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source: palm/trunk/SCRIPTS/mrun_new @ 11

Last change on this file since 11 was 5, checked in by raasch, 18 years ago
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1	#!/bin/ksh
2
3	##!/home/DSRC/NC/tatuyama/pub/ksh NEEDED ON NEC AT RIAM !!!!!!!!!!
4
5	# mrun - Plot-Shellskript Version: @(#)MRUN 1.8 10/02/07
6
7	# Prozedur zum Starten von Modellaeufen
8
9	# letzte Aenderung:
10	# 03/03/94 - Siggi - Entwicklungsbeginn
11	# 21/03/94 - Siggi - Entwicklungsabschluss (Version 1.0)
12	# 09/12/94 - Siggi - allexport unterbunden; statt dessen werden jetzt ein-
13	# zelne Variable exportiert. Dies ist noetig, weil an-
14	# sonsten irgendein Speicher ueberlaeuft und von mrun
15	# aufgerufene Programme (z.B. stageout) mit Fehlern
16	# abbrechen (too many arguments)
17	# 20/06/95 - Siggi - noclobber muss explizit abgeschaltet, da jetzt
18	# defaultmaessig im RRZN-Profile eingeschaltet
19	# 10/06/97 - Siggi - Zusaetzliche Option -C bei cpp, damit // nicht
20	# wegfallen
21	# 25/04/00 - Siggi - Version 1.5
22	# remote_addres und remote_user in return_addres bzw.
23	# return_username umbenannt, return_username wird dem
24	# mrun-Aufruf im Job ueber Option -U mitgegeben.
25	# Neue Variable remote_username, die beim interaktiven
26	# mrun-Aufruf zwingend ueber die neue Option -u oder
27	# in der Konfigurationsdatei angegeben werden muss.
28	# 08/02/01 - Siggi - Alle mrun-Meldungen ins englische uebersetzt,
29	# Version 1.7
30	# 05/05/02 - Siggi - Uebersetzungen mittels make-Mechanismus moeglich
31	# 21/11/02 - Siggi - ENV-Variable XLFRTEOPTS wird vor Ausfuehrung auf
32	# IBM gesetzt, um Record-Laenge der NAMELIST-Dateien,
33	# zu bestimmen; Praeprozessoroptionen haben nun alle
34	# die Form -Dtext=text, weil auf IBM sonst text durch
35	# die leere Zeichenkette ersetzt wird
36	# 01/08/03 - Siggi - Test of implementing dvrp+1PE on ibm
37	# 07/01/04 - Siggi - additional preprocessor directive for ibm included
38	# (-D$OMP=OMP) in order to avoid problems with
39	# OMP_NUM_THREADS
40	# 04/01/05 - Siggi - archiving on hanni and berni is done in separate
41	# tar files, one for each node used
42	# 07/01/04 - Siggi - old code for t3e, vpp and hpcs eliminated
43	# 09/01/05 - Siggi - workaround for getting the IP address on gfdl3
44	# 17/01/05 - Siggi - job for data transfer to local machine now within
45	# job class c1 (HLRN)
46	# 27/01/05 - Siggi - IP address workaround for gfdl3 removed
47	# 28/01/05 - Siggi - tar-filenames on $PERM (HLRN) now include the
48	# base filename and cycle number
49	# 16/02/05 - Gerald - hababai validated
50	# 14/03/05 - Siggi - abort on NEC after first runtime error (F_ERRCNT)
51	# 29/03/05 - Marcus - berni*-en0 validated
52	# 21/04/05 - Siggi - transfer-job-protocol for avs-data is no more stored
53	# 24/04/05 - Siggi - netcdf support on lcmuk
54	# 25/04/05 - Siggi - netcdf support on gfld3 (decalpha)
55	# 11/05/05 - Siggi - files with non-numeric extensions (.xxx after cycle
56	# number) can now be used within interactive runs
57	# 12/05/05 - Siggi - netcdf support on ibm
58	# 13/05/05 - Siggi - error in tar-filenames on $PERM (HLRN) removed
59	# 18/05/05 - Siggi - netcdf support on nec
60	# 24/05/05 - Siggi - netcdf support on ibms
61	# 14/06/05 - Siggi - sleep interval after submit of restart job increased
62	# to 30 seconds
63	# 28/06/05 - Siggi - bora adjusted to new intel compiler (LD_LIBRARY_
64	# PATH is temporarily set)
65	# 07/09/05 - Siggi - setting of MP_EAGER_LIMIT switched off because it
66	# caused warnings in the job protocol
67	# 20/10/05 - Siggi - update of netcdf-version on decalpha (gfdl3)
68	# 25/10/05 - Siggi - error in listing files for getting the cycle number
69	# removed
70	# 26/10/05 - Siggi - new paths for dvrp-library, transfer of catalogs
71	# realized by file attribute trpe
72	# 28/10/05 - Siggi - if existing, the file extension is output in case
73	# of missing input file - no job abort in case of
74	# missing input files with file extensions
75	# (preliminary solution)
76	# 31/10/05 - Siggi - data transfer from nech now within seperate job
77	# 04/11/05 - Siggi - netcdf 3.6.0-p1 on ibmh/ibmb
78	# 07/12/05 - Siggi - gallego and elephanta admitted
79	# 30/12/05 - Siggi - gfdl5 (ibmy) admitted
80	# 10/01/06 - Siggi - cpp directive for NetCDF 64bit support
81	# 20/01/06 - Siggi - cpp directive for ibmy
82	# 09/02/06 - Siggi - ibmy admitted for batch mode
83	# 13/04/06 - Siggi - ostria admitted
84	# 18/04/06 - Siggi - usage of OpenMP implemented (additional option -O)
85	# 10/05/06 - Siggi - environment variable XLSMPOPTS set on IBM for
86	# optimization of OpenMP runs (option stacksize is
87	# necessary for large gridpoint numbers because
88	# otherwise a segmentation fault occurs)
89	# 23/05/05 - Siggi - lctit (SUN Fire X4600) admitted
90	# 21/08/06 - Siggi - standard mrun path on scirocco is as on bora
91	# 23/08/06 - Siggi - netcdf support for scirocco (notebook)
92	# 20/09/06 - Marcus - add DVRP library on nech
93	# 24/10/06 - Siggi - Environment variables for PALM steering are written
94	# on local NAMELIST file ENVPAR
95	# 24/11/06 - Siggi - levanto admitted, maestro switched to ifc 9.1
96	# 28/11/06 - Siggi - call to interpret_config.x_levanto because of SuSe 10
97	# 06/02/07 - Siggi - add DVRP library on lcmuk
98	# 07/02/07 - Siggi - revision of source code handling, source code is
99	# now expected in directory given by source_path and
100	# not in the current working directory, source code
101	# files provided in add_source_path are allways
102	# compiled, source code to be compiled is allways
103	# sampled in SOURCES_FOR_RUN_$fname which is a
104	# subdirectory of the current working directory,
105	# -s TEST changed to -s WRITE_PERMIT or -s WP,
106	# adapted for RIAM (neck)
107	# bugfix for cycle number of output file (extout)
108	# all hpmuk-related code removed
109
110
111
112
113	# VARIABLENVEREINBARUNGEN + DEFAULTWERTE
114
115	set +o allexport # SICHERHEITSHALBER UNTERBINDEN, DA SONST EVTL. STAGEOUT
116	# NICHT LAUEFT (TOO MANY ARGUMENTS - PROBLEM)
117	set +o noclobber # EXISTIERENDE DATEIEN DUERFEN UEBERSCHRIEBEN WERDEN
118
119	AddFilenames=""
120	additional_conditions=""
121	add_source_path=""
122	afname=""
123	archive_save=true
124	archive_system=none
125	compiler_name=""
126	cond1=""
127	cond2=""
128	config_file=.mrun.config
129	cpp_opts=""
130	cpumax=0
131	cpurest=0
132	delete_temporary_catalog=true
133	do_batch=false
134	do_compile=true
135	do_remote=false
136	do_stagein=true
137	do_stageout=true
138	do_trace=false
139	email_notification=""
140	exclude=""
141	executable=""
142	execution_error=false
143	filetransfer_protocol=""
144	fname=test
145	fromhost=""
146	host=""
147	host_file=""
148	hp=""
149	ignore_archive_error=false
150	input_list=""
151	interpreted_config_file=""
152	job_on_file=""
153	keep_data_from_previous_run=false
154	localhost_realname=$(hostname)
155	local_compile=false
156	locat=normal
157	mainprog=""
158	makefile=""
159	mc=$0
160	while [[ $(echo $mc \| grep -c "/") != 0 ]]
161	do
162	mc=`echo $mc \| cut -f2- -d"/"`
163	done
164	module_files=""
165	MODULE_OPTIONS=""
166	mrun_script_name=$mc
167	netcdf_support=false
168	node_usage=default
169	numprocs=""
170	OOPT=""
171	openmp=false
172	output_list=""
173	package_list=""
174	punkte="..........................................................."
175	queue=none
176	read_from_config=""
177	restart_run=false
178	return_addres=$(nslookup `hostname` 2>&1 \| grep "Address:" \| tail -1 \| awk '{print $2}')
179	if [[ $return_addres = 130.75.105.158 ]]
180	then
181	return_addres=172.20.25.41
182	echo "+++ WARNING: return_addres changed to $return_addres !!!!!"
183	fi
184	# if [[ $return_addres = 210.117.65.1 ]]
185	# if [[ $(nslookup `hostname` 2>&1 \| grep -c 210.117.65.1) = 1 ]]
186	# then
187	# [[ $localhost_realname = gfdl3.yonsei.ac.kr ]] && return_addres=165.132.26.56
188	# fi
189	return_password=""
190	return_username=$LOGNAME
191	remotecall=false
192	remote_username=""
193	run_mode=""
194	scirocco=false
195	store_on_archive_system=true
196	striche=" ----------------------------------------------------------------------------"
197	silent=false
198	source_list=""
199	source_path=SOURCE
200	tasks_per_node=""
201	threads_per_task=1
202	tmpcreate=false
203	tmp_data_catalog=""
204	transfer_problems=false
205	usern=$LOGNAME
206	use_makefile=""
207	working_directory=`pwd`
208	TOPT=""
209	XOPT=""
210	zeit=$( date \| cut -c 12-19 )
211
212	typeset -i iec=0 iic=0 iin=0 ioc=0 iout=0 memory=0 stagein_anz=0 stageout_anz=0
213	typeset -i cputime i ii icycle inode ival jobges jobsek maxcycle minuten nodes pes sekunden tp1
214
215	typeset -R40 calltime
216	typeset -L20 spalte1
217	typeset -L40 spalte2
218	typeset -L60 spalte3
219	typeset -L35 string1=`date`
220	typeset -L12 string2=$usern
221	typeset -L12 string3=$localhost_realname
222	typeset -L12 string4
223	typeset -L12 string5
224	typeset -L20 version="MRUN 1.8"
225
226
227
228	# EINZELNE VARIABLE FUER HAUPTPROGRAMM EXPORTIEREN
229	export cpurest fname host localhost return_addres return_username remotecall tasks_per_node
230
231	# FOLGENDE VARIABLEN MUESSEN FUER DIE INTERPRETATION DER KONFIGURATIONSDATEI
232	# EXPORTIERT WERDEN
233	export afname config_file cpp_opts cpumax do_batch do_trace fname fromhost
234	export input_list memory numprocs output_list queue run_mode
235
236
237
238	# FEHLERBEHANDLUNG
239	# BEI EXIT:
240	trap 'if [[ $locat != localhost ]]
241	then
242	if [[ ! -f ${mrun_path}/statistik/mrun_statistik ]]
243	then
244	cat > ${mrun_path}/statistik/mrun_statistik << %STATEND%
245	MRUN-calls on $localhost
246
247	date and time user localhost remotehost termination mrun-command
248	--------------------------------------------------------------------------------------------------------------------
249	%STATEND%
250	chmod 666 ${mrun_path}/statistik/mrun_statistik
251	fi
252
253	# EINTRAG IN DIE STATISTIK-DATEI
254	string4=$host
255	string5=$locat
256	if [[ "$job_on_file" = "" && $locat != control_c && $locat != user_abort ]]
257	then
258	if [[ $do_batch = true ]]
259	then
260	printf "$string1$string2$string3$string4$string5$mrun_com \n" >> ${mrun_path}/statistik/mrun_statistik
261	else
262	printf "$string1$string2$string3$string4$string5$mc \n" >> ${mrun_path}/statistik/mrun_statistik
263	fi
264	fi
265	fi
266
267	if [[ $locat != normal && $locat != control_c && $locat != local_compile ]]
268	then
269
270	# EVENTUELLE ERROR-KOMMANDOS ABARBEITEN
271	(( i = 0 ))
272	while (( i < iec ))
273	do
274	(( i = i + 1 ))
275	printf "\n *** Execution of ERROR-command:\n"
276	printf " >>> ${err_command[$i]}\n"
277	eval ${err_command[$i]}
278	done
279	if [[ -n $interpreted_config_file ]] then
280	rm -rf $interpreted_config_file
281	fi
282	if [[ $tmpcreate = true ]]
283	then
284	printf "\n *** Contents of \"$TEMPDIR\":\n"
285	ls -al; cd
286	[[ $delete_temporary_catalog = true ]] && rm -rf $TEMPDIR
287	fi
288	if [[ -f ~/job_queue/JOBINFO.$QSUB_REQID ]]
289	then
290	rm -rf ~/job_queue/JOBINFO.$QSUB_REQID
291	fi
292	printf "\n\n+++ MRUN killed \n\n"
293	elif [[ $locat != control_c ]]
294	then
295	printf "\n\n --> all actions finished\n\n"
296	printf " Bye, bye $usern !!\n\n"
297	fi' exit
298
299
300	# BEI TERMINAL-BREAK:
301	trap '[[ $tmpcreate = true ]] && (cd; rm -rf $TEMPDIR)
302	if [[ -f ~/job_queue/JOBINFO.$QSUB_REQID ]]
303	then
304	rm -rf ~/job_queue/JOBINFO.$QSUB_REQID
305	fi
306	printf "\n+++ MRUN killed by \"^C\" \n\n"
307	locat=control_c
308	exit
309	' 2
310
311
312	# EVTL. NAMEN DES LOKALEN RECHNERS MIT UEBERGREIFENDEM NAMEN VERSEHEN
313	case $localhost_realname in
314	(atmos) mrun_path=/home/siggi/pub
315	localhost=lcide;;
316	(bora\|breva\|elephanta\|gallego\|gregale\|hababai\|irifi\|levanto\|maestro\|orkan\|ostria\|poniente\|quanero\|scirocco\|vorias) mrun_path=/home/raasch/pub
317	localhost=lcmuk;;
318	(breg-en0\|berni-en0) mrun_path=/home/b/niksiraa/pub
319	localhost=ibmb; archive_system=tivoli;;
320	(cs*) mrun_path=/pf/b/b323011/pub
321	localhost=nech; archive_system=ut;;
322	(gate\|n-sx) mrun_path=/home/DSRC/NC/tatuyama/pub
323	PATH=$PATH:/usr/bin/nqsII:$mrun_path
324	localhost=neck;;
325	(ground.yonsei.ac.kr) mrun_path=/usr/users/raasch/pub
326	localhost=decalpha;;
327	(gfdl3.yonsei.ac.kr) mrun_path=/usr2/users/raasch/pub
328	localhost=decalpha;;
329	(gfdl5) mrun_path=/usr1/users/raasch/pub
330	localhost=ibmy;;
331	(gwdk081.gwdg.de\|gwdk082.gwdg.de\|gwdk083.gwdg.de) mrun_path=/usr/users/sraasch/pub
332	localhost=ibm;;
333	(hreg-en0\|hanni-en0) mrun_path=/home/h/niksiraa/pub
334	localhost=ibmh; archive_system=tivoli;;
335	(nobel*) mrun_path=/edun/z051nyg/pub
336	localhost=ibms;;
337	(sun1\|sun2) mrun_path=/home/nhbksira/pub/
338	localhost=unics;;
339	(tgg*) mrun_path=/home2/usr5/mkanda/pub
340	localhost=lctit;;
341	(*) printf "\n +++ Host \"$localhost_realname\" not admitted for mrun \n"
342	locat=localhost; exit;;
343	esac
344
345	[[ $localhost_realname = scirocco ]] && scirocco=true
346
347
348
349	# SHELLSCRIPT-OPTIONEN EINLESEN UND KOMMANDO NEU ZUSAMMENSETZEN, FALLS ES
350	# FUER FOLGEJOBS BENOETIGT WIRD
351	while getopts :a:AbBc:Cd:D:f:Fh:H:i:IkK:m:M:n:o:Op:P:q:r:R:s:St:T:u:U:vxX: option
352	do
353	case $option in
354	(a) afname=$OPTARG;;
355	(A) store_on_archive_system=false; mc="$mc -A";;
356	(b) do_batch=true; mc="$mc -b";;
357	(B) delete_temporary_catalog=false; mc="$mc -B";;
358	(c) config_file=$OPTARG; mc="$mc -c$OPTARG";;
359	(C) restart_run=true; mc="$mc -C";;
360	(d) fname=$OPTARG; mc="$mc -d$OPTARG";;
361	(D) cpp_opts="$cpp_opts $OPTARG"; mc="$mc -D$OPTARG";;
362	(f) filetransfer_protocol=$OPTARG; mc="$mc -f$OPTARG";;
363	(F) job_on_file="-D"; mc="$mc -F";;
364	(h) host=$OPTARG; mc="$mc -h$OPTARG";;
365	(H) fromhost=$OPTARG; mc="$mc -H$OPTARG";;
366	(i) input_list=$OPTARG; mc="$mc -i'$OPTARG'";;
367	(I) ignore_archive_error=true; mc="$mc -I";;
368	(k) keep_data_from_previous_run=true; mc="$mc -k";;
369	(K) additional_conditions="$OPTARG"; mc="$mc -K$OPTARG";;
370	(m) memory=$OPTARG; mc="$mc -m$OPTARG";;
371	(M) makefile=$OPTARG; mc="$mc -M$OPTARG";;
372	(n) node_usage=$OPTARG; mc="$mc -n$OPTARG";;
373	(o) output_list=$OPTARG; mc="$mc -o'$OPTARG'";;
374	(O) use_openmp=true; mc="$mc -O";;
375	(p) package_list=$OPTARG; mc="$mc -p'$OPTARG'";;
376	(P) return_password=$OPTARG; mc="$mc -P$OPTARG";;
377	(q) queue=$OPTARG; mc="$mc -q$OPTARG";;
378	(r) run_mode=$OPTARG; mc="$mc -r'$OPTARG'";;
379	(R) remotecall=true;return_addres=$OPTARG; mc="$mc -R$OPTARG";;
380	(s) source_list=$OPTARG; mc="$mc -s'$OPTARG'";;
381	(S) read_from_config=false; mc="$mc -S";;
382	(t) cpumax=$OPTARG; mc="$mc -t$OPTARG";;
383	(T) tasks_per_node=$OPTARG; mc="$mc -T$OPTARG";;
384	(u) remote_username=$OPTARG; mc="$mc -u$OPTARG";;
385	(U) return_username=$OPTARG; mc="$mc -U$OPTARG";;
386	(v) silent=true; mc="$mc -v";;
387	(x) do_trace=true;set -x; mc="$mc -x";;
388	(X) numprocs=$OPTARG; mc="$mc -X$OPTARG";;
389	(\?) printf "\n +++ unknown option $OPTARG \n"
390	printf "\n --> type \"$0 ?\" for available options \n"
391	locat=parameter;exit;;
392	esac
393	done
394
395
396	# EVTL. POSITIONSPARAMETER EINLESEN
397	# ZUR ZEIT GIBT ES NUR DEN PARAMETER ? (=KURZINFO)
398	shift OPTIND-1
399
400
401	# KURZE AUFRUFBESCHREIBUNG WIRD HIER AUSGEGEBEN
402	if [[ "$1" = "?" ]]
403	then
404	(printf "\n *** mrun can be called as follows:\n"
405	printf "\n $mrun_script_name -b -c.. -d.. -D.. -f.. -F -h.. -i.. -I -K.. -m.. -o.. -p.. -r.. -R -s.. -t.. -T.. -v -x -X.. <modus>\n"
406	printf "\n Description of available options:\n"
407	printf "\n Option Description Default-Value"
408	printf "\n -a base name of input files equiv. -d"
409	printf "\n -A no archiving when using file-attribute fl"
410	printf "\n -b batch-job on local machine ---"
411	printf "\n -B do not delete temporary directory at end ---"
412	printf "\n -c configuration file .mrun.config"
413	printf "\n -d base name of files attached to program test"
414	printf "\n -D preprocessor(cpp)-directives \"\" "
415	printf "\n -f filetransfer protocol (ftp or scp) depending on -h"
416	printf "\n -F create remote job file only ---"
417	printf "\n -h execution host $localhost_realname"
418	printf "\n -i INPUT control list \"\" "
419	printf "\n -I archiving errors of previous batch-jobs"
420	printf "\n will be ignored"
421	printf "\n -k keep data from previous run"
422	printf "\n -K additional conditions for controling"
423	printf "\n usage of conditional code and"
424	printf "\n env-variables in configuration file \"\" "
425	printf "\n -m memory demand in MB (batch-jobs) 0 MB"
426	printf "\n -M Makefile name Makefile"
427	printf "\n -n node usage (shared/not_shared) depending on -h"
428	printf "\n -o OUTPUT control list \"\" "
429	printf "\n -O use OpenMP ---"
430	printf "\n -p software package list \"\" "
431	printf "\n -q queue \"$queue\" "
432	printf "\n -r run control list (combines -i -o) \"\" "
433	printf "\n -s filenames of routines to be compiled \"\" "
434	printf "\n must end with .f, .f90, .F, or .c !"
