#PBS -o $remote_dayfile
783	#PBS -j oe
784	#PBS -V
785
786	%%END%%
787
788	else
789	cat > $job_to_send << %%END%%
790	#!/bin/ksh
791	#PBS -N $job_name
792	#PBS -l walltime=$timestring
793	#PBS -l ncpus=1
794	#PBS -l pmem=${memory}mb
795	#PBS -o $remote_dayfile
796	#PBS -j oe
797
798	%%END%%
799
800	fi
801
802	elif [[ $remote_host = lcyon ]]
803	then
804
805	if [[ $numprocs != 0 ]]
806	then
807	cat > $job_to_send << %%END%%
808	#!/bin/ksh
809	#PBS -N $job_name
810	#PBS -l walltime=$timestring
811	#PBS -l ncpus=$numprocs
812	#PBS -l pmem=${memory}mb
813	#PBS -o $remote_dayfile
814	#PBS -j oe
815
816	%%END%%
817
818	else
819	cat > $job_to_send << %%END%%
820	#!/bin/ksh
821	#PBS -N $job_name
822	#PBS -l walltime=$timestring
823	#PBS -l ncpus=1
824	#PBS -l pmem=${memory}mb
825	#PBS -o $remote_dayfile
826	#PBS -j oe
827
828	%%END%%
829
830	fi
831
832	elif [[ $remote_host = lcsgih \|\| $remote_host = lcsgib ]]
833	then
834
835	if [[ "$sgi_feature" != "" ]]
836	then
837	feature_directive="#PBS -l feature=$sgi_feature"
838	else
839	feature_directive=""
840	fi
841
842	if [[ $queue = dataq \|\| $queue = permq ]]
843	then
844	feature_directive="#PBS -l feature=data"
845	fi
846
847	if [[ $queue = testq \|\| $queue = mediumq \|\| $queue = bigq \|\| $queue = workq \|\| $queue = dataq \|\| $queue = permq \|\| $queue = serialq \|\| $queue = special1q ]]
848	then
849	queue_directive="#PBS -q $queue"
850	else
851	queue_directive=""
852	fi
853
854	if [[ $email_notification = none ]]
855	then
856	email_directive=""
857	else
858	email_directive="#PBS -M $email_notification"
859	fi
860
861	if [[ $numprocs != 0 ]]
862	then
863	cat > $job_to_send << %%END%%
864	#!/bin/bash
865	#PBS -N $job_name
866	#PBS -l walltime=$timestring
867	#PBS -l nodes=$nodes:ppn=${processes_per_node}
868	#PBS -l naccesspolicy=$node_usage
869	#PBS -o $remote_dayfile
870	#PBS -j oe
871	$feature_directive
872	$queue_directive
873	$email_directive
874
875	eval \`/sw/swdist/bin/modulesinit\`
876	#. /usr/share/modules/init/bash
877	$init_cmds
878	$module_calls
879
880	echo ld_library_path=\$LD_LIBRARY_PATH
881
882	%%END%%
883
884	else
885	cat > $job_to_send << %%END%%
886	#PBS -S /bin/bash
887	#PBS -N $job_name
888	#PBS -l walltime=$timestring
889	#PBS -l ncpus=1
890	#PBS -o $remote_dayfile
891	#PBS -j oe
892	$queue_directive
893	$email_directive
894
895	eval \`/sw/swdist/bin/modulesinit\`
896	#. /usr/share/modules/init/bash
897	$init_cmds
898	$module_calls
899
900	%%END%%
901
902	fi
903
904	elif [[ $remote_host = lcxe6 ]]
905	then
906
907	if [[ $numprocs != 0 ]]
908	then
909	cat > $job_to_send << %%END%%
910	#!/bin/ksh
911	#PBS -S /bin/ksh
912	#PBS -N $job_name
913	#PBS -A $project_account
914	#PBS -j oe
915	#PBS -l walltime=$timestring
916	#PBS -l mppwidth=${numprocs}
917	#PBS -l mppnppn=${processes_per_node}
918	#PBS -m abe
919	#PBS -o $remote_dayfile
920	$email_directive
921
922	$init_cmds
923	$module_calls
924
925	%%END%%
926
927	else
