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source: palm/trunk/SCRIPTS/mrun_new @ 14

Last change on this file since 14 was 14, checked in by raasch, 18 years ago
dvrp library path adjusted for nech
File size: 147.2 KB

Line
1	#!/bin/ksh
2
3	##!/home/DSRC/NC/tatuyama/pub/ksh NEEDED ON NEC AT RIAM !!!!!!!!!!
4
5	# mrun - Plot-Shellskript Version: @(#)MRUN 1.8 10/02/07
6
7	# Prozedur zum Starten von Modellaeufen
8
9	# letzte Aenderung:
10	# 03/03/94 - Siggi - Entwicklungsbeginn
11	# 21/03/94 - Siggi - Entwicklungsabschluss (Version 1.0)
12	# 09/12/94 - Siggi - allexport unterbunden; statt dessen werden jetzt ein-
13	# zelne Variable exportiert. Dies ist noetig, weil an-
14	# sonsten irgendein Speicher ueberlaeuft und von mrun
15	# aufgerufene Programme (z.B. stageout) mit Fehlern
16	# abbrechen (too many arguments)
17	# 20/06/95 - Siggi - noclobber muss explizit abgeschaltet, da jetzt
18	# defaultmaessig im RRZN-Profile eingeschaltet
19	# 10/06/97 - Siggi - Zusaetzliche Option -C bei cpp, damit // nicht
20	# wegfallen
21	# 25/04/00 - Siggi - Version 1.5
22	# remote_addres und remote_user in return_addres bzw.
23	# return_username umbenannt, return_username wird dem
24	# mrun-Aufruf im Job ueber Option -U mitgegeben.
25	# Neue Variable remote_username, die beim interaktiven
26	# mrun-Aufruf zwingend ueber die neue Option -u oder
27	# in der Konfigurationsdatei angegeben werden muss.
28	# 08/02/01 - Siggi - Alle mrun-Meldungen ins englische uebersetzt,
29	# Version 1.7
30	# 05/05/02 - Siggi - Uebersetzungen mittels make-Mechanismus moeglich
31	# 21/11/02 - Siggi - ENV-Variable XLFRTEOPTS wird vor Ausfuehrung auf
32	# IBM gesetzt, um Record-Laenge der NAMELIST-Dateien,
33	# zu bestimmen; Praeprozessoroptionen haben nun alle
34	# die Form -Dtext=text, weil auf IBM sonst text durch
35	# die leere Zeichenkette ersetzt wird
36	# 01/08/03 - Siggi - Test of implementing dvrp+1PE on ibm
37	# 07/01/04 - Siggi - additional preprocessor directive for ibm included
38	# (-D$OMP=OMP) in order to avoid problems with
39	# OMP_NUM_THREADS
40	# 04/01/05 - Siggi - archiving on hanni and berni is done in separate
41	# tar files, one for each node used
42	# 07/01/04 - Siggi - old code for t3e, vpp and hpcs eliminated
43	# 09/01/05 - Siggi - workaround for getting the IP address on gfdl3
44	# 17/01/05 - Siggi - job for data transfer to local machine now within
45	# job class c1 (HLRN)
46	# 27/01/05 - Siggi - IP address workaround for gfdl3 removed
47	# 28/01/05 - Siggi - tar-filenames on $PERM (HLRN) now include the
48	# base filename and cycle number
49	# 16/02/05 - Gerald - hababai validated
50	# 14/03/05 - Siggi - abort on NEC after first runtime error (F_ERRCNT)
51	# 29/03/05 - Marcus - berni*-en0 validated
52	# 21/04/05 - Siggi - transfer-job-protocol for avs-data is no more stored
53	# 24/04/05 - Siggi - netcdf support on lcmuk
54	# 25/04/05 - Siggi - netcdf support on gfld3 (decalpha)
55	# 11/05/05 - Siggi - files with non-numeric extensions (.xxx after cycle
56	# number) can now be used within interactive runs
57	# 12/05/05 - Siggi - netcdf support on ibm
58	# 13/05/05 - Siggi - error in tar-filenames on $PERM (HLRN) removed
59	# 18/05/05 - Siggi - netcdf support on nec
60	# 24/05/05 - Siggi - netcdf support on ibms
61	# 14/06/05 - Siggi - sleep interval after submit of restart job increased
62	# to 30 seconds
63	# 28/06/05 - Siggi - bora adjusted to new intel compiler (LD_LIBRARY_
64	# PATH is temporarily set)
65	# 07/09/05 - Siggi - setting of MP_EAGER_LIMIT switched off because it
66	# caused warnings in the job protocol
67	# 20/10/05 - Siggi - update of netcdf-version on decalpha (gfdl3)
68	# 25/10/05 - Siggi - error in listing files for getting the cycle number
69	# removed
70	# 26/10/05 - Siggi - new paths for dvrp-library, transfer of catalogs
71	# realized by file attribute trpe
72	# 28/10/05 - Siggi - if existing, the file extension is output in case
73	# of missing input file - no job abort in case of
74	# missing input files with file extensions
75	# (preliminary solution)
76	# 31/10/05 - Siggi - data transfer from nech now within seperate job
77	# 04/11/05 - Siggi - netcdf 3.6.0-p1 on ibmh/ibmb
78	# 07/12/05 - Siggi - gallego and elephanta admitted
79	# 30/12/05 - Siggi - gfdl5 (ibmy) admitted
80	# 10/01/06 - Siggi - cpp directive for NetCDF 64bit support
81	# 20/01/06 - Siggi - cpp directive for ibmy
82	# 09/02/06 - Siggi - ibmy admitted for batch mode
83	# 13/04/06 - Siggi - ostria admitted
84	# 18/04/06 - Siggi - usage of OpenMP implemented (additional option -O)
85	# 10/05/06 - Siggi - environment variable XLSMPOPTS set on IBM for
86	# optimization of OpenMP runs (option stacksize is
87	# necessary for large gridpoint numbers because
88	# otherwise a segmentation fault occurs)
89	# 23/05/05 - Siggi - lctit (SUN Fire X4600) admitted
90	# 21/08/06 - Siggi - standard mrun path on scirocco is as on bora
91	# 23/08/06 - Siggi - netcdf support for scirocco (notebook)
92	# 20/09/06 - Marcus - add DVRP library on nech
93	# 24/10/06 - Siggi - Environment variables for PALM steering are written
94	# on local NAMELIST file ENVPAR
95	# 24/11/06 - Siggi - levanto admitted, maestro switched to ifc 9.1
96	# 28/11/06 - Siggi - call to interpret_config.x_levanto because of SuSe 10
97	# 06/02/07 - Siggi - add DVRP library on lcmuk
98	# 07/02/07 - Siggi - revision of source code handling, source code is
99	# now expected in directory given by source_path and
100	# not in the current working directory, source code
101	# files provided in add_source_path are allways
102	# compiled, source code to be compiled is allways
103	# sampled in SOURCES_FOR_RUN_$fname which is a
104	# subdirectory of the current working directory,
105	# -s TEST changed to -s WRITE_PERMIT or -s WP,
106	# adapted for RIAM (neck)
107	# bugfix for cycle number of output file (extout)
108	# all hpmuk-related code removed
109	# 14/02/07 - Siggi - dvrp support for neck added
110
111
112
113
114	# VARIABLENVEREINBARUNGEN + DEFAULTWERTE
115
116	set +o allexport # SICHERHEITSHALBER UNTERBINDEN, DA SONST EVTL. STAGEOUT
117	# NICHT LAUEFT (TOO MANY ARGUMENTS - PROBLEM)
118	set +o noclobber # EXISTIERENDE DATEIEN DUERFEN UEBERSCHRIEBEN WERDEN
119
120	AddFilenames=""
121	additional_conditions=""
122	add_source_path=""
123	afname=""
124	archive_save=true
125	archive_system=none
126	compiler_name=""
127	cond1=""
128	cond2=""
129	config_file=.mrun.config
130	cpp_opts=""
131	cpumax=0
132	cpurest=0
133	delete_temporary_catalog=true
134	do_batch=false
135	do_compile=true
136	do_remote=false
137	do_stagein=true
138	do_stageout=true
139	do_trace=false
140	email_notification=""
141	exclude=""
142	executable=""
143	execution_error=false
144	filetransfer_protocol=""
145	fname=test
146	fromhost=""
147	host=""
148	host_file=""
149	hp=""
150	ignore_archive_error=false
151	input_list=""
152	interpreted_config_file=""
153	job_on_file=""
154	keep_data_from_previous_run=false
155	localhost_realname=$(hostname)
156	local_compile=false
157	locat=normal
158	mainprog=""
159	makefile=""
160	mc=$0
161	while [[ $(echo $mc \| grep -c "/") != 0 ]]
162	do
163	mc=`echo $mc \| cut -f2- -d"/"`
164	done
165	module_files=""
166	MODULE_OPTIONS=""
167	mrun_script_name=$mc
168	netcdf_support=false
169	node_usage=default
170	numprocs=""
171	OOPT=""
172	openmp=false
173	output_list=""
174	package_list=""
175	punkte="..........................................................."
176	queue=none
177	read_from_config=""
178	restart_run=false
179	return_addres=$(nslookup `hostname` 2>&1 \| grep "Address:" \| tail -1 \| awk '{print $2}')
180	if [[ $return_addres = 130.75.105.158 ]]
181	then
182	return_addres=172.20.25.41
183	echo "+++ WARNING: return_addres changed to $return_addres !!!!!"
184	fi
185	# if [[ $return_addres = 210.117.65.1 ]]
186	# if [[ $(nslookup `hostname` 2>&1 \| grep -c 210.117.65.1) = 1 ]]
187	# then
188	# [[ $localhost_realname = gfdl3.yonsei.ac.kr ]] && return_addres=165.132.26.56
189	# fi
190	return_password=""
191	return_username=$LOGNAME
192	remotecall=false
193	remote_username=""
194	run_mode=""
195	scirocco=false
196	store_on_archive_system=true
197	striche=" ----------------------------------------------------------------------------"
198	silent=false
199	source_list=""
200	source_path=SOURCE
201	tasks_per_node=""
202	threads_per_task=1
203	tmpcreate=false
204	tmp_data_catalog=""
205	transfer_problems=false
206	usern=$LOGNAME
207	use_makefile=""
208	working_directory=`pwd`
209	TOPT=""
210	XOPT=""
211	zeit=$( date \| cut -c 12-19 )
212
213	typeset -i iec=0 iic=0 iin=0 ioc=0 iout=0 memory=0 stagein_anz=0 stageout_anz=0
214	typeset -i cputime i ii icycle inode ival jobges jobsek maxcycle minuten nodes pes sekunden tp1
215
216	typeset -R40 calltime
217	typeset -L20 spalte1
218	typeset -L40 spalte2
219	typeset -L60 spalte3
220	typeset -L35 string1=`date`
221	typeset -L12 string2=$usern
222	typeset -L12 string3=$localhost_realname
223	typeset -L12 string4
224	typeset -L12 string5
225	typeset -L20 version="MRUN 1.8"
226
227
228
229	# EINZELNE VARIABLE FUER HAUPTPROGRAMM EXPORTIEREN
230	export cpurest fname host localhost return_addres return_username remotecall tasks_per_node
231
232	# FOLGENDE VARIABLEN MUESSEN FUER DIE INTERPRETATION DER KONFIGURATIONSDATEI
233	# EXPORTIERT WERDEN
234	export afname config_file cpp_opts cpumax do_batch do_trace fname fromhost
235	export input_list memory numprocs output_list queue run_mode
236
237
238
239	# FEHLERBEHANDLUNG
240	# BEI EXIT:
241	trap 'if [[ $locat != localhost ]]
242	then
243	if [[ ! -f ${mrun_path}/statistik/mrun_statistik ]]
244	then
245	cat > ${mrun_path}/statistik/mrun_statistik << %STATEND%
246	MRUN-calls on $localhost
247
248	date and time user localhost remotehost termination mrun-command
249	--------------------------------------------------------------------------------------------------------------------
250	%STATEND%
251	chmod 666 ${mrun_path}/statistik/mrun_statistik
252	fi
253
254	# EINTRAG IN DIE STATISTIK-DATEI
255	string4=$host
256	string5=$locat
257	if [[ "$job_on_file" = "" && $locat != control_c && $locat != user_abort ]]
258	then
259	if [[ $do_batch = true ]]
260	then
261	printf "$string1$string2$string3$string4$string5$mrun_com \n" >> ${mrun_path}/statistik/mrun_statistik
262	else
263	printf "$string1$string2$string3$string4$string5$mc \n" >> ${mrun_path}/statistik/mrun_statistik
264	fi
265	fi
266	fi
267
268	if [[ $locat != normal && $locat != control_c && $locat != local_compile ]]
269	then
270
271	# EVENTUELLE ERROR-KOMMANDOS ABARBEITEN
272	(( i = 0 ))
273	while (( i < iec ))
274	do
275	(( i = i + 1 ))
276	printf "\n *** Execution of ERROR-command:\n"
277	printf " >>> ${err_command[$i]}\n"
278	eval ${err_command[$i]}
279	done
280	if [[ -n $interpreted_config_file ]] then
281	rm -rf $interpreted_config_file
282	fi
283	if [[ $tmpcreate = true ]]
284	then
285	printf "\n *** Contents of \"$TEMPDIR\":\n"
286	ls -al; cd
287	[[ $delete_temporary_catalog = true ]] && rm -rf $TEMPDIR
288	fi
289	if [[ -f ~/job_queue/JOBINFO.$QSUB_REQID ]]
290	then
291	rm -rf ~/job_queue/JOBINFO.$QSUB_REQID
292	fi
293	printf "\n\n+++ MRUN killed \n\n"
294	elif [[ $locat != control_c ]]
295	then
296	printf "\n\n --> all actions finished\n\n"
297	printf " Bye, bye $usern !!\n\n"
298	fi' exit
299
300
301	# BEI TERMINAL-BREAK:
302	trap '[[ $tmpcreate = true ]] && (cd; rm -rf $TEMPDIR)
303	if [[ -f ~/job_queue/JOBINFO.$QSUB_REQID ]]
304	then
305	rm -rf ~/job_queue/JOBINFO.$QSUB_REQID
306	fi
307	printf "\n+++ MRUN killed by \"^C\" \n\n"
308	locat=control_c
309	exit
310	' 2
311
312
313	# EVTL. NAMEN DES LOKALEN RECHNERS MIT UEBERGREIFENDEM NAMEN VERSEHEN
314	case $localhost_realname in
315	(atmos) mrun_path=/home/siggi/pub
316	localhost=lcide;;
317	(bora\|breva\|elephanta\|gallego\|gregale\|hababai\|irifi\|levanto\|maestro\|orkan\|ostria\|poniente\|quanero\|scirocco\|vorias) mrun_path=/home/raasch/pub
318	localhost=lcmuk;;
319	(breg-en0\|berni-en0) mrun_path=/home/b/niksiraa/pub
320	localhost=ibmb; archive_system=tivoli;;
321	(cs*) mrun_path=/pf/b/b323011/pub
322	localhost=nech; archive_system=ut;;
323	(gate\|n-sx) mrun_path=/home/DSRC/NC/tatuyama/pub
324	PATH=$PATH:/usr/bin/nqsII:$mrun_path
325	localhost=neck;;
326	(ground.yonsei.ac.kr) mrun_path=/usr/users/raasch/pub
327	localhost=decalpha;;
328	(gfdl3.yonsei.ac.kr) mrun_path=/usr2/users/raasch/pub
329	localhost=decalpha;;
330	(gfdl5) mrun_path=/usr1/users/raasch/pub
331	localhost=ibmy;;
332	(gwdk081.gwdg.de\|gwdk082.gwdg.de\|gwdk083.gwdg.de) mrun_path=/usr/users/sraasch/pub
333	localhost=ibm;;
334	(hreg-en0\|hanni-en0) mrun_path=/home/h/niksiraa/pub
335	localhost=ibmh; archive_system=tivoli;;
336	(nobel*) mrun_path=/edun/z051nyg/pub
337	localhost=ibms;;
338	(sun1\|sun2) mrun_path=/home/nhbksira/pub/
339	localhost=unics;;
340	(tgg*) mrun_path=/home2/usr5/mkanda/pub
341	localhost=lctit;;
342	(*) printf "\n +++ Host \"$localhost_realname\" not admitted for mrun \n"
343	locat=localhost; exit;;
344	esac
345
346	[[ $localhost_realname = scirocco ]] && scirocco=true
347
348
349
350	# SHELLSCRIPT-OPTIONEN EINLESEN UND KOMMANDO NEU ZUSAMMENSETZEN, FALLS ES
351	# FUER FOLGEJOBS BENOETIGT WIRD
352	while getopts :a:AbBc:Cd:D:f:Fh:H:i:IkK:m:M:n:o:Op:P:q:r:R:s:St:T:u:U:vxX: option
353	do
354	case $option in
355	(a) afname=$OPTARG;;
356	(A) store_on_archive_system=false; mc="$mc -A";;
357	(b) do_batch=true; mc="$mc -b";;
358	(B) delete_temporary_catalog=false; mc="$mc -B";;
359	(c) config_file=$OPTARG; mc="$mc -c$OPTARG";;
360	(C) restart_run=true; mc="$mc -C";;
361	(d) fname=$OPTARG; mc="$mc -d$OPTARG";;
362	(D) cpp_opts="$cpp_opts $OPTARG"; mc="$mc -D$OPTARG";;
363	(f) filetransfer_protocol=$OPTARG; mc="$mc -f$OPTARG";;
364	(F) job_on_file="-D"; mc="$mc -F";;
365	(h) host=$OPTARG; mc="$mc -h$OPTARG";;
366	(H) fromhost=$OPTARG; mc="$mc -H$OPTARG";;
367	(i) input_list=$OPTARG; mc="$mc -i'$OPTARG'";;
368	(I) ignore_archive_error=true; mc="$mc -I";;
369	(k) keep_data_from_previous_run=true; mc="$mc -k";;
370	(K) additional_conditions="$OPTARG"; mc="$mc -K$OPTARG";;
371	(m) memory=$OPTARG; mc="$mc -m$OPTARG";;
372	(M) makefile=$OPTARG; mc="$mc -M$OPTARG";;
373	(n) node_usage=$OPTARG; mc="$mc -n$OPTARG";;
374	(o) output_list=$OPTARG; mc="$mc -o'$OPTARG'";;
375	(O) use_openmp=true; mc="$mc -O";;
376	(p) package_list=$OPTARG; mc="$mc -p'$OPTARG'";;
377	(P) return_password=$OPTARG; mc="$mc -P$OPTARG";;
378	(q) queue=$OPTARG; mc="$mc -q$OPTARG";;
379	(r) run_mode=$OPTARG; mc="$mc -r'$OPTARG'";;
380	(R) remotecall=true;return_addres=$OPTARG; mc="$mc -R$OPTARG";;
381	(s) source_list=$OPTARG; mc="$mc -s'$OPTARG'";;
382	(S) read_from_config=false; mc="$mc -S";;
383	(t) cpumax=$OPTARG; mc="$mc -t$OPTARG";;
384	(T) tasks_per_node=$OPTARG; mc="$mc -T$OPTARG";;
385	(u) remote_username=$OPTARG; mc="$mc -u$OPTARG";;
386	(U) return_username=$OPTARG; mc="$mc -U$OPTARG";;
387	(v) silent=true; mc="$mc -v";;
388	(x) do_trace=true;set -x; mc="$mc -x";;
389	(X) numprocs=$OPTARG; mc="$mc -X$OPTARG";;
390	(\?) printf "\n +++ unknown option $OPTARG \n"
391	printf "\n --> type \"$0 ?\" for available options \n"
392	locat=parameter;exit;;
393	esac
394	done
395
396
397	# EVTL. POSITIONSPARAMETER EINLESEN
398	# ZUR ZEIT GIBT ES NUR DEN PARAMETER ? (=KURZINFO)
399	shift OPTIND-1
400
401
402	# KURZE AUFRUFBESCHREIBUNG WIRD HIER AUSGEGEBEN
403	if [[ "$1" = "?" ]]
404	then
405	(printf "\n *** mrun can be called as follows:\n"
406	printf "\n $mrun_script_name -b -c.. -d.. -D.. -f.. -F -h.. -i.. -I -K.. -m.. -o.. -p.. -r.. -R -s.. -t.. -T.. -v -x -X.. <modus>\n"
407	printf "\n Description of available options:\n"
408	printf "\n Option Description Default-Value"
409	printf "\n -a base name of input files equiv. -d"
410	printf "\n -A no archiving when using file-attribute fl"
411	printf "\n -b batch-job on local machine ---"
412	printf "\n -B do not delete temporary directory at end ---"
413	printf "\n -c configuration file .mrun.config"
414	printf "\n -d base name of files attached to program test"
415	printf "\n -D preprocessor(cpp)-directives \"\" "
416	printf "\n -f filetransfer protocol (ftp or scp) depending on -h"
417	printf "\n -F create remote job file only ---"
418	printf "\n -h execution host $localhost_realname"
419	printf "\n -i INPUT control list \"\" "
420	printf "\n -I archiving errors of previous batch-jobs"
421	printf "\n will be ignored"
422	printf "\n -k keep data from previous run"
423	printf "\n -K additional conditions for controling"
424	printf "\n usage of conditional code and"
425	printf "\n env-variables in configuration file \"\" "
426	printf "\n -m memory demand in MB (batch-jobs) 0 MB"
427	printf "\n -M Makefile name Makefile"
428	printf "\n -n node usage (shared/not_shared) depending on -h"
429	printf "\n -o OUTPUT control list \"\" "
430	printf "\n -O use OpenMP ---"
431	printf "\n -p software package list \"\" "
432	printf "\n -q queue \"$queue\" "
433	printf "\n -r run control list (combines -i -o) \"\" "
434	printf "\n -s filenames of routines to be compiled \"\" "
435	printf "\n must end with .f, .f90, .F, or .c !"