435	printf "\n use \"..\" for more than one file and wildcards"
436	printf "\n -s TEST compiles all files with w-permit"
437	printf "\n -S config file interpreted by shellscript ---"
438	printf "\n -t allowed cpu-time in seconds (batch) 0"
439	printf "\n -T tasks per node depending on -h"
440	printf "\n -u username on remote machine \"\" "
441	printf "\n -v no prompt for confirmation ---"
442	printf "\n -x tracing of mrun for debug purposes ---"
443	printf "\n -X # of processors (on parallel machines) 1"
444	printf "\n "
445	printf "\n Possible values of positional parameter <modus>:"
446	printf "\n \"?\" - this outline \n\n") \| more
447	exit
448	elif [[ "$1" != "" ]]
449	then
450	printf "\n +++ positional parameter $1 unknown \n"
451	locat=parameter; exit
452	fi
453
454
455
456	# KURZE STARTMELDUNG
457	printf "\n*** $version "
458	printf "\n will be executed. Please wait ..."
459
460
461	# BASISNAME DER INPUT-DATEIEN GLEICH ALLGEMEINEM BASISNAMEN SETZEN,
462	# WENN NICHT VOM BENUTZER ANDERS BESTIMMT
463	[[ "$afname" = "" ]] && afname=$fname
464
465
466	# EVTL. RUN-MODUS DEN I/O-LISTEN HINZUFUEGEN
467	if [[ "$run_mode" != "" ]]
468	then
469	input_list="$input_list $run_mode"
470	output_list="$output_list $run_mode"
471	fi
472
473
474	# RECHNERNAMEN ABSPEICHERN, VON DEM AUS JOB GESTARTET WIRD,
475	# ALLERDINGS NUR DANN, WENN NICHT PER OPTION -H BEREITS EIN WERT
476	# ZUGEWIESEN WURDE (MRUN MACHT DIES IMMER, WENN ES SELBST BATCH-JOBS
477	# STARTET)
478	if [[ "$fromhost" = "" ]]
479	then
480	fromhost=$localhost
481	fi
482
483
484	# PRUEFEN, OB MRUN NUR TESTWEISE AUF DER LOKALEN MASCHINE KOMPILIEREN SOLL
485	if [[ "$source_list" = LOCAL_COMPILE_TEST ]]
486	then
487	source_list=TEST
488	local_compile=true
489	host=$localhost
490	fi
491
492
493	# PRUEFEN, OB AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL
494	# WERT VON do_remote WIRD FUER DATEIVERBINDUNGEN BENOETIGT.
495	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
496	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
497	if [[ -n $host && "$host" != $localhost ]]
498	then
499	do_batch=true
500	do_remote=true
501	case $host in
502	(ibm\|ibmb\|ibmh\|ibms\|ibmy\|nech\|neck\|lctit\|unics) true;;
503	(*) printf "\n"
504	printf "\n +++ execution host \"$host\" not admitted for MRUN,"
505	printf "\n or NQS not available on execution host!"
506	locat=nqs; (( iec = 0 )); exit;;
507	esac
508	else
509	host=$localhost
510	fi
511
512
513	# ZUSATZBEDINGUNGEN (OPTION -K) AUSWERTEN
514	if [[ -n $additional_conditions ]]
515	then
516	echo $additional_conditions \| cut -d" " -f1-3 \| read cond1 cond2 dummy
517	# cond1=`echo $additional_conditions \| cut -d" " -f1`
518	# cond2=`echo $additional_conditions \| cut -d" " -s -f2`
519	# dummy=`echo $additional_conditions \| cut -d" " -s -f3`
520	if [[ -n $dummy ]]
521	then
522	printf "\n +++ more than 2 additional conditions given for Option \"-K\""
523	locat=options; exit
524	fi
525	fi
526
527
528	# PRUEFEN, OB EVTL. BEI VORHERGEHENDEM LAUF (KETTENJOB) EINE
529	# ARCHIVIERUNG FEHLGESCHLAGEN IST
530	if [[ -f ~/job_queue/ARCHIVE_ERROR_$fname ]]
531	then
532	if [[ $ignore_archive_error = false ]]
533	then
534	printf "\n +++ data archiving of previous run failed"
535	printf "\n see directory \~/job_queue on remote machine"
536	locat=archive; exit
537	else
538	printf "\n +++ warning: data archiving in a previous run failed"
539	printf "\n MRUN continues, trying to get backup copy"
540	fi
541	fi
542
543
544	# PRUEFEN, OB KONFIGURATIONS-DATEI VORHANDEN
545	if [[ ! -f $config_file ]]
546	then
547	printf "\n\n +++ configuration file: "
548	printf "\n $config_file"
549	printf "\n does not exist"
550	locat=connect; exit
551	fi
552
553
554
555	# LESEN UND INTERPRETIEREN DER KONFIGURATIONS-DATEI VOM SHELLSCRIPT AUS
556	# VORUEBERGEHEND ZWINGEND AUF LINUX-RECHNERN
557	if [[ "$read_from_config" = false ]]
558	then
559
560	[[ $silent = false ]] && printf "\n Reading the configuration file... "
561	while read zeile
562	do
563	[[ $silent = false ]] && printf "."
564
565
566	# ZUERST EVENTUELL VORKOMMENDE ENVIRONMENT-VARIABLEN DURCH IHRE WERTE
567	# ERSETZEN
568	eval zeile=\"$zeile\"
569
570
571	# INTERPRETATION DER ZEILE
572	if [[ "$(echo $zeile \| cut -c1)" = "#" ]]
573	then
574
575	# ZEILE IST KOMMENTARZEILE
576	true
577
578	elif [[ "$(echo $zeile \| cut -c1)" = "%" ]]
579	then
580
581	# ZEILE DEFINIERT ENVIRONMENT-VARIABLE
582	zeile=$(echo $zeile \| cut -c2-)
583	echo $zeile \| cut -d" " -f1-5 \| read var value for_host for_cond1 for_cond2
584	# var=`echo $zeile \| cut -d" " -f1`
585	# value=`echo $zeile \| cut -d" " -s -f2`
586	# for_host=`echo $zeile \| cut -d" " -s -f3`
587	# for_cond1=`echo $zeile \| cut -d" " -s -f4`
588	# for_cond2=`echo $zeile \| cut -d" " -s -f5`
589
590	if [[ "$for_host" = "" \|\| ( "$for_host" = $host && "$for_cond1" = "$cond1" && "$for_cond2" = "$cond2" ) \|\| $(echo "$input_list$output_list"\|grep -c "$for_host") != 0 ]]
591	then
592
593	# BEI COMPILER- CPP- ODER LINKEROPTIONEN EVTL ":" DURCH " "
594	# ERSETZEN. "::" WIRD DURCH ":" ERSETZT.
595	value=`echo $value \| sed 's/::/%DUM%/g' \| sed 's/:/ /g' \| sed 's/%DUM%/:/g'`
596
597
598	# ENVIRONMENT-VARIABLE WIRD WERT AUS KONFIGURATIONSDATEI
599	# ZUGEWIESEN, WENN SIE SELBST NOCH KEINEN WERT UEBER DIE
600	# ENTSPRECHENDE SCRIPT-OPTION ERHALTEN HAT. SOLCHE
601	# VARIABLEN HAETTEN DANN DEN WERT "" ODER IM INTEGER-FALL DEN
602	# WERT 0. ALLGEMEINE REGEL ALSO: SCRIPT-OPTION GEHT UEBER
603	# KONFIGURATIONSDATEI
604	if [[ "$(eval echo \$$var)" = "" \|\| "$(eval echo \$$var)" = "0" ]]
605	then
606	eval $var=\$value
607
608	# EVTL. BILDSCHIRMAUSGABEN DER ENVIRONMENT-VARIABLEN
609	if [[ $do_trace = true ]]
610	then
611	printf "\n*** ENVIRONMENT-VARIABLE $var = $value"
612	fi
613	fi
614
615	# WENN ENVIRONMENT-VARIABLE HOST VEREINBART, DANN SOFORT AUSWERTEN
616	# WERT VON do-remote WIRD BEI DATEIVERBINDUNGEN BENOETIGT
617	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
618	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
619	if [[ $var = host ]]
620	then
621	if [[ -n $host && "$host" != $localhost ]]
622	then
623	do_batch=true
624	do_remote=true
625	case $host in
626	(ibm\|ibms\|ibmy\|lctit\|nech\|neck\|unics) true;;
627	(*) printf "\n +++ no queueing system available on execution host \"$host\""
628	locat=nqs; exit;;
629	esac
630	else
631	host=$localhost
632	fi
633	fi
634
635	# VOM BENUTZER DEFINIERTE ENVIRONMENT VARIABLEN MUESSEN PRINZIPIELL
636	# EXPORTIERT WERDEN, DA SIE VIELLEICHT IN WEITER UNTEN AUFZURUFEN-
637	# DEN PROGRAMMEN BENOETIGT WERDEN
638	export $var
639	fi
640
641
642
643
644	elif [[ "$(echo $zeile \| cut -c1-3)" = "EC:" ]]
645	then
646
647	# ZEILE DEFINIERT ERROR-KOMMANDO
648	(( iec = iec + 1 ))
649	zeile=$(echo $zeile \| cut -c4-)
650	err_command[$iec]="$zeile"
651
652	elif [[ "$(echo $zeile \| cut -c1-3)" = "IC:" ]]
653	then
654
655	# ZEILE DEFINIERT INPUT-KOMMANDO
656	(( iic = iic + 1 ))
657	zeile=$(echo $zeile \| cut -c4-)
658	in_command[$iic]="$zeile"
659
660	elif [[ "$(echo $zeile \| cut -c1-3)" = "OC:" ]]
661	then
662
663	# ZEILE DEFINIERT OUTPUT-KOMMANDO
664	(( ioc = ioc + 1 ))
665	zeile=$(echo $zeile \| cut -c4-)
666	out_command[$ioc]="$zeile"
667
668	else
669
670	# ZEILE DEFINIERT DATEIVERBINDUNG. EINLESEN DER DATEIEIGENSCHAFTEN
671	# s2a: in/out - Feld
672	# s2b: loc - Feld (optional)
673	# s2c: tr/ar - Feld (optional)
674	echo $zeile \| cut -d" " -f1-2 \| read s1 s2
675	# s1=`echo $zeile \| cut -d" " -f1`
676	# s2=`echo $zeile \| cut -d" " -s -f2`
677	s2a=$(echo $s2 \| cut -d":" -f1)
678	if [[ $(echo $s2 \| grep -c ":") = 0 ]]
679	then
680	s2b=""
681	s2c=""
682	else
683	echo $s2 \| cut -d":" -f2-3 \| sed 's/:/ /g' \| read s2b s2c
684	# s2b=`echo $s2 \| cut -d":" -f2 \| sed 's/:/ /g'`
685	# s2c=`echo $s2 \| cut -d":" -s -f3 \| sed 's/:/ /g'`
686	fi
687	echo $zeile \| cut -d" " -f3-6 \| read s3 s4 s5 s6
688	# s3=`echo $zeile \| cut -d" " -f3`
689	# s4=`echo $zeile \| cut -d" " -s -f4`
690	# s5=`echo $zeile \| cut -d" " -s -f5`
691	# s6=`echo $zeile \| cut -d" " -s -f6`
692
693
694	# ABSPEICHERN DER DATEIVERBINDUNG, FALLS IN INPUT- ODER OUTPUT-LIST
695	# VERMERKT. VARIABLE S3 KANN AUCH LISTE ENTHALTEN (FELDTRENNER ":")
696	# DATEIVERBINDUNG WIRD DANN NICHT ABGESPEICHERT UND GEPRUEFT, WENN
697	# PROGRAMMLAUF AUF REMOTE-MASCHINE ERFOLGT UND DATEI NUR LOKAL VOR-
698	# HANDEN SEIN MUSS (D.H. s2b = loc)
699	IFSALT="$IFS"; IFS="$IFS:"
700	if [[ "$s2a" = in && ! ( $do_remote = true && ( "$s2b" = loc \|\| "$s2b" = locopt ) ) ]]
701	then
702	found=false
703	for actual in $input_list
704	do
705	for formal in $s3
706	do
707	[[ $actual = $formal \|\| "$formal" = "-" ]] && found=true
708	done
709	done
710	if [[ $found = true ]]
711	then
712	(( iin = iin + 1 ))
713	localin[$iin]=$s1; transin[$iin]=$s2b; actionin[$iin]=$s2c;
714	typein[$iin]=$s3; pathin[$iin]=$s4; endin[$iin]=$s5;
715	extin[$iin]=$s6
716	fi
717	elif [[ "$s2a" = out && ! ( $do_remote = true && "$s2b" = loc ) ]]
718	then
719	found=false
720	for actual in $output_list
721	do
722	for formal in $s3
723	do
724	[[ $actual = $formal \|\| "$formal" = "-" ]] && found=true
725	done
726	done
727	if [[ $found = true ]]
728	then
729	(( iout = iout + 1 ))
730	localout[$iout]=$s1; actionout[$iout]=$s2c; typeout[$iout]=$s3;
731	pathout[$iout]=$s4; endout[$iout]=$s5; extout[$iout]=$s6
732	fi
733	elif [[ "$s2a" != in && "$s2a" != out ]]
734	then
735	printf "\n +++ I/O-attribute in configuration file $config_file has the invalid"
736	printf "\n value \"$s2\". Only \"in\" and \"out\" are allowed!"
737	locat=connect; exit
738	fi
739	IFS="$IFSALT"
740	fi
741	done < $config_file
742
743	else
744
745
746	# INTERPRETATION DER KONFIGURATIONSDATEI MITTELS FORTRAN 90 - PROGRAMM
747	[[ $silent = false ]] && printf "..."
748	export cond1 cond2 config_file do_remote do_trace input_list localhost output_list
749	export interpreted_config_file=.icf.$RANDOM
750
751	case $localhost_realname in
752	(caurus\|twister) interpret_config.hp;;
753	(bora\|breva\|elephanta\|gallego\|gregale\|hababai\|maestro\|orkan\|ostria) export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/muksoft/packages/intel_ifc/8.1/lib/; interpret_config_9.x;;
754	(levanto\|vorias) export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/muksoft/packages/intel/ifort/9.1.037/lib/; interpret_config_9.x_levanto;;
755	(quanero) export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/opt/intel_fc_80/lib; interpret_config_9.x;;
756	(*) interpret_config.x;;
757	esac
758
759
760	# AUSFUEHRUNG DER GENERIERTEN SHELL-KOMMANDOS IN DIESER SHELL
761	chmod u+x $interpreted_config_file
762	export PATH=$PATH:.
763	. $interpreted_config_file
764	rm $interpreted_config_file
765
766	fi
767
768
769	# QUELLTEXTVERZEICHNIS AUF LOKALER MASCHINE AUS KONFIGURATIONSDATEI
770	# BESTIMMEN (WUERDE SONST EVTL. DAS VERZEICHNIS DES JEWEILS UNTER -h
771	# ANGEGEBENEN REMOTE-RECHNERS SEIN)
772	# BEI BATCH-JOBS SIND DIE ZU UEBERSETZENDEN PROGRAMMTEILE SCHON KOMPLETT
773	if [[ "$SOURCES_COMPLETE" = "" ]]
774	then
775
776	# ZUERST PRUEFEN, OB EIN GLOBALER QUELLTEXTPFAD FUER ALLE RECHNER
777	# VEREINBART WURDE
778	source_path=""
779	line=""
780	grep "%source_path" $config_file > tmp_mrun
781	while read line
782	do
783	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
784	then
785	if [[ "$(echo $line \| cut -d" " -f3)" = "" ]]
786	then
787	global_source_path=`echo $line \| cut -d" " -f2`
788	fi
789	fi
790	done < tmp_mrun
791
792	line=""
793	found=false
794	grep " $localhost" $config_file \| grep "%source_path" > tmp_mrun
795	while read line
796	do
797	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
798	then
799	if [[ $found = true ]]
800	then
801	printf "\n\n +++ more than one source path found in configuration file"
802	printf "\n for local host \"$localhost\" "
803	locat=source_path; exit
804	fi
805	source_path=`echo $line \| cut -d" " -f2`
806	found=true
807	fi
808	done < tmp_mrun
809	rm tmp_mrun
810
811	if [[ "$source_path" = "" ]]
812	then
813	if [[ "$global_source_path" != "" ]]
814	then
815	source_path=$global_source_path
816	else
817	printf "\n\n +++ no source path found in configuration file"
818	printf "\n for local host \"$localhost\" "
819	locat=source_path; exit
820	fi
821	fi
822	eval source_path=$source_path
823
824	if [[ ! -d $source_path ]]
825	then
826	printf "\n\n +++ source path \"$source_path\" on local host"
827	printf "\n \"$localhost\" does not exist"
828	locat=source_path; exit
829	fi
830
831	fi
832
833
834
835	# NOCHMAL PRUEFEN, OB AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL
836	# (HOST KANN IN KONFIGURATIONSDATEI ANDERS FESTGELEGT WORDEN SEIN)
837	# WERT VON do_remote WIRD FUER DATEIVERBINDUNGEN BENOETIGT.
838	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
839	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
840	if [[ -n $host && "$host" != $localhost ]]
841	then
842	do_batch=true
843	do_remote=true
844	case $host in
845	(ibm\|ibmb\|ibmh\|ibms\|ibmy\|lctit\|nech\|neck\|unics) true;;
846	(*) printf "\n"
847	printf "\n +++ execution host \"$host\" not admitted for MRUN,"
848	printf "\n or no queueing system available on execution host!"
849	locat=nqs; (( iec = 0 )); exit;;
850	esac
851	else
852	host=$localhost
853	fi
854
855
856	# PRUEFUNG EINIGER PROZESSORZAHLANGABEN BEI RECHNUNGEN AUF PARALLELRECHNERN
857	if [[ "$cond1" = parallel \|\| "$cond2" = parallel ]]
858	then
859
860	# PRUEFEN, OB DIE ANZAHL DER ZU VERWENDENDEN PES ANGEGEBEN WURDE
861	if [[ ! -n $numprocs ]]
862	then
863	printf "\n"
864	printf "\n +++ option \"-K parallel\" requires additional specification"
865	printf "\n of the number of processors to be used by"
866	printf "\n mrun-option \"-X\" or by environment-variable"
867	printf "\n \"numprocs\" in the configuration file"
868	locat=numprocs; (( iec = 0 )); exit
869	fi
870
871	# PRUEFEN, OB DIE PROZESSORANZAHL PRO KNOTEN ANGEGEBEN WURDE (GGF.
