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source: palm/trunk/SCRIPTS/subjob @ 1094

Last change on this file since 1094 was 1094, checked in by raasch, 12 years ago
scp/ssh port can be set explicitly
Property svn:keywords set to `Id Rev`
File size: 48.1 KB

Rev	Line
[1]	1	#!/bin/ksh
[1090]	2
	3	# subjob - script for automatic generation and submission of batch-job files
	4	# for various batch queuing systems
	5
[1046]	6	#--------------------------------------------------------------------------------#
	7	# This file is part of PALM.
	8	#
	9	# PALM is free software: you can redistribute it and/or modify it under the terms
	10	# of the GNU General Public License as published by the Free Software Foundation,
	11	# either version 3 of the License, or (at your option) any later version.
	12	#
	13	# PALM is distributed in the hope that it will be useful, but WITHOUT ANY
	14	# WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR
	15	# A PARTICULAR PURPOSE. See the GNU General Public License for more details.
	16	#
	17	# You should have received a copy of the GNU General Public License along with
	18	# PALM. If not, see <http://www.gnu.org/licenses/>.
	19	#
	20	# Copyright 1997-2012 Leibniz University Hannover
	21	#--------------------------------------------------------------------------------#
	22	#
	23	# Current revisions:
[1090]	24	# ------------------
[1094]	25	# new option -P for explicit setting of ssh/scp port
[1046]	26	#
	27	# Former revisions:
	28	# -----------------
[169]	29	# $Id: subjob 1094 2013-02-03 01:52:12Z raasch $
[1047]	30	#
[1091]	31	# 2013-02-02 07:06:13Z raasch
	32	# adjustments for Kyushu-University computing center (lckyut)
	33	# old changelog messages removed
	34	#
[1047]	35	# 1046 2012-11-09 14:38:45Z maronga
	36	# code put under GPL (PALM 3.9)
	37	#
[1090]	38	# 08/07/94 - Siggi - first version finished
	39	# 29/06/94 - Siggi - script development started
	40	#--------------------------------------------------------------------------------#
	41	# subjob - script for automatic generation and submission of batch-job files
	42	# for various batch queuing systems
	43	#--------------------------------------------------------------------------------#
[1]	44
	45
	46	# VARIABLENVEREINBARUNGEN + DEFAULTWERTE
[352]	47	delete_dayfile=false
[799]	48	email_notification=none
[122]	49	group_number=none
[1]	50	locat=normal
	51	no_default_queue=none
	52	no_submit=false
	53	job_catalog="~/job_queue"
	54	job_name=none
	55	local_user=$LOGNAME
	56	node_usage=shared
[475]	57	numprocs=0
[1]	58	punkte="..........................................................."
	59	submcom=qsub
	60	queue=default
	61	remote_host=none
	62	remote_user=""
	63	verify=true
	64
	65	typeset -i cputime=0 memory=0 Memory=0 minuten resttime sekunden stunden
[696]	66	typeset -i inumprocs mpi_tasks=0 nodes=0 processes_per_node=0 tasks_per_node=0 threads_per_task=1
[1]	67	typeset -L20 spalte1
	68	typeset -R40 spalte2
	69	typeset -L60 spalte3
	70
	71
	72
	73	# FEHLERBEHANDLUNG
	74	# BEI EXIT:
	75	trap 'if [[ $locat != normal ]]
	76	then
	77	case $locat in
	78	(option) printf "\n --> available optios can be displayed"
	79	printf " by typing:"
	80	printf "\n \"subjob ?\" \n";;
	81	(ftpcopy\|parameter\|scp\|verify) printf "\n";;
	82	(*) printf "\n +++ unknown error"
	83	printf "\n please inform S. Raasch!\n"
	84	esac
	85	[[ -f $job_to_send ]] && rm $job_to_send
	86	printf "\n\n+++ SUBJOB killed \n\n"
	87	fi' exit
	88
	89
	90	# BEI TERMINAL-BREAK:
	91	trap '[[ -f $job_to_send ]] && rm $job_to_send
	92	printf "\n\n+++ SUBJOB killed \n\n"
	93	exit
	94	' 2
	95
	96
	97
	98
	99	# LOKALEN HOSTNAMEN FESTSTELLEN
	100	local_host=$(hostname)
	101
	102
	103
	104	# HOSTSPEZIFISCHE VARIABLEN VEREINBAREN BZW. PRUEFEN, OB LOKALER HOST
	105	# UEBERHAUPT ZULAESSIG IST
[717]	106	# Note: One of the entries for "lck" or "lckordi" always has to be
	107	# comment out, because the hostname (node*) is same for both machines
[1]	108	case $local_host in
	109	(atmos) local_addres=172.20.25.35; local_host=lcide;;
[102]	110	(autan) local_addres=130.75.105.57; local_host=lcmuk;;
[5]	111	(bora) local_addres=130.75.105.103; local_host=lcmuk;;
[400]	112	(bd1) local_addres=130.73.232.64; local_host=lcsgib;;
	113	(bd2) local_addres=130.73.232.65; local_host=lcsgib;;
	114	(bd3) local_addres=130.73.232.66; local_host=lcsgib;;
	115	(bd4) local_addres=130.73.232.67; local_host=lcsgib;;
	116	(b01*\|bicegate1) local_addres=130.73.232.102; local_host=lcsgib;;
[291]	117	(bicegate2) local_addres=130.73.232.103; local_host=lcsgib;;
[749]	118	(blizzard1) local_addres=136.172.40.15; local_host=ibmh;;
[12]	119	(breva) local_addres=130.75.105.98; local_host=lcmuk;;
[372]	120	(caurus) local_addres=130.75.105.19; local_host=lcmuk;;
[693]	121	(climate*) local_addres=165.132.26.68; local_host=lcyon;;
[108]	122	(compute-*.local) local_addres=172.20.4.2; local_host=lcfimm;;
[1]	123	(cs*) local_addres=136.172.44.131; local_host=nech;;
[5]	124	(elephanta) local_addres=130.75.105.6; local_host=lcmuk;;
[108]	125	(fimm.bccs.uib.no) local_addres=172.20.4.2; local_host=lcfimm;;
[367]	126	(node*) local_addres=165.132.26.61 local_host=lck;;
[717]	127	# (node*) local_addres=210.219.61.8 local_host=lckordi;;
[693]	128	(gaia*) local_addres=150.183.146.24; local_host=ibmkisti;;
[101]	129	(gallego) local_addres=130.75.105.10; local_host=lcmuk;;
[1]	130	(gfdl5) local_addres=165.132.26.58; local_host=ibmy;;
	131	(gfdl3.yonsei.ac.kr) local_addres=165.132.26.56; local_host=decalpha;;
[5]	132	(gregale) local_addres=130.75.105.109; local_host=lcmuk;;
	133	(hababai) local_addres=130.75.105.108; local_host=lcmuk;;
[892]	134	(hexagon.bccs.uib.no) local_addres=129.177.20.113; local_host=lcxe6;;
[400]	135	(hd1) local_addres=130.75.4.104; local_host=lcsgih;;
	136	(hd2) local_addres=130.75.4.105; local_host=lcsgih;;
	137	(hd3) local_addres=130.75.4.106; local_host=lcsgih;;
	138	(hd4) local_addres=130.75.4.107; local_host=lcsgih;;
[739]	139	(hicegate0) local_addres=130.75.4.101; local_host=lcsgih;;
[292]	140	(h01*\|hicegate1) local_addres=130.75.4.102; local_host=lcsgih;;
[210]	141	(hicegate2) local_addres=130.75.4.103; local_host=lcsgih;;
[440]	142	(hx*) local_addres=133.3.51.11; local_host=lckyoto;;
[749]	143	(inferno) local_addres=130.75.105.5; local_host=lcmuk;;
[5]	144	(irifi) local_addres=130.75.105.104; local_host=lcmuk;;
[407]	145	(sno) local_addres=130.75.105.113; local_host=lcmuk;;
[5]	146	(levanto) local_addres=130.75.105.45; local_host=lcmuk;;
[1040]	147	(login*) local_addres=118.128.66.223; local_host=lckiaps;;
[5]	148	(maestro) local_addres=130.75.105.2; local_host=lcmuk;;