928	cat > $job_to_send << %%END%%
929	#!/bin/ksh
930	#PBS -S /bin/ksh
931	#PBS -N $job_name
932	#PBS -A $project_account
933	#PBS -j oe
934	#PBS -l walltime=$timestring
935	#PBS -l ncpus=1
936	#PBS -l pmem=${memory}mb
937	#PBS -m abe
938	$email_directive
939	#PBS -o $remote_dayfile
940
941	$init_cmds
942	$module_calls
943
944	%%END%%
945
946	fi
947
948	elif [[ $remote_host = lckyoto ]]
949	then
950
951	cat > $job_to_send << %%END%%
952	#!/bin/ksh
953	# @\$-o $remote_dayfile
954	# @\$-eo -oi
955	# @\$-lP 16
956	# @\$-lp 1
957	# @\$-lm 28gb -llm unlimited -ls unlimited
958	# @\$-q $queue
959	# @\$-Pvn abs_pack
960	##for intel? @\$-Pvn abs_unpack -Pvs unpack -Pvc unpack
961	#. /thin/local/etc/setprofile/intel-11.0.sh
962	#. /thin/local/etc/setprofile/mvapich2-1.4+intel-11.0.sh
963	. ~/.myprofile
964	#. /home2/t/t51254/palm/current_version/myprofile
965	#. /thin/apps/pgi/mpi.sh
966	#
967	env
968	#
969	set -x
970
971	%%END%%
972
973	elif [[ $remote_host = lcxt5m ]]
974	then
975
976	if [[ $numprocs != 0 ]]
977	then
978	cat > $job_to_send << %%END%%
979	#!/bin/ksh
980	#PBS -S /bin/ksh
981	#PBS -N $job_name
982	#PBS -j oe
983	#PBS -l walltime=$timestring
984	#PBS -l mppwidth=${numprocs}
985	#PBS -l mppnppn=${processes_per_node}
986	#PBS -m abe
987	#PBS -o $remote_dayfile
988
989	$init_cmds
990	$module_calls
991
992	%%END%%
993
994	else
995	cat > $job_to_send << %%END%%
996	#!/bin/ksh
997	#PBS -S /bin/ksh
998	#PBS -N $job_name
999	#PBS -j oe
1000	#PBS -l walltime=$timestring
1001	#PBS -l ncpus=1
1002	#PBS -l pmem=${memory}mb
1003	#PBS -m abe
1004	#PBS -o $remote_dayfile
1005
1006	$init_cmds
1007	$module_calls
1008
1009	%%END%%
1010
1011	fi
1012
1013	elif [[ $remote_host = lckyut ]]
1014	then
1015	cat > $job_to_send << %%END%%
1016	#!/bin/bash
1017	#PJM -L "vnode=$numprocs"
1018	#PJM -L "vnode-core=1"
1019	#PJM -L "rscgrp=$queue"
1020	#PJM --no-stging
1021	#PJM -L "elapse=$timestring"
1022	#PJM --mpi proc=$numprocs
1023	#PJM -o $remote_dayfile
1024	#PJM -j
1025
1026	export LANG=en_US.UTF-8
1027	%%END%%
1028
1029	elif [[ $remote_host = nech ]]
1030	then
1031
1032	if (( nodes > 1 ))
1033	then
1034	cat > $job_to_send << %%END%%
1035	#!/bin/ksh
1036	#PBS -l cpunum_prc=$processes_per_node,cputim_job=$cputime
1037	#PBS -l ${qsubmem}=${Memory}gb
1038	#PBS -b $nodes
1039	#PBS -o $remote_dayfile
1040	#PBS -N palm
1041	#PBS -j o
1042	#PBS -T mpisx
1043
1044	%%END%%
1045
1046	elif [[ $numprocs != 0 ]]
1047	then
1048	cat > $job_to_send << %%END%%
1049	#!/bin/ksh
1050	#PBS -l cpunum_prc=$processes_per_node,cputim_job=$cputime
1051	#PBS -l ${qsubmem}=${Memory}gb
1052	#PBS -o $remote_dayfile
1053	#PBS -N palm
1054	#PBS -j o
1055
1056	%%END%%
1057
1058	else
1059	cat > $job_to_send << %%END%%
1060	#!/bin/ksh
1061	#PBS -l ${qsubmem}=${Memory}gb,${qsubtime}=$cputime
1062	#PBS -o $remote_dayfile
1063	#PBS -j o
1064
1065	%%END%%
1066
1067	fi
1068
1069	elif [[ $remote_host = necriam ]]
1070	then
1071
1072	if (( nodes > 1 ))
1073	then