436	printf "\n use \"..\" for more than one file and wildcards"
437	printf "\n -s TEST compiles all files with w-permit"
438	printf "\n -S config file interpreted by shellscript ---"
439	printf "\n -t allowed cpu-time in seconds (batch) 0"
440	printf "\n -T tasks per node depending on -h"
441	printf "\n -u username on remote machine \"\" "
442	printf "\n -v no prompt for confirmation ---"
443	printf "\n -x tracing of mrun for debug purposes ---"
444	printf "\n -X # of processors (on parallel machines) 1"
445	printf "\n "
446	printf "\n Possible values of positional parameter <modus>:"
447	printf "\n \"?\" - this outline \n\n") \| more
448	exit
449	elif [[ "$1" != "" ]]
450	then
451	printf "\n +++ positional parameter $1 unknown \n"
452	locat=parameter; exit
453	fi
454
455
456
457	# KURZE STARTMELDUNG
458	printf "\n*** $version "
459	printf "\n will be executed. Please wait ..."
460
461
462	# BASISNAME DER INPUT-DATEIEN GLEICH ALLGEMEINEM BASISNAMEN SETZEN,
463	# WENN NICHT VOM BENUTZER ANDERS BESTIMMT
464	[[ "$afname" = "" ]] && afname=$fname
465
466
467	# EVTL. RUN-MODUS DEN I/O-LISTEN HINZUFUEGEN
468	if [[ "$run_mode" != "" ]]
469	then
470	input_list="$input_list $run_mode"
471	output_list="$output_list $run_mode"
472	fi
473
474
475	# RECHNERNAMEN ABSPEICHERN, VON DEM AUS JOB GESTARTET WIRD,
476	# ALLERDINGS NUR DANN, WENN NICHT PER OPTION -H BEREITS EIN WERT
477	# ZUGEWIESEN WURDE (MRUN MACHT DIES IMMER, WENN ES SELBST BATCH-JOBS
478	# STARTET)
479	if [[ "$fromhost" = "" ]]
480	then
481	fromhost=$localhost
482	fi
483
484
485	# PRUEFEN, OB MRUN NUR TESTWEISE AUF DER LOKALEN MASCHINE KOMPILIEREN SOLL
486	if [[ "$source_list" = LOCAL_COMPILE_TEST ]]
487	then
488	source_list=TEST
489	local_compile=true
490	host=$localhost
491	fi
492
493
494	# PRUEFEN, OB AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL
495	# WERT VON do_remote WIRD FUER DATEIVERBINDUNGEN BENOETIGT.
496	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
497	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
498	if [[ -n $host && "$host" != $localhost ]]
499	then
500	do_batch=true
501	do_remote=true
502	case $host in
503	(ibm\|ibmb\|ibmh\|ibms\|ibmy\|nech\|neck\|lctit\|unics) true;;
504	(*) printf "\n"
505	printf "\n +++ execution host \"$host\" not admitted for MRUN,"
506	printf "\n or NQS not available on execution host!"
507	locat=nqs; (( iec = 0 )); exit;;
508	esac
509	else
510	host=$localhost
511	fi
512
513
514	# ZUSATZBEDINGUNGEN (OPTION -K) AUSWERTEN
515	if [[ -n $additional_conditions ]]
516	then
517	echo $additional_conditions \| cut -d" " -f1-3 \| read cond1 cond2 dummy
518	# cond1=`echo $additional_conditions \| cut -d" " -f1`
519	# cond2=`echo $additional_conditions \| cut -d" " -s -f2`
520	# dummy=`echo $additional_conditions \| cut -d" " -s -f3`
521	if [[ -n $dummy ]]
522	then
523	printf "\n +++ more than 2 additional conditions given for Option \"-K\""
524	locat=options; exit
525	fi
526	fi
527
528
529	# PRUEFEN, OB EVTL. BEI VORHERGEHENDEM LAUF (KETTENJOB) EINE
530	# ARCHIVIERUNG FEHLGESCHLAGEN IST
531	if [[ -f ~/job_queue/ARCHIVE_ERROR_$fname ]]
532	then
533	if [[ $ignore_archive_error = false ]]
534	then
535	printf "\n +++ data archiving of previous run failed"
536	printf "\n see directory \~/job_queue on remote machine"
537	locat=archive; exit
538	else
539	printf "\n +++ warning: data archiving in a previous run failed"
540	printf "\n MRUN continues, trying to get backup copy"
541	fi
542	fi
543
544
545	# PRUEFEN, OB KONFIGURATIONS-DATEI VORHANDEN
546	if [[ ! -f $config_file ]]
547	then
548	printf "\n\n +++ configuration file: "
549	printf "\n $config_file"
550	printf "\n does not exist"
551	locat=connect; exit
552	fi
553
554
555
556	# LESEN UND INTERPRETIEREN DER KONFIGURATIONS-DATEI VOM SHELLSCRIPT AUS
557	# VORUEBERGEHEND ZWINGEND AUF LINUX-RECHNERN
558	if [[ "$read_from_config" = false ]]
559	then
560
561	[[ $silent = false ]] && printf "\n Reading the configuration file... "
562	while read zeile
563	do
564	[[ $silent = false ]] && printf "."
565
566
567	# ZUERST EVENTUELL VORKOMMENDE ENVIRONMENT-VARIABLEN DURCH IHRE WERTE
568	# ERSETZEN
569	eval zeile=\"$zeile\"
570
571
572	# INTERPRETATION DER ZEILE
573	if [[ "$(echo $zeile \| cut -c1)" = "#" ]]
574	then
575
576	# ZEILE IST KOMMENTARZEILE
577	true
578
579	elif [[ "$(echo $zeile \| cut -c1)" = "%" ]]
580	then
581
582	# ZEILE DEFINIERT ENVIRONMENT-VARIABLE
583	zeile=$(echo $zeile \| cut -c2-)
584	echo $zeile \| cut -d" " -f1-5 \| read var value for_host for_cond1 for_cond2
585	# var=`echo $zeile \| cut -d" " -f1`
586	# value=`echo $zeile \| cut -d" " -s -f2`
587	# for_host=`echo $zeile \| cut -d" " -s -f3`
588	# for_cond1=`echo $zeile \| cut -d" " -s -f4`
589	# for_cond2=`echo $zeile \| cut -d" " -s -f5`
590
591	if [[ "$for_host" = "" \|\| ( "$for_host" = $host && "$for_cond1" = "$cond1" && "$for_cond2" = "$cond2" ) \|\| $(echo "$input_list$output_list"\|grep -c "$for_host") != 0 ]]
592	then
593
594	# BEI COMPILER- CPP- ODER LINKEROPTIONEN EVTL ":" DURCH " "
595	# ERSETZEN. "::" WIRD DURCH ":" ERSETZT.
596	value=`echo $value \| sed 's/::/%DUM%/g' \| sed 's/:/ /g' \| sed 's/%DUM%/:/g'`
597
598
599	# ENVIRONMENT-VARIABLE WIRD WERT AUS KONFIGURATIONSDATEI
600	# ZUGEWIESEN, WENN SIE SELBST NOCH KEINEN WERT UEBER DIE
601	# ENTSPRECHENDE SCRIPT-OPTION ERHALTEN HAT. SOLCHE
602	# VARIABLEN HAETTEN DANN DEN WERT "" ODER IM INTEGER-FALL DEN
603	# WERT 0. ALLGEMEINE REGEL ALSO: SCRIPT-OPTION GEHT UEBER
604	# KONFIGURATIONSDATEI
605	if [[ "$(eval echo \$$var)" = "" \|\| "$(eval echo \$$var)" = "0" ]]
606	then
607	eval $var=\$value
608
609	# EVTL. BILDSCHIRMAUSGABEN DER ENVIRONMENT-VARIABLEN
610	if [[ $do_trace = true ]]
611	then
612	printf "\n*** ENVIRONMENT-VARIABLE $var = $value"
613	fi
614	fi
615
616	# WENN ENVIRONMENT-VARIABLE HOST VEREINBART, DANN SOFORT AUSWERTEN
617	# WERT VON do-remote WIRD BEI DATEIVERBINDUNGEN BENOETIGT
618	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
619	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
620	if [[ $var = host ]]
621	then
622	if [[ -n $host && "$host" != $localhost ]]
623	then
624	do_batch=true
625	do_remote=true
626	case $host in
627	(ibm\|ibms\|ibmy\|lctit\|nech\|neck\|unics) true;;
628	(*) printf "\n +++ no queueing system available on execution host \"$host\""
629	locat=nqs; exit;;
630	esac
631	else
632	host=$localhost
633	fi
634	fi
635
636	# VOM BENUTZER DEFINIERTE ENVIRONMENT VARIABLEN MUESSEN PRINZIPIELL
637	# EXPORTIERT WERDEN, DA SIE VIELLEICHT IN WEITER UNTEN AUFZURUFEN-
638	# DEN PROGRAMMEN BENOETIGT WERDEN
639	export $var
640	fi
641
642
643
644
645	elif [[ "$(echo $zeile \| cut -c1-3)" = "EC:" ]]
646	then
647
648	# ZEILE DEFINIERT ERROR-KOMMANDO
649	(( iec = iec + 1 ))
650	zeile=$(echo $zeile \| cut -c4-)
651	err_command[$iec]="$zeile"
652
653	elif [[ "$(echo $zeile \| cut -c1-3)" = "IC:" ]]
654	then
655
656	# ZEILE DEFINIERT INPUT-KOMMANDO
657	(( iic = iic + 1 ))
658	zeile=$(echo $zeile \| cut -c4-)
659	in_command[$iic]="$zeile"
660
661	elif [[ "$(echo $zeile \| cut -c1-3)" = "OC:" ]]
662	then
663
664	# ZEILE DEFINIERT OUTPUT-KOMMANDO
665	(( ioc = ioc + 1 ))
666	zeile=$(echo $zeile \| cut -c4-)
667	out_command[$ioc]="$zeile"
668
669	else
670
671	# ZEILE DEFINIERT DATEIVERBINDUNG. EINLESEN DER DATEIEIGENSCHAFTEN
672	# s2a: in/out - Feld
673	# s2b: loc - Feld (optional)
674	# s2c: tr/ar - Feld (optional)
675	echo $zeile \| cut -d" " -f1-2 \| read s1 s2
676	# s1=`echo $zeile \| cut -d" " -f1`
677	# s2=`echo $zeile \| cut -d" " -s -f2`
678	s2a=$(echo $s2 \| cut -d":" -f1)
679	if [[ $(echo $s2 \| grep -c ":") = 0 ]]
680	then
681	s2b=""
682	s2c=""
683	else
684	echo $s2 \| cut -d":" -f2-3 \| sed 's/:/ /g' \| read s2b s2c
685	# s2b=`echo $s2 \| cut -d":" -f2 \| sed 's/:/ /g'`
686	# s2c=`echo $s2 \| cut -d":" -s -f3 \| sed 's/:/ /g'`
687	fi
688	echo $zeile \| cut -d" " -f3-6 \| read s3 s4 s5 s6
689	# s3=`echo $zeile \| cut -d" " -f3`
690	# s4=`echo $zeile \| cut -d" " -s -f4`
691	# s5=`echo $zeile \| cut -d" " -s -f5`
692	# s6=`echo $zeile \| cut -d" " -s -f6`
693
694
695	# ABSPEICHERN DER DATEIVERBINDUNG, FALLS IN INPUT- ODER OUTPUT-LIST
696	# VERMERKT. VARIABLE S3 KANN AUCH LISTE ENTHALTEN (FELDTRENNER ":")
697	# DATEIVERBINDUNG WIRD DANN NICHT ABGESPEICHERT UND GEPRUEFT, WENN
698	# PROGRAMMLAUF AUF REMOTE-MASCHINE ERFOLGT UND DATEI NUR LOKAL VOR-
699	# HANDEN SEIN MUSS (D.H. s2b = loc)
700	IFSALT="$IFS"; IFS="$IFS:"
701	if [[ "$s2a" = in && ! ( $do_remote = true && ( "$s2b" = loc \|\| "$s2b" = locopt ) ) ]]
702	then
703	found=false
704	for actual in $input_list
705	do
706	for formal in $s3
707	do
708	[[ $actual = $formal \|\| "$formal" = "-" ]] && found=true
709	done
710	done
711	if [[ $found = true ]]
712	then
713	(( iin = iin + 1 ))
714	localin[$iin]=$s1; transin[$iin]=$s2b; actionin[$iin]=$s2c;
715	typein[$iin]=$s3; pathin[$iin]=$s4; endin[$iin]=$s5;
716	extin[$iin]=$s6
717	fi
718	elif [[ "$s2a" = out && ! ( $do_remote = true && "$s2b" = loc ) ]]
719	then
720	found=false
721	for actual in $output_list
722	do
723	for formal in $s3
724	do
725	[[ $actual = $formal \|\| "$formal" = "-" ]] && found=true
726	done
727	done
728	if [[ $found = true ]]
729	then
730	(( iout = iout + 1 ))
731	localout[$iout]=$s1; actionout[$iout]=$s2c; typeout[$iout]=$s3;
732	pathout[$iout]=$s4; endout[$iout]=$s5; extout[$iout]=$s6
733	fi
734	elif [[ "$s2a" != in && "$s2a" != out ]]
735	then
736	printf "\n +++ I/O-attribute in configuration file $config_file has the invalid"
737	printf "\n value \"$s2\". Only \"in\" and \"out\" are allowed!"
738	locat=connect; exit
739	fi
740	IFS="$IFSALT"
741	fi
742	done < $config_file
743
744	else
745
746
747	# INTERPRETATION DER KONFIGURATIONSDATEI MITTELS FORTRAN 90 - PROGRAMM
748	[[ $silent = false ]] && printf "..."
749	export cond1 cond2 config_file do_remote do_trace input_list localhost output_list
750	export interpreted_config_file=.icf.$RANDOM
751
752	case $localhost_realname in
753	(caurus\|twister) interpret_config.hp;;
754	(bora\|breva\|elephanta\|gallego\|gregale\|hababai\|maestro\|orkan\|ostria) export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/muksoft/packages/intel_ifc/8.1/lib/; interpret_config_9.x;;
755	(levanto\|vorias) export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/muksoft/packages/intel/ifort/9.1.037/lib/; interpret_config_9.x_levanto;;
756	(quanero) export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/opt/intel_fc_80/lib; interpret_config_9.x;;
757	(*) interpret_config.x;;
758	esac
759
760
761	# AUSFUEHRUNG DER GENERIERTEN SHELL-KOMMANDOS IN DIESER SHELL
762	chmod u+x $interpreted_config_file
763	export PATH=$PATH:.