872	# DEFAULT-WERT SETZEN) UND OB SIE EIN GANZZAHLIGER TEILER DER
873	# GESAMTPROZESSORANZAHL IST
874	if [[ $host = nech \|\| $host = neck \|\| $host = ibmh \|\| $host = ibmb \|\| $host = ibms ]]
875	then
876	[[ "$tasks_per_node" = "" ]] && tasks_per_node=6
877	(( ival = $tasks_per_node ))
878	(( pes = numprocs ))
879	# if [[ $(echo $package_list \| grep -c dvrp_graphics+1PE) = 1 ]]
880	# then
881	# (( pes = pes - 1 ))
882	# fi
883	(( ii = pes / ival ))
884	if (( pes - ii * ival > 0 ))
885	then
886	printf "\n"
887	printf "\n +++ tasks per node (option \"-T\") must be an integral"
888	printf "\n divisor of the total number of processors (option \"-X\")"
889	printf "\n values of this mrun-call: \"-T $tasks_per_node\" \"-X $numprocs\""
890	locat=tasks_per_node; (( iec = 0 )); exit
891	fi
892	fi
893
894	# IBMY HAT NUR EINEN KNOTEN
895	if [[ $host = ibmy ]]
896	then
897	if [[ "$tasks_per_node" != "" && "$tasks_per_node" != "$numprocs" ]]
898	then
899	printf "\n"
900	printf "\n +++ on ibmy, tasks per node (option \"-T\") must be equal to the"
901	printf "\n total number of processors (option \"-X\")"
902	printf "\n values of this mrun-call: \"-T $tasks_per_node\" \"-X $numprocs\""
903	locat=tasks_per_node; (( iec = 0 )); exit
904	fi
905	fi
906
907	# FALLS OPENMP PARALLELISIERUNG VERWENDET WERDEN SOLL, ANZAHL VON THREADS
908	# SETZEN UND ZAHL DER TASKS PRO KNOTEN AUF 1 SETZEN
909	if [[ $use_openmp = true ]]
910	then
911	threads_per_task=$tasks_per_node
912	tasks_per_node=1
913	fi
914	OOPT="-O $threads_per_task"
915	TOPT="-T $tasks_per_node"
916
917	# GESAMTZAHL DER KNOTEN BESTIMMEN
918	if [[ "$tasks_per_node" != "" ]]
919	then
920	(( nodes = numprocs / ( tasks_per_node * threads_per_task ) ))
921	fi
922
923	# PRUEFEN, OB NODE USAGE EINEN ERLAUBTEN WERT HAT BZW. DEN DEFAULT
924	# SETZEN
925	if [[ $node_usage = default ]]
926	then
927	if [[ $host = ibms ]]
928	then
929	node_usage=shared
930	else
931	node_usage=not_shared
932	fi
933	fi
934	if [[ $node_usage != shared && $node_usage != not_shared ]]
935	then
936	printf "\n"
937	printf "\n +++ node usage (option \"-n\") is only allowed to be set"
938	printf "\n \"shared\" or \"not_shared\""
939	locat=tasks_per_node; (( iec = 0 )); exit
940	fi
941
942	fi
943
944	# PRUEFEN, OB HOSTFILE EXISTIERT
945	if [[ -n $hostfile ]]
946	then
947	if [[ ! -f $hostfile ]]
948	then
949	printf "\n"
950	printf "\n +++ hostfile \"$hostfile\" does not exist"
951	locat=hostfile; exit
952	fi
953	fi
954
955	# PRUEFEN, OB RHOSTS DATEI EXISTIERT. GEGEBENENFALLS ANLEGEN BZW. ERWEITERN
956	if [[ $host = ibmy && $do_remote = false ]]
957	then
958	if [[ ! -f $HOME/.rhosts ]]
959	then
960	echo "gfdl5.yonsei.ac.kr" > $HOME/.rhosts
961	printf "\n\n *** file:"
962	printf "\n $HOME/.rhosts"
963	printf "\n was created\n"
964	fi
965	if [[ $(grep -c gfdl5.yonsei.ac.kr $HOME/.rhosts) = 0 ]]
966	then
967	echo "gfdl5.yonsei.ac.kr" >> $HOME/.rhosts
968	printf "\n\n *** file:"
969	printf "\n $HOME/.rhosts"
970	printf "\n was extended by the name of the current host\n"
971	fi
972	fi
973
974	# DEFAULT-DATEITRANSFER-PROTOKOLL FESTLEGEN
975	if [[ "$filetransfer_protocol" = "" ]]
976	then
977	case $host in
978	(nech\|neck\|ibm\|ibmb\|ibmh\|ibms\|ibmy\|lctit) filetransfer_protocol=scp;;
979	(*) filetransfer_protocol=ftp;;
980	esac
981	fi
982
983	# PRUEFEN, OB ZULAESSIGES DATEITRANSFER-PROTOKOLL GEWAEHLT WURDE
984	if [[ "$filetransfer_protocol" != ftp && "$filetransfer_protocol" != scp ]]
985	then
986	printf "\n"
987	printf "\n +++ illegal value \"$filetransfer_protocol\" for Option -f"
988	printf "\n only \"ftp\" or \"scp\" are allowed"
989	locat=options; exit
990	fi
991
992
993	# FALLS NICHT VORGEGEBEN, DEFAULT-QUEUE AUF DER ZIELMASCHINE FESTLEGEN
994	if [[ $queue = none ]]
995	then
996	case $host in
997	(ibmb) if [[ $node_usage = shared ]]
998	then
999	queue=cshare
1000	else
1001	queue=csolo
1002	fi;;
1003	(ibmh) if [[ $node_usage = shared ]]
1004	then
1005	queue=cshare
1006	else
1007	queue=csolo
1008	fi;;
1009	(ibmy) queue=parallel;;
1010	(lctit) queue=default;;
1011	(nech) queue=none;;
1012	(neck) queue=P;;
1013	(unics) queue=unics;;
1014	esac
1015	fi
1016
1017
1018	# EVTL. NETCDF-UNTERSTUETZUNG SETZEN
1019	case $host in
1020	(decalpha) netcdf_support=true
1021	netcdf_path=/usr/local/netcdf-3.5.1;;
1022	(ibmb\|ibmh) netcdf_support=true
1023	netcdf_path=/aws/dataformats/netcdf-3.6.0-p1/64-32;;
1024	(ibms) netcdf_support=true
1025	netcdf_path=/applic/lib/NETCDF64;;
1026	(ibmy) netcdf_support=true
1027	netcdf_path=/usr1/users/raasch/pub/netcdf-3.6.0-p1;;
1028	(lcmuk) netcdf_support=true
1029	if [[ $scirocco = true ]]
1030	then
1031	netcdf_path=/opt/netcdf/3.6.2-beta4
1032	else
1033	netcdf_path=/muksoft/packages/netcdf/linux
1034	fi;;
1035	(lctit) netcdf_support=true
1036	netcdf_path=/home2/usr5/mkanda/netcdf-3.6.1;;
1037	(nech) netcdf_support=true
1038	netcdf_path=/pool/SX-6/netcdf/netcdf-3.6.0-p1;;
1039	(neck) netcdf_support=true
1040	netcdf_path=/home/DSRC/NC/tatuyama/pub/netcdf-3.6.0-p1;;
1041	esac
1042
1043
1044	# VOLLSTAENDIGE DATEINAMEN DER INPUT-FILES BILDEN,
1045	# INPUT-DATEIEN AUF VORHANDENSEIN PRUEFEN UND EVTL. HOECHSTE ZYKLUSNUMMER
1046	# ERMITTELN
1047	(( i = 0 ))
1048	while (( i < iin ))
1049	do
1050	(( i = i + 1 ))
1051	(( maxcycle = 0 ))
1052
1053	# NAMENSBILDUNG (EVTL. IST FESTER DATEINAME VORGEGEBEN)
1054	if [[ "${actionin[$i]}" = di ]]
1055	then
1056	remotepathin[$i]=${pathin[$i]}/${endin[$i]} # REMOTE-PFAD ERST AUF
1057	# REM-MASCHINE AUSWERTEN
1058	eval filename=${pathin[$i]}/${endin[$i]}
1059	else
1060	remotepathin[$i]=${pathin[$i]}/${afname}${endin[$i]} # REMOTE-PFAD ERST AUF
1061	# REM-MASCHINE AUSWERTEN
1062	eval filename=${pathin[$i]}/${afname}${endin[$i]}
1063	fi
1064
1065	# PRUEFEN AUF VORHANDENSEIN
1066	if [[ $(ls $filename* 2>&1 \| grep -c "not found") = 1 \|\| \
1067	$(ls $filename* 2>&1 \| grep -c "No such file") = 1 \|\| \
1068	$(ls $filename* 2>&1 \| grep -c "does not exist") = 1 ]]
1069	then
1070	# DATEIEN MIT EXTENSION (Z.B. NC) MUESSEN NICHT ZWINGEND VORHANDEN
1071	# SEIN, DESHALB IN SOLCHEN FAELLEN KEIN ABBRUCH. DIES IST NUR EINE
1072	# VORUEBERGEHENDE LOESUNG (OKT 05). NICHT ZWINGEND BENOETIGTE
1073	# EINGABEDATEIEN SOLLTEN EINE SPEZIELLE OPTION IN DER DATEI-
1074	# VERBINDUNGSANWEISUNG BEKOMMEN (Z.B. inopt?)
1075	if [[ "${transin[$i]}" != "locopt" ]]
1076	then
1077	printf "\n\n +++ INPUT-file: "
1078	if [[ "${extin[$i]}" = "" ]]
1079	then
1080	printf "\n $filename"
1081	else
1082	printf "\n $filename.${extin[$i]}"
1083	fi
1084	printf "\n does not exist\n"
1085	locat=input; exit
1086	else
1087	transin[$i]="unavailable"
1088	fi
1089	else
1090
1091	# ZYKLUSNUMMER FESTSTELLEN
1092	ls -1 -d $filename > filelist 2>/dev/null
1093	ls -1 -d $filename.* >> filelist 2>/dev/null
1094	while read zeile
1095	do
1096	cycle=$(print $zeile \| cut -f2 -d".")
1097	if [[ "$cycle" = "$zeile" ]]
1098	then
1099	(( icycle = 0 ))
1100	elif [[ "$cycle" = "${extin[$i]}" ]]
1101	then
1102	(( icycle = 0 ))
1103	else
1104	(( icycle = $cycle ))
1105	fi
1106	if (( icycle > maxcycle ))
1107	then
1108	(( maxcycle = icycle ))
1109	file_to_be_used=$zeile
1110	fi
1111	done <filelist
1112	rm filelist
1113
1114	# EVTL. ZYKLUSNUMMER AN DATEINAMEN ANFUEGEN
1115	if (( maxcycle > 0 ))
1116	then
1117	if [[ "${extin[$i]}" != " " && "${extin[$i]}" != "" ]]
1118	then
1119	filename=${filename}.$maxcycle.${extin[$i]}
1120	else
1121	filename=${filename}.$maxcycle
1122	fi
1123	else
1124	if [[ "${extin[$i]}" != " " && "${extin[$i]}" != "" ]]
1125	then
1126	filename=${filename}.${extin[$i]}
1127	fi
1128	fi
1129
1130	# DATEINAMEN OHNE PFAD ABER MIT ZYKLUSNUMMER ABSPEICHERN,
1131	# DA SPAETER BEI RUECKSPEICHERN VOM ARCHIVSYSTEM EVTL. BENOETIGT
1132	absnamein[$i]=$filename
1133	if (( maxcycle > 0 ))
1134	then
1135	if [[ "${actionin[$i]}" = di ]]
1136	then
1137	frelin[$i]=${endin[$i]}.$maxcycle
1138	else
1139	frelin[$i]=${afname}${endin[$i]}.$maxcycle
1140	fi
1141	else
1142	if [[ "${actionin[$i]}" = di ]]
1143	then
1144	frelin[$i]=${endin[$i]}
1145	else
1146	frelin[$i]=${afname}${endin[$i]}
1147	fi
1148	fi
1149
1150	fi
1151	done
1152
1153
1154	# VOLLSTAENDIGE DATEINAMEN (OHNE $ ODER ~) DER OUTPUT-FILES BILDEN,
1155	# OUTPUT-DATEIEN AUF VORHANDENSEIN PRUEFEN UND EVTL. HOECHSTE ZYKLUSNUMMER
1156	# ERMITTELN ODER, FALLS NICHT VORHANDEN, PRUEFEN, OB SIE SICH ANLEGEN LASSEN
1157	# DIESE AKTIONEN FINDEN NICHT STATT, WENN PROGRAMM AUF REMOTE-MASCHINE
1158	# RECHNET UND DATEI ANSCHLIESSEND TRANSFERIERT WERDEN SOLL!
1159	(( i = 0 ))
1160	while (( i < iout ))
1161	do
1162	(( i = i + 1 ))
1163	if [[ ! ( $fromhost != $localhost && ( "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = tra \|\| "${actionout[$i]}" = trpe ) ) ]]
1164	then
1165	if [[ "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = trpe ]]
1166	then
1167	actionout[$i]=""
1168	elif [[ "${actionout[$i]}" = tra ]]
1169	then
1170	actionout[$i]=a
1171	fi
1172	(( maxcycle = 0 ))
1173	eval filename=${pathout[$i]}/${fname}${endout[$i]}
1174	eval catalogname=${pathout[$i]}
1175	if [[ $(ls $filename* 2>&1 \| grep -c "not found") = 1 \|\| \
1176	$(ls $filename* 2>&1 \| grep -c "No such file") = 1 \|\| \
1177	$(ls $filename* 2>&1 \| grep -c "does not exist") = 1 ]]
1178	then
1179
1180	# OUTPUT-DATEI NICHT VORHANDEN. PRUEFEN, OB ANLEGEN MOEGLICH.
1181	if cat /dev/null > $filename
1182	then
1183	rm $filename
1184	else
1185
1186	# PRUEFEN, OB KATALOG VORHANDEN UND EVTL. DIESEN ANLEGEN
1187	if [[ ! -d $catalogname ]]
1188	then
1189	if mkdir -p $catalogname
1190	then
1191	printf "\n\n *** directory:"
1192	printf "\n $catalogname"
1193	printf "\n was created\n"
1194	else
1195	printf "\n\n +++ OUTPUT-file:"
1196	printf "\n $filename"
1197	printf "\n cannot be created, because directory does not exist"
1198	printf "\n and cannot be created either"
1199	printf "\n"
1200	locat=output ; exit
1201	fi 2>/dev/null
1202	else
1203	printf "\n\n +++ OUTPUT-file:"
1204	printf "\n $filename"
1205	printf "\n cannot be created, although directory exists"
1206	printf "\n"
1207	locat=output ; exit
1208	fi
1209	fi 2>/dev/null
1210	else
1211
1212	# ZYKLUSNUMMER FESTSTELLEN
1213	ls -1 -d $filename > filelist 2>/dev/null
1214	ls -1 -d $filename.* >> filelist 2>/dev/null
1215	while read zeile
1216	do
1217	cycle=$(print $zeile \| cut -f2 -d".")
1218	if [[ "$cycle" = "$zeile" \|\| "$cycle" = ${extout[$i]} ]]
1219	then
1220	(( icycle = 1 ))
1221	else
1222	(( icycle = $cycle + 1 ))
1223	fi
1224	if (( icycle > maxcycle ))
1225	then
1226	(( maxcycle = icycle ))
1227	fi
1228	done <filelist
1229	rm filelist
1230	fi
1231
1232	# EVTL. ZYKLUSNUMMER AN DATEINAMEN ANFUEGEN UND PRUEFEN, OB SICH
1233	# DATEI AUCH WIRKLICH ANLEGEN LAESST. IM APPEND-FALL MUSS AN DEN
1234	# HOECHSTEN VORHANDENEN ZYKLUS-ANGEHAENGT WERDEN. ANLAGEPRUEFUNG
1235	# IST DANN NATUERLICH NICHT ZULAESSIG BZW. MOEGLICH
1236	if [[ "${actionout[$i]}" != a ]]
1237	then
1238	if (( maxcycle > 0 ))
1239	then
1240	filename=${filename}.$maxcycle
1241	if cat /dev/null > $filename
1242	then
1243	rm $filename
1244	else
1245	printf "\n +++ OUTPUT-file:"
1246	printf "\n $filename"
1247	printf "\n cannot be created"
1248	locat=output ; exit
1249	fi
1250	fi
1251	else
1252	(( maxcycle = maxcycle - 1 ))
1253	if (( maxcycle > 0 ))
1254	then
1255	filename=${filename}.$maxcycle
1256	fi
1257	fi
1258
1259	# DATEINAMEN OHNE PFAD ABER MIT ZYKLUSNUMMER ABSPEICHERN,
1260	# DA SPAETER BEI ABLAGE AUF ARCHIVSYSTEM BZW. FUER
1261	# DATEI OUTPUT_FILE_CONNECTIONS EVTL. BENOETIGT
1262	pathout[$i]=$filename
1263	if (( maxcycle > 0 ))
1264	then
1265	frelout[$i]=${fname}${endout[$i]}.$maxcycle
1266	else
1267	frelout[$i]=${fname}${endout[$i]}
1268	fi
1269
1270	fi
1271	done
1272
1273
1274	# PRUEFEN, OB ENTWEDER HAUPTPROGRAMM ODER NUR EIN AUSFUEHRBARES
1275	# PROGRAMM VEREINBART WURDE (IN DIESEM FALL BRAUCHT IM WEITEREN NICHT
1276	# UEBERSETZT ZU WERDEN)
1277	if [[ "$mainprog" = "" && "$executable" = "" ]]
1278	then
1279	printf "\n +++ neither main program nor executable defined"
1280	locat=source; exit
1281	elif [[ "$mainprog" != "" && "$executable" != "" ]]
1282	then
1283	printf "\n +++ main program as well as executable defined"
1284	locat=source; exit
1285	elif [[ "$mainprog" = "" && "$executable" != "" ]]
1286	then
1287	do_compile=false
1288	fi
1289
1290
1291	# ALLE ZU UEBERSETZENDEN PROGRAMMTEILE ZUSAMMENSAMMELN
1292	# BEI BATCH-JOBS IST DIES NICHT NOETIG, WEIL DIE PROGRAMMTEILE BEREITS DURCH
1293	# DEN MRUN-AUFRUF ERMITTELT SIND, DER DEN BATCH-JOB GENERIERT HAT, UND
1294	# IM VERZEICHNIS SOURCES_FOR_RUN_... ABGELEGT SIND
1295	if [[ $do_compile = true && "$SOURCES_COMPLETE" = "" ]]
1296	then
1297
1298	[[ "$source_list" = LM ]] && source_list=LOCALLY_MODIFIED
1299	[[ "$source_list" = WP ]] && source_list=WRITE_PERMIT
1300
1301	if [[ $restart_run != true ]]
1302	then
1303	rm -rf SOURCES_FOR_RUN_$fname
1304	mkdir SOURCES_FOR_RUN_$fname
1305	fi
1306
1307
1308	# EVTL. ZU UEBERSETZENDE PROGRAMMTEILE DADURCH BESTIMMEN, DASS GEPRUEFT
1309	# WIRD, WELCHE DATEIEN WRITE-PERMIT BESITZEN (DATEIEN SOLLTEN DESHALB
1310	# UNTER RCS-KONTROLLE STEHEN). MIT DER VARIABLEN EXCLUDE KOENNEN
1311	# BESTIMMTE DATEIEN GRUNDSAETZLICH VON DER UEBERSETZUNG AUSGESCHLOSSEN
1312	# WERDEN. DIES IST NUR BEI MANUELLEM START VON MRUN DURCH DEN BENUTZER
1313	# MOEGLICH, DA BEI AUTOMATISCHEN RESTARTS TEST DURCH DIE TATSAECHLICH
1314	# ZU UBERSETZENDEN DATEIEN ERSETZT IST.
1315	# ALLE ERMITTELTEN DATEIEN WERDEN IM VERZEICHNIS SOURCES_FOR_RUN_...
1316	# GESAMMELT
1317	if [[ "$source_list" = WRITE_PERMIT ]]
1318	then
1319
1320	source_list=""
1321	cd $source_path
1322
1323
1324	# ALLE MOEGLICHEN QUELLCODEDATEIEN AUFLISTEN
1325	Names=$(ls -1 *.f90 2>&1)
1326	[[ $(echo $Names \| grep -c '*.f90') = 0 ]] && Filenames="$Names"
1327	Names=$(ls -1 *.F90 2>&1)
1328	[[ $(echo $Names \| grep -c '*.F90') = 0 ]] && Filenames="$Filenames $Names"
1329	Names=$(ls -1 *.F 2>&1)
1330	[[ $(echo $Names \| grep -c '*.F') = 0 ]] && Filenames="$Filenames $Names"
1331	Names=$(ls -1 *.f 2>&1)
1332	[[ $(echo $Names \| grep -c '*.f') = 0 ]] && Filenames="$Filenames $Names"
1333	Names=$(ls -1 *.c 2>&1)
1334	[[ $(echo $Names \| grep -c '*.c') = 0 ]] && Filenames="$Filenames $Names"
1335
1336
1337	# DATEIEN MIT WRITE-PERMIT NACH SOURCES_FOR_RUN_... KOPIEREN
1338	for dateiname in $Filenames
1339	do
1340	if [[ -w $dateiname ]]
1341	then
1342	if [[ "$exclude" = "" \|\| $(echo $exclude \| grep -c $dateiname) = 0 ]]
1343	then
1344	cp $dateiname $working_directory/SOURCES_FOR_RUN_$fname
1345	source_list=$source_list"$dateiname "
1346	fi
1347	fi
1348	done
1349
1350	cd - > /dev/null
1351
1352
1353	elif [[ "$source_list" = LOCALLY_MODIFIED ]]
1354	then
1355
1356	# MODIFIZIERTE DATEIEN DER SVN-ARBEITSKOPIE BESTIMMEN
1357	source_list=""
1358	cd $source_path
1359
1360
1361	# PRUEFEN, OB VERZEICHNIS UEBERHAUPT UNTER SVN-KONTROLLE STEHT
1362	if [[ ! -d .svn ]]
1363	then
1364	printf "\n\n +++ source directory"
1365	printf "\n \"$source_path\" "
1366	printf "\n is not under control of \"subversion\"."
1367	printf "\n Please do not use mrun-option \"-s LOCALLY MODIFIED\"\n"
1368	fi
1369
1370
1371	# ALLE MODIFIZIERTEN QUELLCODEDATEIEN AUFLISTEN
1372	Filenames=""
1373	svn status \| while read line
1374	do
1375	firstc=`echo $line \| cut -c1`
1376	if [[ $firstc = M \|\| $firstc = "?" ]]
1377	then
1378	Name=`echo "$line" \| cut -c8-`
1379	extension=`echo $Name \| cut -d. -f2`
1380	if [[ "$extension" = f90 \|\| "$extension" = F90 \|\| "$extension" = f \|\| "$extension" = F \|\| "$extension" = c ]]
1381	then
1382	Filenames="$Filenames "$Name
1383	fi
1384	fi
1385	done
1386
1387
1388	# DATEIEN NACH SOURCES_FOR_RUN_... KOPIEREN
1389	for dateiname in $Filenames
1390	do
1391	cp $dateiname $working_directory/SOURCES_FOR_RUN_$fname
1392	source_list=$source_list"$dateiname "
1393	done
1394
1395	cd - > /dev/null
1396
1397
1398	# MITTELS OPTION -s ANGEGEBENE DATEIEN NACH SOURCES_FOR_RUN_... KOPIEREN
1399	# BEI AUTOMATISCHEN FORTSETZUNGSLAEUFEN SIND DORT SCHON ALLE DATEIEN
1400	# VORHANDEN
1401	elif [[ "$source_list" != "" && $restart_run != true ]]
1402	then
1403
1404	cd $source_path
1405
1406	for filename in $source_list
1407	do
1408
1409	# QUELLTEXT-DATEI DARF KEINE PFADE BEINHALTEN
1410	if [[ $(print $filename \| grep -c "/") != 0 ]]
1411	then
1412	printf "\n +++ source code file: $filename"
1413	printf "\n must not contain (\"/\") "
1414	locat=source; exit
1415	fi
1416
1417	if [[ ! -f $filename ]]
1418	then
1419	printf "\n +++ source code file: $filename"
1420	printf "\n does not exist"
1421	locat=source; exit
1422	else
1423	cp $filename $working_directory/SOURCES_FOR_RUN_$fname
1424	fi
1425
1426	done
1427
1428	cd - > /dev/null
1429
1430	fi
1431
1432
1433	# PRUEFEN, OB ENTWEDER HAUPTPROGRAMM VORHANDEN UND ES EVTL. IN DER
1434	# LISTE DER ZU UEBERSETZENDEN PROGRAMMTEILE MIT ENTHALTEN IST (WENN
1435	# NICHT, WIRD ES DIESER LISTE HINZUGEFUEGT)
1436	if [[ $restart_run != true ]]
1437	then
1438
1439	if [[ ! -f "$source_path/$mainprog" ]]
1440	then
1441	printf "\n\n +++ main program: $mainprog"
1442	printf "\n does not exist in source directory"
1443	printf "\n \"$source_path\"\n"
1444	locat=source; exit
1445	else
1446	if [[ $(echo $source_list \| grep -c $mainprog) = 0 ]]
1447	then
1448	cp $source_path/$mainprog SOURCES_FOR_RUN_$fname
1449	source_list=${mainprog}" $source_list"
1450	fi
1451	fi
1452	fi
1453
1454
1455	# DATEIEN AUS ZUSAETZLICHEM QUELLVERZEICHNIS HINZUFUEGEN
1456	if [[ $restart_run != true && "$add_source_path" != "" ]]
1457	then
1458
1459	# GIBT ES DAS VERZEICHNIS UEBERHAUPT?