[437]	149	(meteo-login*) local_addres=193.166.211.144;local_host=lcxt5m;;
[892]	150	(hexagon*) local_addres=129.177.20.113; local_host=lcxe6;;
[1]	151	(nobel*) local_addres=150.183.5.101; local_host=ibms;;
[5]	152	(orkan) local_addres=130.75.105.3; local_host=lcmuk;;
	153	(ostria) local_addres=130.75.105.106; local_host=lcmuk;;
[205]	154	(paesano) local_addres=130.75.105.46; local_host=lcmuk;;
[789]	155	(pingui) local_addres=134.106.74.118; local_host=lcfor;;
[5]	156	(quanero) local_addres=130.75.105.107; local_host=lcmuk;;
[622]	157	(rte*) local_addres=133.5.185.60; local_host=lcrte;;
[1]	158	(scirocco) local_addres=172.20.25.41; local_host=lcmuk;;
[799]	159	(solano) local_addres=130.75.105.110; local_host=lcmuk;;
[1090]	160	(sugoka*) local_addres=172.31.120.1; local_host=lckyut;;
[1]	161	(sun1\|sun2) local_addres=130.75.6.1; local_host=unics;;
[259]	162	(sx-*) local_addres=172.16.1.131; local_host=necriam;;
[181]	163	(r1*) local_addres=130.75.4.102; local_host=lcsgih;;
[196]	164	(r2*) local_addres=130.73.232.102; local_host=lcsgib;;
[635]	165	(t2a*) local_addres=10.1.6.165; local_host=lctit;;
[1021]	166	(urban*) local_addres=147.46.30.151 local_host=lcsb;;
[1]	167	(vorias) local_addres=172.20.25.43; local_host=lcmuk;;
[622]	168	(*.cc.kyushu-u.ac.jp) local_addres=133.5.4.129; local_host=ibmku;;
[1]	169	(*) printf "\n +++ \"$local_host\" unknown";
	170	printf "\n please inform S. Raasch!";
	171	locat=parameter; exit;;
	172	esac
	173
	174
	175
	176	# REMOTE HOST DEFAULTMAESSIG = LOCAL HOST SETZEN
	177	remote_host=$local_host
	178
	179
	180
	181
	182	# PROZEDUROPTIONEN EINLESEN
[1094]	183	while getopts :c:dDe:g:h:m:n:N:O:P:q:t:T:u:vX: option
[1]	184	do
	185	case $option in
	186	(c) job_catalog=$OPTARG;;
	187	(d) delete_dayfile=true;;
	188	(D) no_submit=true;;
[352]	189	(e) email_notification=$OPTARG;;
[125]	190	(g) group_number=$OPTARG;;
[1]	191	(h) remote_host=$OPTARG;;
	192	(m) memory=$OPTARG;;
	193	(n) job_name=$OPTARG;;
	194	(N) node_usage=$OPTARG;;
	195	(O) threads_per_task=$OPTARG;;
[1094]	196	(P) scp_port=$OPTARG;;
[1]	197	(q) no_default_queue=$OPTARG;;
	198	(t) cputime=$OPTARG;;
	199	(T) tasks_per_node=$OPTARG;;
	200	(u) remote_user=$OPTARG;;
	201	(v) verify=false;;
	202	(X) numprocs=$OPTARG;;
	203	(\?) printf "\n +++ Option $OPTARG unknown \n";
	204	locat=option; exit;;
	205	esac
	206	done
	207
	208
	209	# JOBDATEINAMEN ALS NAECHSTES ARGUMENT HOLEN
	210	shift OPTIND-1; file_to_send=$1
	211
	212
	213	# KURZE AUFRUFBESCHREIBUNG WIRD HIER AUSGEGEBEN
	214	if [ "$1" = "?" ]
	215	then
	216	(printf "\n *** subjob can be called as follows:\n"
	217	printf "\n subjob -c.. -d -D -h.. -m.. -q.. -t.. -u.. -v <jobfile>\n"
	218	printf "\n Description of available options:\n"
	219	printf "\n Option Description Default-Value"
	220	printf "\n -c job-input- and output-catalog ~/job_queue"
	221	printf "\n -d no job-protocol will be created ---"
	222	printf "\n -D only the job-file will be created ---"
	223	printf "\n -h execution host, available hosts: $remote_host"
[693]	224	printf "\n ibm, ibmh, ibmkisti, ibmku, ibms, ibmy, lc...,"
[1040]	225	printf "\n lckiaps, lctit, nech, necriam, unics"
[1]	226	printf "\n -m memory demand per process in MByte ---"
	227	printf "\n -n jobname <jobdatei>"
	228	printf "\n -O threads per task (for OpenMP usage) 1"
[1094]	229	printf "\n -P ssh/scp port default port"
[1]	230	printf "\n -q job-queue to be used default"
	231	printf "\n -t allowed cpu-time in seconds ---"
	232	printf "\n -T tasks per node (on parallel hosts) ---"
	233	printf "\n -u username on execution host from .netrc"
	234	printf "\n -v no prompt for confirmation ---"
	235	printf "\n -X # of processors (on parallel hosts) 1"
	236	printf "\n "
	237	printf "\n The only possible positional parameter is <jobfile>:"
	238	printf "\n The complete NQS-job must be provided here."
	239	printf "\n <jobfile>=? creates this outline\n\n") \| more
	240	exit
	241	fi
	242
	243
	244
	245	# PRUEFEN, OB JOBDATEI ANGEGEBEN WURDE UND OB SIE AUCH EXISTIERT
	246	if [[ "$file_to_send" = "" ]]
	247	then
	248	printf "\n +++ job-file missing"
	249	locat=parameter; exit
	250	else
	251	if [[ -f $file_to_send ]]
	252	then
	253	true
	254	else
	255	printf "\n +++ job-file: "
	256	printf "\n $file_to_send"
	257	printf "\n does not exist"
	258	locat=parameter; exit
	259	fi
	260	fi
	261
	262
	263
	264	# FALLS KEIN JOBNAME ANGEGEBEN WURDE, WIRD JOBNAME = JOBDATEINAME
	265	# GESETZT. VORAUSSETZUNG: JOBDATEINAME BEINHALTET KEINE PFADE
	266	if [[ $job_name = none ]]
	267	then
	268	job_name=$file_to_send
	269	fi
	270	if [[ $(echo $job_name \| grep -c "/") != 0 ]]
	271	then
	272	printf "\n +++ job-file name: "
	273	printf "\n $job_name"
	274	printf "\n must not contain \"/\"-characters"
	275	locat=parameter; exit
	276	fi
	277
	278
	279
	280
	281	# HOSTSPEZIFISCHE GROESSEN VEREINBAREN BZW. ABBRUCH BEI UNZULAESSIGEM HOST
	282	# ODER WENN HOST NICHT ANGEGEBEN WURDE
	283	if [[ $remote_host = none ]]
	284	then
	285	printf "\n +++ host missing"
	286	locat=option; exit
	287	else
	288	case $remote_host in
[251]	289	(ibm) queue=p690_standard; remote_addres=134.76.99.81; submcom=/usr/lpp/LoadL/full/bin/llsubmit;;
[312]	290	(ibmh) queue=no_class; remote_addres=136.172.40.15; submcom=/usr/lpp/LoadL/full/bin/llsubmit;;
[693]	291	(ibmkisti) queue=class.32plus; remote_addres=150.183.146.24; submcom=/usr/lpp/LoadL/full/bin/llsubmit;;
[622]	292	(ibmku) queue=s4; remote_addres=133.5.4.129; submcom=/usr/local/bin/llsubmit;;
[251]	293	(ibms) queue=p_normal; remote_addres=150.183.5.101; submcom=/usr/lpp/LoadL/full/bin/llsubmit;;
	294	(ibmy) queue=parallel; remote_addres=165.132.26.58; submcom=/usr/lpp/LoadL/full/bin/llsubmit;;
	295	(lcfimm) remote_addres=172.20.4.2; submcom=/opt/torque/bin/qsub;;
[440]	296	(lckyoto) remote_addres=133.3.51.11; submcom=/thin/local/bin/qsub;;
[540]	297	(lcsgib) queue=smallq; remote_addres=130.73.232.104; submcom=/opt/moab/bin/msub;;
	298	(lcsgih) queue=smallq; remote_addres=130.75.4.101; submcom=/opt/moab/bin/msub;;
[367]	299	(lck) remote_addres=165.132.26.61; submcom=/usr/torque/bin/qsub;;
[1040]	300	(lckiaps) remote_addres=118.128.66.223; submcom=/cm/shared/apps/pbspro/11.0.2.110766/bin/qsub;;
[717]	301	(lckordi) remote_addres=210.219.61.8; submcom=/usr/torque/bin/qsub;;
[1090]	302	(lckyut) remote_addres=133.5.4.37; submcom=/usr/bin/pjsub;;
[1021]	303	(lcsb) remote_addres=147.46.30.151; submcom=/usr/torque/bin/qsub;;
[635]	304	(lctit) queue=S; remote_addres=10.1.6.165; submcom=/opt/pbs/tools/bin/t2sub;;
[892]	305	(lcxe6) remote_addres=129.177.20.113; submcom=/opt/torque/2.5.10/bin/qsub;;