1074	cat > $job_to_send << %%END%%
1075	#!/bin/ksh
1076	#PBS -b $nodes
1077	#PBS -o $remote_dayfile
1078	#PBS -N $job_name
1079	#PBS -j o
1080	#PBS -v MPIPROGINV=YES
1081
1082	%%END%%
1083
1084	elif [[ $numprocs != 0 ]]
1085	then
1086	cat > $job_to_send << %%END%%
1087	#!/bin/ksh
1088	#PBS -q ${queue}
1089	#PBS -o $remote_dayfile
1090	#PBS -N $job_name
1091	#PBS -j o
1092	#PBS -v MPIPROGINV=YES
1093
1094	%%END%%
1095
1096	else
1097	cat > $job_to_send << %%END%%
1098	#!/bin/ksh
1099	#PBS -o $remote_dayfile
1100	#PBS -j o
1101
1102	%%END%%
1103
1104	fi
1105
1106	elif [[ $remote_host = lctit ]]
1107	then
1108	cat > $job_to_send << %%END%%
1109	#!/bin/ksh
1110	$init_cmds
1111	$module_calls
1112
1113	%%END%%
1114
1115	# OPTIONEN FUER SUBMIT-KOMMANDO ZUSAMMENSTELLEN
1116	if [[ $tasks_per_node != $processes_per_node ]]
1117	then
1118	submcom="$submcom -W group_list=$group_number -N $job_name -l walltime=$timestring -l select=$nodes:ncpus=$processes_per_node:mpiprocs=$tasks_per_node:mem=${Memory}gb -o $remote_dayfile -j oe -q $queue "
1119	else
1120	submcom="$submcom -W group_list=$group_number -N $job_name -l walltime=$timestring -l select=$nodes:ncpus=$processes_per_node:mpiprocs=$tasks_per_node:mem=${Memory}gb -l place=scatter -o $remote_dayfile -j oe -q $queue "
1121	fi
1122
1123	else
1124
1125	cat > $job_to_send << %%END%%
1126	# @\$-q ${queue}
1127	# @\$-l${qsubtime} $timestring
1128	# @\$-l${qsubmem} ${memory}mb
1129	# @\$-o $remote_dayfile
1130	# @\$-eo
1131
1132	%%END%%
1133
1134	fi
1135
1136
1137	# BEI RECHNUNG AUF REMOTE-MASCHINEN RUECKTRANSFER DES DAYFILES PER TRAP
1138	# BEI EXIT VERANLASSEN
1139	# VEKTORRECHNER MUSS EIGENEN JOB STARTEN, DA DORT NOHUP NICHT FUNKTIONIERT
1140	# AUF IBM IN SEOUL IST RUECKTRANSFER ZUR ZEIT GENERELL NICHT MOEGLICH
1141	if [[ $delete_dayfile = false && $remote_host != $local_host ]]
1142	then
1143	echo "set +vx" >> $job_to_send
1144	echo "trap '" >> $job_to_send
1145	echo "set +vx" >> $job_to_send
1146	if [[ $(echo $remote_host \| cut -c1-3) = ibm \|\| $(echo $remote_host \| cut -c1-5) = lcsgi \|\| $(echo $remote_host \| cut -c1-3) = nec \|\| $remote_host = lckiaps \|\| $remote_host = lckyut ]]
1147	then
1148	if [[ $remote_host = ibmh ]]
1149	then
1150	return_queue=c1
1151	elif [[ $remote_host = ibmkisti ]]
1152	then
1153	return_queue=class.1-2
1154	elif [[ $remote_host = ibmku ]]
1155	then
1156	return_queue=sdbg2
1157	elif [[ $remote_host = ibms ]]
1158	then
1159	return_queue=p_normal
1160	elif [[ $remote_host = ibmy ]]
1161	then
1162	return_queue=serial
1163	elif [[ $remote_host = lcsgih \|\| $remote_host = lcsgib ]]
1164	then
1165	return_queue=serialq
1166	elif [[ $remote_host = necriam ]]
1167	then
1168	return_queue=SP
1169	elif [[ $remote_host = lckiaps ]]
1170	then
1171	return_queue=express
1172	elif [[ $remote_host = lckyut ]]
1173	then
1174	return_queue=cx-single
1175	else
1176	return_queue=unknown
1177	fi
1178
1179	if [[ $(echo $remote_host \| cut -c1-3) = ibm ]]