1460	if [[ ! -d $add_source_path ]]
1461	then
1462	printf "\n\n +++ WARNING: additional source code directory"
1463	printf "\n \"$add_source_path\" "
1464	printf "\n does not exist or is not a directory."
1465	printf "\n No source code will be used from this directory!\n"
1466	add_source_path=""
1467	sleep 3
1468	else
1469
1470	cd $add_source_path
1471
1472	Names=$(ls -1 *.f90 2>&1)
1473	[[ $(echo $Names \| grep -c '*.f90') = 0 ]] && AddFilenames="$Names"
1474	Names=$(ls -1 *.F90 2>&1)
1475	[[ $(echo $Names \| grep -c '*.F90') = 0 ]] && AddFilenames="$AddFilenames $Names"
1476	Names=$(ls -1 *.F 2>&1)
1477	[[ $(echo $Names \| grep -c '*.F') = 0 ]] && AddFilenames="$AddFilenames $Names"
1478	Names=$(ls -1 *.f 2>&1)
1479	[[ $(echo $Names \| grep -c '*.f') = 0 ]] && AddFilenames="$AddFilenames $Names"
1480	Names=$(ls -1 *.c 2>&1)
1481	[[ $(echo $Names \| grep -c '*.c') = 0 ]] && AddFilenames="$AddFilenames $Names"
1482
1483	cd - > /dev/null
1484	cd SOURCES_FOR_RUN_$fname
1485
1486	for dateiname in $AddFilenames
1487	do
1488	if [[ -f $dateiname ]]
1489	then
1490	printf "\n +++ source code file \"$dateiname\" found in additional"
1491	printf "\n source code directory \"$add_source_path\" "
1492	printf "\n as well as in directory \"$source_path\"."
1493	locat=source; exit
1494	fi
1495
1496	cp $add_source_path/$dateiname .
1497	source_list="$source_list $dateiname"
1498
1499	# Default User-Interface von der Liste entfernen, falls Datei
1500	# ein User-Interface enthaelt
1501	if [[ $( cat $dateiname \| grep -c "END SUBROUTINE user_parin" ) != 0 ]]
1502	then
1503	if [[ -f user_interface.f90 ]]
1504	then
1505	rm -rf user_interface.f90
1506	source_list=`echo $source_list \| sed -e 's/user_interface.f90//'`
1507	printf "\n\n *** \"user_interface.f90\" removed from the files to be translated"
1508	printf "\n since a user-interface is found in file"
1509	printf "\n \"$add_source_path/$dateiname\" \n"
1510	sleep 3
1511	else
1512	printf "\n\n *** user-interface file \"$dateiname\" "
1513	printf "\n added to the files to be translated \n"
1514	sleep 3
1515	fi
1516	fi
1517	done
1518
1519	cd - > /dev/null
1520	fi
1521	fi
1522
1523
1524	# ALLE UNTERPROGRAMME, DIE ZU VEREINBARTEN SOFTWAREPAKETEN GEHOEREN,
1525	# DER LISTE DER ZU UEBERSETZENDEN DATEIEN HINZUFUEGEN
1526	if [[ $restart_run != true && -n $package_list ]]
1527	then
1528
1529	cd $source_path
1530
1531	for package in $package_list
1532	do
1533
1534	[[ $package = "dvrp_graphics+1PE" ]] && package=dvrp_graphics
1535
1536	# ERMITTELE ALLE DATEIEN, DIE ZUM PAKET GEHOEREN
1537	# FEHLERMELDUNGEN WERDEN ABGEFANGEN, DA * AUCH VERZEICHNISSNAMEN
1538	# LIEFERT
1539	package_source_list=`grep "defined( __$package " * 2>/dev/null \| cut -f1 -d:`
1540
1541
1542	# FUEGE DIESE DATEIEN DER LISTE DER ZU UEBERSETZENDEN DATEIEN
1543	# HINZU, FALLS SIE NOCH NICHT DAZUGEHOEREN
1544	for source_list_name in $package_source_list
1545	do
1546	if [[ $(echo $source_list \| grep -c $source_list_name) = 0 ]]
1547	then
1548
1549	# NUR DATEIEN MIT GUELTIGEN ENDUNGEN VERWENDEN
1550	ending=`echo $source_list_name \| cut -f2 -d.`
1551	if [[ "$ending" = f90 \|\| "$ending" = F90 \|\| "$ending" = f \|\| "$ending" = F \|\| "$ending" = c ]]
1552	then
1553	cp $source_list_name $working_directory/SOURCES_FOR_RUN_$fname
1554	source_list="$source_list $source_list_name"
1555	fi
1556	fi
1557	done
1558	done
1559
1560	cd - > /dev/null
1561	fi
1562
1563
1564	# MAKEFILE AUF VORHANDENSEIN PRUEFEN UND KOPIEREN
1565	# BEI RESTART-LAEUFEN LIEGT ES SCHON IM VERZEICHNIS SOURCES_FOR_RUN...
1566	if [[ "$use_makefile" = true && "$restart_run" != true ]]
1567	then
1568	[[ "$makefile" = "" ]] && makefile=$source_path/Makefile
1569	if [[ ! -f $makefile ]]
1570	then
1571	printf "\n +++ file \"$makefile\" does not exist"
1572	printf "\n provide this file or set \"use_makefile=false\" in configuration file\n"
1573	locat=make; exit
1574	else
1575	cp $makefile SOURCES_FOR_RUN_$fname/Makefile
1576	fi
1577	fi
1578
1579	fi # do_compile=true
1580
1581
1582	# FALLS PROGRAMMTEILE UEBERSETZT WERDEN SOLLEN, FOLGEN JETZT EINIGE
1583	# UEBERPRUEFUNGEN UND DAS SETZEN DER PRAEPROZESSOR-DIREKTIVEN
1584	if [[ $do_compile = true ]]
1585	then
1586
1587	# PRAEPROZESSOR-DIREKTIVEN ZUM SELEKTIVEN AUSWAEHLEN VON CODETEILEN
1588	# ZUSAMMENSETZEN
1589	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1590	then
1591	PPOPTS=-Dibm=ibm
1592	elif [[ $(echo $localhost \| cut -c1-3) = nec ]]
1593	then
1594	PPOPTS=-Dnec
1595	else
1596	PPOPTS=-D$localhost
1597	fi
1598	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1599	then
1600	[[ -n $cond1 ]] && PPOPTS="$PPOPTS -D$cond1=$cond1"
1601	[[ -n $cond2 ]] && PPOPTS="$PPOPTS -D$cond2=$cond2"
1602	if [[ $netcdf_support = true ]]
1603	then
1604	PPOPTS="$PPOPTS -Dnetcdf=netcdf"
1605	[[ $localhost != ibms ]] && PPOPTS="$PPOPTS -Dnetcdf_64bit=netcdf_64bit"
1606	fi
1607	if [[ $localhost = ibmy ]]
1608	then
1609	PPOPTS="$PPOPTS -Dibmy_special=ibmy_special"
1610	fi
1611	else
1612	[[ -n $cond1 ]] && PPOPTS="$PPOPTS -D$cond1"
1613	[[ -n $cond2 ]] && PPOPTS="$PPOPTS -D$cond2"
1614	if [[ $netcdf_support = true ]]
1615	then
1616	PPOPTS="$PPOPTS -Dnetcdf"
1617	[[ $localhost != decalpha && $localhost != lctit ]] && PPOPTS="$PPOPTS -Dnetcdf_64bit"
1618	fi
1619	fi
1620	if [[ -n $package_list ]]
1621	then
1622	for package in $package_list
1623	do
1624	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1625	then
1626	if [[ $package != "dvrp_graphics+1PE" ]]
1627	then
1628	PPOPTS="$PPOPTS -D$package=$package"
1629	else
1630	PPOPTS="$PPOPTS -Ddvrp_graphics"
1631	export use_seperate_pe_for_dvrp_output=true
1632	fi
1633	else
1634	if [[ $package != "dvrp_graphics+1PE" ]]
1635	then
1636	PPOPTS="$PPOPTS -D$package"
1637	else
1638	PPOPTS="$PPOPTS -Ddvrp_graphics"
1639	export use_seperate_pe_for_dvrp_output=true
1640	fi
1641	fi
1642	done
1643	fi
1644	if [[ -n $cpp_opts ]]
1645	then
1646	for popts in $cpp_opts
1647	do
1648	PPOPTS="$PPOPTS -D$popts"
1649	done
1650	fi
1651
1652	# -D ARGUMENTEN EINEN DOPPELTEN UNTERSTRICH VORANSTELLEN
1653	PPOPTS=`echo " $PPOPTS" \| sed 's/ -D/ -D__/g'`
1654
1655	# OPTION ZUM EINSCHALTEN DES PRAEPROZESSORS HINZUFUEGEN
1656	if [[ $host = decalpha ]]
1657	then
1658	C_PPOPTS="-cpp -DMPI_REAL=MPI_DOUBLE_PRECISION -DMPI_2REAL=MPI_2DOUBLE_PRECISION $PPOPTS"
1659	elif [[ $(echo $host \| cut -c1-3) = ibm ]]
1660	then
1661	# blanks in PPOPTS muessen durch "," ersetzt werden
1662	PPOPTS=`echo $PPOPTS \| sed 's/ -/,-/g'`
1663	C_PPOPTS="-qsuffix=cpp=f90 -WF,-DMPI_REAL=MPI_DOUBLE_PRECISION,$PPOPTS"
1664	elif [[ $host = lcmuk ]]
1665	then
1666	C_PPOPTS="$PPOPTS -DMPI_REAL=MPI_DOUBLE_PRECISION -DMPI_2REAL=MPI_2DOUBLE_PRECISION"
1667	elif [[ $host = lctit ]]
1668	then
1669	C_PPOPTS="$PPOPTS -Mpreprocess -DMPI_REAL=MPI_DOUBLE_PRECISION -DMPI_2REAL=MPI_2DOUBLE_PRECISION"
1670	elif [[ $(echo $host \| cut -c1-3) = nec ]]
1671	then
1672	C_PPOPTS="-Ep -DMPI_REAL=MPI_REAL8 -DMPI_2REAL=MPI_2REAL8 -DSCFFT=dzfft -DCSFFT=zdfft $PPOPTS"
1673	else
1674	C_PPOPTS="$PPOPTS"
1675	fi
1676
1677	else
1678
1679
1680	# BEI LOKALEN RECHNUNGEN PRUEFEN, OB EXECUTABLE VORHANDEN
1681	if [[ $do_remote = false ]]
1682	then
1683	if [[ ! -f $executable ]]
1684	then
1685	printf "\n +++ executable file: $executable"
1686	printf "\n does not exist"
1687	locat=executable; exit
1688	fi
1689	fi
1690	fi
1691
1692
1693	# JOBMODUS FESTSTELLEN
1694	if [[ "$ENVIRONMENT" = BATCH && $localhost != lctit \|\| "$QUEUE" != interactive && $localhost = lctit ]]
1695	then
1696	jobmo=BATCH
1697	else
1698	jobmo=INTERACTIVE
1699	fi
1700
1701
1702	# HOSTSPEZIFISCHE DEFAULT-COMPILER SETZEN, FALLS NICHT BEREITS
1703	# DURCH BENUTZER ANDERWEITIG VEREINBART
1704	if [[ "$compiler_name" = "" ]]
1705	then
1706	case $localhost in
1707	(unics) compiler_name=f77;;
1708	(lcmuk) if [[ "$cond1" = parallel \|\| "$cond2" = parallel ]]
1709	then
1710	compiler_name=mpif90
1711	else
1712	compiler_name=ifc
1713	fi;;
1714	(lctit) if [[ "$cond1" = parallel \|\| "$cond2" = parallel ]]
1715	then
1716	compiler_name=mpif90
1717	echo ">>> compiler=mpif90"
1718	else
1719	compiler_name=pgf95
1720	echo ">>> compiler=pgf95"
1721	fi;;
1722	(nech) compiler_name=sxmpif90;;
1723	(decalpha) compiler_name=f95;;
1724	(ibm\|ibmb\|ibmh\|ibms\|ibmy) compiler_name=mpxlf95_r;;
1725	(*) printf "\n +++ unknown host name: $localhost \n";
1726	locat=localhost; exit;;
1727	esac
1728	fi
1729
1730
1731	# COMPILER AUF NECK UEBERSCHREIBEN
1732	[[ $localhost = neck ]] && compiler_name=mpif90
1733
1734
1735
1736	# PRAEPROZESSOR-PFAD BESTIMMEN
1737	case $localhost in
1738	(decalpha\|ibm\|ibmb\|ibmh\|ibms\|ibmy\|unics) praeproc=cpp;;
1739	esac
1740
1741
1742	# TEMPORAEREN KATALOGNAMEN BESTIMMEN
1743	kennung=$RANDOM
1744	if [[ "$tmp_user_catalog" = "" ]]
1745	then
1746	if [[ $localhost = ibmb \|\| $localhost = ibmh ]]
1747	then
1748	tmp_user_catalog=$TMPDIR
1749	elif [[ $localhost = nech ]]
1750	then
1751	tmp_user_catalog=$WRKSHR
1752	else
1753	tmp_user_catalog=/tmp
1754	fi
1755	fi
1756	TEMPDIR=$tmp_user_catalog/${usern}.$kennung
1757
1758
1759	# KATALOGNAMEN FUER ZWISCHENSPEICHERUNG VON FORTSETZUNGSLAUFDATEIEN
1760	# BESTIMMEN
1761	if [[ "$tmp_data_catalog" = "" ]]
1762	then
1763	if [[ $localhost = ibmb \|\| $localhost = ibmh ]]
1764	then
1765	tmp_data_catalog=$WORK/mrun_restart_data
1766	elif [[ $localhost = nech ]]
1767	then
1768	tmp_data_catalog=$WRKSHR/mrun_restart_data
1769	else
1770	tmp_data_catalog=/tmp/mrun_restart_data
1771	fi
1772	fi
1773
1774
1775	# EVENTUELL BEI LOKALEN RECHNUNGEN $-ZEICHEN IN ENVIRONMENT-VARIABLEN
1776	# ERSETZEN
1777	if [[ $do_remote = false && $do_compile = true ]]
1778	then
1779	eval fopts=\"$fopts\"
1780	eval lopts=\"$lopts\"
1781	fi
1782
1783
1784
1785	# COMPILE- UND LINK-OPTIONEN BESTIMMEN
1786	FOPTS="$fopts"
1787	LOPTS="$lopts"
1788	ROPTS="$ropts"
1789	if [[ ( $(echo $host \| cut -c1-3) = nec \|\| $(echo $host \| cut -c1-3) = ibm \|\| $host = lctit ) && -n $numprocs ]]
1790	then
1791	XOPT="-X $numprocs"
1792	fi
1793
1794
1795	# BEI VERWENDUNG VON DVRP-SOFTWARE MUSS ENTSPECHENDE GRAFIK-BIBLIOTHEK
1796	# MIT EINGEBUNDEN WERDEN
1797	if [[ -n $package_list ]]
1798	then
1799	if [[ $(echo $package_list \| grep -c dvrp_graphics) != 0 ]]
1800	then
1801
1802	# DVRP-GRAFIK GIBT ES NUR AUF DER IBM AM HLRN, AUF NECH UND
1803	# DEM NOTEBOOK SCIROCCO
1804	if [[ $host != ibmh && $host != nech && $host != lcmuk && "$local_compile" != true ]]
1805	then
1806	printf "\n"
1807	printf "\n +++ option -p with package \"dvrp_graphics\" only allowed on nech and ibmh"
1808	locat=parameter; exit
1809	fi
1810	if [[ $host = ibmh ]]
1811	then
1812	if [[ $cond1 = debug \|\| $cond2 = debug ]]
1813	then
1814	FOPTS="-I/home/h/hzazchmi/lib/debug $FOPTS"
1815	LOPTS="$LOPTS -L/home/h/hzazchmi/lib/debug -lDVRP2 -lftp"
1816	else
1817	FOPTS="-I/home/h/nikevita/lib_stable/optimize $FOPTS"
1818	LOPTS="$LOPTS -L/home/h/nikevita/lib_stable/optimize -lDVRP2 -lftp"
1819	fi
1820	elif [[ $host = nech ]]
1821	then
1822	FOPTS="-I/import/ds9b/ipf2/b/b323013/lib/optimize $FOPTS"
1823	LOPTS="$LOPTS -L/import/ds9b/ipf2/b/b323013/lib/optimize -lDVRP2 -lftp"
1824	elif [[ $host = lcmuk ]]
1825	then
1826	FOPTS="-I/usr/local/lib/dvrp/optimize $FOPTS"
1827	LOPTS="$LOPTS -L/usr/local/lib/dvrp/optimize -lDVRP2 -lftp"
1828	fi
1829	fi
1830	fi
1831
1832
1833	# EVTL. EINBINDEN DER NETCDF-BIBLIOTHEK
1834	if [[ $netcdf_support = true ]]
1835	then
1836	case $host in
1837	(decalpha) FOPTS="-I${netcdf_path}/include $FOPTS"
1838	LOPTS="$LOPTS -L${netcdf_path}/lib -lnetcdf";;
1839	(ibmb\|ibmh) FOPTS="-I ${netcdf_path}/include-64 $FOPTS"
1840	LOPTS="$LOPTS -L${netcdf_path}/lib -lnetcdf";;
1841	(ibms) FOPTS="-I /applic/netcdf64/src/f90 $FOPTS"
1842	LOPTS="$LOPTS -L${netcdf_path} -lnetcdf";;
1843	(ibmy) FOPTS="-I ${netcdf_path}/include $FOPTS"
1844	LOPTS="$LOPTS -L${netcdf_path}/lib -lnetcdf";;
1845	(lcmuk\|nech\|neck) FOPTS="-I ${netcdf_path}/include $FOPTS"
1846	LOPTS="$LOPTS -L${netcdf_path}/lib -lnetcdf";;
1847	(lctit) FOPTS="-I ${netcdf_path}/src/f90 $FOPTS"
1848	LOPTS="$LOPTS -L${netcdf_path}/src/libsrc -lnetcdf";;
1849
1850	esac
1851	fi
1852
1853	# PRUEFEN DER CPU-ZEIT. (CPUMAX WIRD ALS ENV-VARIABLE VOM HAUTPRO-
1854	# GRAMM BENOETIGT
1855	done=false
1856	while [[ $done = false ]]
1857	do
1858	cputime=$cpumax
1859	if (( $cputime == 0 ))
1860	then
1861	printf "\n +++ cpu-time is undefined"
1862	printf "\n >>> Please type CPU-time in seconds as INTEGER:"
1863	printf "\n >>> "
1864	read cputime 1>/dev/null 2>&1
1865	else
1866	done=true
1867	fi
1868	cpumax=$cputime
1869	done
1870
1871	(( minuten = cputime / 60 ))
1872	(( sekunden = cputime - minuten * 60 ))
1873
1874
1875	# PRUEFEN DER KERNSPEICHERANFORDERUNG
1876	if [[ $do_batch = true ]]
1877	then
1878	done=false
1879	while [[ $done = false ]]
1880	do
1881	if (( memory == 0 ))
1882	then
1883	printf "\n +++ memory demand is undefined"
1884	printf "\n >>> Please type memory in MByte per process as INTEGER:"
1885	printf "\n >>> "
1886	read memory 1>/dev/null 2>&1
1887	else
1888	done=true
1889	fi
1890	done
1891	fi
1892
1893
1894	# PRUEFEN, OB FUER REMOTE-RECHNUNGEN EIN BENUTZERNAME ANGEGEBEN WURDE
1895	if [[ $do_remote = true && -z $remote_username ]]
1896	then
1897	while [[ -z $remote_username ]]
1898	do
1899	printf "\n +++ username on remote host \"$host\" is undefined"
1900	printf "\n >>> Please type username:"
1901	printf "\n >>> "
1902	read remote_username
1903	done
1904	mc="$mc -u$remote_username"
1905	fi
1906
1907	###########################################################################
1908	# HEADER-AUSGABE
1909	###########################################################################
1910
1911
1912	calltime=$(date)
1913	printf "\n"
1914	# [[ $silent = false ]] && clear
1915	printf "#--------------------------------------------------------------# \n"
1916	printf "\| $version$calltime \| \n"
1917	printf "\| \| \n"
1918	spalte1="called on:"; spalte2=$localhost_realname
1919	printf "\| $spalte1$spalte2 \| \n"
1920	if [[ $local_compile = false ]]
1921	then
1922	if [[ $do_remote = true ]]
1923	then
1924	spalte1="execution on:"; spalte2="$host (username: $remote_username)"
1925	else
1926	spalte1="execution on:"; spalte2="$host ($localhost_realname)"
1927	fi
1928	else
1929	spalte1="compiling test only!"; spalte2=""
1930	fi
1931	printf "\| $spalte1$spalte2 \| \n"
1932	if [[ -n $numprocs ]]
1933	then
1934	spalte1="number of PEs:"; spalte2=$numprocs
1935	printf "\| $spalte1$spalte2 \| \n"
1936	fi
1937	if [[ -n $tasks_per_node ]]
1938	then
1939	spalte1="tasks per node:"; spalte2="$tasks_per_node (number of nodes: $nodes)"
1940	printf "\| $spalte1$spalte2 \| \n"
1941	fi
1942	if [[ $threads_per_task != 1 ]]
1943	then
1944	spalte1="threads per task:"; spalte2="$threads_per_task"