764	. $interpreted_config_file
765	rm $interpreted_config_file
766
767	fi
768
769
770	# QUELLTEXTVERZEICHNIS AUF LOKALER MASCHINE AUS KONFIGURATIONSDATEI
771	# BESTIMMEN (WUERDE SONST EVTL. DAS VERZEICHNIS DES JEWEILS UNTER -h
772	# ANGEGEBENEN REMOTE-RECHNERS SEIN)
773	# BEI BATCH-JOBS SIND DIE ZU UEBERSETZENDEN PROGRAMMTEILE SCHON KOMPLETT
774	if [[ "$SOURCES_COMPLETE" = "" ]]
775	then
776
777	# ZUERST PRUEFEN, OB EIN GLOBALER QUELLTEXTPFAD FUER ALLE RECHNER
778	# VEREINBART WURDE
779	source_path=""
780	line=""
781	grep "%source_path" $config_file > tmp_mrun
782	while read line
783	do
784	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
785	then
786	if [[ "$(echo $line \| cut -d" " -f3)" = "" ]]
787	then
788	global_source_path=`echo $line \| cut -d" " -f2`
789	fi
790	fi
791	done < tmp_mrun
792
793	line=""
794	found=false
795	grep " $localhost" $config_file \| grep "%source_path" > tmp_mrun
796	while read line
797	do
798	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
799	then
800	if [[ $found = true ]]
801	then
802	printf "\n\n +++ more than one source path found in configuration file"
803	printf "\n for local host \"$localhost\" "
804	locat=source_path; exit
805	fi
806	source_path=`echo $line \| cut -d" " -f2`
807	found=true
808	fi
809	done < tmp_mrun
810	rm tmp_mrun
811
812	if [[ "$source_path" = "" ]]
813	then
814	if [[ "$global_source_path" != "" ]]
815	then
816	source_path=$global_source_path
817	else
818	printf "\n\n +++ no source path found in configuration file"
819	printf "\n for local host \"$localhost\" "
820	locat=source_path; exit
821	fi
822	fi
823	eval source_path=$source_path
824
825	if [[ ! -d $source_path ]]
826	then
827	printf "\n\n +++ source path \"$source_path\" on local host"
828	printf "\n \"$localhost\" does not exist"
829	locat=source_path; exit
830	fi
831
832	fi
833
834
835
836	# NOCHMAL PRUEFEN, OB AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL
837	# (HOST KANN IN KONFIGURATIONSDATEI ANDERS FESTGELEGT WORDEN SEIN)
838	# WERT VON do_remote WIRD FUER DATEIVERBINDUNGEN BENOETIGT.
839	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
840	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
841	if [[ -n $host && "$host" != $localhost ]]
842	then
843	do_batch=true
844	do_remote=true
845	case $host in
846	(ibm\|ibmb\|ibmh\|ibms\|ibmy\|lctit\|nech\|neck\|unics) true;;
847	(*) printf "\n"
848	printf "\n +++ execution host \"$host\" not admitted for MRUN,"
849	printf "\n or no queueing system available on execution host!"
850	locat=nqs; (( iec = 0 )); exit;;
851	esac
852	else
853	host=$localhost
854	fi
855
856
857	# PRUEFUNG EINIGER PROZESSORZAHLANGABEN BEI RECHNUNGEN AUF PARALLELRECHNERN
858	if [[ "$cond1" = parallel \|\| "$cond2" = parallel ]]
859	then
860
861	# PRUEFEN, OB DIE ANZAHL DER ZU VERWENDENDEN PES ANGEGEBEN WURDE
862	if [[ ! -n $numprocs ]]
863	then
864	printf "\n"
865	printf "\n +++ option \"-K parallel\" requires additional specification"
866	printf "\n of the number of processors to be used by"
867	printf "\n mrun-option \"-X\" or by environment-variable"
868	printf "\n \"numprocs\" in the configuration file"
869	locat=numprocs; (( iec = 0 )); exit
870	fi
871
872	# PRUEFEN, OB DIE PROZESSORANZAHL PRO KNOTEN ANGEGEBEN WURDE (GGF.
873	# DEFAULT-WERT SETZEN) UND OB SIE EIN GANZZAHLIGER TEILER DER
874	# GESAMTPROZESSORANZAHL IST
875	if [[ $host = nech \|\| $host = neck \|\| $host = ibmh \|\| $host = ibmb \|\| $host = ibms ]]
876	then
877	[[ "$tasks_per_node" = "" ]] && tasks_per_node=6
878	(( ival = $tasks_per_node ))
879	(( pes = numprocs ))
880	# if [[ $(echo $package_list \| grep -c dvrp_graphics+1PE) = 1 ]]
881	# then
882	# (( pes = pes - 1 ))
883	# fi
884	(( ii = pes / ival ))
885	if (( pes - ii * ival > 0 ))
886	then
887	printf "\n"
888	printf "\n +++ tasks per node (option \"-T\") must be an integral"
889	printf "\n divisor of the total number of processors (option \"-X\")"
890	printf "\n values of this mrun-call: \"-T $tasks_per_node\" \"-X $numprocs\""
891	locat=tasks_per_node; (( iec = 0 )); exit
892	fi
893	fi
894
895	# IBMY HAT NUR EINEN KNOTEN
896	if [[ $host = ibmy ]]
897	then
898	if [[ "$tasks_per_node" != "" && "$tasks_per_node" != "$numprocs" ]]
899	then
900	printf "\n"
901	printf "\n +++ on ibmy, tasks per node (option \"-T\") must be equal to the"
902	printf "\n total number of processors (option \"-X\")"
903	printf "\n values of this mrun-call: \"-T $tasks_per_node\" \"-X $numprocs\""
904	locat=tasks_per_node; (( iec = 0 )); exit
905	fi
906	fi
907
908	# FALLS OPENMP PARALLELISIERUNG VERWENDET WERDEN SOLL, ANZAHL VON THREADS
909	# SETZEN UND ZAHL DER TASKS PRO KNOTEN AUF 1 SETZEN
910	if [[ $use_openmp = true ]]
911	then
912	threads_per_task=$tasks_per_node
913	tasks_per_node=1
914	fi
915	OOPT="-O $threads_per_task"
916	TOPT="-T $tasks_per_node"
917
918	# GESAMTZAHL DER KNOTEN BESTIMMEN
919	if [[ "$tasks_per_node" != "" ]]
920	then
921	(( nodes = numprocs / ( tasks_per_node * threads_per_task ) ))
922	fi
923
924	# PRUEFEN, OB NODE USAGE EINEN ERLAUBTEN WERT HAT BZW. DEN DEFAULT
925	# SETZEN
926	if [[ $node_usage = default ]]
927	then
928	if [[ $host = ibms ]]
929	then
930	node_usage=shared
931	else
932	node_usage=not_shared
933	fi
934	fi
935	if [[ $node_usage != shared && $node_usage != not_shared ]]
936	then
937	printf "\n"
938	printf "\n +++ node usage (option \"-n\") is only allowed to be set"
939	printf "\n \"shared\" or \"not_shared\""
940	locat=tasks_per_node; (( iec = 0 )); exit
941	fi
942
943	fi
944
945	# PRUEFEN, OB HOSTFILE EXISTIERT
946	if [[ -n $hostfile ]]
947	then
948	if [[ ! -f $hostfile ]]
949	then
950	printf "\n"
951	printf "\n +++ hostfile \"$hostfile\" does not exist"
952	locat=hostfile; exit
953	fi
954	fi
955
956	# PRUEFEN, OB RHOSTS DATEI EXISTIERT. GEGEBENENFALLS ANLEGEN BZW. ERWEITERN
957	if [[ $host = ibmy && $do_remote = false ]]
958	then
959	if [[ ! -f $HOME/.rhosts ]]
960	then
961	echo "gfdl5.yonsei.ac.kr" > $HOME/.rhosts
962	printf "\n\n *** file:"
963	printf "\n $HOME/.rhosts"
964	printf "\n was created\n"
965	fi
966	if [[ $(grep -c gfdl5.yonsei.ac.kr $HOME/.rhosts) = 0 ]]
967	then
968	echo "gfdl5.yonsei.ac.kr" >> $HOME/.rhosts
969	printf "\n\n *** file:"
970	printf "\n $HOME/.rhosts"
971	printf "\n was extended by the name of the current host\n"
972	fi
973	fi
974
975	# DEFAULT-DATEITRANSFER-PROTOKOLL FESTLEGEN
976	if [[ "$filetransfer_protocol" = "" ]]
977	then
978	case $host in
979	(nech\|neck\|ibm\|ibmb\|ibmh\|ibms\|ibmy\|lctit) filetransfer_protocol=scp;;
980	(*) filetransfer_protocol=ftp;;
981	esac
982	fi
983
984	# PRUEFEN, OB ZULAESSIGES DATEITRANSFER-PROTOKOLL GEWAEHLT WURDE
985	if [[ "$filetransfer_protocol" != ftp && "$filetransfer_protocol" != scp ]]
986	then
987	printf "\n"
988	printf "\n +++ illegal value \"$filetransfer_protocol\" for Option -f"
989	printf "\n only \"ftp\" or \"scp\" are allowed"
990	locat=options; exit
991	fi
992
993
994	# FALLS NICHT VORGEGEBEN, DEFAULT-QUEUE AUF DER ZIELMASCHINE FESTLEGEN
995	if [[ $queue = none ]]
996	then
997	case $host in
998	(ibmb) if [[ $node_usage = shared ]]
999	then
1000	queue=cshare
1001	else
1002	queue=csolo
1003	fi;;
1004	(ibmh) if [[ $node_usage = shared ]]
1005	then
1006	queue=cshare
1007	else
1008	queue=csolo
1009	fi;;
1010	(ibmy) queue=parallel;;
1011	(lctit) queue=default;;
1012	(nech) queue=none;;
1013	(neck) queue=P;;
1014	(unics) queue=unics;;
1015	esac
1016	fi
1017
1018
1019	# EVTL. NETCDF-UNTERSTUETZUNG SETZEN
1020	case $host in
1021	(decalpha) netcdf_support=true
1022	netcdf_path=/usr/local/netcdf-3.5.1;;
1023	(ibmb\|ibmh) netcdf_support=true
1024	netcdf_path=/aws/dataformats/netcdf-3.6.0-p1/64-32;;
1025	(ibms) netcdf_support=true
1026	netcdf_path=/applic/lib/NETCDF64;;
1027	(ibmy) netcdf_support=true
1028	netcdf_path=/usr1/users/raasch/pub/netcdf-3.6.0-p1;;
1029	(lcmuk) netcdf_support=true
1030	if [[ $scirocco = true ]]
1031	then
1032	netcdf_path=/opt/netcdf/3.6.2-beta4
1033	else
1034	netcdf_path=/muksoft/packages/netcdf/linux
1035	fi;;
1036	(lctit) netcdf_support=true
1037	netcdf_path=/home2/usr5/mkanda/netcdf-3.6.1;;
1038	(nech) netcdf_support=true
1039	netcdf_path=/pool/SX-6/netcdf/netcdf-3.6.0-p1;;
1040	(neck) netcdf_support=true
1041	netcdf_path=/home/DSRC/NC/tatuyama/pub/netcdf-3.6.0-p1;;
1042	esac
1043
1044
1045	# VOLLSTAENDIGE DATEINAMEN DER INPUT-FILES BILDEN,
1046	# INPUT-DATEIEN AUF VORHANDENSEIN PRUEFEN UND EVTL. HOECHSTE ZYKLUSNUMMER
1047	# ERMITTELN
1048	(( i = 0 ))
1049	while (( i < iin ))
1050	do
1051	(( i = i + 1 ))
1052	(( maxcycle = 0 ))
1053
1054	# NAMENSBILDUNG (EVTL. IST FESTER DATEINAME VORGEGEBEN)
1055	if [[ "${actionin[$i]}" = di ]]
1056	then
1057	remotepathin[$i]=${pathin[$i]}/${endin[$i]} # REMOTE-PFAD ERST AUF
1058	# REM-MASCHINE AUSWERTEN
1059	eval filename=${pathin[$i]}/${endin[$i]}
1060	else
1061	remotepathin[$i]=${pathin[$i]}/${afname}${endin[$i]} # REMOTE-PFAD ERST AUF
1062	# REM-MASCHINE AUSWERTEN
1063	eval filename=${pathin[$i]}/${afname}${endin[$i]}
1064	fi
1065
1066	# PRUEFEN AUF VORHANDENSEIN
1067	if [[ $(ls $filename* 2>&1 \| grep -c "not found") = 1 \|\| \
1068	$(ls $filename* 2>&1 \| grep -c "No such file") = 1 \|\| \
1069	$(ls $filename* 2>&1 \| grep -c "does not exist") = 1 ]]
1070	then
1071	# DATEIEN MIT EXTENSION (Z.B. NC) MUESSEN NICHT ZWINGEND VORHANDEN
1072	# SEIN, DESHALB IN SOLCHEN FAELLEN KEIN ABBRUCH. DIES IST NUR EINE
1073	# VORUEBERGEHENDE LOESUNG (OKT 05). NICHT ZWINGEND BENOETIGTE
1074	# EINGABEDATEIEN SOLLTEN EINE SPEZIELLE OPTION IN DER DATEI-
1075	# VERBINDUNGSANWEISUNG BEKOMMEN (Z.B. inopt?)
1076	if [[ "${transin[$i]}" != "locopt" ]]
1077	then
1078	printf "\n\n +++ INPUT-file: "
1079	if [[ "${extin[$i]}" = "" ]]
1080	then
1081	printf "\n $filename"
1082	else
1083	printf "\n $filename.${extin[$i]}"
1084	fi
1085	printf "\n does not exist\n"
1086	locat=input; exit
1087	else
1088	transin[$i]="unavailable"
1089	fi
1090	else
1091
1092	# ZYKLUSNUMMER FESTSTELLEN
1093	ls -1 -d $filename > filelist 2>/dev/null
1094	ls -1 -d $filename.* >> filelist 2>/dev/null
1095	while read zeile
1096	do
1097	cycle=$(print $zeile \| cut -f2 -d".")
1098	if [[ "$cycle" = "$zeile" ]]
1099	then
1100	(( icycle = 0 ))
1101	elif [[ "$cycle" = "${extin[$i]}" ]]
1102	then
1103	(( icycle = 0 ))
1104	else
1105	(( icycle = $cycle ))
1106	fi
1107	if (( icycle > maxcycle ))
1108	then
1109	(( maxcycle = icycle ))
1110	file_to_be_used=$zeile
1111	fi
1112	done <filelist
1113	rm filelist
1114
1115	# EVTL. ZYKLUSNUMMER AN DATEINAMEN ANFUEGEN
1116	if (( maxcycle > 0 ))
1117	then
1118	if [[ "${extin[$i]}" != " " && "${extin[$i]}" != "" ]]
1119	then
1120	filename=${filename}.$maxcycle.${extin[$i]}
1121	else
1122	filename=${filename}.$maxcycle
1123	fi
1124	else
1125	if [[ "${extin[$i]}" != " " && "${extin[$i]}" != "" ]]
1126	then
1127	filename=${filename}.${extin[$i]}
1128	fi
1129	fi
1130
1131	# DATEINAMEN OHNE PFAD ABER MIT ZYKLUSNUMMER ABSPEICHERN,
1132	# DA SPAETER BEI RUECKSPEICHERN VOM ARCHIVSYSTEM EVTL. BENOETIGT
1133	absnamein[$i]=$filename
1134	if (( maxcycle > 0 ))
1135	then
1136	if [[ "${actionin[$i]}" = di ]]
1137	then
1138	frelin[$i]=${endin[$i]}.$maxcycle
1139	else
1140	frelin[$i]=${afname}${endin[$i]}.$maxcycle
1141	fi
1142	else
1143	if [[ "${actionin[$i]}" = di ]]
1144	then
1145	frelin[$i]=${endin[$i]}
1146	else
1147	frelin[$i]=${afname}${endin[$i]}
1148	fi
1149	fi
1150
1151	fi
1152	done
1153
1154
1155	# VOLLSTAENDIGE DATEINAMEN (OHNE $ ODER ~) DER OUTPUT-FILES BILDEN,
1156	# OUTPUT-DATEIEN AUF VORHANDENSEIN PRUEFEN UND EVTL. HOECHSTE ZYKLUSNUMMER
1157	# ERMITTELN ODER, FALLS NICHT VORHANDEN, PRUEFEN, OB SIE SICH ANLEGEN LASSEN
1158	# DIESE AKTIONEN FINDEN NICHT STATT, WENN PROGRAMM AUF REMOTE-MASCHINE
1159	# RECHNET UND DATEI ANSCHLIESSEND TRANSFERIERT WERDEN SOLL!
1160	(( i = 0 ))
1161	while (( i < iout ))
1162	do
1163	(( i = i + 1 ))
1164	if [[ ! ( $fromhost != $localhost && ( "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = tra \|\| "${actionout[$i]}" = trpe ) ) ]]
1165	then
1166	if [[ "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = trpe ]]
1167	then
1168	actionout[$i]=""
1169	elif [[ "${actionout[$i]}" = tra ]]
1170	then
1171	actionout[$i]=a
1172	fi
1173	(( maxcycle = 0 ))
1174	eval filename=${pathout[$i]}/${fname}${endout[$i]}
1175	eval catalogname=${pathout[$i]}
1176	if [[ $(ls $filename* 2>&1 \| grep -c "not found") = 1 \|\| \
1177	$(ls $filename* 2>&1 \| grep -c "No such file") = 1 \|\| \
1178	$(ls $filename* 2>&1 \| grep -c "does not exist") = 1 ]]
1179	then
1180
1181	# OUTPUT-DATEI NICHT VORHANDEN. PRUEFEN, OB ANLEGEN MOEGLICH.
1182	if cat /dev/null > $filename
1183	then
1184	rm $filename
1185	else
1186
1187	# PRUEFEN, OB KATALOG VORHANDEN UND EVTL. DIESEN ANLEGEN
1188	if [[ ! -d $catalogname ]]
1189	then
1190	if mkdir -p $catalogname
1191	then
1192	printf "\n\n *** directory:"
1193	printf "\n $catalogname"
1194	printf "\n was created\n"
1195	else
1196	printf "\n\n +++ OUTPUT-file:"
1197	printf "\n $filename"
1198	printf "\n cannot be created, because directory does not exist"
1199	printf "\n and cannot be created either"
1200	printf "\n"
1201	locat=output ; exit
1202	fi 2>/dev/null
1203	else
1204	printf "\n\n +++ OUTPUT-file:"
1205	printf "\n $filename"
1206	printf "\n cannot be created, although directory exists"
1207	printf "\n"
1208	locat=output ; exit
1209	fi
1210	fi 2>/dev/null
1211	else
1212
1213	# ZYKLUSNUMMER FESTSTELLEN
1214	ls -1 -d $filename > filelist 2>/dev/null
1215	ls -1 -d $filename.* >> filelist 2>/dev/null
1216	while read zeile
1217	do
1218	cycle=$(print $zeile \| cut -f2 -d".")