[437]	306	(lcxt5m) remote_addres=193.166.211.144; submcom=/opt/pbs/10.1.0.91350/bin/qsub;;
[693]	307	(lcyon) remote_addres=165.132.26.68; submcom=/usr/torque/bin/qsub;;
[251]	308	(nech) qsubmem=memsz_job; qsubtime=cputim_job; remote_addres=136.172.44.147; submcom="/usr/local/bin/qsub";;
	309	(necriam) qsubmem=memsz_job; qsubtime=cputim_job; remote_addres=172.16.1.131; submcom="/usr/bin/nqsII/qsub";;
	310	(vpp) qsubmem=m; qsubtime=t; queue=vpp; remote_addres=130.75.4.130;;
	311	(unics) qsubmem=d; qsubtime=t; queue=unics; remote_addres=130.75.6.1;;
	312	(*) printf "\n +++ hostname \"$remote_host\" not allowed";
	313	locat=parameter; exit;;
[1]	314	esac
	315	fi
	316
	317
	318	# EVTL. PRUEFEN, OB ANGEGEBENE QUEUE ZULAESSIG IST
	319	if [[ $no_default_queue != none ]]
	320	then
	321	error=false
	322	ndq=$no_default_queue
	323	case $remote_host in
	324	(ibm) case $ndq in
	325	(p690_express\|p690_standard\|p690_long) error=false;;
	326	(*) error=true;;
	327	esac;;
	328	(ibmh) case $ndq in
[312]	329	(no_class) error=false;;
[1]	330	(*) error=true;;
	331	esac;;
[693]	332	(ibmkisti) case $ndq in
	333	(class.32plus\|class.1-2\|class.2-32) error=false;;
	334	(*) error=true;;
	335	esac;;
[622]	336	(ibmku) case $ndq in
	337	(sdbg1\|sdbg2\|sdbg4\|s4\|s16\|s32\|s32-s) error=false;;
	338	(*) error=true;;
	339	esac;;
[1]	340	(ibms) case $ndq in
	341	(express\|normal\|p_express\|p_normal\|p_normal_1.3\|p_normal_1.7\|grand) error=false;;
	342	(*) error=true;;
	343	esac;;
	344	(ibmy) case $ndq in
	345	(parallel) error=false;;
	346	(*) error=true;;
	347	esac;;
[1040]	348	(lckiaps) case $ndq in
	349	(express\|normal) error=false;;
	350	(*) error=true;;
	351	esac;;
[440]	352	(lckyoto) case $ndq in
	353	(eh\|ph) error=false;;
	354	(*) error=true;;
	355	esac;;
[1090]	356	(lckyut) case $ndq in
	357	(cx-dbg\|cx-single\|cx-small\|cx-middle\|cx-large) error=false;;
	358	(*) error=true;;
	359	esac;;
[191]	360	(lcsgib\|lcsgih) case $ndq in
[416]	361	(testq\|serialq\|smallq\|mediumq\|bigq\|workq\|dataq\|permq\|special1q) error=false;;
[191]	362	(*) error=true;;
	363	esac;;
[1]	364	(lctit) case $ndq in
[635]	365	(G\|L128\|L256\|L512H\|S\|S96\|V) error=false;;
[1]	366	(*) error=true;;
	367	esac;;
	368	(t3eb) case $ndq in
	369	(berte\|p50\|p100\|p392\|forfree\|p25himem) error=false;;
	370	(*) error=true;;
	371	esac;;
[251]	372	(necriam) case $ndq in
[253]	373	(SP\|SS\|P6) error=false;;
[251]	374	(*) error=true;;
	375	esac;;
[1]	376	(t3eh) case $ndq in
	377	(para_t3e\|em\|k\|l\|lm\|comp_t3e\|c\|p\|ht) error=false;;
	378	(*) error=true;;
	379	esac;;
	380	(t3ej2\|t3ej5) case $ndq in
	381	(low\|normal\|high) error=false;;
	382	(*) error=true;;
	383	esac;;
	384	(t3es) case $ndq in
	385	(batch\|serial-4\|pe4\|p48\|pe16\|pe32\|pe64\|pe128) error=false;;
	386	(*) error=true;;
	387	esac;;
	388	(unics) case $ndq in
	389	(unics\|ht) error=false;;
	390	(*) error=true;;
	391	esac;;
	392	esac
	393	if [[ $error = true ]]
	394	then
	395	printf "\n +++ queue \"$no_default_queue\" on host \"$remote_host\" not allowed"
	396	locat=parameter; exit
	397	else
	398	queue=$no_default_queue
	399	fi
	400	fi
	401
	402
	403
	404	# PRUEFEN DER CPU-ZEIT, ZEIT NACH STUNDEN, MINUTEN UND SEKUNDEN
	405	# AUFTEILEN
	406	done=false
	407	while [[ $done = false ]]
	408	do
	409	if (( $cputime <= 0 ))
	410	then
	411	printf "\n +++ wrong cpu-time or cpu-time missing"
	412	printf "\n >>> Please type cpu-time in seconds as INTEGER:"
	413	printf "\n >>> "
	414	read cputime 1>/dev/null 2>&1
	415	else
	416	done=true
	417	fi
	418	done
	419	if [[ $remote_host = nech ]]
	420	then
	421	if (( tasks_per_node != 0 ))
	422	then
	423	(( cputime = cputime * tasks_per_node ))
	424	elif [[ $numprocs != 0 ]]
	425	then
	426	(( cputime = cputime * numprocs ))
	427	fi
	428	fi
	429	(( stunden = cputime / 3600 ))
	430	(( resttime = cputime - stunden * 3600 ))
	431	(( minuten = resttime / 60 ))
	432	(( sekunden = resttime - minuten * 60 ))
	433	timestring=${stunden}:${minuten}:${sekunden}
	434
	435
	436
	437	# PRUEFEN DER KERNSPEICHERANFORDERUNG
	438	done=false
	439	while [[ $done = false ]]
	440	do
	441	if (( memory <= 0 ))
	442	then
	443	printf "\n +++ wrong memory demand or memory demand missing"
	444	printf "\n >>> Please type memory in MByte per process as INTEGER:"
	445	printf "\n >>> "
	446	read memory 1>/dev/null 2>&1
	447	else
	448	done=true
	449	fi
	450	done
	451
[251]	452	if [[ $remote_host = nech \|\| $remote_host = necriam ]]
[1]	453	then
	454	if (( tasks_per_node != 0 ))
	455	then
	456	(( Memory = memory * tasks_per_node / 1000 ))
	457	elif [[ $numprocs != 0 ]]
	458	then
	459	(( Memory = memory * numprocs / 1000 ))
	460	else
	461	(( Memory = memory / 1000 ))
	462	fi
[635]	463	elif [[ $remote_host = lctit ]]
	464	then
	465	(( Memory = memory * tasks_per_node / 1000 ))
[1]	466	fi
	467
	468
	469	# SPEICHERBERECHNUNG BEI OPENMP-NUTZUNG
	470	if [[ $(echo $remote_host \| cut -c1-3) = ibm ]]
	471	then
	472	(( memory = memory * threads_per_task ))
	473	fi
	474
	475
	476	# BERECHNUNG DER ANZAHL DER ZU VERWENDENDEN KNOTEN
	477	if (( tasks_per_node != 0 ))
	478	then
[622]	479	(( nodes = numprocs / ( tasks_per_node * threads_per_task ) ))
[1]	480	fi
	481
[1094]	482
[622]	483	# Calculate number of processes per node
	484	(( processes_per_node = tasks_per_node * threads_per_task ))
[1]	485
[1094]	486
[696]	487	# Calculate number of MPI tasks
	488	(( mpi_tasks = numprocs / threads_per_task ))
[1]	489
[696]	490
[1094]	491	# Set port number option for calls of ssh/scp, subjob and batch_scp scripts
	492	if [[ "$scp_port" != "" ]]
	493	then
	494	PORTOPT="-P $scp_port"
	495	SSH_PORTOPT="-p $scp_port"
	496	fi
	497
	498
[1]	499	# HEADER-AUSGABE
	500	if [[ $verify = true ]]
	501	then
	502	printf "\n\n"
	503	printf "#--------------------------------------------------------------# \n"
	504	spalte1=SUBJOB;spalte2=$(date)
	505	printf "\| $spalte1$spalte2 \| \n"
	506	printf "\| \| \n"
	507	printf "\| values of parameters/options: \| \n"
	508	spalte1=local_host$punkte; spalte2=$punkte$local_host
	509	printf "\| $spalte1$spalte2 \| \n"
	510	spalte1=remote_host$punkte; spalte2=$punkte$remote_host
	511	printf "\| $spalte1$spalte2 \| \n"
	512	spalte1=queue$punkte; spalte2=$punkte$queue
	513	printf "\| $spalte1$spalte2 \| \n"
	514	spalte1=memory$punkte; spalte2="$punkte$memory mb"
	515	printf "\| $spalte1$spalte2 \| \n"
	516	spalte1=cputime$punkte; spalte2="$punkte$cputime sec"
	517	printf "\| $spalte1$spalte2 \| \n"
	518	spalte1=job_name$punkte; spalte2="$punkte$job_name"
	519	printf "\| $spalte1$spalte2 \| \n"
	520	printf "#--------------------------------------------------------------# \n\n"
	521
	522
	523	# KONTROLLABFRAGE, OB ALLES O.K.