1945	printf "\| $spalte1$spalte2 \| \n"
1946	fi
1947	printf "\| \| \n"
1948	if [[ $do_compile = true ]]
1949	then
1950	spalte1=cpp-directives:; spalte2=$C_PPOPTS
1951	printf "\| $spalte1$spalte2 \| \n"
1952	zeile=$(echo "$C_PPOPTS" \| cut -c41-)
1953	while [[ "$zeile" != "" ]]
1954	do
1955	spalte1=""
1956	spalte2=$zeile
1957	printf "\| $spalte1$spalte2 \| \n"
1958	zeile=$(echo "$zeile" \| cut -c41-)
1959	done
1960
1961	spalte1=compiler-options:; spalte2="$FOPTS $MODULE_OPTIONS"
1962	printf "\| $spalte1$spalte2 \| \n"
1963	zeile=$(echo "$FOPTS $MODULE_OPTIONS" \| cut -c41-)
1964	while [[ "$zeile" != "" ]]
1965	do
1966	spalte1=""
1967	spalte2=$zeile
1968	printf "\| $spalte1$spalte2 \| \n"
1969	zeile=$(echo "$zeile" \| cut -c41-)
1970	done
1971
1972	spalte1=linker-options:; spalte2=$LOPTS
1973	printf "\| $spalte1$spalte2 \| \n"
1974	zeile=$(echo "$LOPTS" \| cut -c41-)
1975	while [[ "$zeile" != "" ]]
1976	do
1977	spalte1=""
1978	spalte2=$zeile
1979	printf "\| $spalte1$spalte2 \| \n"
1980	zeile=$(echo "$zeile" \| cut -c41-)
1981	done
1982
1983	spalte1="main program":; spalte2=$mainprog
1984	printf "\| $spalte1$spalte2 \| \n"
1985	if [[ "$use_makefile" = true ]]
1986	then
1987	spalte1="using \"make\" for com"; spalte2="piling and linking"
1988	printf "\| $spalte1$spalte2 \| \n"
1989	fi
1990	# if [[ $vtk_graphics = true ]]
1991	# then
1992	# spalte1=""; spalte2="wird in C++ - Programm eingebunden (vtk)"
1993	# printf "\| $spalte1$spalte2 \| \n"
1994	# fi
1995	else
1996	spalte1=executable:; spalte2=$executable
1997	printf "\| $spalte1$spalte2 \| \n"
1998	fi
1999	printf "\| \| \n"
2000	spalte1="base name of files":; spalte2=$fname
2001	printf "\| $spalte1$spalte2 \| \n"
2002	if [[ $fname != $afname ]]
2003	then
2004	spalte1="base name of input files":; spalte2=$afname
2005	printf "\| $spalte1$spalte2 \| \n"
2006	fi
2007	spalte1="INPUT control list":; spalte2=$input_list
2008	printf "\| $spalte1$spalte2 \| \n"
2009	spalte1="OUTPUT control list":; spalte2=$output_list
2010	printf "\| $spalte1$spalte2 \| \n"
2011
2012	if [[ $do_batch = true \|\| "$LOADLBATCH" = yes ]]
2013	then
2014	spalte1="memory demand / PE":; spalte2="$memory MB"
2015	printf "\| $spalte1$spalte2 \| \n"
2016	spalte1=CPU-time:; spalte2="$minuten:$sekunden"
2017	printf "\| $spalte1$spalte2 \| \n"
2018	fi
2019
2020	if [[ $do_compile = true ]]
2021	then
2022	printf "\| \| \n"
2023	printf "\| Files to be compiled: \| \n"
2024	zeile=$source_list
2025	while [[ "$zeile" != "" ]]
2026	do
2027	spalte3=$zeile
2028	printf "\| $spalte3 \| \n"
2029	zeile=$(echo "$zeile" \| cut -c61-)
2030	done
2031	fi
2032	printf "#--------------------------------------------------------------#"
2033
2034
2035
2036	# BEDINGTE AUSGABE DER DATEIVERBINDUNGEN
2037	if [[ $do_trace = true ]]
2038	then
2039	(( i = 0 ))
2040	while (( i < iin ))
2041	do
2042	(( i = i + 1 ))
2043	if (( i == 1 ))
2044	then
2045	printf "\n\n >>> INPUT-file assignments:\n"
2046	fi
2047	printf "\n ${localin[$i]} : ${absnamein[$i]}"
2048	done
2049	(( i = 0 ))
2050	while (( i < iout ))
2051	do
2052	(( i = i + 1 ))
2053	if (( i == 1 ))
2054	then
2055	printf "\n\n >>> OUTPUT-file assignments:\n"
2056	fi
2057	printf "\n ${localout[$i]} : ${pathout[$i]}"
2058	done
2059	(( i = 0 ))
2060	while (( i < iic ))
2061	do
2062	(( i = i + 1 ))
2063	if (( i == 1 ))
2064	then
2065	printf "\n\n >>> INPUT-commands:\n"
2066	fi
2067	printf "\n ${in_command[$i]}"
2068	done
2069	(( i = 0 ))
2070	while (( i < ioc ))
2071	do
2072	(( i = i + 1 ))
2073	if (( i == 1 ))
2074	then
2075	printf "\n\n >>> OUTPUT-commands:\n"
2076	fi
2077	printf "\n ${out_command[$i]}"
2078	done
2079	fi
2080
2081
2082	# ABFRAGEN BEI AUFRUF AUF LOKALER MASCHINE
2083	if [[ $remotecall = false && $silent = false && $jobmo != BATCH ]]
2084	then
2085	antwort=dummy
2086	printf "\n\n"
2087	while [[ "$antwort" != y && "$antwort" != Y && "$antwort" != n && "$antwort" != N ]]
2088	do
2089	printf " >>> everything o.k. (y/n) ? "
2090	read antwort
2091	done
2092	if [[ $antwort = n \|\| $antwort = N ]]
2093	then
2094	locat=user_abort; (( iec = 0 )); exit
2095	fi
2096	if [[ $do_batch = true ]]
2097	then
2098	printf " >>> batch-job will be created and submitted"
2099	else
2100	if [[ $local_compile = false ]]
2101	then
2102	printf " >>> MRUN will now continue to execute on this machine"
2103	else
2104	printf " >>> a test compilation will now be carried out on this machine"
2105	fi
2106	fi
2107	fi
2108
2109
2110
2111
2112	# FALLS AUF DIESER MASCHINE GERECHNET WERDEN SOLL, WERDEN JETZT ENTSPRE-
2113	# CHENDE AKTIONEN DURCHGEFUEHRT
2114	if [[ $do_batch = false ]]
2115	then
2116
2117
2118	# TEMPORAEREN KATALOG ERZEUGEN
2119	mkdir -p $TEMPDIR
2120	chmod go+rx $TEMPDIR
2121	tmpcreate=true
2122
2123
2124	# SAEMTLICHE QUELLTEXT-DATEIEN BZW. AUSFUEHRBARES PROGRAMM IN
2125	# TEMPORAERES VERZEICHNIS KOPIEREN
2126	if [[ $do_compile = true ]]
2127	then
2128
2129	# ON NEC, COMPILATION IS DONE ON HOST CROSS VIA CROSS COMPILING
2130	# CREATE A TEMPORARY DIRECTORY ON THAT MACHINE (HOME MOUNTED VIA NFS)
2131	if [[ $localhost = nech ]]
2132	then
2133	TEMPDIR_COMPILE=$HOME/work/${usern}.$kennung
2134	if mkdir -p $TEMPDIR_COMPILE
2135	then
2136	printf "\n *** \"$TEMPDIR_COMPILE\" "
2137	printf "\n is generated as temporary directory for cross compiling\n"
2138	else
2139	printf "\n +++ creating directory \"$TEMPDIR_COMPILE\" "
2140	printf "\n needed for cross compilation failed"
2141	locat=compile
2142	exit
2143	fi
2144	else
2145	TEMPDIR_COMPILE=$TEMPDIR
2146	fi
2147
2148	if [[ "$use_makefile" = true ]]
2149	then
2150
2151	# PFADNAMEN FUER DAS MAKE-DEPOSITORY ERMITTELN
2152	line=""
2153	grep "%depository_path" $config_file \| while read line
2154	do
2155	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
2156	then
2157	if [[ "$(echo $line \| cut -d" " -s -f3)" = "" ]]
2158	then
2159	global_depository_path=`echo $line \| cut -d" " -s -f2`
2160	fi
2161	fi
2162	done
2163
2164	line=""
2165	grep " $localhost" $config_file \| grep "%depository_path" \| while read line
2166	do
2167	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
2168	then
2169	local_depository_path=`echo $line \| cut -d" " -s -f2`
2170	fi
2171	done
2172
2173	if [[ "$local_depository_path" = "" ]]
2174	then
2175	if [[ "$global_depository_path" != "" ]]
2176	then
2177	local_depository_path=$global_depository_path
2178	else
2179	printf "\n\n +++ no depository path found in configuration file"
2180	printf "\n for local host \"$localhost\" "
2181	printf "\n please set \"\%depository_path\" in configuration file\n"
2182	locat=config_file; exit
2183	fi
2184	fi
2185	eval local_depository_path=$local_depository_path
2186
2187	basename=`print $mainprog \| cut -f1 -d"."`
2188	eval make_depository=${local_depository_path}/${basename}_current_version.tar
2189	if [[ ! -f $make_depository ]]
2190	then
2191	printf "\n"
2192	printf "\n *** WARNING: make depository \"$make_depository\" not found"
2193	printf "\n \"make\" will fail, if the Makefile or other source files are missing\n"
2194	else
2195	cp $make_depository $TEMPDIR_COMPILE
2196	cd $TEMPDIR_COMPILE
2197	tar -xf $make_depository > /dev/null 2>&1
2198	cd - > /dev/null
2199	fi
2200
2201	cp SOURCES_FOR_RUN_$fname/* $TEMPDIR_COMPILE
2202
2203	# FALLS USER-INTERFACE VORHANDEN UND AUF DATEI MIT ANDEREM NAMEN
2204	# ALS user_interface.f90 LIEGT, DIESEN GEAENDERTEN NAMEN INS
2205	# MAKEFILE EINTRAGEN
2206	cd $TEMPDIR_COMPILE
2207	interface_file=`grep -l "END SUBROUTINE user_parin" $source_list`
2208	if [[ "$interface_file" != "" ]]
2209	then
2210	interface_file=`echo $interface_file \| cut -d"." -f1`
2211	mv Makefile Makefile_old
2212	sed "s/user_interface/$interface_file/g" Makefile_old > Makefile
2213	fi
2214	cd - > /dev/null
2215	fi
2216	else
2217	cp $executable ${TEMPDIR}/a.out
2218	fi
2219
2220
2221	# WECHSEL IN TEMPORAEREN KATALOG
2222	cd $TEMPDIR
2223	printf "\n *** changed to temporary directory: $TEMPDIR"
2224
2225
2226	# OUTPUT-DATEI-VERBINDUNGEN AUF TEMPORAERER DATEI ABLEGEN
2227	# DIESE DATEI KANN VON SPAETER AUFZURUFENDEN BENUTZERPROZEDUREN GELESEN
2228	# WERDEN, UM ZU LOKALEN DATEINAMEN GEHOERENDE PERMANENTE NAMEN ZU
2229	# ERMITTELN
2230	(( i = 0 ))
2231	while (( i < iout ))
2232	do
2233	(( i = i + 1 ))
2234	if [[ "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = tra \|\| "${actionout[$i]}" = trpe ]]
2235	then
2236	printf "${localout[$i]} ${actionout[$i]}\n${pathout[$i]}\n${localhost}_${fname}${endout[$i]}\n" >> OUTPUT_FILE_CONNECTIONS
2237	else
2238	printf "${localout[$i]} ${actionout[$i]}\n${pathout[$i]}\n${frelout[$i]}\n" >> OUTPUT_FILE_CONNECTIONS
2239	fi
2240	done
2241
2242
2243	# EVTL. UEBERSETZUNGSAKTIONEN STARTEN
2244	if [[ $do_compile = true ]]
2245	then
2246
2247
2248	# COMPILING WITH MAKE (ON NEC COMPILER IS CALLED ON HOST CROSS)
2249	if [[ "$use_makefile" = true ]]
2250	then
2251	printf "\n\n\n *** compilation starts \n$striche\n"
2252	printf " *** compilation with make using following options:\n"
2253	printf " compilername: $compiler_name\n"
2254	printf " options: $FOPTS\n"
2255	printf " preprocessor-directives: $C_PPOPTS \n"
2256	printf " linker-options: $LOPTS \n"
2257	printf " source code files: $source_list \n"
2258
2259	if [[ $localhost = nech ]]
2260	then
2261	ssh 136.172.44.192 -l $usern ". /SX/opt/etc/initsx.sh; cd \$HOME/work/${usern}.$kennung; sxmake -f Makefile PROG=a.out F90=$compiler_name COPT=\"$C_PPOPTS\" F90FLAGS=\"$FOPTS\" LDFLAGS=\"$LOPTS\" "
2262	cp $TEMPDIR_COMPILE/a.out .
2263	[[ $? != 0 ]] && compile_error=true
2264	rm -rf $TEMPDIR_COMPILE
2265	else
2266	make -f Makefile PROG=a.out F90=$compiler_name COPT="$C_PPOPTS" F90FLAGS="$FOPTS" LDFLAGS="$LOPTS"
2267	fi
2268
2269	# UEBERSETZUNG "VON HAND" (OHNE MAKE)
2270	else
2271
2272
2273	# UEBERSETZUNG DER QUELLTEXT-DATEIEN UND DES HAUPTPROGRAMMS
2274	# $CPPOPTS FUER CPP-PRAEPROZESSOR WURDEN OBEN BESTIMMT
2275	printf "\n\n\n *** compilation starts \n$striche\n"
2276
2277
2278	# VORWEG EVTL. UEBERSETZUNG VON PROGRAMMTEILEN MIT SPEZIELLEN
2279	# COMPILERN UND/ODER COMPILEROPTIONEN. DIESE WERDEN BEI DER SPAETEREN
2280	# EIGENTLICHEN UEBERSETZUNG ALS OBJECT-FILES EINGEBUNDEN
2281	new_source_list=""
2282	for filename in $source_list
2283	do
2284
2285	basename=`print $filename \| cut -f1 -d"."`
2286
2287	# EVTL. SPEZIELLEN COMPILER FUER UP BESTIMMEN
2288	comp_var=$(eval echo \$comp_$basename) # \$ liefert evtl. fuer source alternativ vereinbarten Compiler
2289	comp_opt_var=$(eval echo \$$basename) # \$$ liefert evtl. fuer source vereinbarte Compiler-Environment-Variable
2290
2291	if [[ "$comp_var" = "" && "$comp_opt_var" = "" ]]
2292	then
2293	new_source_list="$new_source_list "$filename
2294	else
2295
2296	if [[ "$comp_var" = "" ]]
2297	then
2298	SPECIAL_COMPILER=$compiler_name
2299	else
2300	SPECIAL_COMPILER=$comp_var
2301	fi
2302
2303	if [[ "$comp_opt_var" = "" ]]
2304	then
2305	SPECIAL_FOPTS=$FOPTS
2306	else
2307	SPECIAL_FOPTS="$parallel_options $(eval echo \$$comp_opt_var)"
2308	fi
2309
2310	printf " *** compiling of $filename with special compiler call: $SPECIAL_COMPILER $CPPOPTS -c $SPECIAL_FOPTS \n"
2311	$SPECIAL_COMPILER $C_PPOPTS -c $SPECIAL_FOPTS $MODULE_OPTIONS $filename
2312	if [[ $? != 0 ]]
2313	then
2314	printf "\n +++ compiling error occured"
2315	locat=compile
2316	exit
2317	fi
2318	new_source_list="$new_source_list "${basename}.o
2319	fi
2320	done
2321	source_list="$new_source_list"
2322
2323
2324	# EIGENTLICHE UEBERSETZUNG MIT DEN NORMALEN OPTIONEN
2325	printf " *** compilation with standard options: $compiler_name $FOPTS $MODULE_OPTIONS \n"
2326	printf " preprocessor-directives: $C_PPOPTS \n"
2327	printf " linker-options: $LOPTS \n"
2328	printf " source code files: $source_list \n"
2329
2330	$compiler_name $C_PPOPTS $FOPTS $MODULE_OPTIONS $LOPTS $source_list
2331
2332	fi
2333	if [[ $? != 0 \|\| "$compile_error" = true \|\| "$module_compile_error" = true ]]
2334	then
2335	printf "\n +++ error occured while compiling or linking"
2336	locat=compile
2337	exit
2338	else
2339	printf "$striche\n *** compilation finished \n"
2340	fi
2341	fi
2342
2343
2344	# FALLS NUR TESTWEISE KOMPILIERT WERDEN SOLLTE, IST MRUN JETZT FERTIG
2345	if [[ $local_compile = true ]]
2346	then
2347	cd $HOME
2348	rm -rf $TEMPDIR
2349	locat=local_compile; exit
2350	fi
2351
2352
2353	# BEREITSTELLEN DER INPUT-DATEIEN
2354	# SCHLEIFE UEBER ALLE VOM BENUTZER ANGEGEBENEN DATEIEN
2355	(( i = 0 ))
2356	while (( i < iin ))
2357	do
2358	(( i = i + 1 ))
2359	if (( i == 1 ))
2360	then
2361	printf "\n\n *** providing INPUT-files:\n$striche"
2362	fi
2363
2364
2365	# OPTIONALE DATEIEN BEI NICHTVORHANDENSEIN UEBERGEHEN
2366	if [[ "${transin[$i]}" = unavailable ]]
2367	then
2368	if [[ "${extin[$i]}" = "" \|\| "${extin[$i]}" = " " ]]
2369	then
2370	printf "\n +++ WARNING: input file \"${pathin[$i]}/${afname}${endin[$i]}\" "
2371	printf "\n is not available!"
2372	else
2373	printf "\n +++ WARNING: input file \"${pathin[$i]}/${afname}${endin[$i]}.${extin[$i]}\" "
2374	printf "\n is not available!"
2375	fi
2376	continue
2377	fi
2378
2379	# PRUEFEN, OB EINZELDATEI ODER DATEI PRO PROZESSOR
2380	files_for_pes=false; datentyp=file
2381	if [[ "${actionin[$i]}" = pe && -n $numprocs ]]
2382	then
2383	files_for_pes=true; datentyp=directory
2384	actionin[$i]=""
2385	elif [[ "${actionin[$i]}" = pe && ! -n $numprocs ]]
2386	then
2387	actionin[$i]=""
2388	elif [[ "${actionin[$i]}" = arpe && -n $numprocs ]]
2389	then
2390	files_for_pes=true; datentyp=directory
2391	actionin[$i]="ar"
2392	elif [[ "${actionin[$i]}" = arpe && ! -n $numprocs ]]
2393	then
2394	actionin[$i]="ar"
2395	elif [[ "${actionin[$i]}" = flpe && -n $numprocs ]]
2396	then
2397	files_for_pes=true; datentyp=directory
2398	actionin[$i]="fl"
2399	elif [[ "${actionin[$i]}" = flpe && ! -n $numprocs ]]
2400	then
2401	actionin[$i]="fl"
2402	fi
2403
2404	if [[ $files_for_pes = true ]]
2405	then
2406	printf "\n >>> INPUT: ${absnamein[$i]}/.... to ${localin[$i]}"
2407	else
2408	printf "\n >>> INPUT: ${absnamein[$i]} to ${localin[$i]}"
2409	fi
2410
2411	# INPUT-DATEI FUER EINEN FORTSETZUNGSLAUF. ES WIRD GEPRUEFT,
2412	# OB DIESE DATEI NOCH AUF DEM TEMPORAEREN DATENKATALOG VORHANDEN
2413	# IST. FALLS NICHT, WIRD VERSUCHT, SIE ANSCHLIESSEND VOM ARCHIV-
2414	# SERVER ZU HOLEN
2415	if [[ "${actionin[$i]}" = fl ]]
2416	then
2417	printf "\n $datentyp will be fetched from temporary directory \"${tmp_data_catalog}\" !"
2418	if [[ $files_for_pes = false ]]
2419	then
2420	if [[ -f "$tmp_data_catalog/${frelin[$i]}" ]]
2421	then
2422	ln $tmp_data_catalog/${frelin[$i]} ${localin[$i]}
2423	got_tmp[$i]=true
2424	elif [[ -f "$WORK/${frelin[$i]}" && $ignore_archive_error = true ]]
2425	then
2426	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" !"