1219	if [[ "$cycle" = "$zeile" \|\| "$cycle" = ${extout[$i]} ]]
1220	then
1221	(( icycle = 1 ))
1222	else
1223	(( icycle = $cycle + 1 ))
1224	fi
1225	if (( icycle > maxcycle ))
1226	then
1227	(( maxcycle = icycle ))
1228	fi
1229	done <filelist
1230	rm filelist
1231	fi
1232
1233	# EVTL. ZYKLUSNUMMER AN DATEINAMEN ANFUEGEN UND PRUEFEN, OB SICH
1234	# DATEI AUCH WIRKLICH ANLEGEN LAESST. IM APPEND-FALL MUSS AN DEN
1235	# HOECHSTEN VORHANDENEN ZYKLUS-ANGEHAENGT WERDEN. ANLAGEPRUEFUNG
1236	# IST DANN NATUERLICH NICHT ZULAESSIG BZW. MOEGLICH
1237	if [[ "${actionout[$i]}" != a ]]
1238	then
1239	if (( maxcycle > 0 ))
1240	then
1241	filename=${filename}.$maxcycle
1242	if cat /dev/null > $filename
1243	then
1244	rm $filename
1245	else
1246	printf "\n +++ OUTPUT-file:"
1247	printf "\n $filename"
1248	printf "\n cannot be created"
1249	locat=output ; exit
1250	fi
1251	fi
1252	else
1253	(( maxcycle = maxcycle - 1 ))
1254	if (( maxcycle > 0 ))
1255	then
1256	filename=${filename}.$maxcycle
1257	fi
1258	fi
1259
1260	# DATEINAMEN OHNE PFAD ABER MIT ZYKLUSNUMMER ABSPEICHERN,
1261	# DA SPAETER BEI ABLAGE AUF ARCHIVSYSTEM BZW. FUER
1262	# DATEI OUTPUT_FILE_CONNECTIONS EVTL. BENOETIGT
1263	pathout[$i]=$filename
1264	if (( maxcycle > 0 ))
1265	then
1266	frelout[$i]=${fname}${endout[$i]}.$maxcycle
1267	else
1268	frelout[$i]=${fname}${endout[$i]}
1269	fi
1270
1271	fi
1272	done
1273
1274
1275	# PRUEFEN, OB ENTWEDER HAUPTPROGRAMM ODER NUR EIN AUSFUEHRBARES
1276	# PROGRAMM VEREINBART WURDE (IN DIESEM FALL BRAUCHT IM WEITEREN NICHT
1277	# UEBERSETZT ZU WERDEN)
1278	if [[ "$mainprog" = "" && "$executable" = "" ]]
1279	then
1280	printf "\n +++ neither main program nor executable defined"
1281	locat=source; exit
1282	elif [[ "$mainprog" != "" && "$executable" != "" ]]
1283	then
1284	printf "\n +++ main program as well as executable defined"
1285	locat=source; exit
1286	elif [[ "$mainprog" = "" && "$executable" != "" ]]
1287	then
1288	do_compile=false
1289	fi
1290
1291
1292	# ALLE ZU UEBERSETZENDEN PROGRAMMTEILE ZUSAMMENSAMMELN
1293	# BEI BATCH-JOBS IST DIES NICHT NOETIG, WEIL DIE PROGRAMMTEILE BEREITS DURCH
1294	# DEN MRUN-AUFRUF ERMITTELT SIND, DER DEN BATCH-JOB GENERIERT HAT, UND
1295	# IM VERZEICHNIS SOURCES_FOR_RUN_... ABGELEGT SIND
1296	if [[ $do_compile = true && "$SOURCES_COMPLETE" = "" ]]
1297	then
1298
1299	[[ "$source_list" = LM ]] && source_list=LOCALLY_MODIFIED
1300	[[ "$source_list" = WP ]] && source_list=WRITE_PERMIT
1301
1302	if [[ $restart_run != true ]]
1303	then
1304	rm -rf SOURCES_FOR_RUN_$fname
1305	mkdir SOURCES_FOR_RUN_$fname
1306	fi
1307
1308
1309	# EVTL. ZU UEBERSETZENDE PROGRAMMTEILE DADURCH BESTIMMEN, DASS GEPRUEFT
1310	# WIRD, WELCHE DATEIEN WRITE-PERMIT BESITZEN (DATEIEN SOLLTEN DESHALB
1311	# UNTER RCS-KONTROLLE STEHEN). MIT DER VARIABLEN EXCLUDE KOENNEN
1312	# BESTIMMTE DATEIEN GRUNDSAETZLICH VON DER UEBERSETZUNG AUSGESCHLOSSEN
1313	# WERDEN. DIES IST NUR BEI MANUELLEM START VON MRUN DURCH DEN BENUTZER
1314	# MOEGLICH, DA BEI AUTOMATISCHEN RESTARTS TEST DURCH DIE TATSAECHLICH
1315	# ZU UBERSETZENDEN DATEIEN ERSETZT IST.
1316	# ALLE ERMITTELTEN DATEIEN WERDEN IM VERZEICHNIS SOURCES_FOR_RUN_...
1317	# GESAMMELT
1318	if [[ "$source_list" = WRITE_PERMIT ]]
1319	then
1320
1321	source_list=""
1322	cd $source_path
1323
1324
1325	# ALLE MOEGLICHEN QUELLCODEDATEIEN AUFLISTEN
1326	Names=$(ls -1 *.f90 2>&1)
1327	[[ $(echo $Names \| grep -c '*.f90') = 0 ]] && Filenames="$Names"
1328	Names=$(ls -1 *.F90 2>&1)
1329	[[ $(echo $Names \| grep -c '*.F90') = 0 ]] && Filenames="$Filenames $Names"
1330	Names=$(ls -1 *.F 2>&1)
1331	[[ $(echo $Names \| grep -c '*.F') = 0 ]] && Filenames="$Filenames $Names"
1332	Names=$(ls -1 *.f 2>&1)
1333	[[ $(echo $Names \| grep -c '*.f') = 0 ]] && Filenames="$Filenames $Names"
1334	Names=$(ls -1 *.c 2>&1)
1335	[[ $(echo $Names \| grep -c '*.c') = 0 ]] && Filenames="$Filenames $Names"
1336
1337
1338	# DATEIEN MIT WRITE-PERMIT NACH SOURCES_FOR_RUN_... KOPIEREN
1339	for dateiname in $Filenames
1340	do
1341	if [[ -w $dateiname ]]
1342	then
1343	if [[ "$exclude" = "" \|\| $(echo $exclude \| grep -c $dateiname) = 0 ]]
1344	then
1345	cp $dateiname $working_directory/SOURCES_FOR_RUN_$fname
1346	source_list=$source_list"$dateiname "
1347	fi
1348	fi
1349	done
1350
1351	cd - > /dev/null
1352
1353
1354	elif [[ "$source_list" = LOCALLY_MODIFIED ]]
1355	then
1356
1357	# MODIFIZIERTE DATEIEN DER SVN-ARBEITSKOPIE BESTIMMEN
1358	source_list=""
1359	cd $source_path
1360
1361
1362	# PRUEFEN, OB VERZEICHNIS UEBERHAUPT UNTER SVN-KONTROLLE STEHT
1363	if [[ ! -d .svn ]]
1364	then
1365	printf "\n\n +++ source directory"
1366	printf "\n \"$source_path\" "
1367	printf "\n is not under control of \"subversion\"."
1368	printf "\n Please do not use mrun-option \"-s LOCALLY MODIFIED\"\n"
1369	fi
1370
1371
1372	# ALLE MODIFIZIERTEN QUELLCODEDATEIEN AUFLISTEN
1373	Filenames=""
1374	svn status \| while read line
1375	do
1376	firstc=`echo $line \| cut -c1`
1377	if [[ $firstc = M \|\| $firstc = "?" ]]
1378	then
1379	Name=`echo "$line" \| cut -c8-`
1380	extension=`echo $Name \| cut -d. -f2`
1381	if [[ "$extension" = f90 \|\| "$extension" = F90 \|\| "$extension" = f \|\| "$extension" = F \|\| "$extension" = c ]]
1382	then
1383	Filenames="$Filenames "$Name
1384	fi
1385	fi
1386	done
1387
1388
1389	# DATEIEN NACH SOURCES_FOR_RUN_... KOPIEREN
1390	for dateiname in $Filenames
1391	do
1392	cp $dateiname $working_directory/SOURCES_FOR_RUN_$fname
1393	source_list=$source_list"$dateiname "
1394	done
1395
1396	cd - > /dev/null
1397
1398
1399	# MITTELS OPTION -s ANGEGEBENE DATEIEN NACH SOURCES_FOR_RUN_... KOPIEREN
1400	# BEI AUTOMATISCHEN FORTSETZUNGSLAEUFEN SIND DORT SCHON ALLE DATEIEN
1401	# VORHANDEN
1402	elif [[ "$source_list" != "" && $restart_run != true ]]
1403	then
1404
1405	cd $source_path
1406
1407	for filename in $source_list
1408	do
1409
1410	# QUELLTEXT-DATEI DARF KEINE PFADE BEINHALTEN
1411	if [[ $(print $filename \| grep -c "/") != 0 ]]
1412	then
1413	printf "\n +++ source code file: $filename"
1414	printf "\n must not contain (\"/\") "
1415	locat=source; exit
1416	fi
1417
1418	if [[ ! -f $filename ]]
1419	then
1420	printf "\n +++ source code file: $filename"
1421	printf "\n does not exist"
1422	locat=source; exit
1423	else
1424	cp $filename $working_directory/SOURCES_FOR_RUN_$fname
1425	fi
1426
1427	done
1428
1429	cd - > /dev/null
1430
1431	fi
1432
1433
1434	# PRUEFEN, OB ENTWEDER HAUPTPROGRAMM VORHANDEN UND ES EVTL. IN DER
1435	# LISTE DER ZU UEBERSETZENDEN PROGRAMMTEILE MIT ENTHALTEN IST (WENN
1436	# NICHT, WIRD ES DIESER LISTE HINZUGEFUEGT)
1437	if [[ $restart_run != true ]]
1438	then
1439
1440	if [[ ! -f "$source_path/$mainprog" ]]
1441	then
1442	printf "\n\n +++ main program: $mainprog"
1443	printf "\n does not exist in source directory"
1444	printf "\n \"$source_path\"\n"
1445	locat=source; exit
1446	else
1447	if [[ $(echo $source_list \| grep -c $mainprog) = 0 ]]
1448	then
1449	cp $source_path/$mainprog SOURCES_FOR_RUN_$fname
1450	source_list=${mainprog}" $source_list"
1451	fi
1452	fi
1453	fi
1454
1455
1456	# DATEIEN AUS ZUSAETZLICHEM QUELLVERZEICHNIS HINZUFUEGEN
1457	if [[ $restart_run != true && "$add_source_path" != "" ]]
1458	then
1459
1460	# GIBT ES DAS VERZEICHNIS UEBERHAUPT?
1461	if [[ ! -d $add_source_path ]]
1462	then
1463	printf "\n\n +++ WARNING: additional source code directory"
1464	printf "\n \"$add_source_path\" "
1465	printf "\n does not exist or is not a directory."
1466	printf "\n No source code will be used from this directory!\n"
1467	add_source_path=""
1468	sleep 3
1469	else
1470
1471	cd $add_source_path
1472
1473	Names=$(ls -1 *.f90 2>&1)
1474	[[ $(echo $Names \| grep -c '*.f90') = 0 ]] && AddFilenames="$Names"
1475	Names=$(ls -1 *.F90 2>&1)
1476	[[ $(echo $Names \| grep -c '*.F90') = 0 ]] && AddFilenames="$AddFilenames $Names"
1477	Names=$(ls -1 *.F 2>&1)
1478	[[ $(echo $Names \| grep -c '*.F') = 0 ]] && AddFilenames="$AddFilenames $Names"
1479	Names=$(ls -1 *.f 2>&1)
1480	[[ $(echo $Names \| grep -c '*.f') = 0 ]] && AddFilenames="$AddFilenames $Names"
1481	Names=$(ls -1 *.c 2>&1)
1482	[[ $(echo $Names \| grep -c '*.c') = 0 ]] && AddFilenames="$AddFilenames $Names"
1483
1484	cd - > /dev/null
1485	cd SOURCES_FOR_RUN_$fname
1486
1487	for dateiname in $AddFilenames
1488	do
1489	if [[ -f $dateiname ]]
1490	then
1491	printf "\n +++ source code file \"$dateiname\" found in additional"
1492	printf "\n source code directory \"$add_source_path\" "
1493	printf "\n as well as in directory \"$source_path\"."
1494	locat=source; exit
1495	fi
1496
1497	cp $add_source_path/$dateiname .
1498	source_list="$source_list $dateiname"
1499
1500	# Default User-Interface von der Liste entfernen, falls Datei
1501	# ein User-Interface enthaelt
1502	if [[ $( cat $dateiname \| grep -c "END SUBROUTINE user_parin" ) != 0 ]]
1503	then
1504	if [[ -f user_interface.f90 ]]
1505	then
1506	rm -rf user_interface.f90
1507	source_list=`echo $source_list \| sed -e 's/user_interface.f90//'`
1508	printf "\n\n *** \"user_interface.f90\" removed from the files to be translated"
1509	printf "\n since a user-interface is found in file"
1510	printf "\n \"$add_source_path/$dateiname\" \n"
1511	sleep 3
1512	else
1513	printf "\n\n *** user-interface file \"$dateiname\" "
1514	printf "\n added to the files to be translated \n"
1515	sleep 3
1516	fi
1517	fi
1518	done
1519
1520	cd - > /dev/null
1521	fi
1522	fi
1523
1524
1525	# ALLE UNTERPROGRAMME, DIE ZU VEREINBARTEN SOFTWAREPAKETEN GEHOEREN,
1526	# DER LISTE DER ZU UEBERSETZENDEN DATEIEN HINZUFUEGEN
1527	if [[ $restart_run != true && -n $package_list ]]
1528	then
1529
1530	cd $source_path
1531
1532	for package in $package_list
1533	do
1534
1535	[[ $package = "dvrp_graphics+1PE" ]] && package=dvrp_graphics
1536
1537	# ERMITTELE ALLE DATEIEN, DIE ZUM PAKET GEHOEREN
1538	# FEHLERMELDUNGEN WERDEN ABGEFANGEN, DA * AUCH VERZEICHNISSNAMEN
1539	# LIEFERT
1540	package_source_list=`grep "defined( __$package " * 2>/dev/null \| cut -f1 -d:`
1541
1542
1543	# FUEGE DIESE DATEIEN DER LISTE DER ZU UEBERSETZENDEN DATEIEN
1544	# HINZU, FALLS SIE NOCH NICHT DAZUGEHOEREN
1545	for source_list_name in $package_source_list
1546	do
1547	if [[ $(echo $source_list \| grep -c $source_list_name) = 0 ]]
1548	then
1549
1550	# NUR DATEIEN MIT GUELTIGEN ENDUNGEN VERWENDEN
1551	ending=`echo $source_list_name \| cut -f2 -d.`
1552	if [[ "$ending" = f90 \|\| "$ending" = F90 \|\| "$ending" = f \|\| "$ending" = F \|\| "$ending" = c ]]
1553	then
1554	cp $source_list_name $working_directory/SOURCES_FOR_RUN_$fname
1555	source_list="$source_list $source_list_name"
1556	fi
1557	fi
1558	done
1559	done
1560
1561	cd - > /dev/null
1562	fi
1563
1564
1565	# MAKEFILE AUF VORHANDENSEIN PRUEFEN UND KOPIEREN
1566	# BEI RESTART-LAEUFEN LIEGT ES SCHON IM VERZEICHNIS SOURCES_FOR_RUN...