	524	antwort="dummy"
	525	while [[ $antwort != y && $antwort != Y && $antwort != n && $antwort != N ]]
	526	do
	527	read antwort?" >>> continue (y/n) ? "
	528	done
	529	if [[ $antwort = n \|\| $antwort = N ]]
	530	then
	531	locat=verify; exit
	532	fi
	533	printf "\n"
	534	fi
	535
	536
	537
	538	# ZUFALLSKENNUNG GENERIEREN UND JOBNAMEN AUF ZIELRECHNER BESTIMMEN
	539	kennung=$RANDOM
	540	job_on_remhost=${job_name}_${kennung}_$local_host
	541	job_to_send=job_to_send_$kennung
	542	if [[ $delete_dayfile = false ]]
	543	then
	544	remote_dayfile=${local_host}_${job_name}_result_$kennung
	545	local_dayfile=${remote_host}_${job_name}
	546	else
	547	remote_dayfile=/dev/null
	548	fi
	549
	550
	551
[622]	552	# Generate the batch job scripts (qsub/msub/LoadLeveler)
[1]	553	if [[ $(echo $remote_host \| cut -c1-3) = ibm && $numprocs != 0 ]]
	554	then
	555
[622]	556	# General LoadLeveler settings
	557	execute_in_shell="#!/bin/ksh"
	558	use_shell="# @ shell = /bin/ksh"
	559	consumable_memory="ConsumableMemory($memory mb)"
	560	class="# @ class = $queue"
	561	environment="# @ environment = OMP_NUM_THREADS=$threads_per_task; MP_SHARED_MEMORY=yes"
	562	network_to_use="# @ network.mpi = sn_all,shared,us"
	563	data_limit="# @ data_limit = 1.76gb"
	564	image_size="# @ image_size = 50"
[693]	565	wall_clock_limit="# @ wall_clock_limit = ${timestring},$timestring"
[312]	566
[693]	567	if [[ $email_notification = none ]]
	568	then
	569	notify_user=""
	570	else
	571	notify_user="# @ notify_user = $email_notification"
	572	if [[ $delete_dayfile = true ]]
	573	then
	574	notification='# @ notification = never'
	575	fi
	576	fi
[622]	577
[312]	578	if [[ $remote_host = ibmh ]]
[1]	579	then
[312]	580	data_limit=""
	581	network_to_use=""
	582	class=""
	583	environment=""
[814]	584	rset="# @ rset = RSET_MCM_AFFINITY"
	585	task_affinity="# @ task_affinity = core(1)"
[693]	586	elif [[ $remote_host = ibmkisti ]]
	587	then
	588	network_to_use="# @ network.MPI = sn_all,shared,US"
	589	wall_clock_limit="# @ wall_clock_limit = $timestring"
[696]	590	if [[ $threads_per_task = 1 ]]
	591	then
	592	rset="# @ rset = RSET_MCM_AFFINITY"
	593	mcm_affinity_options="# @ mcm_affinity_options = mcm_mem_pref mcm_sni_none mcm_distribute"
	594	fi
[693]	595	environment=""
	596	use_shell=""
	597	data_limit=""
	598	image_size=""
[622]	599	elif [[ $remote_host = ibmku ]]
	600	then
	601	execute_in_shell="#!/usr/bin/ksh"
	602	use_shell="# @ shell = /usr/bin/ksh"
	603	consumable_memory=""
	604	environment=""
	605	network_to_use="# @ network.mpi = sn_all,shared,us"
	606	data_limit=""
	607	image_size=""
	608	elif [[ $remote_host = ibms ]]
	609	then
	610	network_to_use="# @ network.mpi = csss,shared,us"
	611	elif [[ $remote_host = ibmy ]]
	612	then
	613	consumable_memory=""
	614	network_to_use=""
[1]	615	fi
	616
	617	cat > $job_to_send << %%END%%
[622]	618	$execute_in_shell
	619	$use_shell
[1]	620
	621	# @ job_type = parallel
[693]	622	# @ job_name = $job_name
[1]	623	# @ resources = ConsumableCpus($threads_per_task) $consumable_memory
	624	# @ output = $remote_dayfile
	625	# @ error = $remote_dayfile
[693]	626	$wall_clock_limit
[622]	627	$image_size
[312]	628	$class
	629	$environment
[1]	630	$network_to_use
	631	$data_limit
[693]	632	$rset
	633	$mcm_affinity_options
[814]	634	$task_affinity
[1]	635	$notification
[693]	636	$notify_user
[1]	637
	638	%%END%%
	639
	640	if (( nodes > 0 ))
	641	then
	642
[693]	643	if [[ $remote_host != ibmkisti ]]
	644	then
	645
	646	cat >> $job_to_send << %%END%%
[1]	647	# @ node = $nodes
[622]	648	# @ tasks_per_node = $processes_per_node
[1]	649	# @ node_usage = $node_usage
	650	# @ queue
	651
	652	%%END%%
	653
[693]	654	else
	655
	656	cat >> $job_to_send << %%END%%
[696]	657	# @ total_tasks = $mpi_tasks
[693]	658	# @ blocking = unlimited
	659	# @ queue
	660
	661	%%END%%
	662
	663	fi
	664
[1]	665	else
	666
	667	if [[ $remote_host != ibmy ]]
	668	then
	669
	670	cat >> $job_to_send << %%END%%
	671	# @ blocking = unlimited
	672	# @ total_tasks = $numprocs
	673	# @ node_usage = $node_usage
	674	# @ queue
	675
	676	%%END%%
	677
	678	else
	679
	680	cat >> $job_to_send << %%END%%
	681	# @ node = 1
	682	# @ total_tasks = $numprocs
	683	# @ queue
	684
	685	%%END%%
	686
	687	fi
	688
	689	fi
	690
[696]	691	# workaround because of silly job filter on ibmkisti
	692	if [[ $remote_host = ibmkisti && $threads_per_task != 1 ]]
	693	then
	694	echo "export OMP_NUM_THREADS=$threads_per_task" >> $job_to_send
	695	fi
	696
[1]	697	elif [[ $(echo $remote_host \| cut -c1-3) = ibm && $numprocs = 0 ]]
	698	then
	699
	700	cat > $job_to_send << %%END%%
	701	#!/bin/ksh
	702
	703	# @ job_type = serial
	704	# @ node_usage = $node_usage
	705	# @ job_name = palm
	706	# @ wall_clock_limit = ${timestring},$timestring
	707	# @ resources = ConsumableCpus(1) ConsumableMemory(1 gb)
	708	# @ output = $remote_dayfile
	709	# @ error = $remote_dayfile
[312]	710	$class
[1]	711	$notification
	712
	713	# @ queue
	714
	715	%%END%%
	716
[108]	717	elif [[ $remote_host = lcfimm ]]
	718	then
	719
	720	if [[ $numprocs != 0 ]]
	721	then
	722	cat > $job_to_send << %%END%%
	723	#!/bin/ksh
	724	#PBS -N $job_name
[552]	725	#PBS -A $project_account
[108]	726	#PBS -l walltime=$timestring
[622]	727	#PBS -l nodes=${nodes}:ppn=$processes_per_node
[108]	728	#PBS -l pmem=${memory}mb
	729	#PBS -m abe
	730	#PBS -o $remote_dayfile
	731	#PBS -j oe
	732	mpd &
	733
	734	%%END%%
	735
[168]	736	else
	737	cat > $job_to_send << %%END%%
	738	#!/bin/ksh
	739	#PBS -N $job_name
[552]	740	#PBS -A $project_account
[168]	741	#PBS -l walltime=$timestring
	742	#PBS -l ncpus=1
	743	#PBS -l pmem=${memory}mb
	744	#PBS -m abe
	745	#PBS -o $remote_dayfile
	746	#PBS -j oe
	747
	748	%%END%%
	749
	750	fi
	751
[1021]	752	elif [[ $remote_host = lck \|\| $remote_host = lckordi \|\| $remote_host = lcsb ]]
[368]	753	then
	754
	755	if [[ $numprocs != 0 ]]
	756	then
	757	cat > $job_to_send << %%END%%