2427	printf "\n *** trying to use backup copy in \"$WORK\" "
2428	cp $WORK/${frelin[$i]} ${localin[$i]}
2429	else
2430	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" "
2431	printf "\n or \"$tmp_data_catalog\" does not exist!"
2432	printf "\n *** trying to get copy from archive"
2433	actionin[$i]=ar
2434	fi
2435	else
2436	if [[ -d "$tmp_data_catalog/${frelin[$i]}" ]]
2437	then
2438	mkdir ${localin[$i]}
2439	ln $tmp_data_catalog/${frelin[$i]}/* ${localin[$i]}
2440	got_tmp[$i]=true
2441	elif [[ -d "$WORK/${frelin[$i]}" && $ignore_archive_error = true ]]
2442	then
2443	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" !"
2444	printf "\n *** trying to use backup copy in \"$WORK\" "
2445	cp -r $WORK/${frelin[$i]} ${localin[$i]}
2446	else
2447	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" "
2448	printf "\n or \"$tmp_data_catalog\" does not exist!"
2449	printf "\n *** trying to get copy from archive"
2450	actionin[$i]=ar
2451	fi
2452	fi
2453	fi
2454
2455
2456	# DATEI LIEGT AUF ARCHIV-SERVER
2457	if [[ "${actionin[$i]}" = ar ]]
2458	then
2459
2460	if [[ $files_for_pes = false ]]
2461	then
2462	printf "\n file will be restored from archive-system ($archive_system)!"
2463	else
2464	printf "\n directory will be restored from archive-system ($archive_system)!"
2465	fi
2466
2467	file_restored=false
2468
2469	if [[ $archive_system = asterix ]]
2470	then
2471	do_stagein=true
2472	(( stagein_anz = 0 ))
2473	while [[ $do_stagein = true ]]
2474	do
2475	if [[ $files_for_pes = false ]]
2476	then
2477	stagein -O ${frelin[$i]} > STAGEIN_OUTPUT
2478	else
2479	stagein -t -O ${frelin[$i]} > STAGEIN_OUTPUT
2480	fi
2481	cat STAGEIN_OUTPUT
2482	if [[ $(grep -c "st.msg:i24" STAGEIN_OUTPUT) != 0 ]]
2483	then
2484	file_restored=true
2485	do_stagein=false
2486	else
2487	(( stagein_anz = stagein_anz + 1 ))
2488	if (( stagein_anz == 10 ))
2489	then
2490	printf "\n +++ stagein stoped after 10 tries"
2491	locat=stage
2492	exit
2493	fi
2494	printf "\n +++ restoring from archive failed, trying again:"
2495	sleep 900
2496	fi
2497	done
2498	elif [[ $archive_system = DMF ]]
2499	then
2500	if [[ $files_for_pes = false ]]
2501	then
2502	printf "\n +++ restoring of single files impossible with $archive_system !\n"
2503	locat=DMF
2504	exit
2505	else
2506	find $ARCHIVE/${frelin[$i]} -type m -print \| dmget
2507	cp -r $ARCHIVE/${frelin[$i]} $PWD
2508	file_restored=true
2509	fi
2510	elif [[ $archive_system = tivoli ]]
2511	then
2512	if [[ $files_for_pes = false ]]
2513	then
2514	if [[ $localhost = ibmh ]]
2515	then
2516	ssh $usern@hdata.hlrn.de "cp $PERM/${frelin[$i]} $PWD"
2517	else
2518	ssh $usern@bdata.hlrn.de "cp $PERM/${frelin[$i]} $PWD"
2519	fi
2520	else
2521	(( inode = 0 ))
2522	while (( inode < nodes ))
2523	do
2524	if [[ $localhost = ibmh ]]
2525	then
2526	ssh $usern@hdata.hlrn.de "cd $PWD; tar xf $PERM/${frelin[$i]}/${frelin[$i]}.node_$inode.tar"
2527	else
2528	ssh $usern@bdata.hlrn.de "cd $PWD; tar xf $PERM/${frelin[$i]}/${frelin[$i]}.node_$inode.tar"
2529	fi
2530	(( inode = inode + 1 ))
2531	done
2532	fi
2533	file_restored=true
2534	elif [[ $archive_system = ut ]]
2535	then
2536	if [[ $files_for_pes = false ]]
2537	then
2538	cp $UT/${frelin[$i]} .
2539	else
2540	(( inode = 0 ))
2541	while (( inode < nodes ))
2542	do
2543	tar xf $UT/${frelin[$i]}/${frelin[$i]}.node_$inode.tar
2544	(( inode = inode + 1 ))
2545	done
2546	fi
2547	file_restored=true
2548	else
2549	printf "\n +++ archive_system=\"$archive_system\" restore impossible!"
2550	locat=rearchive
2551	exit
2552	fi
2553
2554	if [[ $file_restored = true ]]
2555	then
2556
2557	# DATEI AUCH AUF TEMPORAERES DATENVERZEICHNIS LEGEN, DAMIT
2558	# SIE BEI WEITEREN ZUGRIFFEN NOCH VORHANDEN IST
2559	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog; chmod g+rx $tmp_data_catalog
2560	if [[ $files_for_pes = false ]]
2561	then
2562	ln -f ${frelin[$i]} $tmp_data_catalog/${frelin[$i]}
2563	else
2564	mkdir $tmp_data_catalog/${frelin[$i]}
2565	ln -f ${frelin[$i]}/* $tmp_data_catalog/${frelin[$i]}
2566	fi
2567	got_tmp[$i]=true
2568
2569	# DATEI UNTER LOKALEM NAMEN ZUR VERFUEGUNG STELLEN
2570	mv ${frelin[$i]} ${localin[$i]}
2571
2572	fi
2573	fi
2574
2575
2576	# DATEI LIEGT IM VOM BENUTZER ANGEGEBENEN VERZEICHNIS
2577	if [[ "${actionin[$i]}" = "" \|\| "${actionin[$i]}" = "di" \|\| "${actionin[$i]}" = "npe" ]]
2578	then
2579
2580	if [[ "${actionin[$i]}" = "npe" && -n $numprocs ]]
2581	then
2582
2583	# DATEI WIRD FUER DIE PROZESSOREN EINES PARALLERECHNERS BEREITGESTELLT
2584	printf "\n file will be provided for $numprocs processors"
2585	mkdir ${localin[$i]}
2586	ival=$numprocs
2587	(( ii = 0 ))
2588	while (( ii <= ival-1 ))
2589	do
2590	if (( ii < 10 ))
2591	then
2592	cp ${absnamein[$i]} ${localin[$i]}/_000$ii
2593	elif (( ii < 100 ))
2594	then
2595	cp ${absnamein[$i]} ${localin[$i]}/_00$ii
2596	elif (( ii < 1000 ))
2597	then
2598	cp ${absnamein[$i]} ${localin[$i]}/_0$ii
2599	else
2600	cp ${absnamein[$i]} ${localin[$i]}/_$ii
2601	fi
2602	(( ii = ii + 1 ))
2603	done
2604
2605	else
2606
2607	if [[ $files_for_pes = true ]]
2608	then
2609
2610	# DIE DEN PROZESSOREN EINES PARALLELRECHNERS ZUGEHOERIGEN
2611	# DATEIEN WERDEN BEREITGESTELLT, INDEM ZUERST DER GESAMTE
2612	# KATALOGINHALT KOPIERT UND DANN DIE EINZELNEN DATEIEN
2613	# PER MOVE UMBENANNT WERDEN
2614	printf "\n providing $numprocs files for the respective processors"
2615	mkdir ${localin[$i]}
2616	cp -r ${absnamein[$i]}/* ${localin[$i]}
2617
2618	else
2619	# BEREITSTELLUNG AUF EINPROZESSORRECHNERN
2620	cp ${absnamein[$i]} ${localin[$i]}
2621	fi
2622	fi
2623	fi
2624
2625	done
2626	if (( i != 0 ))
2627	then
2628	printf "\n$striche\n *** all INPUT-files provided \n"
2629	fi
2630
2631
2632	# NAMELIST-DATEI MIT WERTEN VON ENVIRONMENT-VARIABLEN ERZEUGEN (ZU
2633	# LESEN VON PALM)
2634	cat > ENVPAR << %%END%%
2635	&envpar run_identifier = '$fname', host = '$localhost',
2636	write_binary = '$write_binary', tasks_per_node = $tasks_per_node,
2637	maximum_cpu_time_allowed = ${cpumax}. /
2638
2639	%%END%%
2640
2641
2642	# EVENTUELLE INPUT-KOMMANDOS ABARBEITEN
2643	(( i = 0 ))
2644	while (( i < iic ))
2645	do
2646	(( i = i + 1 ))
2647	if (( i == 1 ))
2648	then
2649	printf "\n\n *** execution of INPUT-commands:\n$striche"
2650	fi
2651	printf "\n >>> ${in_command[$i]}"
2652	eval ${in_command[$i]}
2653	if (( i == iic ))
2654	then
2655	printf "\n$striche\n"
2656	fi
2657	done
2658
2659
2660	# VERBLEIBENDE CPU-ZEIT BERECHNEN
2661	cpurest=${cpumax}.
2662
2663
2664	# PROGRAMMSTART
2665	printf "\n\n *** execution starts in directory\n \"`pwd`\"\n$striche\n"
2666	PATH=$PATH:$TEMPDIR
2667
2668	if [[ "$cond1" = debug \|\| "$cond2" = debug ]]
2669	then
2670	if [[ "$ENVIRONMENT" = BATCH ]]
2671	then
2672	printf "\n +++ debug is allowed in interactive mode only"
2673	locat=debug
2674	exit
2675	fi
2676	if [[ $localhost = decalpha ]]
2677	then
2678	dxladebug a.out
2679	elif [[ $localhost = ibmb \|\| $localhost = ibmh ]]
2680	then
2681
2682	# SETUP THE IBM MPI ENVIRONMENT
2683	export MP_SHARED_MEMORY=yes
2684	export AIXTHREADS_SCOPE=S
2685	export OMP_NUM_THREADS=$threads_per_task
2686	export AUTHSTATE=files
2687	export XLFRTEOPTS="nlwidth=132:err_recovery=no" # RECORD-LENGTH OF NAMELIST-OUTPUT
2688
2689	# FOLLOWING OPTIONS ARE MANDATORY FOR TOTALVIEW
2690	export MP_ADAPTER_USE=shared
2691	export MP_CPU_USE=multiple
2692	export MP_TIMEOUT=1200
2693
2694	unset MP_TASK_AFFINITY
2695
2696	# SO FAR, TOTALVIEW NEEDS HOSTFILE MECHANISM FOR EXECUTION
2697	#(( ii = 1 ))
2698	#while (( ii <= $numprocs ))
2699	#do
2700	# echo $localhost_realname >> hostfile
2701	# (( ii = ii + 1 ))
2702	#done
2703	#export MP_HOSTFILE=hostfile
2704
2705	if [[ "$LOADLBATCH" = yes ]]
2706	then
2707	totalview poe a.out $ROPTS
2708	else
2709	echo totalview poe -a a.out -procs $numprocs -rmpool 0 -nodes 1 $ROPTS
2710	export TVDSVRLAUNCHCMD=ssh
2711	totalview poe -a a.out -procs $numprocs -rmpool 0 -nodes 1 $ROPTS
2712	fi
2713	else
2714	printf "\n +++ no debug available on \"$localhost\" "
2715	printf "\n or not implemented in mrun so far"
2716	locat=debug
2717	exit
2718	fi
2719	else
2720	if [[ -n $numprocs ]]
2721	then
2722
2723	# RUNNING THE PROGRAM ON PARALLEL MACHINES
2724	if [[ $(echo $host \| cut -c1-3) = ibm ]]
2725	then
2726	# SETUP THE IBM MPI ENVIRONMENT
2727	export MP_SHARED_MEMORY=yes
2728	export AIXTHREAD_SCOPE=S
2729	export OMP_NUM_THREADS=$threads_per_task
2730	export XLSMPOPTS="spins=0:yields=0:stack=20000000"
2731	export AUTHSTATE=files
2732	export XLFRTEOPTS="nlwidth=132:err_recovery=no" # RECORD-LENGTH OF NAMELIST-OUTPUT
2733	# export MP_PRINTENV=yes
2734
2735	# TUNING-VARIABLEN ZUR VERBESSERUNG DER KOMMUNIKATION
2736	# ZEIGEN ABER DERZEIT (SEP 04, FEDERATION) KAUM WIRKUNG
2737	export MP_WAIT_MODE=poll
2738	[[ $node_usage = not_shared ]] && export MP_SINGLE_THREAD=yes
2739	# export MP_EAGER_LIMIT=65535
2740
2741	# # TESTWEISE FUER TURBOMPI (JAN 05)
2742	# export MPJ_MTAB=128
2743	# export MPJ_ALLTOALL=1
2744	# export MPJ_ALLTOALLV=1
2745
2746	if [[ "$LOADLBATCH" = yes ]]
2747	then
2748	printf "\n--- Control: OMP_NUM_THREADS = \"$OMP_NUM_THREADS\" \n"
2749	if [[ "$cond1" = hpmcount \|\| "$cond2" = hpmcount ]]
2750	then
2751	/opt/optibm/HPM_2_4_1/bin/hpmcount a.out $ROPTS > aout_output 2>&1
2752	else
2753	poe ./a.out $ROPTS > aout_output 2>&1
2754	fi
2755	else
2756	if [[ $localhost = ibmb \|\| $localhost = ibmh \|\| $localhost = ibms ]]
2757	then
2758	poe a.out -procs $numprocs -nodes 1 -rmpool 0 $ROPTS > aout_output 2>&1
2759	elif [[ $localhost = ibmy ]]
2760	then
2761	if [[ -f $hostfile ]]
2762	then
2763	cp $hostfile hostfile
2764	else
2765	(( ii = 1 ))
2766	while (( ii <= $numprocs ))
2767	do
2768	echo $localhost_realname >> hostfile
2769	(( ii = ii + 1 ))
2770	done
2771	fi
2772	export MP_HOSTFILE=hostfile
2773	./a.out -procs $tasks_per_node $ROPTS > aout_output 2>&1
2774	else
2775	if [[ "$host_file" = "" ]]
2776	then
2777	printf "\n +++ no hostfile given in configuration file"
2778	locat=config_file
2779	exit
2780	else
2781	eval host_file=$host_file
2782	fi
2783	export MP_HOSTFILE=$host_file
2784	poe a.out -procs $numprocs -tasks_per_node $numprocs $ROPTS > aout_output 2>&1
2785	fi
2786	fi
2787	elif [[ $host = nech \|\| $host = neck ]]
2788	then
2789	(( ii = nodes ))
2790	if [[ $ii = 1 ]]
2791	then
2792	export F_ERRCNT=0 # acceptable number of errors before program is stopped
2793	export MPIPROGINF=YES
2794	echo "*** execution on single node with mpirun"
2795	mpirun -np $numprocs ./a.out $ROPTS > aout_output 2>&1
2796	else
2797	(( i = 0 ))
2798	while (( i < ii ))
2799	do
2800	echo "-h $i -p $tasks_per_node -e ./mpi_exec_shell" >> multinode_config
2801	(( i = i + 1 ))
2802	done
2803
2804	echo "#!/bin/sh" > mpi_exec_shell
2805	echo " " >> mpi_exec_shell
2806	echo "set -u" >> mpi_exec_shell
2807	echo "F_ERRCNT=0" >> mpi_exec_shell
2808	echo "MPIPROGINV=YES" >> mpi_exec_shell
2809	echo "OMP_NUM_THREADS=$threads_per_task" >> mpi_exec_shell
2810	echo "cpurest=$cpurest" >> mpi_exec_shell
2811	echo "fname=$fname" >> mpi_exec_shell
2812	echo "localhost=$localhost" >> mpi_exec_shell
2813	echo "return_addres=$return_addres" >> mpi_exec_shell
2814	echo "return_username=$return_username" >> mpi_exec_shell
2815	echo "tasks_per_node=$tasks_per_node" >> mpi_exec_shell
2816	echo "write_binary=$write_binary" >> mpi_exec_shell
2817	echo "use_seperate_pe_for_dvrp_output=$use_seperate_pe_for_dvrp_output" >> mpi_exec_shell
2818	echo " " >> mpi_exec_shell
2819	echo "export F_ERRCNT" >> mpi_exec_shell
2820	echo "export MPIPROGINV" >> mpi_exec_shell
2821	echo "export OMP_NUM_THREADS" >> mpi_exec_shell
2822	echo "export cpurest" >> mpi_exec_shell
2823	echo "export fname" >> mpi_exec_shell
2824	echo "export localhost" >> mpi_exec_shell
2825	echo "export return_addres" >> mpi_exec_shell
2826	echo "export return_username" >> mpi_exec_shell
2827	echo "export tasks_per_node" >> mpi_exec_shell
2828	echo "export write_binary" >> mpi_exec_shell
2829	echo "export use_seperate_pe_for_dvrp_output" >> mpi_exec_shell
2830	echo " " >> mpi_exec_shell
2831	echo "exec ./a.out > aout_output 2>&1" >> mpi_exec_shell
2832
2833	chmod u+x mpi_exec_shell
2834	export MPIPROGINF=YES
2835	mpirun -f multinode_config &
2836	wait
2837
2838	fi
2839	elif [[ $host = lcmuk ]]
2840	then
2841
2842	# COPY HOSTFILE FROM SOURCE DIRECTORY OR CREATE IT, IF IT
2843	# DOES NOT EXIST
2844	if [[ -f $hostfile ]]
2845	then
2846	cp $hostfile hostfile
2847	else
2848	(( ii = 1 ))
2849	while (( ii <= $numprocs / $threads_per_task ))
2850	do
2851	echo $localhost_realname >> hostfile
2852	(( ii = ii + 1 ))
2853	done
2854	fi
2855	(( ii = $numprocs / $threads_per_task ))
2856	eval zeile=\"`head -n $ii hostfile`\"
2857	printf "\n *** running on: $zeile"
2858	export OMP_NUM_THREADS=$threads_per_task
2859	if [[ $threads_per_task != 1 ]]
2860	then
2861	printf "\n threads per task: $threads_per_task"
2862	fi
2863	printf "\n\n"
2864	if [[ $scirocco = true ]]
2865	then
2866	mpiexec -machinefile hostfile -n $ii a.out $ROPTS > aout_output 2>&1
2867	else
2868	mpirun -machinefile hostfile -np $ii a.out $ROPTS > aout_output 2>&1
2869	fi
2870	elif [[ $host = decalpha ]]
2871	then
2872	dmpirun -np $numprocs a.out $ROPTS > aout_output 2>&1
2873	elif [[ $host = lctit ]]
2874	then
2875	export runfile=runfile.$kennung
2876
2877	echo "cd $PWD" > $runfile
2878	echo "export OMP_NUM_THREADS=$OMP_NUM_THREADS" >> $runfile
2879	echo "export cpurest=$cpurest" >> $runfile
2880	echo "export fname=$fname" >> $runfile
2881	echo "export localhost=$localhost" >> $runfile
2882	echo "export return_addres=$return_addres" >> $runfile
2883	echo "export return_username=$return_username" >> $runfile
2884	echo "export tasks_per_node=$tasks_per_node" >> $runfile
2885	echo "export write_binary=$write_binary" >> $runfile
2886	echo "export use_seperate_pe_for_dvrp_output=$use_seperate_pe_for_dvrp_output" >> $runfile
2887	echo "./a.out" >> $runfile
2888	chmod u+x $runfile
2889
2890	if [[ "$QUEUE" = interactive ]]
2891	then
2892	mpirun -np $numprocs $runfile $ROPTS > aout_output 2>&1
2893	else
2894	n1ge -fore -mpi $numprocs -q $queue $runfile $ROPTS > aout_output 2>&1
2895	fi
2896
2897	rm $runfile
2898	else
2899	mpprun -n $numprocs a.out $ROPTS > aout_output 2>&1
2900	fi
2901	[[ $? != 0 ]] && execution_error=true
2902
2903
2904	# PERFORMANCE-AUSWERTUNG MIT APPRENTICE
2905	if [[ "$cond1" = apprentice \|\| "$cond2" = apprentice ]]
2906	then
2907	apprentice
2908	fi
2909	else
2910	a.out $ROPTS > aout_output 2>&1
2911	fi
2912	fi
2913	if [[ $? != 0 \|\| $execution_error = true ]]
2914	then
2915
2916	# ABBRUCH BEI LAUFZEITFEHLER
2917	[[ ! ( "$cond1" = debug \|\| "$cond2" = debug ) ]] && cat aout_output
2918	printf "\n +++ runtime error occured"
2919	locat=execution
2920	exit
2921	else
2922	[[ ! ( "$cond1" = debug \|\| "$cond2" = debug ) ]] && cat aout_output
2923	printf "\n$striche\n *** execution finished \n"
2924	fi
2925
2926
2927
2928	# EVENTUELLE OUTPUT-KOMMANDOS ABARBEITEN
2929	(( i = 0 ))
2930	while (( i < ioc ))
2931	do
2932	(( i = i + 1 ))
2933	if (( i == 1 ))
2934	then
2935	printf "\n\n *** execution of OUTPUT-commands:\n$striche"
2936	fi
2937	printf "\n >>> ${out_command[$i]}"
2938	eval ${out_command[$i]}
2939	if (( i == ioc ))
2940	then
2941	printf "\n$striche\n"
2942	fi
2943	done
2944
2945
2946	# EVTL. INHALT DES AKTUELLEN VERZEICHNISSES AUSGEBEN
2947	if [[ $do_trace = true ]]
2948	then
2949	printf "\n\n"
2950	ls -al
2951	fi
2952
2953
2954
2955	# OUTPUT-DATEIEN AN IHRE ZIELORTE KOPIEREN
2956	(( i = 0 ))
2957	while (( i < iout ))
2958	do
2959	(( i = i + 1 ))
2960	if (( i == 1 ))
2961	then
2962	printf "\n\n *** saving OUTPUT-files:\n$striche"
2963	fi
2964
2965	# PRUEFEN, OB EINZELDATEI ODER DATEI PRO PROZESSOR
2966	files_for_pes=false; filetyp=file
2967	if [[ "${actionout[$i]}" = pe && -n $numprocs ]]
2968	then
2969	files_for_pes=true; filetyp=directory
2970	actionout[$i]=""
2971	elif [[ "${actionout[$i]}" = pe && ! -n $numprocs ]]
2972	then
2973	actionout[$i]=""
2974	elif [[ "${actionout[$i]}" = arpe && -n $numprocs ]]
2975	then
2976	files_for_pes=true; filetyp=directory
2977	actionout[$i]="ar"
2978	elif [[ "${actionout[$i]}" = arpe && ! -n $numprocs ]]
2979	then
2980	actionout[$i]="ar"
2981	elif [[ "${actionout[$i]}" = flpe && -n $numprocs ]]
2982	then
2983	files_for_pes=true; filetyp=directory
2984	actionout[$i]="fl"
2985	elif [[ "${actionout[$i]}" = flpe && ! -n $numprocs ]]
2986	then
2987	actionout[$i]="fl"
2988	elif [[ "${actionout[$i]}" = trpe && -n $numprocs ]]
2989	then