1180	then
1181
1182	if [[ $remote_host = ibmku ]]
1183	then
1184	echo "echo \"#!/usr/bin/ksh\" >> scpjob.$kennung" >> $job_to_send
1185	echo "echo \"# @ shell = /usr/bin/ksh\" >> scpjob.$kennung" >> $job_to_send
1186	else
1187	echo "echo \"#!/bin/ksh\" >> scpjob.$kennung" >> $job_to_send
1188	fi
1189	echo "echo \"# @ job_type = serial\" >> scpjob.$kennung" >> $job_to_send
1190	echo "echo \"# @ job_name = transfer\" >> scpjob.$kennung" >> $job_to_send
1191	echo "echo \"# @ resources = ConsumableCpus(1) ConsumableMemory(1 gb)\" >> scpjob.$kennung" >> $job_to_send
1192	echo "echo \"# @ wall_clock_limit = 00:10:00,00:10:00\" >> scpjob.$kennung " >> $job_to_send
1193	echo "echo \"# @ output = job_queue/last_job_transfer_protocol\" >> scpjob.$kennung" >> $job_to_send
1194	echo "echo \"# @ error = job_queue/last_job_transfer_protocol\" >> scpjob.$kennung" >> $job_to_send
1195	if [[ $host != "ibmh" ]]
1196	then
1197	echo "echo \"# @ class = $return_queue\" >> scpjob.$kennung" >> $job_to_send
1198	fi
1199	echo "echo \"# @ image_size = 10\" >> scpjob.$kennung" >> $job_to_send
1200	echo "echo \"# @ notification = never\" >> scpjob.$kennung" >> $job_to_send
1201
1202	echo "echo \"# @ queue\" >> scpjob.$kennung" >> $job_to_send
1203	echo "echo \" \" >> scpjob.$kennung" >> $job_to_send
1204
1205	echo "echo \"set -x\" >> scpjob.$kennung" >> $job_to_send
1206	echo "echo \"batch_scp -d -w 10 -u $local_user $local_addres ${job_catalog}/$remote_dayfile \\\"$job_catalog\\\" $local_dayfile\" >> scpjob.$kennung" >> $job_to_send
1207	if [[ $remote_host = ibmku ]]
1208	then
1209	echo "echo \"rm scpjob.$kennung\" >> scpjob.$kennung" >> $job_to_send
1210	fi
1211	echo "echo \"exit\" >> scpjob.$kennung" >> $job_to_send
1212
1213	elif [[ $remote_host = nech ]]
1214	then
1215	echo "cd /pf/b/${remote_user}/job_queue" >> $job_to_send
1216	echo "cat > scpjob.$kennung << %%END%%" >> $job_to_send
1217	echo "#PBS -l ${qsubmem}=1GB,${qsubtime}=100" >> $job_to_send
1218	echo "#PBS -o last_job_transfer_protocol" >> $job_to_send
1219	echo "#PBS -j o" >> $job_to_send
1220	echo " " >> $job_to_send
1221	echo "set -x" >> $job_to_send
1222	echo "cd /pf/b/${remote_user}/job_queue" >> $job_to_send
1223	echo "batch_scp -d -w 10 -u $local_user $local_addres $remote_dayfile \"$job_catalog\" $local_dayfile" >> $job_to_send
1224	echo "[[ \"\$for_subjob_to_do\" != \"\" ]] && eval \$for_subjob_to_do" >> $job_to_send
1225	echo "%%END%%" >> $job_to_send
1226
1227	elif [[ $remote_host = necriam ]]
1228	then
1229	echo "cat > scpjob.$kennung << %%END%%" >> $job_to_send
1230	echo "#PBS -q $return_queue" >> $job_to_send
1231	echo "#PBS -o last_job_transfer_protocol" >> $job_to_send
1232	echo "#PBS -j o" >> $job_to_send
1233	echo " " >> $job_to_send
1234	echo "set -x" >> $job_to_send
1235	echo "batch_scp -d -w 10 -u $local_user $local_addres $remote_dayfile \"$job_catalog\" $local_dayfile" >> $job_to_send