	758	#!/bin/ksh
	759	#PBS -N $job_name
	760	#PBS -l walltime=$timestring
	761	#PBS -l ncpus=$numprocs
	762	#PBS -l pmem=${memory}mb
	763	#PBS -o $remote_dayfile
[1021]	764	#PBS -l nodes=$nodes:ppn=${processes_per_node}
[368]	765	#PBS -j oe
	766
	767	mpd &
	768
	769	%%END%%
	770
	771	else
	772	cat > $job_to_send << %%END%%
	773	#!/bin/ksh
	774	#PBS -N $job_name
	775	#PBS -l walltime=$timestring
	776	#PBS -l ncpus=1
	777	#PBS -l pmem=${memory}mb
	778	#PBS -o $remote_dayfile
	779	#PBS -j oe
	780
	781	%%END%%
	782
	783	fi
	784
[1040]	785	elif [[ $remote_host = lckiaps ]]
	786	then
	787
	788	if [[ $numprocs != 0 ]]
	789	then
	790	cat > $job_to_send << %%END%%
	791	#!/bin/ksh
	792	#PBS -N $job_name
	793	#PBS -l walltime=$timestring
	794	#PBS -l select=1:ncpus=$numprocs
	795	#PBS -l pmem=${memory}mb
	796	#PBS -q $queue
	797	#PBS -o $remote_dayfile
	798	#PBS -j oe
	799	#PBS -V
	800
	801	%%END%%
	802
	803	else
	804	cat > $job_to_send << %%END%%
	805	#!/bin/ksh
	806	#PBS -N $job_name
	807	#PBS -l walltime=$timestring
	808	#PBS -l ncpus=1
	809	#PBS -l pmem=${memory}mb
	810	#PBS -o $remote_dayfile
	811	#PBS -j oe
	812
	813	%%END%%
	814
	815	fi
	816
[693]	817	elif [[ $remote_host = lcyon ]]
	818	then
	819
	820	if [[ $numprocs != 0 ]]
	821	then
	822	cat > $job_to_send << %%END%%
	823	#!/bin/ksh
	824	#PBS -N $job_name
	825	#PBS -l walltime=$timestring
	826	#PBS -l ncpus=$numprocs
	827	#PBS -l pmem=${memory}mb
	828	#PBS -o $remote_dayfile
	829	#PBS -j oe
	830
	831	%%END%%
	832
	833	else
	834	cat > $job_to_send << %%END%%
	835	#!/bin/ksh
	836	#PBS -N $job_name
	837	#PBS -l walltime=$timestring
	838	#PBS -l ncpus=1
	839	#PBS -l pmem=${memory}mb
	840	#PBS -o $remote_dayfile
	841	#PBS -j oe
	842
	843	%%END%%
	844
	845	fi
	846
[181]	847	elif [[ $remote_host = lcsgih \|\| $remote_host = lcsgib ]]
[179]	848	then
	849
[376]	850	if [[ "$sgi_feature" != "" ]]
	851	then
	852	feature_directive="#PBS -l feature=$sgi_feature"
	853	else
	854	feature_directive=""
	855	fi
[799]	856
[416]	857	if [[ $queue = dataq \|\| $queue = permq ]]
[399]	858	then
	859	feature_directive="#PBS -l feature=data"
	860	fi
[376]	861
[789]	862	if [[ $queue = testq \|\| $queue = mediumq \|\| $queue = bigq \|\| $queue = workq \|\| $queue = dataq \|\| $queue = permq \|\| $queue = serialq \|\| $queue = special1q ]]
[191]	863	then
	864	queue_directive="#PBS -q $queue"
	865	else
	866	queue_directive=""
	867	fi
	868
[352]	869	if [[ $email_notification = none ]]
	870	then
	871	email_directive=""
	872	else
	873	email_directive="#PBS -M $email_notification"
	874	fi
	875
[179]	876	if [[ $numprocs != 0 ]]
	877	then
	878	cat > $job_to_send << %%END%%
[181]	879	#!/bin/bash
[179]	880	#PBS -N $job_name
	881	#PBS -l walltime=$timestring
[622]	882	#PBS -l nodes=$nodes:ppn=${processes_per_node}
[181]	883	#PBS -l naccesspolicy=$node_usage
[179]	884	#PBS -o $remote_dayfile
	885	#PBS -j oe
[376]	886	$feature_directive
[191]	887	$queue_directive
[352]	888	$email_directive
[179]	889
[622]	890	eval \`/sw/swdist/bin/modulesinit\`
	891	#. /usr/share/modules/init/bash
[892]	892	$init_cmds
[493]	893	$module_calls
[374]	894
[181]	895	echo ld_library_path=\$LD_LIBRARY_PATH
[179]	896
	897	%%END%%
	898
	899	else
	900	cat > $job_to_send << %%END%%
	901	#PBS -S /bin/bash
	902	#PBS -N $job_name
	903	#PBS -l walltime=$timestring
	904	#PBS -l ncpus=1
	905	#PBS -o $remote_dayfile
[475]	906	#PBS -j oe
[400]	907	$queue_directive
	908	$email_directive
[179]	909
[622]	910	eval \`/sw/swdist/bin/modulesinit\`
	911	#. /usr/share/modules/init/bash
[892]	912	$init_cmds
[493]	913	$module_calls
[475]	914
[179]	915	%%END%%
	916
	917	fi
	918
[892]	919	elif [[ $remote_host = lcxe6 ]]
[164]	920	then
	921
	922	if [[ $numprocs != 0 ]]
	923	then
	924	cat > $job_to_send << %%END%%
[799]	925	#!/bin/ksh
[164]	926	#PBS -S /bin/ksh
	927	#PBS -N $job_name
[552]	928	#PBS -A $project_account
[206]	929	#PBS -j oe
[164]	930	#PBS -l walltime=$timestring
	931	#PBS -l mppwidth=${numprocs}
[622]	932	#PBS -l mppnppn=${processes_per_node}
[164]	933	#PBS -m abe
	934	#PBS -o $remote_dayfile
[492]	935	$email_directive
[164]	936
[892]	937	$init_cmds
[493]	938	$module_calls
[343]	939
[164]	940	%%END%%
	941
[108]	942	else
	943	cat > $job_to_send << %%END%%
	944	#!/bin/ksh
[168]	945	#PBS -S /bin/ksh
[108]	946	#PBS -N $job_name
[552]	947	#PBS -A $project_account
[206]	948	#PBS -j oe
[108]	949	#PBS -l walltime=$timestring
	950	#PBS -l ncpus=1
	951	#PBS -l pmem=${memory}mb
	952	#PBS -m abe
[492]	953	$email_directive
[108]	954	#PBS -o $remote_dayfile
	955
[892]	956	$init_cmds
[493]	957	$module_calls
[343]	958
[108]	959	%%END%%
	960
	961	fi
	962
[440]	963	elif [[ $remote_host = lckyoto ]]
[437]	964	then
	965
[440]	966	cat > $job_to_send << %%END%%
[799]	967	#!/bin/ksh
[440]	968	# @\$-o $remote_dayfile
	969	# @\$-eo -oi
	970	# @\$-lP 16
[799]	971	# @\$-lp 1
[440]	972	# @\$-lm 28gb -llm unlimited -ls unlimited
	973	# @\$-q $queue
	974	# @\$-Pvn abs_pack
	975	##for intel? @\$-Pvn abs_unpack -Pvs unpack -Pvc unpack
	976	#. /thin/local/etc/setprofile/intel-11.0.sh
	977	#. /thin/local/etc/setprofile/mvapich2-1.4+intel-11.0.sh
	978	. ~/.myprofile
	979	#. /home2/t/t51254/palm/current_version/myprofile
	980	#. /thin/apps/pgi/mpi.sh
	981	#
	982	env
	983	#
	984	set -x
	985
	986	%%END%%
	987
	988	elif [[ $remote_host = lcxt5m ]]
	989	then
	990
[437]	991	if [[ $numprocs != 0 ]]
	992	then
	993	cat > $job_to_send << %%END%%
[799]	994	#!/bin/ksh
[437]	995	#PBS -S /bin/ksh
	996	#PBS -N $job_name
	997	#PBS -j oe
	998	#PBS -l walltime=$timestring
	999	#PBS -l mppwidth=${numprocs}
[622]	1000	#PBS -l mppnppn=${processes_per_node}
[437]	1001	#PBS -m abe
	1002	#PBS -o $remote_dayfile
	1003
[892]	1004	$init_cmds
[493]	1005	$module_calls
[437]	1006
	1007	%%END%%
	1008
	1009	else
	1010	cat > $job_to_send << %%END%%
	1011	#!/bin/ksh
	1012	#PBS -S /bin/ksh
	1013	#PBS -N $job_name
	1014	#PBS -j oe