2990	files_for_pes=true; filetyp=directory
2991	actionout[$i]="tr"
2992	elif [[ "${actionout[$i]}" = trpe && ! -n $numprocs ]]
2993	then
2994	actionout[$i]="tr"
2995	fi
2996
2997	if [[ ! -f ${localout[$i]} && $files_for_pes = false ]]
2998	then
2999	printf "\n +++ temporary OUTPUT-file ${localout[$i]} does not exist\n"
3000	elif [[ ! -f ${localout[$i]}/_0000 && $files_for_pes = true ]]
3001	then
3002	printf "\n +++ temporary OUTPUT-file ${localout[$i]}/.... does not exist\n"
3003	else
3004
3005
3006	# KOPIEREN PER FTP/SCP (IMMER IM BINAERMODUS, -M: FALLS ZIELKATALOG
3007	# NICHT VORHANDEN, WIRD VERSUCHT, IHN ANZULEGEN), ABER NUR BEI
3008	# REMOTE-RECHNUNGEN
3009	if [[ "${actionout[$i]}" = tr ]]
3010	then
3011	if [[ $localhost != $fromhost ]]
3012	then
3013	if [[ $files_for_pes = false ]]
3014	then
3015	cps=""
3016	cst=""
3017	else
3018	cps=-c
3019	cst="/"
3020	fi
3021	if [[ $localhost = ibmh \|\| $localhost = ibmb \|\| $localhost = nech ]]
3022	then
3023
3024	# TRANSFER IN EIGENSTAENDIGEM JOB
3025	# ZUERST KOPIE DER DATEI INS TEMPORAERE DATENVERZEICHNIS
3026	[[ ! -d $tmp_data_catalog/TRANSFER ]] && mkdir -p $tmp_data_catalog/TRANSFER
3027	file_to_transfer=${fname}_${localout[$i]}_to_transfer_$kennung
3028	if [[ $files_for_pes = false ]]
3029	then
3030	ln -f ${localout[$i]} $tmp_data_catalog/TRANSFER/$file_to_transfer
3031	else
3032	mkdir $tmp_data_catalog/TRANSFER/$file_to_transfer
3033	ln ${localout[$i]}/* $tmp_data_catalog/TRANSFER/$file_to_transfer
3034	fi
3035
3036	echo "set -x" > transfer_${localout[$i]}
3037	echo "cd $tmp_data_catalog/TRANSFER" >> transfer_${localout[$i]}
3038	if [[ $filetransfer_protocol = ftp ]]
3039	then
3040	if [[ $files_for_pes = true ]]
3041	then
3042	printf "\n +++ WARNING: no transfer of catalogs via ftpcopy\n"
3043	fi
3044	printf "\n >>> OUTPUT: ${localout[$i]} by FTP in seperate job to"
3045	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}"
3046	printf "\n or higher cycle\n"
3047	echo "ftpcopy -b -m $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
3048	else
3049	printf "\n >>> OUTPUT: ${localout[$i]}$cst by SCP in seperate job to"
3050	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}$cst"
3051	printf "\n or higher cycle\n"
3052	echo "batch_scp $cps -b -m -u $return_username $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
3053	fi
3054	echo "[[ \$? = 0 ]] && rm $file_to_transfer" >> transfer_${localout[$i]}
3055
3056	if [[ $localhost = nech ]]
3057	then
3058	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 900 -f $filetransfer_protocol transfer_${localout[$i]}
3059	else
3060	if [[ "$LOGNAME" = b323013 ]]
3061	then
3062	subjob -v -q c1 -X 0 -m 1000 -t 900 -f $filetransfer_protocol transfer_${localout[$i]}
3063	else
3064	subjob -d -v -q c1 -X 0 -m 1000 -t 900 -f $filetransfer_protocol transfer_${localout[$i]}
3065	fi
3066	fi
3067
3068	else
3069
3070	# TRANSFER INNERHALB DIESES JOBS
3071	transfer_failed=false
3072	if [[ $filetransfer_protocol = ftp ]]
3073	then
3074	if [[ $files_for_pes = true ]]
3075	then
3076	printf "\n +++ WARNING: no transfer of catalogs via ftpcopy\n"
3077	fi
3078	printf "\n >>> OUTPUT: ${localout[$i]} by FTP to"
3079	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}\n"
3080	ftpcopy -b -m $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
3081	[[ $? != 0 ]] && transfer_failed=true
3082	else
3083	printf "\n >>> OUTPUT: ${localout[$i]}$cst by SCP to"
3084	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}$cst\n"
3085	batch_scp $cps -b -m -u $return_username $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
3086	[[ $? != 0 ]] && transfer_failed=true
3087	fi
3088
3089	# BEI FEHLGESCHLAGENEM TRANSFER SICHERUNGSKOPIE AUF
3090	# LOKALER MASCHINE ANLEGEN
3091	if [[ $transfer_failed = true ]]
3092	then
3093	printf " +++ transfer failed. Trying to save a copy on the local host under:\n"
3094	printf " ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung\n"
3095
3096	# ERSTMAL PRUEFEN, OB VERZEICHNIS EXISTIERT. GEGEBENENFALLS
3097	# ANLEGEN.
3098	eval local_catalog=${pathout[$i]}
3099	if [[ ! -d $local_catalog ]]
3100	then
3101	printf " *** local directory does not exist. Trying to create:\n"
3102	printf " $local_catalog \n"
3103	mkdir -p $local_catalog
3104	fi
3105	eval cp ${localout[$i]} ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung
3106	transfer_problems=true
3107	fi
3108	fi
3109	else
3110
3111	# WERTZUWEISUNG, SO DASS WEITER UNTEN NUR KOPIERT WIRD
3112	actionout[$i]=""
3113	fi
3114	fi
3115
3116
3117	# APPEND PER FTP/SCP (IMMER IM BINAERMODUS, -M: FALLS ZIELKATALOG
3118	# NICHT VORHANDEN, WIRD VERSUCHT, IHN ANZULEGEN), ABER NUR BEI
3119	# REMOTE-RECHNUNGEN
3120	if [[ "${actionout[$i]}" = tra ]]
3121	then
3122	if [[ $localhost != $fromhost ]]
3123	then
3124	if [[ $localhost = ibmh \|\| $localhost = ibmb \|\| $localhost = nech ]]
3125	then
3126
3127	# TRANSFER IN EIGENSTAENDIGEM JOB
3128	# ZUERST KOPIE DER DATEI INS TEMPORAERE DATENVERZEICHNIS
3129	[[ ! -d $tmp_data_catalog/TRANSFER ]] && mkdir -p $tmp_data_catalog/TRANSFER
3130	file_to_transfer=${fname}_${localout[$i]}_to_transfer_$kennung
3131	ln -f ${localout[$i]} $tmp_data_catalog/TRANSFER/$file_to_transfer
3132
3133	echo "set -x" > transfer_${localout[$i]}
3134	echo "cd $tmp_data_catalog/TRANSFER" >> transfer_${localout[$i]}
3135	if [[ $filetransfer_protocol = ftp ]]
3136	then
3137	printf "\n >>> OUTPUT: ${localout[$i]} append by FTP in seperate job to"
3138	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}"
3139	printf "\n or higher cycle\n"
3140	echo "ftpcopy -A -b -m $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
3141	else
3142	printf "\n >>> OUTPUT: ${localout[$i]} append by SCP in seperate job to"
3143	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}"
3144	printf "\n or higher cycle\n"
3145	echo "batch_scp -A -b -m -u $return_username $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
3146	fi
3147	echo "[[ \$? = 0 ]] && rm $file_to_transfer" >> transfer_${localout[$i]}
3148
3149	if [[ $localhost = nech ]]
3150	then
3151	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 900 -f $filetransfer_protocol transfer_${localout[$i]}
3152	else
3153	if [[ $LOGNAME = b323013 ]]
3154	then
3155	subjob -v -q c1 -X 0 -m 1000 -t 900 -f $filetransfer_protocol transfer_${localout[$i]}
3156	else
3157	subjob -d -v -q c1 -X 0 -m 1000 -t 900 -f $filetransfer_protocol transfer_${localout[$i]}
3158	fi
3159	fi
3160
3161	else
3162
3163	# TRANSFER INNERHALB DIESES JOBS
3164	transfer_failed=false
3165	if [[ $filetransfer_protocol = ftp ]]
3166	then
3167	printf "\n >>> OUTPUT: ${localout[$i]} append by FTP to"
3168	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}\n"
3169	ftpcopy -A -b -m $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
3170	[[ $? != 0 ]] && transfer_failed=true
3171	else
3172	printf "\n >>> OUTPUT: ${localout[$i]} append by SCP to"
3173	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}\n"
3174	batch_scp -A -b -m -u $return_username $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
3175	[[ $? != 0 ]] && transfer_failed=true
3176	fi
3177
3178	# BEI FEHLGESCHLAGENEM TRANSFER SICHERUNGSKOPIE AUF
3179	# LOKALER MASCHINE ANLEGEN
3180	if [[ $transfer_failed = true ]]
3181	then
3182	printf " +++ transfer failed. Trying to save a copy on the local host under:\n"
3183	printf " ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung\n"
3184
3185	# ERSTMAL PRUEFEN, OB VERZEICHNIS EXISTIERT. GEGEBENENFALLS
3186	# ANLEGEN
3187	eval local_catalog=${pathout[$i]}
3188	if [[ ! -d $local_catalog ]]
3189	then
3190	printf " *** local directory does not exist. Trying to create:\n"
3191	printf " $local_catalog \n"
3192	mkdir -p $local_catalog
3193	fi
3194
3195	eval cp ${localout[$i]} ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung
3196	transfer_problems=true
3197	fi
3198	fi
3199	else
3200
3201	# WERTZUWEISUNG, SO DASS WEITER UNTEN NUR APPEND AUF
3202	# LOKALER MASCHINE DURCHGEFUEHRT WIRD
3203	actionout[$i]=a
3204	fi
3205	fi
3206
3207
3208	# OUTPUT-DATEI FUER EINEN FORTSETZUNGSLAUF. DATEI WIRD PER
3209	# LINK AUF DEN TEMPORAEREN DATENKATALOG GELEGT. OPTION -f WIRD
3210	# VERWENDET, FALLS DORT NOCH EINE DATEI GLEICHEN NAMENS VORHANDEN
3211	# SEIN SOLLTE. ANSCHLIESSEND WIRD SEINE ARCHIVIERUNG ANGESTOSSEN
3212	if [[ "${actionout[$i]}" = fl ]]
3213	then
3214	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
3215	chmod g+rx $tmp_data_catalog
3216	if [[ $files_for_pes = false ]]
3217	then
3218	printf "\n >>> OUTPUT: ${localout[$i]} to"
3219	printf "\n $tmp_data_catalog/${frelout[$i]} (temporary data catalog)\n"
3220	ln -f ${localout[$i]} $tmp_data_catalog/${frelout[$i]}
3221	else
3222	printf "\n >>> OUTPUT: ${localout[$i]}/.... to"
3223	printf "\n $tmp_data_catalog/${frelout[$i]} (temporary data catalog)\n"
3224	mkdir $tmp_data_catalog/${frelout[$i]}
3225	ln -f ${localout[$i]}/* $tmp_data_catalog/${frelout[$i]}
3226	fi
3227
3228
3229	# ARCHIVIERUNGSJOB WIRD ERZEUGT UND ABGESCHICKT
3230	if [[ $store_on_archive_system = true ]]
3231	then
3232
3233	if [[ $archive_system = asterix ]]
3234	then
3235	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3236	if [[ $files_for_pes = false ]]
3237	then
3238	echo "stageout ${frelout[$i]} > STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3239	else
3240	echo "stageout -t ${frelout[$i]} > STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3241	fi
3242	echo "cat STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3243	echo "if [[ \$(grep -c \"st.msg:150\" STAGE_OUTPUT${i}_$kennung) != 0 ]]" >> archive_${frelout[$i]}
3244	echo "then" >> archive_${frelout[$i]}
3245	echo " do_stageout=false" >> archive_${frelout[$i]}
3246	echo "else" >> archive_${frelout[$i]}
3247	echo " echo \" +++ $filetyp ${frelout[$i]} could not be stored on archive-system\" " >> archive_${frelout[$i]}
3248	echo " cat /dev/null > ~/job_queue/ARCHIVE_ERROR_$fname" >> archive_${frelout[$i]}
3249	echo " cat STAGE_OUTPUT${i}_$kennung > ~/job_queue/archive_${frelout[$i]}_error" >> archive_${frelout[$i]}
3250	echo " echo \" *** $filetyp ${frelout[$i]} will be copied to \$WORK as backup\" " >> archive_${frelout[$i]}
3251	if [[ $files_for_pes = false ]]
3252	then
3253	echo " cp ${frelout[$i]} \$WORK" >> archive_${frelout[$i]}
3254	else
3255	echo " cp -r ${frelout[$i]} \$WORK/${frelout[$i]}" >> archive_${frelout[$i]}
3256	fi
3257	echo " echo \" *** $filetyp ${frelout[$i]} saved\" " >> archive_${frelout[$i]}
3258	echo "fi" >> archive_${frelout[$i]}
3259	echo "rm STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3260	elif [[ $archive_system = DMF ]]
3261	then
3262	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3263	if [[ $files_for_pes = false ]]
3264	then
3265	printf "\n +++ archiving of single files impossible with $archive_system !\n"
3266	locat=DMF
3267	exit
3268	else
3269	# FUER RECHNER IN JUELICH. DORT KOENNTEN AUCH
3270	# EINZELNE DATEIEN GESICHERT WERDEN (SPAETER KORR.)
3271	echo "rm -rf \$ARCHIVE/${frelout[$i]}" >> archive_${frelout[$i]}
3272	echo "cp -r ${frelout[$i]} \$ARCHIVE" >> archive_${frelout[$i]}
3273	fi
3274	elif [[ $archive_system = tivoli ]]
3275	then
3276	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3277	if [[ $files_for_pes = false ]]
3278	then
3279	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3280	echo "set -x" >> archive_${frelout[$i]}
3281	echo "rm -rf \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3282	echo "cp ${frelout[$i]} \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3283	else
3284
3285	echo "set -x" >> archive_${frelout[$i]}
3286	echo "rm -rf \$PERM/${frelout[$i]}/*" >> archive_${frelout[$i]}
3287	echo "[[ ! -d \$PERM/${frelout[$i]} ]] && mkdir $PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3288	cd $tmp_data_catalog
3289	all_files=`ls -1 ${frelout[$i]}/*`
3290	cd - > /dev/null
3291	(( inode = 0 ))
3292	(( tp1 = tasks_per_node + 1 ))
3293	while (( inode < nodes ))
3294	do
3295	# echo "*** all_files = \"$all_files\" "
3296	files=`echo $all_files \| cut -d" " -f1-$tasks_per_node`
3297	all_files=`echo $all_files \| cut -d" " -f$tp1-`
3298	# echo "*** tasks_per_node = \"$tasks_per_node\" "
3299	# echo "*** files = \"$files\" "
3300	# echo "*** all_files = \"$all_files\" "
3301	echo "tar cvf \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar $files" >> archive_${frelout[$i]}
3302	echo "dsmc incremental \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar" >> archive_${frelout[$i]}
3303	echo "dsmmigrate \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar" >> archive_${frelout[$i]}
3304	(( inode = inode + 1 ))
3305	done
3306	# echo "rm -rf \$PERM/${frelout[$i]}.tar" >> archive_${frelout[$i]}
3307	# echo "tar cvf \$PERM/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
3308	fi
3309	elif [[ $archive_system = ut ]]
3310	then
3311	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3312	if [[ $files_for_pes = false ]]
3313	then
3314	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3315	echo "set -x" >> archive_${frelout[$i]}
3316	echo "rm -rf \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3317	echo "cp ${frelout[$i]} \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3318	else
3319
3320	echo "set -x" >> archive_${frelout[$i]}
3321	echo "rm -rf \$UT/${frelout[$i]}/*" >> archive_${frelout[$i]}
3322	echo "[[ ! -d \$UT/${frelout[$i]} ]] && mkdir $UT/${frelout[$i]}" >> archive_${frelout[$i]}
3323	cd $tmp_data_catalog
3324	all_files=`ls -1 ${frelout[$i]}/*`
3325	cd - > /dev/null
3326	(( inode = 0 ))
3327	(( tp1 = tasks_per_node + 1 ))
3328	while (( inode < nodes ))
3329	do
3330	files=`echo $all_files \| cut -d" " -f1-$tasks_per_node`
3331	all_files=`echo $all_files \| cut -d" " -f$tp1-`
3332	echo "tar cvf \$UT/${frelout[$i]}/${frelout[$i]}.node_$inode.tar $files" >> archive_${frelout[$i]}
3333	(( inode = inode + 1 ))
3334	done
3335	fi
3336	elif [[ $archive_system = none ]]
3337	then
3338	printf " +++ archiving on $localhost not available!\n"
3339	fi
3340
3341	if [[ $archive_system != none ]]
3342	then
3343	if [[ $localhost = ibmh \|\| $localhost = ibmb ]]
3344	then
3345	subjob -d -v -q cdata -X 0 -m 1000 -t 7200 -f $filetransfer_protocol archive_${frelout[$i]}
3346	elif [[ $localhost = nech ]]
3347	then
3348	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 7200 -f $filetransfer_protocol archive_${frelout[$i]}
3349	fi
3350	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
3351	fi
3352	else
3353	printf " +++ caution: option -A is switched on. No archiving on $archive_system!\n"
3354	fi
3355
3356
3357	# LEERDATEI IM BENUTZERVERZEICHNIS ANLEGEN, DAMIT BEKANNT IST,
3358	# WIE DIE HOECHSTE ZYKLUSNUMMER AUF DEM ARCHIV-SYSTEM LAUTET
3359	if [[ $files_for_pes = false ]]
3360	then
3361	cat /dev/null > ${pathout[$i]}
3362	else
3363	mkdir -p ${pathout[$i]}
3364	fi
3365
3366	fi
3367
3368
3369	# KOPIEREN AUF LOKALER MASCHINE ZUM ARCHIV-SYSTEM
3370	# AUSSERDEM MUSS LEERDATEI ANGELEGT WERDEN, DAMIT BEKANNT IST,
3371	# WIE DIE HOECHSTE ZYKLUSNUMMER AUF DEM ARCHIV-SYSTEM LAUTET
3372	# FALLS IRGENDEINE (VON MEHREREN) ARCHIVIERUNGEN SCHIEF GEHT,
3373	# WIRD FLAG GESETZT UND BLEIBT AUCH BEI WEITEREN ORDNUNGS-
3374	# GEMAESSEN ARCHIVIERUNGEN GESETZT
3375	if [[ "${actionout[$i]}" = ar ]]
3376	then
3377	if [[ $files_for_pes = false ]]
3378	then
3379	printf "\n >>> OUTPUT: ${localout[$i]} to"
3380	printf "\n ${pathout[$i]}"
3381	printf "\n File will be copied to archive-system ($archive_system) !\n"
3382	else
3383	printf "\n >>> OUTPUT: ${localout[$i]}/_.... to"
3384	printf "\n ${pathout[$i]}"
3385	printf "\n Directory will be copied to archive-system ($archive_system) !\n"
3386	fi
3387	mv ${localout[$i]} ${frelout[$i]}
3388
3389	file_saved=false
3390
3391	if [[ $archive_system = asterix ]]
3392	then
3393	do_stageout=true
3394	(( stageout_anz = 0 ))
3395	while [[ $do_stageout = true ]]
3396	do
3397	if [[ $files_for_pes = false ]]
3398	then
3399	stageout ${frelout[$i]} > STAGE_OUTPUT
3400	else
3401	stageout -t ${frelout[$i]} > STAGE_OUTPUT
3402	fi
3403	cat STAGE_OUTPUT
3404	if [[ $(grep -c "st.msg:150" STAGE_OUTPUT) != 0 ]]
3405	then
3406	file_saved=true
3407	do_stageout=false
3408	else
3409	if [[ $files_for_pes = false ]]
3410	then
3411	printf "\n +++ file ${frelout[$i]} could not be saved on archive-system"
3412	else
3413	printf "\n +++ directory ${frelout[$i]} could not be saved on archive-system"
3414	fi
3415	(( stageout_anz = stageout_anz + 1 ))
3416	if (( stageout_anz == 10 ))
3417	then
3418	printf "\n +++ stoped after 10 unsuccessful tries!"