1567	if [[ "$use_makefile" = true && "$restart_run" != true ]]
1568	then
1569	[[ "$makefile" = "" ]] && makefile=$source_path/Makefile
1570	if [[ ! -f $makefile ]]
1571	then
1572	printf "\n +++ file \"$makefile\" does not exist"
1573	printf "\n provide this file or set \"use_makefile=false\" in configuration file\n"
1574	locat=make; exit
1575	else
1576	cp $makefile SOURCES_FOR_RUN_$fname/Makefile
1577	fi
1578	fi
1579
1580	fi # do_compile=true
1581
1582
1583	# FALLS PROGRAMMTEILE UEBERSETZT WERDEN SOLLEN, FOLGEN JETZT EINIGE
1584	# UEBERPRUEFUNGEN UND DAS SETZEN DER PRAEPROZESSOR-DIREKTIVEN
1585	if [[ $do_compile = true ]]
1586	then
1587
1588	# PRAEPROZESSOR-DIREKTIVEN ZUM SELEKTIVEN AUSWAEHLEN VON CODETEILEN
1589	# ZUSAMMENSETZEN
1590	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1591	then
1592	PPOPTS=-Dibm=ibm
1593	elif [[ $(echo $localhost \| cut -c1-3) = nec ]]
1594	then
1595	PPOPTS=-Dnec
1596	else
1597	PPOPTS=-D$localhost
1598	fi
1599	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1600	then
1601	[[ -n $cond1 ]] && PPOPTS="$PPOPTS -D$cond1=$cond1"
1602	[[ -n $cond2 ]] && PPOPTS="$PPOPTS -D$cond2=$cond2"
1603	if [[ $netcdf_support = true ]]
1604	then
1605	PPOPTS="$PPOPTS -Dnetcdf=netcdf"
1606	[[ $localhost != ibms ]] && PPOPTS="$PPOPTS -Dnetcdf_64bit=netcdf_64bit"
1607	fi
1608	if [[ $localhost = ibmy ]]
1609	then
1610	PPOPTS="$PPOPTS -Dibmy_special=ibmy_special"
1611	fi
1612	else
1613	[[ -n $cond1 ]] && PPOPTS="$PPOPTS -D$cond1"
1614	[[ -n $cond2 ]] && PPOPTS="$PPOPTS -D$cond2"
1615	if [[ $netcdf_support = true ]]
1616	then
1617	PPOPTS="$PPOPTS -Dnetcdf"
1618	[[ $localhost != decalpha && $localhost != lctit ]] && PPOPTS="$PPOPTS -Dnetcdf_64bit"
1619	fi
1620	fi
1621	if [[ -n $package_list ]]
1622	then
1623	for package in $package_list
1624	do
1625	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1626	then
1627	if [[ $package != "dvrp_graphics+1PE" ]]
1628	then
1629	PPOPTS="$PPOPTS -D$package=$package"
1630	else
1631	PPOPTS="$PPOPTS -Ddvrp_graphics"
1632	export use_seperate_pe_for_dvrp_output=true
1633	fi
1634	else
1635	if [[ $package != "dvrp_graphics+1PE" ]]
1636	then
1637	PPOPTS="$PPOPTS -D$package"
1638	else
1639	PPOPTS="$PPOPTS -Ddvrp_graphics"
1640	export use_seperate_pe_for_dvrp_output=true
1641	fi
1642	fi
1643	done
1644	fi
1645	if [[ -n $cpp_opts ]]
1646	then
1647	for popts in $cpp_opts
1648	do
1649	PPOPTS="$PPOPTS -D$popts"
1650	done
1651	fi
1652
1653	# -D ARGUMENTEN EINEN DOPPELTEN UNTERSTRICH VORANSTELLEN
1654	PPOPTS=`echo " $PPOPTS" \| sed 's/ -D/ -D__/g'`
1655
1656	# OPTION ZUM EINSCHALTEN DES PRAEPROZESSORS HINZUFUEGEN
1657	if [[ $host = decalpha ]]
1658	then
1659	C_PPOPTS="-cpp -DMPI_REAL=MPI_DOUBLE_PRECISION -DMPI_2REAL=MPI_2DOUBLE_PRECISION $PPOPTS"
1660	elif [[ $(echo $host \| cut -c1-3) = ibm ]]
1661	then
1662	# blanks in PPOPTS muessen durch "," ersetzt werden
1663	PPOPTS=`echo $PPOPTS \| sed 's/ -/,-/g'`
1664	C_PPOPTS="-qsuffix=cpp=f90 -WF,-DMPI_REAL=MPI_DOUBLE_PRECISION,$PPOPTS"
1665	elif [[ $host = lcmuk ]]
1666	then
1667	C_PPOPTS="$PPOPTS -DMPI_REAL=MPI_DOUBLE_PRECISION -DMPI_2REAL=MPI_2DOUBLE_PRECISION"
1668	elif [[ $host = lctit ]]
1669	then
1670	C_PPOPTS="$PPOPTS -Mpreprocess -DMPI_REAL=MPI_DOUBLE_PRECISION -DMPI_2REAL=MPI_2DOUBLE_PRECISION"
1671	elif [[ $(echo $host \| cut -c1-3) = nec ]]
1672	then
1673	C_PPOPTS="-Ep -DMPI_REAL=MPI_REAL8 -DMPI_2REAL=MPI_2REAL8 -DSCFFT=dzfft -DCSFFT=zdfft $PPOPTS"
1674	else
1675	C_PPOPTS="$PPOPTS"
1676	fi
1677
1678	else
1679
1680
1681	# BEI LOKALEN RECHNUNGEN PRUEFEN, OB EXECUTABLE VORHANDEN
1682	if [[ $do_remote = false ]]
1683	then
1684	if [[ ! -f $executable ]]
1685	then
1686	printf "\n +++ executable file: $executable"
1687	printf "\n does not exist"
1688	locat=executable; exit
1689	fi
1690	fi
1691	fi
1692
1693
1694	# JOBMODUS FESTSTELLEN
1695	if [[ "$ENVIRONMENT" = BATCH && $localhost != lctit \|\| "$QUEUE" != interactive && $localhost = lctit ]]
1696	then
1697	jobmo=BATCH
1698	else
1699	jobmo=INTERACTIVE
1700	fi
1701
1702
1703	# HOSTSPEZIFISCHE DEFAULT-COMPILER SETZEN, FALLS NICHT BEREITS
1704	# DURCH BENUTZER ANDERWEITIG VEREINBART
1705	if [[ "$compiler_name" = "" ]]
1706	then
1707	case $localhost in
1708	(unics) compiler_name=f77;;
1709	(lcmuk) if [[ "$cond1" = parallel \|\| "$cond2" = parallel ]]
1710	then
1711	compiler_name=mpif90
1712	else
1713	compiler_name=ifc
1714	fi;;
1715	(lctit) if [[ "$cond1" = parallel \|\| "$cond2" = parallel ]]
1716	then
1717	compiler_name=mpif90
1718	echo ">>> compiler=mpif90"
1719	else
1720	compiler_name=pgf95
1721	echo ">>> compiler=pgf95"
1722	fi;;
1723	(nech) compiler_name=sxmpif90;;
1724	(decalpha) compiler_name=f95;;
1725	(ibm\|ibmb\|ibmh\|ibms\|ibmy) compiler_name=mpxlf95_r;;
1726	(*) printf "\n +++ unknown host name: $localhost \n";
1727	locat=localhost; exit;;
1728	esac
1729	fi
1730
1731
1732	# COMPILER AUF NECK UEBERSCHREIBEN
1733	[[ $localhost = neck ]] && compiler_name=mpif90
1734
1735
1736
1737	# PRAEPROZESSOR-PFAD BESTIMMEN
1738	case $localhost in
1739	(decalpha\|ibm\|ibmb\|ibmh\|ibms\|ibmy\|unics) praeproc=cpp;;
1740	esac
1741
1742
1743	# TEMPORAEREN KATALOGNAMEN BESTIMMEN
1744	kennung=$RANDOM
1745	if [[ "$tmp_user_catalog" = "" ]]
1746	then
1747	if [[ $localhost = ibmb \|\| $localhost = ibmh ]]
1748	then
1749	tmp_user_catalog=$TMPDIR
1750	elif [[ $localhost = nech ]]
1751	then
1752	tmp_user_catalog=$WRKSHR
1753	else
1754	tmp_user_catalog=/tmp
1755	fi
1756	fi
1757	TEMPDIR=$tmp_user_catalog/${usern}.$kennung
1758
1759
1760	# KATALOGNAMEN FUER ZWISCHENSPEICHERUNG VON FORTSETZUNGSLAUFDATEIEN
1761	# BESTIMMEN
1762	if [[ "$tmp_data_catalog" = "" ]]
1763	then
1764	if [[ $localhost = ibmb \|\| $localhost = ibmh ]]
1765	then
1766	tmp_data_catalog=$WORK/mrun_restart_data
1767	elif [[ $localhost = nech ]]
1768	then
1769	tmp_data_catalog=$WRKSHR/mrun_restart_data
1770	else
1771	tmp_data_catalog=/tmp/mrun_restart_data
1772	fi
1773	fi
1774
1775
1776	# EVENTUELL BEI LOKALEN RECHNUNGEN $-ZEICHEN IN ENVIRONMENT-VARIABLEN
1777	# ERSETZEN
1778	if [[ $do_remote = false && $do_compile = true ]]
1779	then
1780	eval fopts=\"$fopts\"
1781	eval lopts=\"$lopts\"
1782	fi
1783
1784
1785
1786	# COMPILE- UND LINK-OPTIONEN BESTIMMEN
1787	FOPTS="$fopts"
1788	LOPTS="$lopts"
1789	ROPTS="$ropts"
1790	if [[ ( $(echo $host \| cut -c1-3) = nec \|\| $(echo $host \| cut -c1-3) = ibm \|\| $host = lctit ) && -n $numprocs ]]
1791	then
1792	XOPT="-X $numprocs"
1793	fi
1794
1795
1796	# BEI VERWENDUNG VON DVRP-SOFTWARE MUSS ENTSPECHENDE GRAFIK-BIBLIOTHEK
1797	# MIT EINGEBUNDEN WERDEN
1798	if [[ -n $package_list ]]
1799	then
1800	if [[ $(echo $package_list \| grep -c dvrp_graphics) != 0 ]]
1801	then
1802
1803	# DVRP-GRAFIK GIBT ES NUR AUF DER IBM AM HLRN, AUF NECH/NECK UND
1804	# DEM NOTEBOOK SCIROCCO
1805	if [[ $host != ibmh && $host != nech && $host != neck && $host != lcmuk && "$local_compile" != true ]]
1806	then
1807	printf "\n"
1808	printf "\n +++ option -p with package \"dvrp_graphics\" only allowed on nech and ibmh"
1809	locat=parameter; exit
1810	fi
1811	if [[ $host = ibmh ]]
1812	then
1813	if [[ $cond1 = debug \|\| $cond2 = debug ]]
1814	then
1815	FOPTS="-I/home/h/hzazchmi/lib/debug $FOPTS"
1816	LOPTS="$LOPTS -L/home/h/hzazchmi/lib/debug -lDVRP2 -lftp"
1817	else
1818	FOPTS="-I/home/h/nikevita/lib_stable/optimize $FOPTS"
1819	LOPTS="$LOPTS -L/home/h/nikevita/lib_stable/optimize -lDVRP2 -lftp"
1820	fi
1821	elif [[ $host = nech ]]
1822	then
1823	FOPTS="-I/import/ds9b/ipf2/b/b323014/lib/optimize $FOPTS"
1824	LOPTS="$LOPTS -L/import/ds9b/ipf2/b/b323014/lib/optimize -lDVRP2 -lftp"
1825	elif [[ $host = neck ]]
1826	then
1827	FOPTS="-I/home/DSRC/NC/tatuyama/pub/dvrp $FOPTS"
1828	LOPTS="$LOPTS -L/home/DSRC/NC/tatuyama/pub/dvrp -lDVRP2 -lftp"
1829	elif [[ $host = lcmuk ]]
1830	then
1831	FOPTS="-I/usr/local/lib/dvrp/optimize $FOPTS"
1832	LOPTS="$LOPTS -L/usr/local/lib/dvrp/optimize -lDVRP2 -lftp"
1833	fi
1834	fi
1835	fi
1836
1837
1838	# EVTL. EINBINDEN DER NETCDF-BIBLIOTHEK
1839	if [[ $netcdf_support = true ]]
1840	then
1841	case $host in
1842	(decalpha) FOPTS="-I${netcdf_path}/include $FOPTS"
1843	LOPTS="$LOPTS -L${netcdf_path}/lib -lnetcdf";;
1844	(ibmb\|ibmh) FOPTS="-I ${netcdf_path}/include-64 $FOPTS"
1845	LOPTS="$LOPTS -L${netcdf_path}/lib -lnetcdf";;
1846	(ibms) FOPTS="-I /applic/netcdf64/src/f90 $FOPTS"
1847	LOPTS="$LOPTS -L${netcdf_path} -lnetcdf";;
1848	(ibmy) FOPTS="-I ${netcdf_path}/include $FOPTS"
1849	LOPTS="$LOPTS -L${netcdf_path}/lib -lnetcdf";;
1850	(lcmuk\|nech\|neck) FOPTS="-I ${netcdf_path}/include $FOPTS"
1851	LOPTS="$LOPTS -L${netcdf_path}/lib -lnetcdf";;
1852	(lctit) FOPTS="-I ${netcdf_path}/src/f90 $FOPTS"
1853	LOPTS="$LOPTS -L${netcdf_path}/src/libsrc -lnetcdf";;
1854
1855	esac
1856	fi
1857
1858	# PRUEFEN DER CPU-ZEIT. (CPUMAX WIRD ALS ENV-VARIABLE VOM HAUTPRO-
1859	# GRAMM BENOETIGT
1860	done=false
1861	while [[ $done = false ]]
1862	do
1863	cputime=$cpumax
1864	if (( $cputime == 0 ))
1865	then
1866	printf "\n +++ cpu-time is undefined"
1867	printf "\n >>> Please type CPU-time in seconds as INTEGER:"
1868	printf "\n >>> "
1869	read cputime 1>/dev/null 2>&1
1870	else
1871	done=true
1872	fi
1873	cpumax=$cputime
1874	done
1875
1876	(( minuten = cputime / 60 ))
1877	(( sekunden = cputime - minuten * 60 ))
1878
1879
1880	# PRUEFEN DER KERNSPEICHERANFORDERUNG
1881	if [[ $do_batch = true ]]
1882	then
1883	done=false
1884	while [[ $done = false ]]
1885	do
1886	if (( memory == 0 ))
1887	then
1888	printf "\n +++ memory demand is undefined"
1889	printf "\n >>> Please type memory in MByte per process as INTEGER:"
1890	printf "\n >>> "
1891	read memory 1>/dev/null 2>&1
1892	else
1893	done=true
1894	fi
1895	done
1896	fi
1897
1898
1899	# PRUEFEN, OB FUER REMOTE-RECHNUNGEN EIN BENUTZERNAME ANGEGEBEN WURDE
1900	if [[ $do_remote = true && -z $remote_username ]]
1901	then
1902	while [[ -z $remote_username ]]
1903	do
1904	printf "\n +++ username on remote host \"$host\" is undefined"
1905	printf "\n >>> Please type username:"
1906	printf "\n >>> "
1907	read remote_username
1908	done
1909	mc="$mc -u$remote_username"
1910	fi
1911
1912	###########################################################################
1913	# HEADER-AUSGABE
1914	###########################################################################
1915
1916
1917	calltime=$(date)
1918	printf "\n"
1919	# [[ $silent = false ]] && clear
1920	printf "#--------------------------------------------------------------# \n"
1921	printf "\| $version$calltime \| \n"
1922	printf "\| \| \n"
1923	spalte1="called on:"; spalte2=$localhost_realname
1924	printf "\| $spalte1$spalte2 \| \n"
1925	if [[ $local_compile = false ]]
1926	then
1927	if [[ $do_remote = true ]]
1928	then
1929	spalte1="execution on:"; spalte2="$host (username: $remote_username)"
1930	else
1931	spalte1="execution on:"; spalte2="$host ($localhost_realname)"
1932	fi
1933	else
1934	spalte1="compiling test only!"; spalte2=""
1935	fi
1936	printf "\| $spalte1$spalte2 \| \n"
1937	if [[ -n $numprocs ]]
1938	then
1939	spalte1="number of PEs:"; spalte2=$numprocs
1940	printf "\| $spalte1$spalte2 \| \n"
1941	fi
1942	if [[ -n $tasks_per_node ]]
1943	then
1944	spalte1="tasks per node:"; spalte2="$tasks_per_node (number of nodes: $nodes)"
1945	printf "\| $spalte1$spalte2 \| \n"
1946	fi
1947	if [[ $threads_per_task != 1 ]]
1948	then
1949	spalte1="threads per task:"; spalte2="$threads_per_task"
1950	printf "\| $spalte1$spalte2 \| \n"
1951	fi
1952	printf "\| \| \n"
1953	if [[ $do_compile = true ]]
1954	then
1955	spalte1=cpp-directives:; spalte2=$C_PPOPTS
1956	printf "\| $spalte1$spalte2 \| \n"
1957	zeile=$(echo "$C_PPOPTS" \| cut -c41-)
1958	while [[ "$zeile" != "" ]]
1959	do
1960	spalte1=""
1961	spalte2=$zeile
1962	printf "\| $spalte1$spalte2 \| \n"
1963	zeile=$(echo "$zeile" \| cut -c41-)
1964	done
1965
1966	spalte1=compiler-options:; spalte2="$FOPTS $MODULE_OPTIONS"
1967	printf "\| $spalte1$spalte2 \| \n"
1968	zeile=$(echo "$FOPTS $MODULE_OPTIONS" \| cut -c41-)
1969	while [[ "$zeile" != "" ]]
1970	do
1971	spalte1=""
1972	spalte2=$zeile
1973	printf "\| $spalte1$spalte2 \| \n"
1974	zeile=$(echo "$zeile" \| cut -c41-)
1975	done
1976
1977	spalte1=linker-options:; spalte2=$LOPTS
1978	printf "\| $spalte1$spalte2 \| \n"
1979	zeile=$(echo "$LOPTS" \| cut -c41-)
1980	while [[ "$zeile" != "" ]]
1981	do
1982	spalte1=""
1983	spalte2=$zeile
1984	printf "\| $spalte1$spalte2 \| \n"
1985	zeile=$(echo "$zeile" \| cut -c41-)
1986	done
1987
1988	spalte1="main program":; spalte2=$mainprog
1989	printf "\| $spalte1$spalte2 \| \n"
1990	if [[ "$use_makefile" = true ]]
1991	then
1992	spalte1="using \"make\" for com"; spalte2="piling and linking"
1993	printf "\| $spalte1$spalte2 \| \n"
1994	fi
1995	# if [[ $vtk_graphics = true ]]
1996	# then
1997	# spalte1=""; spalte2="wird in C++ - Programm eingebunden (vtk)"
1998	# printf "\| $spalte1$spalte2 \| \n"
1999	# fi
2000	else
2001	spalte1=executable:; spalte2=$executable
2002	printf "\| $spalte1$spalte2 \| \n"
2003	fi
2004	printf "\| \| \n"
2005	spalte1="base name of files":; spalte2=$fname
2006	printf "\| $spalte1$spalte2 \| \n"
2007	if [[ $fname != $afname ]]
2008	then
2009	spalte1="base name of input files":; spalte2=$afname
2010	printf "\| $spalte1$spalte2 \| \n"
2011	fi
2012	spalte1="INPUT control list":; spalte2=$input_list
2013	printf "\| $spalte1$spalte2 \| \n"
2014	spalte1="OUTPUT control list":; spalte2=$output_list
2015	printf "\| $spalte1$spalte2 \| \n"
2016
2017	if [[ $do_batch = true \|\| "$LOADLBATCH" = yes ]]
2018	then
2019	spalte1="memory demand / PE":; spalte2="$memory MB"
2020	printf "\| $spalte1$spalte2 \| \n"
2021	spalte1=CPU-time:; spalte2="$minuten:$sekunden"
2022	printf "\| $spalte1$spalte2 \| \n"
2023	fi
2024