	1015	#PBS -l walltime=$timestring
	1016	#PBS -l ncpus=1
	1017	#PBS -l pmem=${memory}mb
	1018	#PBS -m abe
	1019	#PBS -o $remote_dayfile
	1020
[892]	1021	$init_cmds
[493]	1022	$module_calls
[437]	1023
	1024	%%END%%
	1025
	1026	fi
	1027
[1090]	1028	elif [[ $remote_host = lckyut ]]
	1029	then
	1030	cat > $job_to_send << %%END%%
	1031	#!/bin/bash
	1032	#PJM -L "vnode=$numprocs"
	1033	#PJM -L "vnode-core=1"
	1034	#PJM -L "rscgrp=$queue"
	1035	#PJM --no-stging
	1036	#PJM -L "elapse=$timestring"
	1037	#PJM --mpi proc=$numprocs
	1038	#PJM -o $remote_dayfile
	1039	#PJM -j
	1040
	1041	export LANG=en_US.UTF-8
	1042	%%END%%
	1043
[1]	1044	elif [[ $remote_host = nech ]]
	1045	then
	1046
	1047	if (( nodes > 1 ))
	1048	then
	1049	cat > $job_to_send << %%END%%
	1050	#!/bin/ksh
[622]	1051	#PBS -l cpunum_prc=$processes_per_node,cputim_job=$cputime
[1]	1052	#PBS -l ${qsubmem}=${Memory}gb
	1053	#PBS -b $nodes
	1054	#PBS -o $remote_dayfile
	1055	#PBS -N palm
	1056	#PBS -j o
	1057	#PBS -T mpisx
	1058
	1059	%%END%%
	1060
	1061	elif [[ $numprocs != 0 ]]
	1062	then
	1063	cat > $job_to_send << %%END%%
	1064	#!/bin/ksh
[622]	1065	#PBS -l cpunum_prc=$processes_per_node,cputim_job=$cputime
[1]	1066	#PBS -l ${qsubmem}=${Memory}gb
	1067	#PBS -o $remote_dayfile
	1068	#PBS -N palm
	1069	#PBS -j o
	1070
	1071	%%END%%
	1072
	1073	else
	1074	cat > $job_to_send << %%END%%
	1075	#!/bin/ksh
	1076	#PBS -l ${qsubmem}=${Memory}gb,${qsubtime}=$cputime
	1077	#PBS -o $remote_dayfile
	1078	#PBS -j o
	1079
	1080	%%END%%
	1081
	1082	fi
	1083
[251]	1084	elif [[ $remote_host = necriam ]]
[35]	1085	then
	1086
	1087	if (( nodes > 1 ))
	1088	then
	1089	cat > $job_to_send << %%END%%
	1090	#!/bin/ksh
	1091	#PBS -b $nodes
	1092	#PBS -o $remote_dayfile
[253]	1093	#PBS -N $job_name
[35]	1094	#PBS -j o
[251]	1095	#PBS -v MPIPROGINV=YES
[35]	1096
	1097	%%END%%
	1098
	1099	elif [[ $numprocs != 0 ]]
	1100	then
	1101	cat > $job_to_send << %%END%%
	1102	#!/bin/ksh
	1103	#PBS -q ${queue}
	1104	#PBS -o $remote_dayfile
[253]	1105	#PBS -N $job_name
[35]	1106	#PBS -j o
[251]	1107	#PBS -v MPIPROGINV=YES
[35]	1108
	1109	%%END%%
	1110
	1111	else
	1112	cat > $job_to_send << %%END%%
	1113	#!/bin/ksh
	1114	#PBS -o $remote_dayfile
	1115	#PBS -j o
	1116
	1117	%%END%%
	1118
	1119	fi
	1120
[1]	1121	elif [[ $remote_host = lctit ]]
	1122	then
	1123	cat > $job_to_send << %%END%%
[635]	1124	#!/bin/ksh
[892]	1125	$init_cmds
[678]	1126	$module_calls
	1127
[1]	1128	%%END%%
	1129
	1130	# OPTIONEN FUER SUBMIT-KOMMANDO ZUSAMMENSTELLEN
[678]	1131	if [[ $tasks_per_node != $processes_per_node ]]
	1132	then
	1133	submcom="$submcom -W group_list=$group_number -N $job_name -l walltime=$timestring -l select=$nodes:ncpus=$processes_per_node:mpiprocs=$tasks_per_node:mem=${Memory}gb -o $remote_dayfile -j oe -q $queue "
	1134	else
	1135	submcom="$submcom -W group_list=$group_number -N $job_name -l walltime=$timestring -l select=$nodes:ncpus=$processes_per_node:mpiprocs=$tasks_per_node:mem=${Memory}gb -l place=scatter -o $remote_dayfile -j oe -q $queue "
	1136	fi
[1]	1137
	1138	else
	1139
	1140	cat > $job_to_send << %%END%%
	1141	# @\$-q ${queue}
	1142	# @\$-l${qsubtime} $timestring
	1143	# @\$-l${qsubmem} ${memory}mb
	1144	# @\$-o $remote_dayfile
	1145	# @\$-eo
	1146
	1147	%%END%%
	1148
	1149	fi
	1150
	1151
	1152	# BEI RECHNUNG AUF REMOTE-MASCHINEN RUECKTRANSFER DES DAYFILES PER TRAP
	1153	# BEI EXIT VERANLASSEN
	1154	# VEKTORRECHNER MUSS EIGENEN JOB STARTEN, DA DORT NOHUP NICHT FUNKTIONIERT
	1155	# AUF IBM IN SEOUL IST RUECKTRANSFER ZUR ZEIT GENERELL NICHT MOEGLICH
	1156	if [[ $delete_dayfile = false && $remote_host != $local_host ]]
	1157	then
	1158	echo "set +vx" >> $job_to_send
	1159	echo "trap '" >> $job_to_send
	1160	echo "set +vx" >> $job_to_send
[1090]	1161	if [[ $(echo $remote_host \| cut -c1-3) = ibm \|\| $(echo $remote_host \| cut -c1-5) = lcsgi \|\| $(echo $remote_host \| cut -c1-3) = nec \|\| $remote_host = lckiaps \|\| $remote_host = lckyut ]]
[1]	1162	then
[622]	1163	if [[ $remote_host = ibmh ]]
[1]	1164	then
	1165	return_queue=c1
[693]	1166	elif [[ $remote_host = ibmkisti ]]
	1167	then
	1168	return_queue=class.1-2
[622]	1169	elif [[ $remote_host = ibmku ]]
	1170	then
	1171	return_queue=sdbg2
[1]	1172	elif [[ $remote_host = ibms ]]
	1173	then
	1174	return_queue=p_normal
	1175	elif [[ $remote_host = ibmy ]]
	1176	then
	1177	return_queue=serial
[325]	1178	elif [[ $remote_host = lcsgih \|\| $remote_host = lcsgib ]]
	1179	then
[326]	1180	return_queue=serialq
[251]	1181	elif [[ $remote_host = necriam ]]
[1]	1182	then
[253]	1183	return_queue=SP
[1040]	1184	elif [[ $remote_host = lckiaps ]]
	1185	then
	1186	return_queue=express
[1090]	1187	elif [[ $remote_host = lckyut ]]
	1188	then
	1189	return_queue=cx-single
[1]	1190	else
	1191	return_queue=unknown
	1192	fi
	1193
	1194	if [[ $(echo $remote_host \| cut -c1-3) = ibm ]]
	1195	then
	1196
[622]	1197	if [[ $remote_host = ibmku ]]
	1198	then
	1199	echo "echo \"#!/usr/bin/ksh\" >> scpjob.$kennung" >> $job_to_send
	1200	echo "echo \"# @ shell = /usr/bin/ksh\" >> scpjob.$kennung" >> $job_to_send
	1201	else
	1202	echo "echo \"#!/bin/ksh\" >> scpjob.$kennung" >> $job_to_send
	1203	fi
[1]	1204	echo "echo \"# @ job_type = serial\" >> scpjob.$kennung" >> $job_to_send
	1205	echo "echo \"# @ job_name = transfer\" >> scpjob.$kennung" >> $job_to_send
	1206	echo "echo \"# @ resources = ConsumableCpus(1) ConsumableMemory(1 gb)\" >> scpjob.$kennung" >> $job_to_send
	1207	echo "echo \"# @ wall_clock_limit = 00:10:00,00:10:00\" >> scpjob.$kennung " >> $job_to_send
	1208	echo "echo \"# @ output = job_queue/last_job_transfer_protocol\" >> scpjob.$kennung" >> $job_to_send
	1209	echo "echo \"# @ error = job_queue/last_job_transfer_protocol\" >> scpjob.$kennung" >> $job_to_send
[312]	1210	if [[ $host != "ibmh" ]]
	1211	then
	1212	echo "echo \"# @ class = $return_queue\" >> scpjob.$kennung" >> $job_to_send
	1213	fi