3419	archive_save=false
3420	do_stageout=false
3421	else
3422	printf "\n *** new try to store on archive after 15 min:"
3423	sleep 900
3424	fi
3425	fi
3426	done
3427	elif [[ $archive_system = DMF ]]
3428	then
3429	if [[ $files_for_pes = false ]]
3430	then
3431	printf "\n +++ archiving of single files impossible on $archive_system!\n"
3432	locat=DMF
3433	exit
3434	else
3435	rm -rf $ARCHIVE/${frelout[$i]}
3436	cp -r ${frelout[$i]} $ARCHIVE
3437	fi
3438	file_saved=true
3439	elif [[ $archive_system = tivoli ]]
3440	then
3441	# ARCHIVIERUNG NUR PER BATCH-JOB MOEGLICH
3442	# DATEI MUSS ZWISCHENZEITLICH INS TEMPORAERE DATENVERZEICHNIS
3443	# GELEGT WERDEN
3444	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
3445	chmod g+rx $tmp_data_catalog
3446	if [[ $files_for_pes = false ]]
3447	then
3448	ln -f ${frelout[$i]} $tmp_data_catalog/${frelout[$i]}
3449	else
3450	mkdir $tmp_data_catalog/${frelout[$i]}
3451	ln -f ${frelout[$i]}/* $tmp_data_catalog/${frelout[$i]}
3452	fi
3453
3454	# BATCH JOB GENERIEREN UND ABSCHICKEN; DATEI MUSS WIEDER
3455	# AUS TEMPORAEREM DATENVERZEICHNIS ENTFERNT WERDEN
3456	echo "cd $tmp_data_catalog" > archive_${frelout[$i]}
3457	if [[ $files_for_pes = false ]]
3458	then
3459	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3460	echo "rm -rf \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3461	echo "cp ${frelout[$i]} \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3462	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3463	else
3464	echo "rm -rf \$PERM/${frelout[$i]}.tar" >> archive_${frelout[$i]}
3465	echo "tar cvf \$PERM/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
3466	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3467	fi
3468
3469	subjob -v -d -q cdata -X 0 -m 1000 -t 7200 -f $filetransfer_protocol archive_${frelout[$i]}
3470	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
3471	file_saved=true
3472
3473	elif [[ $archive_system = ut ]]
3474	then
3475	# ARCHIVIERUNG NUR PER BATCH-JOB MOEGLICH
3476	# DATEI MUSS ZWISCHENZEITLICH INS TEMPORAERE DATENVERZEICHNIS
3477	# GELEGT WERDEN
3478	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
3479	chmod g+rx $tmp_data_catalog
3480	if [[ $files_for_pes = false ]]
3481	then
3482	ln -f ${frelout[$i]} $tmp_data_catalog/${frelout[$i]}
3483	else
3484	mkdir $tmp_data_catalog/${frelout[$i]}
3485	ln -f ${frelout[$i]}/* $tmp_data_catalog/${frelout[$i]}
3486	fi
3487
3488	# BATCH JOB GENERIEREN UND ABSCHICKEN; DATEI MUSS WIEDER
3489	# AUS TEMPORAEREM DATENVERZEICHNIS ENTFERNT WERDEN
3490	echo "cd $tmp_data_catalog" > archive_${frelout[$i]}
3491	if [[ $files_for_pes = false ]]
3492	then
3493	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3494	echo "rm -rf \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3495	echo "cp ${frelout[$i]} \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3496	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3497	else
3498	echo "rm -rf \$UT/${frelout[$i]}.tar" >> archive_${frelout[$i]}
3499	echo "tar cvf \$UT/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
3500	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3501	fi
3502
3503	subjob -v -c /pf/b/$usern/job_queue -d -q pp -X 0 -m 1000 -t 7200 -f $filetransfer_protocol archive_${frelout[$i]}
3504	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
3505	file_saved=true
3506
3507	else
3508	printf "\n +++ archive_system=\"$archive_system\" archiving impossible!"
3509	archive_save=false
3510	fi
3511	if [[ $file_saved = true ]]
3512	then
3513	if [[ $files_for_pes = false ]]
3514	then
3515	cat /dev/null > ${pathout[$i]}
3516	else
3517	mkdir -p ${pathout[$i]}
3518	fi
3519	fi
3520	fi
3521
3522	# APPEND AUF LOKALER MASCHINE
3523	if [[ "${actionout[$i]}" = "a" ]]
3524	then
3525	printf "\n >>> OUTPUT: ${localout[$i]} append to ${pathout[$i]}\n"
3526	cat ${localout[$i]} >> ${pathout[$i]}
3527	fi
3528
3529	# KOPIEREN AUF LOKALER MASCHINE
3530	# ES MUSS KOPIERT WERDEN, DA MOVE NICHT UEBER FILESYSTEM HINAUS MOEGLICH
3531	if [[ "${actionout[$i]}" = "" && $files_for_pes = false ]]
3532	then
3533
3534	# KOPIEREN AUF EINPROZESSORMASCHINE
3535	if [[ "${extout[$i]}" != " " && "${extout[$i]}" != "" ]]
3536	then
3537	printf "\n >>> OUTPUT: ${localout[$i]} to ${pathout[$i]}.${extout[$i]}\n"
3538	cp ${localout[$i]} ${pathout[$i]}.${extout[$i]}
3539	else
3540	printf "\n >>> OUTPUT: ${localout[$i]} to ${pathout[$i]}\n"
3541	cp ${localout[$i]} ${pathout[$i]}
3542	fi
3543
3544	elif [[ "${actionout[$i]}" = "" && $files_for_pes = true ]]
3545	then
3546
3547	# DIE DEN PROZESSOREN EINES PARALLELRECHNERS ZUGEHOERIGEN
3548	# DATEIEN WERDEN ERST IN EINEM KATALOG GESAMMELT UND DIESER
3549	# WIRD DANN KOPIERT
3550	# PER MOVE UMBENANNT WERDEN
3551	printf "\n >>> OUTPUT: ${localout[$i]}/_.... to ${pathout[$i]}\n"
3552	cp -r ${localout[$i]} ${pathout[$i]}
3553
3554	fi
3555	fi
3556	done
3557	if (( i != 0 ))
3558	then
3559	if [[ $transfer_problems = true ]]
3560	then
3561	printf "\n$striche\n *** OUTPUT-files saved"
3562	printf "\n +++ WARNING: some data transfers failed! \n"
3563	else
3564	printf "\n$striche\n *** all OUTPUT-files saved \n"
3565	fi
3566	fi
3567
3568
3569	# EVENTUELL FOLGEJOB STARTEN
3570	# DATEI CONTINUE_RUN MUSS VOM BENUTZERPROGRAMM AUS ERZEUGT WERDEN
3571	if [[ -f CONTINUE_RUN ]]
3572	then
3573
3574	if [[ $archive_save = true ]]
3575	then
3576
3577	# ZUERST IN MRUN-AUFRUF OPTIONEN FUER FORTSETZUNGSLAUF, FUER
3578	# STILLES ABARBEITEN (OHNE INTERAKTIVE RUECKFAGEN) UND FUER
3579	# BATCH-BETRIEB (NUR WICHTIG, FALLS BATCH AUF LOKALER MASCHINE
3580	# DURCHGEFUEHRT WERDEN SOLL) EINFUEGEN, FALLS NICHT BEREITS VOR-
3581	# HANDEN
3582	[[ $(echo $mc \| grep -c "\-C") = 0 ]] && mc="$mc -C"
3583	[[ $(echo $mc \| grep -c "\-v") = 0 ]] && mc="$mc -v"
3584	[[ $(echo $mc \| grep -c "\-b") = 0 ]] && mc="$mc -b"
3585	if [[ $(echo $mc \| grep -c "#") != 0 ]]
3586	then
3587	mc=`echo $mc \| sed 's/#/f/g'`
3588	fi
3589
3590
3591	# JOB STARTEN
3592	printf "\n\n *** initiating restart-run on \"$return_addres\" using command:\n"
3593	echo " $mc"
3594	printf "\n$striche\n"
3595	if [[ $localhost != $fromhost ]]
3596	then
3597
3598	if [[ $localhost = nech \|\| $localhost = ibmb \|\| $localhost = ibmh \|\| $localhost = ibms \|\| $localhost = lctit ]]
3599	then
3600	echo "*** ssh will be used to initiate restart-runs!"
3601	echo " return_addres=\"$return_addres\" "
3602	echo " return_username=\"$return_username\" "
3603	if [[ $return_addres = 172.20.25.41 ]]
3604	then
3605	# WORKAROUND AUF SCIROCCO AM TIT
3606	print "PATH=\$PATH:$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc " \| ssh $return_addres -l $return_username
3607	else
3608	ssh $return_addres -l $return_username "PATH=\$PATH:$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc "
3609	fi
3610	else
3611	printf "\n +++ no restart mechanism available for host \"$localhost\" "
3612	locat=restart; exit
3613	fi
3614
3615	# WARTEN, DAMIT SICH RESTART JOB IN QUEUE EINREIHEN KANN, BEVOR
3616	# DER AKTUELLE JOB ENDET
3617	sleep 30
3618
3619	else
3620
3621	# BEI RECHNUNGEN AUF LOKALER MASCHINE KANN MRUN DIREKT AUFGE-
3622	# RUFEN WERDEN
3623	cd $LOCAL_PWD
3624	eval $mc # ' MUESSEN AUSGEWERTET WERDEN
3625	cd - > /dev/null
3626	fi
3627	printf "\n$striche\n *** restart-run initiated \n"
3628
3629
3630	# EVENTUELL INPUT-DATEIEN, DIE VON TEMPORAEREM DATENVERZEICHNIS
3631	# GEHOLT WORDEN SIND, LOESCHEN
3632	(( i = 0 ))
3633	while (( i < iin ))
3634	do
3635	(( i = i + 1 ))
3636	if [[ "${got_tmp[$i]}" = true && $keep_data_from_previous_run = false ]]
3637	then
3638	rm -r $tmp_data_catalog/${frelin[$i]}
3639	fi
3640	done
3641
3642	else
3643
3644	printf "\n +++ no restart-run possible, since errors occured"
3645	printf "\n during the archive process"
3646	fi
3647
3648	fi
3649
3650
3651
3652	# EVTL. EMAIL-BENACHRICHTIGUNG UEBER ABGESCHLOSSENEN LAUF
3653	if [[ "$email_notification" != "" ]]
3654	then
3655
3656	if [[ $localhost != $fromhost ]]
3657	then
3658	if [[ -f CONTINUE_RUN ]]
3659	then
3660	echo "PALM restart run necessary" > email_text
3661	echo "description header of actual run:" >> email_text
3662	cat CONTINUE_RUN >> email_text
3663	echo "mrun-command to restart:" >> email_text
3664	echo "$mc" >> email_text
3665	else
3666	echo "PALM run with base filename \"$fname\" on host \"$localhost\" finished" > email_text
3667	fi
3668	mail $email_notification < email_text
3669	printf "\n *** email notification sent to \"$email_notification\" "
3670	fi
3671	fi
3672
3673
3674
3675	# ALLE ARBEITEN BEENDET. TEMPORAERER KATALOG KANN GELOESCHT WERDEN
3676	cd $HOME
3677	[[ $delete_temporary_catalog = true ]] && rm -rf $TEMPDIR
3678
3679	else
3680
3681
3682	# FALLS AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL, WERDEN JETZT ENTSPRE-
3683	# CHENDE AKTIONEN DURCHGEFUEHRT
3684
3685	# MRUN-BEFEHL FUER REMOTE-MASCHINE ZUSAMMENSTELLEN
3686	mrun_com="$mrun_script_name -a $afname -c $config_file -d $fname -f $filetransfer_protocol -h $host -H $fromhost -m $memory -t $cpumax -q $queue -R $return_addres -U $return_username -u $remote_username"
3687	[[ "$cpp_opts" != "" ]] && mrun_com=${mrun_com}" -D \"$cpp_opts\""
3688	[[ $do_compile = true ]] && mrun_com=${mrun_com}" -s \"$source_list\""
3689	[[ "$input_list" != "" ]] && mrun_com=${mrun_com}" -i \"$input_list\""
3690	[[ $ignore_archive_error = true ]] && mrun_com=${mrun_com}" -I"
3691	[[ $keep_data_from_previous_run = true ]] && mrun_com=${mrun_com}" -k"
3692	[[ "$additional_conditions" != "" ]] && mrun_com=${mrun_com}" -K \"$additional_conditions\""
3693	# [[ "$makefile" != "$source_path/Makefile" ]] && mrun_com=${mrun_com}" -M \"$makefile\""
3694	[[ "$output_list" != "" ]] && mrun_com=${mrun_com}" -o \"$output_list\""
3695	[[ "$read_from_config" = false ]] && mrun_com=${mrun_com}" -S"
3696	[[ $do_trace = true ]] && mrun_com=${mrun_com}" -x"
3697	[[ "$numprocs" != "" ]] && mrun_com=${mrun_com}" -X $numprocs"
3698	if [[ $use_openmp = true ]]
3699	then
3700	mrun_com=${mrun_com}" -O"
3701	[[ "$tasks_per_node" != "" ]] && mrun_com=${mrun_com}" -T $threads_per_task"
3702	else
3703	[[ "$tasks_per_node" != "" ]] && mrun_com=${mrun_com}" -T $tasks_per_node"
3704	fi
3705	[[ $store_on_archive_system = false ]] && mrun_com=${mrun_com}" -A"
3706	[[ $package_list != "" ]] && mrun_com=${mrun_com}" -p \"$package_list\""
3707	[[ $return_password != "" ]] && mrun_com=${mrun_com}" -P $return_password"
3708	[[ $delete_temporary_catalog = false ]] && mrun_com=${mrun_com}" -B"
3709	[[ $node_usage != default ]] && mrun_com=${mrun_com}" -n $node_usage"
3710	if [[ $do_remote = true ]]
3711	then
3712	printf "\n>>>> MRUN-command on execution host:\n>>>> $mrun_com \n"
3713	fi
3714
3715
3716	# ZUSAMMENSTELLUNG DES JOBSCRIPTS AUF DATEI jobfile
3717	jobfile=jobfile.$RANDOM
3718
3719
3720	# TEMPORAERES VERZEICHNIS GENERIEREN UND NACH DORT WECHSELN
3721	echo "mkdir $TEMPDIR" >> $jobfile
3722	echo "cd $TEMPDIR" >> $jobfile
3723
3724
3725	# EVENTUELL FEHLERVERFOLGUNG AKTIVIEREN
3726	if [[ $do_trace = true ]]
3727	then
3728	echo "set -x" >> $jobfile
3729	else
3730	echo "set +vx" >> $jobfile
3731	fi
3732
3733
3734	# ABSPEICHERN DER QUELLTEXTE (NUR FALLS UEBERSETZT WERDEN SOLL)
3735	# SOWIE GEGEBENENFALLS DES MAKEFILES
3736	if [[ $do_compile = true ]]
3737	then
3738
3739	source_catalog=SOURCES_FOR_RUN_$fname
3740
3741	# UNTERVERZEICHNIS FUER QUELLTEXTE UND MAKEFILE ANLEGEN
3742	# MRUN WIRD DIESES VRZEICHNIS UEBER ENVIRONMENT VARIABLE
3743	# MITGETEILT (UEBERSTEUERT ANGABE IN KONFIGURATIONSDATEI)
3744	echo "mkdir SOURCES_FOR_RUN_$fname" >> $jobfile
3745	echo "export SOURCES_COMPLETE=true" >> $jobfile
3746	echo "cd SOURCES_FOR_RUN_$fname" >> $jobfile
3747
3748	for filename in $source_list
3749	do
3750	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
3751	echo "cat > $filename << \"%END%\"" >> $jobfile
3752	cat $source_catalog/$filename >> $jobfile
3753	echo " " >> $jobfile
3754	echo "%END%" >> $jobfile
3755	echo " " >> $jobfile
3756	done
3757
3758	if [[ "$use_makefile" = true ]]
3759	then
3760	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
3761	echo "cat > Makefile << \"%END%\"" >> $jobfile
3762	cat $source_catalog/Makefile >> $jobfile
3763	echo " " >> $jobfile
3764	echo "%END%" >> $jobfile
3765	echo " " >> $jobfile
3766	fi
3767
3768	echo "cd - > /dev/null" >> $jobfile
3769
3770	fi
3771
3772
3773	# ABSPEICHERN DER KONFIGURATIONSDATEI
3774	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
3775	echo "cat > $config_file << \"%END%\"" >> $jobfile
3776	cat $config_file >> $jobfile
3777	echo "%END%" >> $jobfile
3778	echo " " >> $jobfile
3779
3780
3781	# ABSPEICHERN DER AKTUELLEN MRUN-VERSION
3782	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
3783	echo "cat > $mrun_script_name <<\"%END%\"" >> $jobfile
3784	cat ${mrun_path}/$mrun_script_name >> $jobfile
3785	echo "%END%" >> $jobfile
3786	if [[ $host = lctit ]]
3787	then
3788	echo "sed 's/bin\/ksh/home2\/usr5\/mkanda\/pub\/ksh/' < $mrun_script_name > mrun_new" >> $jobfile
3789	echo "mv mrun_new $mrun_script_name" >> $jobfile
3790	fi
3791	echo "chmod u+x $mrun_script_name" >> $jobfile
3792	echo "execute_mrun=true" >> $jobfile
3793	echo " " >> $jobfile
3794
3795	# EVTL. BENOETIGTE INPUT-DATEIEN PER FTP HOLEN ODER DEM JOB DIREKT
3796	# MITGEBEN UND AUF DEM REMOTE-RECHNER IM BENUTZERVERZEICHNIS ABLEGEN
3797	# FALLS DIESES NICHT EXISTIERT, WIRD VERSUCHT, DAS JEWEILS LETZTE
3798	# UNTERVERZEICHNIS DES PFADNAMENS ANZULEGEN
3799	if [[ $do_remote = true ]]
3800	then
3801	(( i = 0 ))
3802	while (( i < iin ))
3803	do
3804	(( i = i + 1 ))
3805	echo "[[ ! -d ${pathin[$i]} ]] && mkdir -p ${pathin[$i]}" >> $jobfile
3806	if [[ "${transin[$i]}" = job ]]
3807	then
3808	echo "cat > ${remotepathin[$i]} <<\"%END%\"" >> $jobfile
3809	eval cat ${pathin[$i]}/${frelin[$i]} >> $jobfile
3810	echo " " >> $jobfile
3811	echo "%END%" >> $jobfile
3812	else
3813	if [[ $filetransfer_protocol = ftp ]]
3814	then
3815	echo "ftpcopy -b -o -g -s $return_addres ${remotepathin[$i]} \"${pathin[$i]}\" ${frelin[$i]}" >> $jobfile
3816	else
3817	echo "batch_scp -b -o -g -s -u $return_username $return_addres ${remotepathin[$i]} \"${pathin[$i]}\" ${frelin[$i]}" >> $jobfile
3818	fi
3819	fi
3820
3821	# UEBERPRUEFEN, OB DATEI ANGELEGT WERDEN KONNTE
3822	echo "if [[ \$? = 1 ]]" >> $jobfile
3823	echo "then" >> $jobfile
3824	echo " echo \" \" " >> $jobfile
3825	echo " echo \"+++ file ${remotepathin[$i]} could not be created\" " >> $jobfile
3826	echo " echo \" please check, if directory exists on $host!\" " >> $jobfile
3827	echo " echo \"+++ MRUN will not be continued\" " >> $jobfile
3828	echo " execute_mrun=false" >> $jobfile
3829	echo "fi" >> $jobfile
3830	done
3831	fi
3832
3833	# ARBEITSKATALOG AUF DER LOKALEN MASCHINE FUER EVENTUELLE
3834	# FORTSETZUNGSLAUEFE PER ENV-VARIABLE UEBERGEBEN
3835	echo "LOCAL_PWD=$working_directory" >> $jobfile
3836	echo "export LOCAL_PWD" >> $jobfile
3837
3838	# EBENSO LOKALEN MRUN-KATALOG UEBERGEBEN
3839	echo "LOCAL_MRUN_PATH=$mrun_path" >> $jobfile
3840	echo "export LOCAL_MRUN_PATH" >> $jobfile
3841
3842	# echo "for_subjob_to_do=\"rm -rf $TEMPDIR\" " >> $jobfile
3843
3844	# MRUN AUF ZIELRECHNER AUFRUFEN
3845	echo "set -x" >> $jobfile
3846	echo "[[ \$execute_mrun = true ]] && ./$mrun_com" >> $jobfile
3847
3848	echo 'ls -al; echo `pwd`' >> $jobfile
3849	echo "cd \$HOME" >> $jobfile
3850	echo "rm -rf $TEMPDIR" >> $jobfile
3851
3852
3853
3854
3855	# JOB PER SUBJOB STARTEN
3856	if [[ $silent = false ]]
3857	then
3858	printf "\n "
3859	else
3860	printf "\n\n"
3861	fi
3862
3863	subjob $job_on_file -h $host -u $remote_username -q $queue -m $memory -N $node_usage -t $cpumax $XOPT $TOPT $OOPT -n $fname -f $filetransfer_protocol -v $jobfile
3864	rm -rf $jobfile
3865
3866
3867	fi # ENDE REMOTE-TEIL
3868
3869
3870
3871	# ENDE DER PROZEDUR

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