1236	echo "[[ \"\$for_subjob_to_do\" != \"\" ]] && eval \$for_subjob_to_do" >> $job_to_send
1237	echo "%%END%%" >> $job_to_send
1238
1239	elif [[ $remote_host = lckyut ]]
1240	then
1241	echo "cat > scpjob.$kennung << %%END%%" >> $job_to_send
1242	echo "#!/bin/bash" >> $job_to_send
1243	echo "#PJM -L \"vnode=1\"" >> $job_to_send
1244	echo "#PJM -L \"rscgrp=$return_queue\"" >> $job_to_send
1245	echo "#PJM --no-stging" >> $job_to_send
1246	echo "#PJM -L \"elapse=30:00\"" >> $job_to_send
1247	echo "#PJM -o \$HOME/job_queue/last_job_transfer_protocol" >> $job_to_send
1248	echo "#PJM -j" >> $job_to_send
1249	echo " " >> $job_to_send
1250	echo "export LANG=en_US.UTF-8" >> $job_to_send
1251	echo "set -x" >> $job_to_send
1252	echo "batch_scp -d -w 10 -u $local_user $local_addres $remote_dayfile \"$job_catalog\" $local_dayfile" >> $job_to_send
1253	echo "[[ \"\$for_subjob_to_do\" != \"\" ]] && eval \$for_subjob_to_do" >> $job_to_send
1254	echo "%%END%%" >> $job_to_send
1255
1256	elif [[ $(echo $remote_host \| cut -c1-5) = lcsgi ]]
1257	then
1258	echo "cat > scpjob.$kennung << %%END%%" >> $job_to_send
1259	echo "#!/bin/bash" >> $job_to_send
1260	echo "#PBS -N job_protocol_transfer" >> $job_to_send
1261	echo "#PBS -l walltime=00:30:00" >> $job_to_send
1262	echo "#PBS -l nodes=1:ppn=1" >> $job_to_send
1263	echo "#PBS -l feature=data" >> $job_to_send
1264	echo "#PBS -o \$HOME/job_queue/last_job_transfer_protocol" >> $job_to_send
1265	echo "#PBS -j oe" >> $job_to_send
1266	echo " " >> $job_to_send
1267	echo ". /usr/share/modules/init/bash" >> $job_to_send
1268	echo "set -x" >> $job_to_send
1269	echo "batch_scp -d -w 10 -u $local_user $local_addres ${job_catalog}/$remote_dayfile \"$job_catalog\" $local_dayfile" >> $job_to_send
1270	echo "[[ \"\$for_subjob_to_do\" != \"\" ]] && eval \$for_subjob_to_do" >> $job_to_send
1271	echo "%%END%%" >> $job_to_send
1272
1273	else
1274
1275	echo "cat > scpjob.$kennung << %%END%%" >> $job_to_send
1276	echo "# @\\\$-q $return_queue" >> $job_to_send
1277	echo "# @\\\$-l${qsubtime} 10" >> $job_to_send
1278	echo "# @\\\$-l${qsubmem} 10mb" >> $job_to_send
1279	if [[ $remote_host = t3ej2 \|\| $remote_host = t3ej5 \|\| $remote_host = t3es ]]
1280	then
1281	echo "# @\$-l mpp_p=0" >> $job_to_send
1282	fi
1283	echo '# @\$-lF 10mb' >> $job_to_send
1284	# echo '# @\$-o /dev/null' >> $job_to_send
1285	echo '# @\$-o job_queue/last_job_transfer_protocol' >> $job_to_send
1286	echo '# @\\\$-eo' >> $job_to_send
1287	echo " " >> $job_to_send
1288	if [[ $remote_host = t3ej2 \|\| $remote_host = t3ej5 ]]
1289	then
1290	echo "set +vx" >> $job_to_send
1291	echo ". .profile" >> $job_to_send
1292	fi
1293	echo "set -x" >> $job_to_send
1294	echo "batch_scp -d -w 10 -u $local_user $local_addres ${job_catalog}/$remote_dayfile \"$job_catalog\" $local_dayfile > /dev/null" >> $job_to_send
1295	echo "[[ \"\$for_subjob_to_do\" != \"\" ]] && eval \$for_subjob_to_do" >> $job_to_send
1296	echo "%%END%%" >> $job_to_send
1297	fi
1298