[1]	1214	echo "echo \"# @ image_size = 10\" >> scpjob.$kennung" >> $job_to_send
	1215	echo "echo \"# @ notification = never\" >> scpjob.$kennung" >> $job_to_send
	1216
	1217	echo "echo \"# @ queue\" >> scpjob.$kennung" >> $job_to_send
	1218	echo "echo \" \" >> scpjob.$kennung" >> $job_to_send
	1219
	1220	echo "echo \"set -x\" >> scpjob.$kennung" >> $job_to_send
[1094]	1221	echo "echo \"batch_scp $PORTOPT -d -w 10 -u $local_user $local_addres ${job_catalog}/$remote_dayfile \\\"$job_catalog\\\" $local_dayfile\" >> scpjob.$kennung" >> $job_to_send
[622]	1222	if [[ $remote_host = ibmku ]]
	1223	then
	1224	echo "echo \"rm scpjob.$kennung\" >> scpjob.$kennung" >> $job_to_send
	1225	fi
[1]	1226	echo "echo \"exit\" >> scpjob.$kennung" >> $job_to_send
	1227
	1228	elif [[ $remote_host = nech ]]
	1229	then
	1230	echo "cd /pf/b/${remote_user}/job_queue" >> $job_to_send
	1231	echo "cat > scpjob.$kennung << %%END%%" >> $job_to_send
	1232	echo "#PBS -l ${qsubmem}=1GB,${qsubtime}=100" >> $job_to_send
	1233	echo "#PBS -o last_job_transfer_protocol" >> $job_to_send
	1234	echo "#PBS -j o" >> $job_to_send
	1235	echo " " >> $job_to_send
	1236	echo "set -x" >> $job_to_send
	1237	echo "cd /pf/b/${remote_user}/job_queue" >> $job_to_send
[1094]	1238	echo "batch_scp $PORTOPT -d -w 10 -u $local_user $local_addres $remote_dayfile \"$job_catalog\" $local_dayfile" >> $job_to_send
[1]	1239	echo "[[ \"\$for_subjob_to_do\" != \"\" ]] && eval \$for_subjob_to_do" >> $job_to_send
	1240	echo "%%END%%" >> $job_to_send
	1241
[251]	1242	elif [[ $remote_host = necriam ]]
[35]	1243	then
	1244	echo "cat > scpjob.$kennung << %%END%%" >> $job_to_send
	1245	echo "#PBS -q $return_queue" >> $job_to_send
	1246	echo "#PBS -o last_job_transfer_protocol" >> $job_to_send
	1247	echo "#PBS -j o" >> $job_to_send
	1248	echo " " >> $job_to_send
	1249	echo "set -x" >> $job_to_send
[1094]	1250	echo "batch_scp $PORTOPT -d -w 10 -u $local_user $local_addres $remote_dayfile \"$job_catalog\" $local_dayfile" >> $job_to_send
[35]	1251	echo "[[ \"\$for_subjob_to_do\" != \"\" ]] && eval \$for_subjob_to_do" >> $job_to_send
	1252	echo "%%END%%" >> $job_to_send
	1253
[1090]	1254	elif [[ $remote_host = lckyut ]]
	1255	then
	1256	echo "cat > scpjob.$kennung << %%END%%" >> $job_to_send
	1257	echo "#!/bin/bash" >> $job_to_send
	1258	echo "#PJM -L \"vnode=1\"" >> $job_to_send
	1259	echo "#PJM -L \"rscgrp=$return_queue\"" >> $job_to_send
	1260	echo "#PJM --no-stging" >> $job_to_send
	1261	echo "#PJM -L \"elapse=30:00\"" >> $job_to_send
	1262	echo "#PJM -o \$HOME/job_queue/last_job_transfer_protocol" >> $job_to_send
	1263	echo "#PJM -j" >> $job_to_send
	1264	echo " " >> $job_to_send
	1265	echo "export LANG=en_US.UTF-8" >> $job_to_send
	1266	echo "set -x" >> $job_to_send
[1094]	1267	echo "batch_scp $PORTOPT -d -w 10 -u $local_user $local_addres $remote_dayfile \"$job_catalog\" $local_dayfile" >> $job_to_send
[1090]	1268	echo "[[ \"\$for_subjob_to_do\" != \"\" ]] && eval \$for_subjob_to_do" >> $job_to_send
	1269	echo "%%END%%" >> $job_to_send
	1270
[181]	1271	elif [[ $(echo $remote_host \| cut -c1-5) = lcsgi ]]
	1272	then
	1273	echo "cat > scpjob.$kennung << %%END%%" >> $job_to_send
	1274	echo "#!/bin/bash" >> $job_to_send
	1275	echo "#PBS -N job_protocol_transfer" >> $job_to_send
[325]	1276	echo "#PBS -l walltime=00:30:00" >> $job_to_send
[181]	1277	echo "#PBS -l nodes=1:ppn=1" >> $job_to_send
[366]	1278	echo "#PBS -l feature=data" >> $job_to_send
[181]	1279	echo "#PBS -o \$HOME/job_queue/last_job_transfer_protocol" >> $job_to_send
	1280	echo "#PBS -j oe" >> $job_to_send
	1281	echo " " >> $job_to_send
	1282	echo ". /usr/share/modules/init/bash" >> $job_to_send
	1283	echo "set -x" >> $job_to_send
[1094]	1284	echo "batch_scp $PORTOPT -d -w 10 -u $local_user $local_addres ${job_catalog}/$remote_dayfile \"$job_catalog\" $local_dayfile" >> $job_to_send
[181]	1285	echo "[[ \"\$for_subjob_to_do\" != \"\" ]] && eval \$for_subjob_to_do" >> $job_to_send
	1286	echo "%%END%%" >> $job_to_send
	1287
[1]	1288	else
	1289
	1290	echo "cat > scpjob.$kennung << %%END%%" >> $job_to_send
	1291	echo "# @\\\$-q $return_queue" >> $job_to_send
	1292	echo "# @\\\$-l${qsubtime} 10" >> $job_to_send
	1293	echo "# @\\\$-l${qsubmem} 10mb" >> $job_to_send
	1294	if [[ $remote_host = t3ej2 \|\| $remote_host = t3ej5 \|\| $remote_host = t3es ]]
	1295	then
	1296	echo "# @\$-l mpp_p=0" >> $job_to_send
	1297	fi
	1298	echo '# @\$-lF 10mb' >> $job_to_send
	1299	# echo '# @\$-o /dev/null' >> $job_to_send
	1300	echo '# @\$-o job_queue/last_job_transfer_protocol' >> $job_to_send
	1301	echo '# @\\\$-eo' >> $job_to_send
	1302	echo " " >> $job_to_send
	1303	if [[ $remote_host = t3ej2 \|\| $remote_host = t3ej5 ]]
	1304	then
	1305	echo "set +vx" >> $job_to_send
	1306	echo ". .profile" >> $job_to_send
	1307	fi
	1308	echo "set -x" >> $job_to_send
[1094]	1309	echo "batch_scp $PORTOPT -d -w 10 -u $local_user $local_addres ${job_catalog}/$remote_dayfile \"$job_catalog\" $local_dayfile > /dev/null" >> $job_to_send
[1]	1310	echo "[[ \"\$for_subjob_to_do\" != \"\" ]] && eval \$for_subjob_to_do" >> $job_to_send
	1311	echo "%%END%%" >> $job_to_send
	1312	fi
	1313
	1314	if [[ $(echo $remote_host \| cut -c1-3) = ibm ]]
	1315	then
	1316	echo "llsubmit scpjob.$kennung" >> $job_to_send
[181]	1317	elif [[ $(echo $remote_host \| cut -c1-5) = lcsgi ]]
	1318	then
[748]	1319	echo "rm -rf \$HOME/job_queue/last_job_transfer_protocol" >> $job_to_send
	1320	echo "chmod u+x scpjob.$kennung" >> $job_to_send
	1321	echo "msub scpjob.$kennung" >> $job_to_send
[1]	1322	elif [[ $remote_host = t3eb \|\| $remote_host = t3eh \|\| $remote_host = t3ej2 \|\| $remote_host = t3ej5 ]]
	1323	then
	1324	echo "qsub -J n scpjob.$kennung" >> $job_to_send
	1325	elif [[ $remote_host = t3es ]]
	1326	then
	1327	echo "qsub -J n -s /bin/ksh scpjob.$kennung" >> $job_to_send
[1043]	1328	elif [[ $remote_host = lckiaps ]]
	1329	then