2025	if [[ $do_compile = true ]]
2026	then
2027	printf "\| \| \n"
2028	printf "\| Files to be compiled: \| \n"
2029	zeile=$source_list
2030	while [[ "$zeile" != "" ]]
2031	do
2032	spalte3=$zeile
2033	printf "\| $spalte3 \| \n"
2034	zeile=$(echo "$zeile" \| cut -c61-)
2035	done
2036	fi
2037	printf "#--------------------------------------------------------------#"
2038
2039
2040
2041	# BEDINGTE AUSGABE DER DATEIVERBINDUNGEN
2042	if [[ $do_trace = true ]]
2043	then
2044	(( i = 0 ))
2045	while (( i < iin ))
2046	do
2047	(( i = i + 1 ))
2048	if (( i == 1 ))
2049	then
2050	printf "\n\n >>> INPUT-file assignments:\n"
2051	fi
2052	printf "\n ${localin[$i]} : ${absnamein[$i]}"
2053	done
2054	(( i = 0 ))
2055	while (( i < iout ))
2056	do
2057	(( i = i + 1 ))
2058	if (( i == 1 ))
2059	then
2060	printf "\n\n >>> OUTPUT-file assignments:\n"
2061	fi
2062	printf "\n ${localout[$i]} : ${pathout[$i]}"
2063	done
2064	(( i = 0 ))
2065	while (( i < iic ))
2066	do
2067	(( i = i + 1 ))
2068	if (( i == 1 ))
2069	then
2070	printf "\n\n >>> INPUT-commands:\n"
2071	fi
2072	printf "\n ${in_command[$i]}"
2073	done
2074	(( i = 0 ))
2075	while (( i < ioc ))
2076	do
2077	(( i = i + 1 ))
2078	if (( i == 1 ))
2079	then
2080	printf "\n\n >>> OUTPUT-commands:\n"
2081	fi
2082	printf "\n ${out_command[$i]}"
2083	done
2084	fi
2085
2086
2087	# ABFRAGEN BEI AUFRUF AUF LOKALER MASCHINE
2088	if [[ $remotecall = false && $silent = false && $jobmo != BATCH ]]
2089	then
2090	antwort=dummy
2091	printf "\n\n"
2092	while [[ "$antwort" != y && "$antwort" != Y && "$antwort" != n && "$antwort" != N ]]
2093	do
2094	printf " >>> everything o.k. (y/n) ? "
2095	read antwort
2096	done
2097	if [[ $antwort = n \|\| $antwort = N ]]
2098	then
2099	locat=user_abort; (( iec = 0 )); exit
2100	fi
2101	if [[ $do_batch = true ]]
2102	then
2103	printf " >>> batch-job will be created and submitted"
2104	else
2105	if [[ $local_compile = false ]]
2106	then
2107	printf " >>> MRUN will now continue to execute on this machine"
2108	else
2109	printf " >>> a test compilation will now be carried out on this machine"
2110	fi
2111	fi
2112	fi
2113
2114
2115
2116
2117	# FALLS AUF DIESER MASCHINE GERECHNET WERDEN SOLL, WERDEN JETZT ENTSPRE-
2118	# CHENDE AKTIONEN DURCHGEFUEHRT
2119	if [[ $do_batch = false ]]
2120	then
2121
2122
2123	# TEMPORAEREN KATALOG ERZEUGEN
2124	mkdir -p $TEMPDIR
2125	chmod go+rx $TEMPDIR
2126	tmpcreate=true
2127
2128
2129	# SAEMTLICHE QUELLTEXT-DATEIEN BZW. AUSFUEHRBARES PROGRAMM IN
2130	# TEMPORAERES VERZEICHNIS KOPIEREN
2131	if [[ $do_compile = true ]]
2132	then
2133
2134	# ON NEC, COMPILATION IS DONE ON HOST CROSS VIA CROSS COMPILING
2135	# CREATE A TEMPORARY DIRECTORY ON THAT MACHINE (HOME MOUNTED VIA NFS)
2136	if [[ $localhost = nech ]]
2137	then
2138	TEMPDIR_COMPILE=$HOME/work/${usern}.$kennung
2139	if mkdir -p $TEMPDIR_COMPILE
2140	then
2141	printf "\n *** \"$TEMPDIR_COMPILE\" "
2142	printf "\n is generated as temporary directory for cross compiling\n"
2143	else
2144	printf "\n +++ creating directory \"$TEMPDIR_COMPILE\" "
2145	printf "\n needed for cross compilation failed"
2146	locat=compile
2147	exit
2148	fi
2149	else
2150	TEMPDIR_COMPILE=$TEMPDIR
2151	fi
2152
2153	if [[ "$use_makefile" = true ]]
2154	then
2155
2156	# PFADNAMEN FUER DAS MAKE-DEPOSITORY ERMITTELN
2157	line=""
2158	grep "%depository_path" $config_file \| while read line
2159	do
2160	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
2161	then
2162	if [[ "$(echo $line \| cut -d" " -s -f3)" = "" ]]
2163	then
2164	global_depository_path=`echo $line \| cut -d" " -s -f2`
2165	fi
2166	fi
2167	done
2168
2169	line=""
2170	grep " $localhost" $config_file \| grep "%depository_path" \| while read line
2171	do
2172	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
2173	then
2174	local_depository_path=`echo $line \| cut -d" " -s -f2`
2175	fi
2176	done
2177
2178	if [[ "$local_depository_path" = "" ]]
2179	then
2180	if [[ "$global_depository_path" != "" ]]
2181	then
2182	local_depository_path=$global_depository_path
2183	else
2184	printf "\n\n +++ no depository path found in configuration file"
2185	printf "\n for local host \"$localhost\" "
2186	printf "\n please set \"\%depository_path\" in configuration file\n"
2187	locat=config_file; exit
2188	fi
2189	fi
2190	eval local_depository_path=$local_depository_path
2191
2192	basename=`print $mainprog \| cut -f1 -d"."`
2193	eval make_depository=${local_depository_path}/${basename}_current_version.tar
2194	if [[ ! -f $make_depository ]]
2195	then
2196	printf "\n"
2197	printf "\n *** WARNING: make depository \"$make_depository\" not found"
2198	printf "\n \"make\" will fail, if the Makefile or other source files are missing\n"
2199	else
2200	cp $make_depository $TEMPDIR_COMPILE
2201	cd $TEMPDIR_COMPILE
2202	tar -xf $make_depository > /dev/null 2>&1
2203	cd - > /dev/null
2204	fi
2205
2206	cp SOURCES_FOR_RUN_$fname/* $TEMPDIR_COMPILE
2207
2208	# FALLS USER-INTERFACE VORHANDEN UND AUF DATEI MIT ANDEREM NAMEN
2209	# ALS user_interface.f90 LIEGT, DIESEN GEAENDERTEN NAMEN INS
2210	# MAKEFILE EINTRAGEN
2211	cd $TEMPDIR_COMPILE
2212	interface_file=`grep -l "END SUBROUTINE user_parin" $source_list`
2213	if [[ "$interface_file" != "" ]]
2214	then
2215	interface_file=`echo $interface_file \| cut -d"." -f1`
2216	mv Makefile Makefile_old
2217	sed "s/user_interface/$interface_file/g" Makefile_old > Makefile
2218	fi
2219	cd - > /dev/null
2220	fi
2221	else
2222	cp $executable ${TEMPDIR}/a.out
2223	fi
2224
2225
2226	# WECHSEL IN TEMPORAEREN KATALOG
2227	cd $TEMPDIR
2228	printf "\n *** changed to temporary directory: $TEMPDIR"
2229
2230
2231	# OUTPUT-DATEI-VERBINDUNGEN AUF TEMPORAERER DATEI ABLEGEN
2232	# DIESE DATEI KANN VON SPAETER AUFZURUFENDEN BENUTZERPROZEDUREN GELESEN
2233	# WERDEN, UM ZU LOKALEN DATEINAMEN GEHOERENDE PERMANENTE NAMEN ZU
2234	# ERMITTELN
2235	(( i = 0 ))
2236	while (( i < iout ))
2237	do
2238	(( i = i + 1 ))
2239	if [[ "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = tra \|\| "${actionout[$i]}" = trpe ]]
2240	then
2241	printf "${localout[$i]} ${actionout[$i]}\n${pathout[$i]}\n${localhost}_${fname}${endout[$i]}\n" >> OUTPUT_FILE_CONNECTIONS
2242	else
2243	printf "${localout[$i]} ${actionout[$i]}\n${pathout[$i]}\n${frelout[$i]}\n" >> OUTPUT_FILE_CONNECTIONS
2244	fi
2245	done
2246
2247
2248	# EVTL. UEBERSETZUNGSAKTIONEN STARTEN
2249	if [[ $do_compile = true ]]
2250	then
2251
2252
2253	# COMPILING WITH MAKE (ON NEC COMPILER IS CALLED ON HOST CROSS)
2254	if [[ "$use_makefile" = true ]]
2255	then
2256	printf "\n\n\n *** compilation starts \n$striche\n"
2257	printf " *** compilation with make using following options:\n"
2258	printf " compilername: $compiler_name\n"
2259	printf " options: $FOPTS\n"
2260	printf " preprocessor-directives: $C_PPOPTS \n"
2261	printf " linker-options: $LOPTS \n"
2262	printf " source code files: $source_list \n"
2263
2264	if [[ $localhost = nech ]]
2265	then
2266	ssh 136.172.44.192 -l $usern ". /SX/opt/etc/initsx.sh; cd \$HOME/work/${usern}.$kennung; sxmake -f Makefile PROG=a.out F90=$compiler_name COPT=\"$C_PPOPTS\" F90FLAGS=\"$FOPTS\" LDFLAGS=\"$LOPTS\" "
2267	cp $TEMPDIR_COMPILE/a.out .
2268	[[ $? != 0 ]] && compile_error=true
2269	rm -rf $TEMPDIR_COMPILE
2270	else
2271	make -f Makefile PROG=a.out F90=$compiler_name COPT="$C_PPOPTS" F90FLAGS="$FOPTS" LDFLAGS="$LOPTS"
2272	fi
2273
2274	# UEBERSETZUNG "VON HAND" (OHNE MAKE)
2275	else
2276
2277
2278	# UEBERSETZUNG DER QUELLTEXT-DATEIEN UND DES HAUPTPROGRAMMS
2279	# $CPPOPTS FUER CPP-PRAEPROZESSOR WURDEN OBEN BESTIMMT
2280	printf "\n\n\n *** compilation starts \n$striche\n"
2281
2282
2283	# VORWEG EVTL. UEBERSETZUNG VON PROGRAMMTEILEN MIT SPEZIELLEN
2284	# COMPILERN UND/ODER COMPILEROPTIONEN. DIESE WERDEN BEI DER SPAETEREN
2285	# EIGENTLICHEN UEBERSETZUNG ALS OBJECT-FILES EINGEBUNDEN
2286	new_source_list=""
2287	for filename in $source_list
2288	do
2289
2290	basename=`print $filename \| cut -f1 -d"."`
2291
2292	# EVTL. SPEZIELLEN COMPILER FUER UP BESTIMMEN
2293	comp_var=$(eval echo \$comp_$basename) # \$ liefert evtl. fuer source alternativ vereinbarten Compiler
2294	comp_opt_var=$(eval echo \$$basename) # \$$ liefert evtl. fuer source vereinbarte Compiler-Environment-Variable
2295
2296	if [[ "$comp_var" = "" && "$comp_opt_var" = "" ]]
2297	then
2298	new_source_list="$new_source_list "$filename
2299	else
2300
2301	if [[ "$comp_var" = "" ]]
2302	then
2303	SPECIAL_COMPILER=$compiler_name
2304	else
2305	SPECIAL_COMPILER=$comp_var
2306	fi
2307
2308	if [[ "$comp_opt_var" = "" ]]
2309	then
2310	SPECIAL_FOPTS=$FOPTS
2311	else
2312	SPECIAL_FOPTS="$parallel_options $(eval echo \$$comp_opt_var)"
2313	fi
2314
2315	printf " *** compiling of $filename with special compiler call: $SPECIAL_COMPILER $CPPOPTS -c $SPECIAL_FOPTS \n"
2316	$SPECIAL_COMPILER $C_PPOPTS -c $SPECIAL_FOPTS $MODULE_OPTIONS $filename
2317	if [[ $? != 0 ]]
2318	then
2319	printf "\n +++ compiling error occured"
2320	locat=compile
2321	exit
2322	fi
2323	new_source_list="$new_source_list "${basename}.o
2324	fi
2325	done
2326	source_list="$new_source_list"
2327
2328
2329	# EIGENTLICHE UEBERSETZUNG MIT DEN NORMALEN OPTIONEN
2330	printf " *** compilation with standard options: $compiler_name $FOPTS $MODULE_OPTIONS \n"
2331	printf " preprocessor-directives: $C_PPOPTS \n"
2332	printf " linker-options: $LOPTS \n"
2333	printf " source code files: $source_list \n"
2334
2335	$compiler_name $C_PPOPTS $FOPTS $MODULE_OPTIONS $LOPTS $source_list
2336
2337	fi
2338	if [[ $? != 0 \|\| "$compile_error" = true \|\| "$module_compile_error" = true ]]
2339	then
2340	printf "\n +++ error occured while compiling or linking"
2341	locat=compile
2342	exit
2343	else
2344	printf "$striche\n *** compilation finished \n"
2345	fi
2346	fi
2347
2348
2349	# FALLS NUR TESTWEISE KOMPILIERT WERDEN SOLLTE, IST MRUN JETZT FERTIG
2350	if [[ $local_compile = true ]]
2351	then
2352	cd $HOME
2353	rm -rf $TEMPDIR
2354	locat=local_compile; exit
2355	fi
2356
2357
2358	# BEREITSTELLEN DER INPUT-DATEIEN
2359	# SCHLEIFE UEBER ALLE VOM BENUTZER ANGEGEBENEN DATEIEN
2360	(( i = 0 ))
2361	while (( i < iin ))
2362	do
2363	(( i = i + 1 ))
2364	if (( i == 1 ))
2365	then
2366	printf "\n\n *** providing INPUT-files:\n$striche"
2367	fi
2368
2369
2370	# OPTIONALE DATEIEN BEI NICHTVORHANDENSEIN UEBERGEHEN
2371	if [[ "${transin[$i]}" = unavailable ]]
2372	then
2373	if [[ "${extin[$i]}" = "" \|\| "${extin[$i]}" = " " ]]
2374	then
2375	printf "\n +++ WARNING: input file \"${pathin[$i]}/${afname}${endin[$i]}\" "
2376	printf "\n is not available!"
2377	else
2378	printf "\n +++ WARNING: input file \"${pathin[$i]}/${afname}${endin[$i]}.${extin[$i]}\" "
2379	printf "\n is not available!"
2380	fi
2381	continue
2382	fi
2383
2384	# PRUEFEN, OB EINZELDATEI ODER DATEI PRO PROZESSOR
2385	files_for_pes=false; datentyp=file
2386	if [[ "${actionin[$i]}" = pe && -n $numprocs ]]
2387	then
2388	files_for_pes=true; datentyp=directory
2389	actionin[$i]=""
2390	elif [[ "${actionin[$i]}" = pe && ! -n $numprocs ]]
2391	then
2392	actionin[$i]=""
2393	elif [[ "${actionin[$i]}" = arpe && -n $numprocs ]]
2394	then
2395	files_for_pes=true; datentyp=directory
2396	actionin[$i]="ar"
2397	elif [[ "${actionin[$i]}" = arpe && ! -n $numprocs ]]
2398	then
2399	actionin[$i]="ar"
2400	elif [[ "${actionin[$i]}" = flpe && -n $numprocs ]]
2401	then
2402	files_for_pes=true; datentyp=directory
2403	actionin[$i]="fl"
2404	elif [[ "${actionin[$i]}" = flpe && ! -n $numprocs ]]
2405	then
2406	actionin[$i]="fl"
2407	fi
2408
2409	if [[ $files_for_pes = true ]]
2410	then
2411	printf "\n >>> INPUT: ${absnamein[$i]}/.... to ${localin[$i]}"
2412	else
2413	printf "\n >>> INPUT: ${absnamein[$i]} to ${localin[$i]}"
2414	fi
2415
2416	# INPUT-DATEI FUER EINEN FORTSETZUNGSLAUF. ES WIRD GEPRUEFT,
2417	# OB DIESE DATEI NOCH AUF DEM TEMPORAEREN DATENKATALOG VORHANDEN
2418	# IST. FALLS NICHT, WIRD VERSUCHT, SIE ANSCHLIESSEND VOM ARCHIV-
2419	# SERVER ZU HOLEN
2420	if [[ "${actionin[$i]}" = fl ]]
2421	then
2422	printf "\n $datentyp will be fetched from temporary directory \"${tmp_data_catalog}\" !"
2423	if [[ $files_for_pes = false ]]
2424	then
2425	if [[ -f "$tmp_data_catalog/${frelin[$i]}" ]]
2426	then
2427	ln $tmp_data_catalog/${frelin[$i]} ${localin[$i]}
2428	got_tmp[$i]=true
2429	elif [[ -f "$WORK/${frelin[$i]}" && $ignore_archive_error = true ]]
2430	then
2431	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" !"
2432	printf "\n *** trying to use backup copy in \"$WORK\" "
2433	cp $WORK/${frelin[$i]} ${localin[$i]}
2434	else
2435	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" "
2436	printf "\n or \"$tmp_data_catalog\" does not exist!"
2437	printf "\n *** trying to get copy from archive"
2438	actionin[$i]=ar
2439	fi
2440	else
2441	if [[ -d "$tmp_data_catalog/${frelin[$i]}" ]]
2442	then
2443	mkdir ${localin[$i]}
2444	ln $tmp_data_catalog/${frelin[$i]}/* ${localin[$i]}
2445	got_tmp[$i]=true
2446	elif [[ -d "$WORK/${frelin[$i]}" && $ignore_archive_error = true ]]
2447	then
2448	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" !"
2449	printf "\n *** trying to use backup copy in \"$WORK\" "
2450	cp -r $WORK/${frelin[$i]} ${localin[$i]}
2451	else
2452	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" "
2453	printf "\n or \"$tmp_data_catalog\" does not exist!"
2454	printf "\n *** trying to get copy from archive"
2455	actionin[$i]=ar
2456	fi
2457	fi
2458	fi
2459
2460
2461	# DATEI LIEGT AUF ARCHIV-SERVER
2462	if [[ "${actionin[$i]}" = ar ]]
2463	then
2464
2465	if [[ $files_for_pes = false ]]
2466	then
2467	printf "\n file will be restored from archive-system ($archive_system)!"
2468	else
2469	printf "\n directory will be restored from archive-system ($archive_system)!"