1299	if [[ $(echo $remote_host \| cut -c1-3) = ibm ]]
1300	then
1301	echo "llsubmit scpjob.$kennung" >> $job_to_send
1302	elif [[ $(echo $remote_host \| cut -c1-5) = lcsgi ]]
1303	then
1304	echo "rm -rf \$HOME/job_queue/last_job_transfer_protocol" >> $job_to_send
1305	echo "chmod u+x scpjob.$kennung" >> $job_to_send
1306	echo "msub scpjob.$kennung" >> $job_to_send
1307	elif [[ $remote_host = t3eb \|\| $remote_host = t3eh \|\| $remote_host = t3ej2 \|\| $remote_host = t3ej5 ]]
1308	then
1309	echo "qsub -J n scpjob.$kennung" >> $job_to_send
1310	elif [[ $remote_host = t3es ]]
1311	then
1312	echo "qsub -J n -s /bin/ksh scpjob.$kennung" >> $job_to_send
1313	elif [[ $remote_host = lckiaps ]]
1314	then
1315	echo "mv scpjob.$kennung $job_catalog" >> $job_to_send
1316	echo "ssh ${remote_username}@${remote_addres} \"$submcom ${job_catalog}/scpjob.$kennung\" " >> $job_to_send
1317	echo "rm ${job_catalog}/scpjob.$kennung" >> $job_to_send
1318	elif [[ $remote_host = lckyut ]]
1319	then
1320	echo "scp -P 22 scpjob.$kennung ${remote_username}@${remote_addres}:job_queue" >> $job_to_send
1321	echo "ssh -p 22 ${remote_username}@${remote_addres} \"cd job_queue; $submcom scpjob.$kennung; rm scpjob.$kennung\" " >> $job_to_send
1322	else
1323	echo "$submcom scpjob.$kennung" >> $job_to_send
1324	fi
1325	if [[ $remote_host != ibmku && $remote_host != lckiaps ]]
1326	then
1327	echo "rm scpjob.$kennung" >> $job_to_send
1328	fi
1329	if [[ $remote_host = nech ]]
1330	then
1331	echo "cd -" >> $job_to_send
1332	fi
1333	else
1334	# echo "ftpcopy -d $local_addres ${job_catalog}/$remote_dayfile \"$job_catalog\" $local_dayfile" >> $job_to_send
1335	echo "nohup ftpcopy -d -w 15 $local_addres ${job_catalog}/$remote_dayfile \"$job_catalog\" $local_dayfile > /dev/null &" >> $job_to_send
1336	fi
1337	echo "set -x" >> $job_to_send
1338	echo " ' exit" >> $job_to_send
1339	echo "set -x" >> $job_to_send
1340	fi
1341
1342
1343
1344	# EIGENTLICHE JOB-DATEI AN QSUB-KOMMANDOS ANHAENGEN
1345	cat $file_to_send >> $job_to_send
1346
1347	if [[ $remote_host = ibm ]]
1348	then
1349	echo " " >> $job_to_send
1350	echo "exit" >> $job_to_send
1351	fi
1352
1353	# remove job file
1354	if [[ $remote_host = lctit \|\| $remote_host = ibmku ]]
1355	then
1356	echo " " >> $job_to_send
1357	echo "rm ~/job_queue/$job_on_remhost" >> $job_to_send
1358	fi
1359
1360
1361
1362	# USER-NAME AUF ZIELRECHNER AUS .NETRC-DATEI ERMITTELN
1363	if [[ -z $remote_user ]]
1364	then
1365	if [[ $remote_host = t3eb \|\| $remote_host = t3eh \|\| $remote_host = t3ej2 \|\| $remote_host = t3ej5 \|\| $remote_host = t3es \|\| $remote_host = vpp ]]
1366	then
1367	grep $remote_addres ~/.netrc \| read dum dum dum remote_user dum dum
1368	fi
1369	fi
1370
1371
1372
1373	# JOB AUF ZIELRECHNER TRANSFERIEREN BZW. INS JOBVERZEICHNIS KOPIEREN
1374	if [[ $no_submit = false ]]
1375	then
1376	if [[ $remote_host != $local_host ]]
1377	then
1378	[[ $verify = true ]] && printf "\n >>> transfering job to \"$remote_host\"..."