	1330	echo "mv scpjob.$kennung $job_catalog" >> $job_to_send
[1094]	1331	echo "ssh $SSH_PORTOPT ${remote_username}@${remote_addres} \"$submcom ${job_catalog}/scpjob.$kennung\" " >> $job_to_send
[1043]	1332	echo "rm ${job_catalog}/scpjob.$kennung" >> $job_to_send
[1090]	1333	elif [[ $remote_host = lckyut ]]
	1334	then
[1094]	1335	echo "scp $PORTOPT scpjob.$kennung ${remote_username}@${remote_addres}:job_queue" >> $job_to_send
	1336	echo "ssh $SSH_PORTOPT ${remote_username}@${remote_addres} \"cd job_queue; $submcom scpjob.$kennung; rm scpjob.$kennung\" " >> $job_to_send
[1]	1337	else
[1040]	1338	echo "$submcom scpjob.$kennung" >> $job_to_send
[1]	1339	fi
[1043]	1340	if [[ $remote_host != ibmku && $remote_host != lckiaps ]]
[622]	1341	then
	1342	echo "rm scpjob.$kennung" >> $job_to_send
	1343	fi
[1]	1344	if [[ $remote_host = nech ]]
	1345	then
	1346	echo "cd -" >> $job_to_send
	1347	fi
	1348	else
	1349	# echo "ftpcopy -d $local_addres ${job_catalog}/$remote_dayfile \"$job_catalog\" $local_dayfile" >> $job_to_send
	1350	echo "nohup ftpcopy -d -w 15 $local_addres ${job_catalog}/$remote_dayfile \"$job_catalog\" $local_dayfile > /dev/null &" >> $job_to_send
	1351	fi
	1352	echo "set -x" >> $job_to_send
	1353	echo " ' exit" >> $job_to_send
	1354	echo "set -x" >> $job_to_send
	1355	fi
	1356
	1357
	1358
	1359	# EIGENTLICHE JOB-DATEI AN QSUB-KOMMANDOS ANHAENGEN
	1360	cat $file_to_send >> $job_to_send
[69]	1361
[1]	1362	if [[ $remote_host = ibm ]]
	1363	then
	1364	echo " " >> $job_to_send
	1365	echo "exit" >> $job_to_send
	1366	fi
[635]	1367
	1368	# remove job file
[622]	1369	if [[ $remote_host = lctit \|\| $remote_host = ibmku ]]
[69]	1370	then
	1371	echo " " >> $job_to_send
	1372	echo "rm ~/job_queue/$job_on_remhost" >> $job_to_send
	1373	fi
[1]	1374
	1375
	1376
	1377	# USER-NAME AUF ZIELRECHNER AUS .NETRC-DATEI ERMITTELN
	1378	if [[ -z $remote_user ]]
	1379	then
	1380	if [[ $remote_host = t3eb \|\| $remote_host = t3eh \|\| $remote_host = t3ej2 \|\| $remote_host = t3ej5 \|\| $remote_host = t3es \|\| $remote_host = vpp ]]
	1381	then
	1382	grep $remote_addres ~/.netrc \| read dum dum dum remote_user dum dum
	1383	fi
	1384	fi
	1385
	1386
	1387
	1388	# JOB AUF ZIELRECHNER TRANSFERIEREN BZW. INS JOBVERZEICHNIS KOPIEREN
	1389	if [[ $no_submit = false ]]
	1390	then
	1391	if [[ $remote_host != $local_host ]]
	1392	then
	1393	[[ $verify = true ]] && printf "\n >>> transfering job to \"$remote_host\"..."
[82]	1394	if [[ $remote_host = ibms \|\| $remote_host = ibmy ]] # ssh on ibms cannot handle "~/"
[1]	1395	then
[82]	1396	job_catalog_save=$job_catalog
	1397	job_catalog=job_queue
	1398	elif [[ $remote_host = nech ]]
	1399	then
	1400	job_catalog_save=$job_catalog
	1401	job_catalog=/hpf/b/${remote_user}/job_queue
	1402	fi
	1403	if [[ $local_host = decalpha ]]
	1404	then
	1405	# VERWENDUNG VON SCP AUF DECALPHA FRAGT FEHLERHAFTERWEISE
	1406	# PASSWORT AB
[1094]	1407	/bin/scp $PORTOPT $job_to_send ${remote_user}@${remote_addres}:${job_catalog}/$job_on_remhost
[82]	1408	elif [[ $remote_host = nech ]]
	1409	then
	1410	# DATEIEN KOENNEN NUR UEBER DEN ARCHIVE-SERVER DES DKRZ
	1411	# TRANSFERIERT WERDEN
[1094]	1412	scp $PORTOPT $job_to_send ${remote_user}@136.172.44.205:${job_catalog}/$job_on_remhost
[1]	1413	else
[1094]	1414	scp $PORTOPT $job_to_send ${remote_user}@${remote_addres}:${job_catalog}/$job_on_remhost
[1]	1415	fi
[82]	1416	if [[ $? = 1 ]]
	1417	then
	1418	locat=scp; exit
	1419	fi
	1420	if [[ $remote_host = ibms ]]
	1421	then
	1422	job_catalog=$job_catalog_save
	1423	fi
[1]	1424	[[ $verify = true ]] && printf "\n >>> finished\n"
	1425	else
	1426	eval job_catalog=$job_catalog
	1427	cp $job_to_send ${job_catalog}/$job_on_remhost
	1428	fi
	1429
	1430
	1431
	1432	# NQS- BZW. LOADLEVELER-JOB STARTEN
	1433	if [[ $remote_host != $local_host ]]
	1434	then
	1435	[[ $verify = true ]] && printf "\n >>> submitting job using \"qsub\"...\n"
[635]	1436
	1437	if [[ $(echo $remote_host \| cut -c1-5) = lcsgi && $prio = true ]]
[1]	1438	then
[635]	1439	printf "\n >>> submit with HLRN qos-feature hiprio...\n"
[1094]	1440	ssh $SSH_PORTOPT $remote_addres -l $remote_user "cd $job_catalog; $submcom -l qos=hiprio $job_on_remhost; rm $job_on_remhost"
[635]	1441	elif [[ $remote_host = ibmku ]]
	1442	then
[1094]	1443	ssh $SSH_PORTOPT $remote_addres -l $remote_user "cd $job_catalog; $submcom $job_on_remhost"
[1]	1444	else
[1094]	1445	ssh $SSH_PORTOPT $remote_addres -l $remote_user "cd $job_catalog; $submcom $job_on_remhost; rm $job_on_remhost"
[82]	1446	fi
[1]	1447
	1448	[[ $verify = true ]] && printf " >>> o.k.\n"
	1449	else
	1450	cd $job_catalog
[210]	1451	if [[ $(echo $local_host \| cut -c1-5) = lcsgi \|\| $(echo $local_host \| cut -c1-3) = ibm ]]
[1]	1452	then
	1453	eval $submcom $job_on_remhost
[1090]	1454	elif [[ $local_host = lcfimm \|\| $local_host = lctit \|\| $localhost = lcxe6 \|\| $localhost = lck \|\| $localhost = lckordi \|\| $localhost = lcyon \|\| $localhost = lcsb \|\| $localhost = lckyut ]]
[108]	1455	then
[635]	1456	chmod u+x $job_on_remhost
	1457	echo "$submcom $job_on_remhost"
[108]	1458	eval $submcom $job_on_remhost
[1]	1459	elif [[ $local_host = nech ]]
	1460	then
	1461	if [[ $queue = default ]]
	1462	then
[799]	1463	eval $submcom $job_on_remhost
[1]	1464	else
[799]	1465	eval $submcom -q $queue $job_on_remhost
[1]	1466	fi
	1467	else
	1468	qsub $job_on_remhost
	1469	fi
[622]	1470
	1471	# Jobfile must not be deleted on lctit/ibmku!! This will be done
	1472	# only at the end of the job.
	1473	if [[ $local_host != lctit && $local_host != ibmku ]]
	1474	then
	1475	rm $job_on_remhost
	1476	fi
[1]	1477	cd - > /dev/null
	1478	fi
	1479	fi
	1480
	1481
	1482
	1483	# ABSCHLUSSARBEITEN
	1484
	1485	if [[ $no_submit = false ]]
	1486	then
	1487	rm $job_to_send
	1488	fi
	1489	[[ $verify = true ]] && printf "\n\n *** SUBJOB finished \n\n"

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