2470	fi
2471
2472	file_restored=false
2473
2474	if [[ $archive_system = asterix ]]
2475	then
2476	do_stagein=true
2477	(( stagein_anz = 0 ))
2478	while [[ $do_stagein = true ]]
2479	do
2480	if [[ $files_for_pes = false ]]
2481	then
2482	stagein -O ${frelin[$i]} > STAGEIN_OUTPUT
2483	else
2484	stagein -t -O ${frelin[$i]} > STAGEIN_OUTPUT
2485	fi
2486	cat STAGEIN_OUTPUT
2487	if [[ $(grep -c "st.msg:i24" STAGEIN_OUTPUT) != 0 ]]
2488	then
2489	file_restored=true
2490	do_stagein=false
2491	else
2492	(( stagein_anz = stagein_anz + 1 ))
2493	if (( stagein_anz == 10 ))
2494	then
2495	printf "\n +++ stagein stoped after 10 tries"
2496	locat=stage
2497	exit
2498	fi
2499	printf "\n +++ restoring from archive failed, trying again:"
2500	sleep 900
2501	fi
2502	done
2503	elif [[ $archive_system = DMF ]]
2504	then
2505	if [[ $files_for_pes = false ]]
2506	then
2507	printf "\n +++ restoring of single files impossible with $archive_system !\n"
2508	locat=DMF
2509	exit
2510	else
2511	find $ARCHIVE/${frelin[$i]} -type m -print \| dmget
2512	cp -r $ARCHIVE/${frelin[$i]} $PWD
2513	file_restored=true
2514	fi
2515	elif [[ $archive_system = tivoli ]]
2516	then
2517	if [[ $files_for_pes = false ]]
2518	then
2519	if [[ $localhost = ibmh ]]
2520	then
2521	ssh $usern@hdata.hlrn.de "cp $PERM/${frelin[$i]} $PWD"
2522	else
2523	ssh $usern@bdata.hlrn.de "cp $PERM/${frelin[$i]} $PWD"
2524	fi
2525	else
2526	(( inode = 0 ))
2527	while (( inode < nodes ))
2528	do
2529	if [[ $localhost = ibmh ]]
2530	then
2531	ssh $usern@hdata.hlrn.de "cd $PWD; tar xf $PERM/${frelin[$i]}/${frelin[$i]}.node_$inode.tar"
2532	else
2533	ssh $usern@bdata.hlrn.de "cd $PWD; tar xf $PERM/${frelin[$i]}/${frelin[$i]}.node_$inode.tar"
2534	fi
2535	(( inode = inode + 1 ))
2536	done
2537	fi
2538	file_restored=true
2539	elif [[ $archive_system = ut ]]
2540	then
2541	if [[ $files_for_pes = false ]]
2542	then
2543	cp $UT/${frelin[$i]} .
2544	else
2545	(( inode = 0 ))
2546	while (( inode < nodes ))
2547	do
2548	tar xf $UT/${frelin[$i]}/${frelin[$i]}.node_$inode.tar
2549	(( inode = inode + 1 ))
2550	done
2551	fi
2552	file_restored=true
2553	else
2554	printf "\n +++ archive_system=\"$archive_system\" restore impossible!"
2555	locat=rearchive
2556	exit
2557	fi
2558
2559	if [[ $file_restored = true ]]
2560	then
2561
2562	# DATEI AUCH AUF TEMPORAERES DATENVERZEICHNIS LEGEN, DAMIT
2563	# SIE BEI WEITEREN ZUGRIFFEN NOCH VORHANDEN IST
2564	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog; chmod g+rx $tmp_data_catalog
2565	if [[ $files_for_pes = false ]]
2566	then
2567	ln -f ${frelin[$i]} $tmp_data_catalog/${frelin[$i]}
2568	else
2569	mkdir $tmp_data_catalog/${frelin[$i]}
2570	ln -f ${frelin[$i]}/* $tmp_data_catalog/${frelin[$i]}
2571	fi
2572	got_tmp[$i]=true
2573
2574	# DATEI UNTER LOKALEM NAMEN ZUR VERFUEGUNG STELLEN
2575	mv ${frelin[$i]} ${localin[$i]}
2576
2577	fi
2578	fi
2579
2580
2581	# DATEI LIEGT IM VOM BENUTZER ANGEGEBENEN VERZEICHNIS
2582	if [[ "${actionin[$i]}" = "" \|\| "${actionin[$i]}" = "di" \|\| "${actionin[$i]}" = "npe" ]]
2583	then
2584
2585	if [[ "${actionin[$i]}" = "npe" && -n $numprocs ]]
2586	then
2587
2588	# DATEI WIRD FUER DIE PROZESSOREN EINES PARALLERECHNERS BEREITGESTELLT
2589	printf "\n file will be provided for $numprocs processors"
2590	mkdir ${localin[$i]}
2591	ival=$numprocs
2592	(( ii = 0 ))
2593	while (( ii <= ival-1 ))
2594	do
2595	if (( ii < 10 ))
2596	then
2597	cp ${absnamein[$i]} ${localin[$i]}/_000$ii
2598	elif (( ii < 100 ))
2599	then
2600	cp ${absnamein[$i]} ${localin[$i]}/_00$ii
2601	elif (( ii < 1000 ))
2602	then
2603	cp ${absnamein[$i]} ${localin[$i]}/_0$ii
2604	else
2605	cp ${absnamein[$i]} ${localin[$i]}/_$ii
2606	fi
2607	(( ii = ii + 1 ))
2608	done
2609
2610	else
2611
2612	if [[ $files_for_pes = true ]]
2613	then
2614
2615	# DIE DEN PROZESSOREN EINES PARALLELRECHNERS ZUGEHOERIGEN
2616	# DATEIEN WERDEN BEREITGESTELLT, INDEM ZUERST DER GESAMTE
2617	# KATALOGINHALT KOPIERT UND DANN DIE EINZELNEN DATEIEN
2618	# PER MOVE UMBENANNT WERDEN
2619	printf "\n providing $numprocs files for the respective processors"
2620	mkdir ${localin[$i]}
2621	cp -r ${absnamein[$i]}/* ${localin[$i]}
2622
2623	else
2624	# BEREITSTELLUNG AUF EINPROZESSORRECHNERN
2625	cp ${absnamein[$i]} ${localin[$i]}
2626	fi
2627	fi
2628	fi
2629
2630	done
2631	if (( i != 0 ))
2632	then
2633	printf "\n$striche\n *** all INPUT-files provided \n"
2634	fi
2635
2636
2637	# NAMELIST-DATEI MIT WERTEN VON ENVIRONMENT-VARIABLEN ERZEUGEN (ZU
2638	# LESEN VON PALM)
2639	cat > ENVPAR << %%END%%
2640	&envpar run_identifier = '$fname', host = '$localhost',
2641	write_binary = '$write_binary', tasks_per_node = $tasks_per_node,
2642	maximum_cpu_time_allowed = ${cpumax}. /
2643
2644	%%END%%
2645
2646
2647	# EVENTUELLE INPUT-KOMMANDOS ABARBEITEN
2648	(( i = 0 ))
2649	while (( i < iic ))
2650	do
2651	(( i = i + 1 ))
2652	if (( i == 1 ))
2653	then
2654	printf "\n\n *** execution of INPUT-commands:\n$striche"
2655	fi
2656	printf "\n >>> ${in_command[$i]}"
2657	eval ${in_command[$i]}
2658	if (( i == iic ))
2659	then
2660	printf "\n$striche\n"
2661	fi
2662	done
2663
2664
2665	# VERBLEIBENDE CPU-ZEIT BERECHNEN
2666	cpurest=${cpumax}.
2667
2668
2669	# PROGRAMMSTART
2670	printf "\n\n *** execution starts in directory\n \"`pwd`\"\n$striche\n"
2671	PATH=$PATH:$TEMPDIR
2672
2673	if [[ "$cond1" = debug \|\| "$cond2" = debug ]]
2674	then
2675	if [[ "$ENVIRONMENT" = BATCH ]]
2676	then
2677	printf "\n +++ debug is allowed in interactive mode only"
2678	locat=debug
2679	exit
2680	fi
2681	if [[ $localhost = decalpha ]]
2682	then
2683	dxladebug a.out
2684	elif [[ $localhost = ibmb \|\| $localhost = ibmh ]]
2685	then
2686
2687	# SETUP THE IBM MPI ENVIRONMENT
2688	export MP_SHARED_MEMORY=yes
2689	export AIXTHREADS_SCOPE=S
2690	export OMP_NUM_THREADS=$threads_per_task
2691	export AUTHSTATE=files
2692	export XLFRTEOPTS="nlwidth=132:err_recovery=no" # RECORD-LENGTH OF NAMELIST-OUTPUT
2693
2694	# FOLLOWING OPTIONS ARE MANDATORY FOR TOTALVIEW
2695	export MP_ADAPTER_USE=shared
2696	export MP_CPU_USE=multiple
2697	export MP_TIMEOUT=1200
2698
2699	unset MP_TASK_AFFINITY
2700
2701	# SO FAR, TOTALVIEW NEEDS HOSTFILE MECHANISM FOR EXECUTION
2702	#(( ii = 1 ))
2703	#while (( ii <= $numprocs ))
2704	#do
2705	# echo $localhost_realname >> hostfile
2706	# (( ii = ii + 1 ))
2707	#done
2708	#export MP_HOSTFILE=hostfile
2709
2710	if [[ "$LOADLBATCH" = yes ]]
2711	then
2712	totalview poe a.out $ROPTS
2713	else
2714	echo totalview poe -a a.out -procs $numprocs -rmpool 0 -nodes 1 $ROPTS
2715	export TVDSVRLAUNCHCMD=ssh
2716	totalview poe -a a.out -procs $numprocs -rmpool 0 -nodes 1 $ROPTS
2717	fi
2718	else
2719	printf "\n +++ no debug available on \"$localhost\" "
2720	printf "\n or not implemented in mrun so far"
2721	locat=debug
2722	exit
2723	fi
2724	else
2725	if [[ -n $numprocs ]]
2726	then
2727
2728	# RUNNING THE PROGRAM ON PARALLEL MACHINES
2729	if [[ $(echo $host \| cut -c1-3) = ibm ]]
2730	then
2731	# SETUP THE IBM MPI ENVIRONMENT
2732	export MP_SHARED_MEMORY=yes
2733	export AIXTHREAD_SCOPE=S
2734	export OMP_NUM_THREADS=$threads_per_task
2735	export XLSMPOPTS="spins=0:yields=0:stack=20000000"
2736	export AUTHSTATE=files
2737	export XLFRTEOPTS="nlwidth=132:err_recovery=no" # RECORD-LENGTH OF NAMELIST-OUTPUT
2738	# export MP_PRINTENV=yes
2739
2740	# TUNING-VARIABLEN ZUR VERBESSERUNG DER KOMMUNIKATION
2741	# ZEIGEN ABER DERZEIT (SEP 04, FEDERATION) KAUM WIRKUNG
2742	export MP_WAIT_MODE=poll
2743	[[ $node_usage = not_shared ]] && export MP_SINGLE_THREAD=yes
2744	# export MP_EAGER_LIMIT=65535
2745
2746	# # TESTWEISE FUER TURBOMPI (JAN 05)
2747	# export MPJ_MTAB=128
2748	# export MPJ_ALLTOALL=1
2749	# export MPJ_ALLTOALLV=1
2750
2751	if [[ "$LOADLBATCH" = yes ]]
2752	then
2753	printf "\n--- Control: OMP_NUM_THREADS = \"$OMP_NUM_THREADS\" \n"
2754	if [[ "$cond1" = hpmcount \|\| "$cond2" = hpmcount ]]
2755	then
2756	/opt/optibm/HPM_2_4_1/bin/hpmcount a.out $ROPTS > aout_output 2>&1
2757	else
2758	poe ./a.out $ROPTS > aout_output 2>&1
2759	fi
2760	else
2761	if [[ $localhost = ibmb \|\| $localhost = ibmh \|\| $localhost = ibms ]]
2762	then
2763	poe a.out -procs $numprocs -nodes 1 -rmpool 0 $ROPTS > aout_output 2>&1
2764	elif [[ $localhost = ibmy ]]
2765	then
2766	if [[ -f $hostfile ]]
2767	then
2768	cp $hostfile hostfile
2769	else
2770	(( ii = 1 ))
2771	while (( ii <= $numprocs ))
2772	do
2773	echo $localhost_realname >> hostfile
2774	(( ii = ii + 1 ))
2775	done
2776	fi
2777	export MP_HOSTFILE=hostfile
2778	./a.out -procs $tasks_per_node $ROPTS > aout_output 2>&1
2779	else
2780	if [[ "$host_file" = "" ]]
2781	then
2782	printf "\n +++ no hostfile given in configuration file"
2783	locat=config_file
2784	exit
2785	else
2786	eval host_file=$host_file
2787	fi
2788	export MP_HOSTFILE=$host_file
2789	poe a.out -procs $numprocs -tasks_per_node $numprocs $ROPTS > aout_output 2>&1
2790	fi
2791	fi
2792	elif [[ $host = nech \|\| $host = neck ]]
2793	then
2794	(( ii = nodes ))
2795	if [[ $ii = 1 ]]
2796	then
2797	export F_ERRCNT=0 # acceptable number of errors before program is stopped
2798	export MPIPROGINF=YES
2799	echo "*** execution on single node with mpirun"
2800	mpirun -np $numprocs ./a.out $ROPTS > aout_output 2>&1
2801	else
2802	(( i = 0 ))
2803	while (( i < ii ))
2804	do
2805	echo "-h $i -p $tasks_per_node -e ./mpi_exec_shell" >> multinode_config
2806	(( i = i + 1 ))
2807	done
2808
2809	echo "#!/bin/sh" > mpi_exec_shell
2810	echo " " >> mpi_exec_shell
2811	echo "set -u" >> mpi_exec_shell
2812	echo "F_ERRCNT=0" >> mpi_exec_shell
2813	echo "MPIPROGINV=YES" >> mpi_exec_shell
2814	echo "OMP_NUM_THREADS=$threads_per_task" >> mpi_exec_shell
2815	echo "cpurest=$cpurest" >> mpi_exec_shell
2816	echo "fname=$fname" >> mpi_exec_shell
2817	echo "localhost=$localhost" >> mpi_exec_shell
2818	echo "return_addres=$return_addres" >> mpi_exec_shell
2819	echo "return_username=$return_username" >> mpi_exec_shell
2820	echo "tasks_per_node=$tasks_per_node" >> mpi_exec_shell
2821	echo "write_binary=$write_binary" >> mpi_exec_shell
2822	echo "use_seperate_pe_for_dvrp_output=$use_seperate_pe_for_dvrp_output" >> mpi_exec_shell
2823	echo " " >> mpi_exec_shell
2824	echo "export F_ERRCNT" >> mpi_exec_shell
2825	echo "export MPIPROGINV" >> mpi_exec_shell
2826	echo "export OMP_NUM_THREADS" >> mpi_exec_shell
2827	echo "export cpurest" >> mpi_exec_shell
2828	echo "export fname" >> mpi_exec_shell
2829	echo "export localhost" >> mpi_exec_shell
2830	echo "export return_addres" >> mpi_exec_shell
2831	echo "export return_username" >> mpi_exec_shell
2832	echo "export tasks_per_node" >> mpi_exec_shell
2833	echo "export write_binary" >> mpi_exec_shell
2834	echo "export use_seperate_pe_for_dvrp_output" >> mpi_exec_shell
2835	echo " " >> mpi_exec_shell
2836	echo "exec ./a.out > aout_output 2>&1" >> mpi_exec_shell
2837
2838	chmod u+x mpi_exec_shell
2839	export MPIPROGINF=YES
2840	mpirun -f multinode_config &
2841	wait
2842
2843	fi
2844	elif [[ $host = lcmuk ]]
2845	then
2846
2847	# COPY HOSTFILE FROM SOURCE DIRECTORY OR CREATE IT, IF IT
2848	# DOES NOT EXIST
2849	if [[ -f $hostfile ]]
2850	then
2851	cp $hostfile hostfile
2852	else
2853	(( ii = 1 ))
2854	while (( ii <= $numprocs / $threads_per_task ))
2855	do
2856	echo $localhost_realname >> hostfile
2857	(( ii = ii + 1 ))
2858	done
2859	fi
2860	(( ii = $numprocs / $threads_per_task ))
2861	eval zeile=\"`head -n $ii hostfile`\"
2862	printf "\n *** running on: $zeile"
2863	export OMP_NUM_THREADS=$threads_per_task
2864	if [[ $threads_per_task != 1 ]]
2865	then
2866	printf "\n threads per task: $threads_per_task"
2867	fi
2868	printf "\n\n"
2869	if [[ $scirocco = true ]]
2870	then
2871	mpiexec -machinefile hostfile -n $ii a.out $ROPTS > aout_output 2>&1
2872	else
2873	mpirun -machinefile hostfile -np $ii a.out $ROPTS > aout_output 2>&1
2874	fi
2875	elif [[ $host = decalpha ]]
2876	then
2877	dmpirun -np $numprocs a.out $ROPTS > aout_output 2>&1
2878	elif [[ $host = lctit ]]
2879	then
2880	export runfile=runfile.$kennung
2881
2882	echo "cd $PWD" > $runfile
2883	echo "export OMP_NUM_THREADS=$OMP_NUM_THREADS" >> $runfile
2884	echo "export cpurest=$cpurest" >> $runfile
2885	echo "export fname=$fname" >> $runfile
2886	echo "export localhost=$localhost" >> $runfile
2887	echo "export return_addres=$return_addres" >> $runfile
2888	echo "export return_username=$return_username" >> $runfile
2889	echo "export tasks_per_node=$tasks_per_node" >> $runfile
2890	echo "export write_binary=$write_binary" >> $runfile
2891	echo "export use_seperate_pe_for_dvrp_output=$use_seperate_pe_for_dvrp_output" >> $runfile
2892	echo "./a.out" >> $runfile
2893	chmod u+x $runfile
2894
2895	if [[ "$QUEUE" = interactive ]]
2896	then
2897	mpirun -np $numprocs $runfile $ROPTS > aout_output 2>&1
2898	else
2899	n1ge -fore -mpi $numprocs -q $queue $runfile $ROPTS > aout_output 2>&1
2900	fi
2901
2902	rm $runfile
2903	else
2904	mpprun -n $numprocs a.out $ROPTS > aout_output 2>&1
2905	fi
2906	[[ $? != 0 ]] && execution_error=true
2907
2908
2909	# PERFORMANCE-AUSWERTUNG MIT APPRENTICE
2910	if [[ "$cond1" = apprentice \|\| "$cond2" = apprentice ]]
2911	then
2912	apprentice
2913	fi
2914	else
2915	a.out $ROPTS > aout_output 2>&1
2916	fi
2917	fi
2918	if [[ $? != 0 \|\| $execution_error = true ]]
2919	then
2920
2921	# ABBRUCH BEI LAUFZEITFEHLER
2922	[[ ! ( "$cond1" = debug \|\| "$cond2" = debug ) ]] && cat aout_output
2923	printf "\n +++ runtime error occured"
2924	locat=execution
2925	exit
2926	else
2927	[[ ! ( "$cond1" = debug \|\| "$cond2" = debug ) ]] && cat aout_output
2928	printf "\n$striche\n *** execution finished \n"
2929	fi
2930
2931
2932
2933	# EVENTUELLE OUTPUT-KOMMANDOS ABARBEITEN
2934	(( i = 0 ))
2935	while (( i < ioc ))
2936	do
2937	(( i = i + 1 ))
2938	if (( i == 1 ))
2939	then
2940	printf "\n\n *** execution of OUTPUT-commands:\n$striche"
2941	fi
2942	printf "\n >>> ${out_command[$i]}"
2943	eval ${out_command[$i]}
2944	if (( i == ioc ))
2945	then
2946	printf "\n$striche\n"
2947	fi
2948	done
2949
2950
2951	# EVTL. INHALT DES AKTUELLEN VERZEICHNISSES AUSGEBEN
2952	if [[ $do_trace = true ]]
2953	then
2954	printf "\n\n"
2955	ls -al
2956	fi
2957
2958
2959
2960	# OUTPUT-DATEIEN AN IHRE ZIELORTE KOPIEREN
2961	(( i = 0 ))
2962	while (( i < iout ))
2963	do
2964	(( i = i + 1 ))
2965	if (( i == 1 ))
2966	then