1379	if [[ $remote_host = ibms \|\| $remote_host = ibmy ]] # ssh on ibms cannot handle "~/"
1380	then
1381	job_catalog_save=$job_catalog
1382	job_catalog=job_queue
1383	elif [[ $remote_host = nech ]]
1384	then
1385	job_catalog_save=$job_catalog
1386	job_catalog=/hpf/b/${remote_user}/job_queue
1387	fi
1388	if [[ $local_host = decalpha ]]
1389	then
1390	# VERWENDUNG VON SCP AUF DECALPHA FRAGT FEHLERHAFTERWEISE
1391	# PASSWORT AB
1392	/bin/scp $job_to_send ${remote_user}@${remote_addres}:${job_catalog}/$job_on_remhost
1393	elif [[ $remote_host = nech ]]
1394	then
1395	# DATEIEN KOENNEN NUR UEBER DEN ARCHIVE-SERVER DES DKRZ
1396	# TRANSFERIERT WERDEN
1397	scp $job_to_send ${remote_user}@136.172.44.205:${job_catalog}/$job_on_remhost
1398	else
1399	scp $job_to_send ${remote_user}@${remote_addres}:${job_catalog}/$job_on_remhost
1400	fi
1401	if [[ $? = 1 ]]
1402	then
1403	locat=scp; exit
1404	fi
1405	if [[ $remote_host = ibms ]]
1406	then
1407	job_catalog=$job_catalog_save
1408	fi
1409	[[ $verify = true ]] && printf "\n >>> finished\n"
1410	else
1411	eval job_catalog=$job_catalog
1412	cp $job_to_send ${job_catalog}/$job_on_remhost
1413	fi
1414
1415
1416
1417	# NQS- BZW. LOADLEVELER-JOB STARTEN
1418	if [[ $remote_host != $local_host ]]
1419	then
1420	[[ $verify = true ]] && printf "\n >>> submitting job using \"qsub\"...\n"
1421
1422	if [[ $(echo $remote_host \| cut -c1-5) = lcsgi && $prio = true ]]
1423	then
1424	printf "\n >>> submit with HLRN qos-feature hiprio...\n"
1425	ssh $remote_addres -l $remote_user "cd $job_catalog; $submcom -l qos=hiprio $job_on_remhost; rm $job_on_remhost"
1426	elif [[ $remote_host = ibmku ]]
1427	then
1428	ssh $remote_addres -l $remote_user "cd $job_catalog; $submcom $job_on_remhost"
1429	else
1430	ssh $remote_addres -l $remote_user "cd $job_catalog; $submcom $job_on_remhost; rm $job_on_remhost"
1431	fi
1432
1433	[[ $verify = true ]] && printf " >>> o.k.\n"
1434	else
1435	cd $job_catalog
1436	if [[ $(echo $local_host \| cut -c1-5) = lcsgi \|\| $(echo $local_host \| cut -c1-3) = ibm ]]
1437	then
1438	eval $submcom $job_on_remhost
1439	elif [[ $local_host = lcfimm \|\| $local_host = lctit \|\| $localhost = lcxe6 \|\| $localhost = lck \|\| $localhost = lckordi \|\| $localhost = lcyon \|\| $localhost = lcsb \|\| $localhost = lckyut ]]
1440	then
1441	chmod u+x $job_on_remhost
1442	echo "$submcom $job_on_remhost"
1443	eval $submcom $job_on_remhost
1444	elif [[ $local_host = nech ]]
1445	then
1446	if [[ $queue = default ]]
1447	then
1448	eval $submcom $job_on_remhost
1449	else
1450	eval $submcom -q $queue $job_on_remhost
1451	fi
1452	else
1453	qsub $job_on_remhost
1454	fi
1455
1456	# Jobfile must not be deleted on lctit/ibmku!! This will be done
1457	# only at the end of the job.
1458	if [[ $local_host != lctit && $local_host != ibmku ]]
1459	then
1460	rm $job_on_remhost
1461	fi
1462	cd - > /dev/null
1463	fi
1464	fi
1465
1466
1467
1468	# ABSCHLUSSARBEITEN
1469
1470	if [[ $no_submit = false ]]
1471	then
1472	rm $job_to_send
1473	fi
1474	[[ $verify = true ]] && printf "\n\n *** SUBJOB finished \n\n"

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