2967	printf "\n\n *** saving OUTPUT-files:\n$striche"
2968	fi
2969
2970	# PRUEFEN, OB EINZELDATEI ODER DATEI PRO PROZESSOR
2971	files_for_pes=false; filetyp=file
2972	if [[ "${actionout[$i]}" = pe && -n $numprocs ]]
2973	then
2974	files_for_pes=true; filetyp=directory
2975	actionout[$i]=""
2976	elif [[ "${actionout[$i]}" = pe && ! -n $numprocs ]]
2977	then
2978	actionout[$i]=""
2979	elif [[ "${actionout[$i]}" = arpe && -n $numprocs ]]
2980	then
2981	files_for_pes=true; filetyp=directory
2982	actionout[$i]="ar"
2983	elif [[ "${actionout[$i]}" = arpe && ! -n $numprocs ]]
2984	then
2985	actionout[$i]="ar"
2986	elif [[ "${actionout[$i]}" = flpe && -n $numprocs ]]
2987	then
2988	files_for_pes=true; filetyp=directory
2989	actionout[$i]="fl"
2990	elif [[ "${actionout[$i]}" = flpe && ! -n $numprocs ]]
2991	then
2992	actionout[$i]="fl"
2993	elif [[ "${actionout[$i]}" = trpe && -n $numprocs ]]
2994	then
2995	files_for_pes=true; filetyp=directory
2996	actionout[$i]="tr"
2997	elif [[ "${actionout[$i]}" = trpe && ! -n $numprocs ]]
2998	then
2999	actionout[$i]="tr"
3000	fi
3001
3002	if [[ ! -f ${localout[$i]} && $files_for_pes = false ]]
3003	then
3004	printf "\n +++ temporary OUTPUT-file ${localout[$i]} does not exist\n"
3005	elif [[ ! -f ${localout[$i]}/_0000 && $files_for_pes = true ]]
3006	then
3007	printf "\n +++ temporary OUTPUT-file ${localout[$i]}/.... does not exist\n"
3008	else
3009
3010
3011	# KOPIEREN PER FTP/SCP (IMMER IM BINAERMODUS, -M: FALLS ZIELKATALOG
3012	# NICHT VORHANDEN, WIRD VERSUCHT, IHN ANZULEGEN), ABER NUR BEI
3013	# REMOTE-RECHNUNGEN
3014	if [[ "${actionout[$i]}" = tr ]]
3015	then
3016	if [[ $localhost != $fromhost ]]
3017	then
3018	if [[ $files_for_pes = false ]]
3019	then
3020	cps=""
3021	cst=""
3022	else
3023	cps=-c
3024	cst="/"
3025	fi
3026	if [[ $localhost = ibmh \|\| $localhost = ibmb \|\| $localhost = nech ]]
3027	then
3028
3029	# TRANSFER IN EIGENSTAENDIGEM JOB
3030	# ZUERST KOPIE DER DATEI INS TEMPORAERE DATENVERZEICHNIS
3031	[[ ! -d $tmp_data_catalog/TRANSFER ]] && mkdir -p $tmp_data_catalog/TRANSFER
3032	file_to_transfer=${fname}_${localout[$i]}_to_transfer_$kennung
3033	if [[ $files_for_pes = false ]]
3034	then
3035	ln -f ${localout[$i]} $tmp_data_catalog/TRANSFER/$file_to_transfer
3036	else
3037	mkdir $tmp_data_catalog/TRANSFER/$file_to_transfer
3038	ln ${localout[$i]}/* $tmp_data_catalog/TRANSFER/$file_to_transfer
3039	fi
3040
3041	echo "set -x" > transfer_${localout[$i]}
3042	echo "cd $tmp_data_catalog/TRANSFER" >> transfer_${localout[$i]}
3043	if [[ $filetransfer_protocol = ftp ]]
3044	then
3045	if [[ $files_for_pes = true ]]
3046	then
3047	printf "\n +++ WARNING: no transfer of catalogs via ftpcopy\n"
3048	fi
3049	printf "\n >>> OUTPUT: ${localout[$i]} by FTP in seperate job to"
3050	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}"
3051	printf "\n or higher cycle\n"
3052	echo "ftpcopy -b -m $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
3053	else
3054	printf "\n >>> OUTPUT: ${localout[$i]}$cst by SCP in seperate job to"
3055	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}$cst"
3056	printf "\n or higher cycle\n"
3057	echo "batch_scp $cps -b -m -u $return_username $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
3058	fi
3059	echo "[[ \$? = 0 ]] && rm $file_to_transfer" >> transfer_${localout[$i]}
3060
3061	if [[ $localhost = nech ]]
3062	then
3063	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 900 -f $filetransfer_protocol transfer_${localout[$i]}
3064	else
3065	if [[ "$LOGNAME" = b323013 ]]
3066	then
3067	subjob -v -q c1 -X 0 -m 1000 -t 900 -f $filetransfer_protocol transfer_${localout[$i]}
3068	else
3069	subjob -d -v -q c1 -X 0 -m 1000 -t 900 -f $filetransfer_protocol transfer_${localout[$i]}
3070	fi
3071	fi
3072
3073	else
3074
3075	# TRANSFER INNERHALB DIESES JOBS
3076	transfer_failed=false
3077	if [[ $filetransfer_protocol = ftp ]]
3078	then
3079	if [[ $files_for_pes = true ]]
3080	then
3081	printf "\n +++ WARNING: no transfer of catalogs via ftpcopy\n"
3082	fi
3083	printf "\n >>> OUTPUT: ${localout[$i]} by FTP to"
3084	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}\n"
3085	ftpcopy -b -m $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
3086	[[ $? != 0 ]] && transfer_failed=true
3087	else
3088	printf "\n >>> OUTPUT: ${localout[$i]}$cst by SCP to"
3089	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}$cst\n"
3090	batch_scp $cps -b -m -u $return_username $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
3091	[[ $? != 0 ]] && transfer_failed=true
3092	fi
3093
3094	# BEI FEHLGESCHLAGENEM TRANSFER SICHERUNGSKOPIE AUF
3095	# LOKALER MASCHINE ANLEGEN
3096	if [[ $transfer_failed = true ]]
3097	then
3098	printf " +++ transfer failed. Trying to save a copy on the local host under:\n"
3099	printf " ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung\n"
3100
3101	# ERSTMAL PRUEFEN, OB VERZEICHNIS EXISTIERT. GEGEBENENFALLS
3102	# ANLEGEN.
3103	eval local_catalog=${pathout[$i]}
3104	if [[ ! -d $local_catalog ]]
3105	then
3106	printf " *** local directory does not exist. Trying to create:\n"
3107	printf " $local_catalog \n"
3108	mkdir -p $local_catalog
3109	fi
3110	eval cp ${localout[$i]} ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung
3111	transfer_problems=true
3112	fi
3113	fi
3114	else
3115
3116	# WERTZUWEISUNG, SO DASS WEITER UNTEN NUR KOPIERT WIRD
3117	actionout[$i]=""
3118	fi
3119	fi
3120
3121
3122	# APPEND PER FTP/SCP (IMMER IM BINAERMODUS, -M: FALLS ZIELKATALOG
3123	# NICHT VORHANDEN, WIRD VERSUCHT, IHN ANZULEGEN), ABER NUR BEI
3124	# REMOTE-RECHNUNGEN
3125	if [[ "${actionout[$i]}" = tra ]]
3126	then
3127	if [[ $localhost != $fromhost ]]
3128	then
3129	if [[ $localhost = ibmh \|\| $localhost = ibmb \|\| $localhost = nech ]]
3130	then
3131
3132	# TRANSFER IN EIGENSTAENDIGEM JOB
3133	# ZUERST KOPIE DER DATEI INS TEMPORAERE DATENVERZEICHNIS
3134	[[ ! -d $tmp_data_catalog/TRANSFER ]] && mkdir -p $tmp_data_catalog/TRANSFER
3135	file_to_transfer=${fname}_${localout[$i]}_to_transfer_$kennung
3136	ln -f ${localout[$i]} $tmp_data_catalog/TRANSFER/$file_to_transfer
3137
3138	echo "set -x" > transfer_${localout[$i]}
3139	echo "cd $tmp_data_catalog/TRANSFER" >> transfer_${localout[$i]}
3140	if [[ $filetransfer_protocol = ftp ]]
3141	then
3142	printf "\n >>> OUTPUT: ${localout[$i]} append by FTP in seperate job to"
3143	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}"
3144	printf "\n or higher cycle\n"
3145	echo "ftpcopy -A -b -m $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
3146	else
3147	printf "\n >>> OUTPUT: ${localout[$i]} append by SCP in seperate job to"
3148	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}"
3149	printf "\n or higher cycle\n"
3150	echo "batch_scp -A -b -m -u $return_username $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
3151	fi
3152	echo "[[ \$? = 0 ]] && rm $file_to_transfer" >> transfer_${localout[$i]}
3153
3154	if [[ $localhost = nech ]]
3155	then
3156	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 900 -f $filetransfer_protocol transfer_${localout[$i]}
3157	else
3158	if [[ $LOGNAME = b323013 ]]
3159	then
3160	subjob -v -q c1 -X 0 -m 1000 -t 900 -f $filetransfer_protocol transfer_${localout[$i]}
3161	else
3162	subjob -d -v -q c1 -X 0 -m 1000 -t 900 -f $filetransfer_protocol transfer_${localout[$i]}
3163	fi
3164	fi
3165
3166	else
3167
3168	# TRANSFER INNERHALB DIESES JOBS
3169	transfer_failed=false
3170	if [[ $filetransfer_protocol = ftp ]]
3171	then
3172	printf "\n >>> OUTPUT: ${localout[$i]} append by FTP to"
3173	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}\n"
3174	ftpcopy -A -b -m $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
3175	[[ $? != 0 ]] && transfer_failed=true
3176	else
3177	printf "\n >>> OUTPUT: ${localout[$i]} append by SCP to"
3178	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}\n"
3179	batch_scp -A -b -m -u $return_username $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
3180	[[ $? != 0 ]] && transfer_failed=true
3181	fi
3182
3183	# BEI FEHLGESCHLAGENEM TRANSFER SICHERUNGSKOPIE AUF
3184	# LOKALER MASCHINE ANLEGEN
3185	if [[ $transfer_failed = true ]]
3186	then
3187	printf " +++ transfer failed. Trying to save a copy on the local host under:\n"
3188	printf " ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung\n"
3189
3190	# ERSTMAL PRUEFEN, OB VERZEICHNIS EXISTIERT. GEGEBENENFALLS
3191	# ANLEGEN
3192	eval local_catalog=${pathout[$i]}
3193	if [[ ! -d $local_catalog ]]
3194	then
3195	printf " *** local directory does not exist. Trying to create:\n"
3196	printf " $local_catalog \n"
3197	mkdir -p $local_catalog
3198	fi
3199
3200	eval cp ${localout[$i]} ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung
3201	transfer_problems=true
3202	fi
3203	fi
3204	else
3205
3206	# WERTZUWEISUNG, SO DASS WEITER UNTEN NUR APPEND AUF
3207	# LOKALER MASCHINE DURCHGEFUEHRT WIRD
3208	actionout[$i]=a
3209	fi
3210	fi
3211
3212
3213	# OUTPUT-DATEI FUER EINEN FORTSETZUNGSLAUF. DATEI WIRD PER
3214	# LINK AUF DEN TEMPORAEREN DATENKATALOG GELEGT. OPTION -f WIRD
3215	# VERWENDET, FALLS DORT NOCH EINE DATEI GLEICHEN NAMENS VORHANDEN
3216	# SEIN SOLLTE. ANSCHLIESSEND WIRD SEINE ARCHIVIERUNG ANGESTOSSEN
3217	if [[ "${actionout[$i]}" = fl ]]
3218	then
3219	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
3220	chmod g+rx $tmp_data_catalog
3221	if [[ $files_for_pes = false ]]
3222	then
3223	printf "\n >>> OUTPUT: ${localout[$i]} to"
3224	printf "\n $tmp_data_catalog/${frelout[$i]} (temporary data catalog)\n"
3225	ln -f ${localout[$i]} $tmp_data_catalog/${frelout[$i]}
3226	else
3227	printf "\n >>> OUTPUT: ${localout[$i]}/.... to"
3228	printf "\n $tmp_data_catalog/${frelout[$i]} (temporary data catalog)\n"
3229	mkdir $tmp_data_catalog/${frelout[$i]}
3230	ln -f ${localout[$i]}/* $tmp_data_catalog/${frelout[$i]}
3231	fi
3232
3233
3234	# ARCHIVIERUNGSJOB WIRD ERZEUGT UND ABGESCHICKT
3235	if [[ $store_on_archive_system = true ]]
3236	then
3237
3238	if [[ $archive_system = asterix ]]
3239	then
3240	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3241	if [[ $files_for_pes = false ]]
3242	then
3243	echo "stageout ${frelout[$i]} > STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3244	else
3245	echo "stageout -t ${frelout[$i]} > STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3246	fi
3247	echo "cat STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3248	echo "if [[ \$(grep -c \"st.msg:150\" STAGE_OUTPUT${i}_$kennung) != 0 ]]" >> archive_${frelout[$i]}
3249	echo "then" >> archive_${frelout[$i]}
3250	echo " do_stageout=false" >> archive_${frelout[$i]}
3251	echo "else" >> archive_${frelout[$i]}
3252	echo " echo \" +++ $filetyp ${frelout[$i]} could not be stored on archive-system\" " >> archive_${frelout[$i]}
3253	echo " cat /dev/null > ~/job_queue/ARCHIVE_ERROR_$fname" >> archive_${frelout[$i]}
3254	echo " cat STAGE_OUTPUT${i}_$kennung > ~/job_queue/archive_${frelout[$i]}_error" >> archive_${frelout[$i]}
3255	echo " echo \" *** $filetyp ${frelout[$i]} will be copied to \$WORK as backup\" " >> archive_${frelout[$i]}
3256	if [[ $files_for_pes = false ]]
3257	then
3258	echo " cp ${frelout[$i]} \$WORK" >> archive_${frelout[$i]}
3259	else
3260	echo " cp -r ${frelout[$i]} \$WORK/${frelout[$i]}" >> archive_${frelout[$i]}
3261	fi
3262	echo " echo \" *** $filetyp ${frelout[$i]} saved\" " >> archive_${frelout[$i]}
3263	echo "fi" >> archive_${frelout[$i]}
3264	echo "rm STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3265	elif [[ $archive_system = DMF ]]
3266	then
3267	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3268	if [[ $files_for_pes = false ]]
3269	then
3270	printf "\n +++ archiving of single files impossible with $archive_system !\n"
3271	locat=DMF
3272	exit
3273	else
3274	# FUER RECHNER IN JUELICH. DORT KOENNTEN AUCH
3275	# EINZELNE DATEIEN GESICHERT WERDEN (SPAETER KORR.)
3276	echo "rm -rf \$ARCHIVE/${frelout[$i]}" >> archive_${frelout[$i]}
3277	echo "cp -r ${frelout[$i]} \$ARCHIVE" >> archive_${frelout[$i]}
3278	fi
3279	elif [[ $archive_system = tivoli ]]
3280	then
3281	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3282	if [[ $files_for_pes = false ]]
3283	then
3284	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3285	echo "set -x" >> archive_${frelout[$i]}
3286	echo "rm -rf \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3287	echo "cp ${frelout[$i]} \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3288	else
3289
3290	echo "set -x" >> archive_${frelout[$i]}
3291	echo "rm -rf \$PERM/${frelout[$i]}/*" >> archive_${frelout[$i]}
3292	echo "[[ ! -d \$PERM/${frelout[$i]} ]] && mkdir $PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3293	cd $tmp_data_catalog
3294	all_files=`ls -1 ${frelout[$i]}/*`
3295	cd - > /dev/null
3296	(( inode = 0 ))
3297	(( tp1 = tasks_per_node + 1 ))
3298	while (( inode < nodes ))
3299	do
3300	# echo "*** all_files = \"$all_files\" "
3301	files=`echo $all_files \| cut -d" " -f1-$tasks_per_node`
3302	all_files=`echo $all_files \| cut -d" " -f$tp1-`
3303	# echo "*** tasks_per_node = \"$tasks_per_node\" "
3304	# echo "*** files = \"$files\" "
3305	# echo "*** all_files = \"$all_files\" "
3306	echo "tar cvf \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar $files" >> archive_${frelout[$i]}
3307	echo "dsmc incremental \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar" >> archive_${frelout[$i]}
3308	echo "dsmmigrate \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar" >> archive_${frelout[$i]}
3309	(( inode = inode + 1 ))
3310	done
3311	# echo "rm -rf \$PERM/${frelout[$i]}.tar" >> archive_${frelout[$i]}
3312	# echo "tar cvf \$PERM/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
3313	fi
3314	elif [[ $archive_system = ut ]]
3315	then
3316	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3317	if [[ $files_for_pes = false ]]
3318	then
3319	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3320	echo "set -x" >> archive_${frelout[$i]}
3321	echo "rm -rf \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3322	echo "cp ${frelout[$i]} \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3323	else
3324
3325	echo "set -x" >> archive_${frelout[$i]}
3326	echo "rm -rf \$UT/${frelout[$i]}/*" >> archive_${frelout[$i]}
3327	echo "[[ ! -d \$UT/${frelout[$i]} ]] && mkdir $UT/${frelout[$i]}" >> archive_${frelout[$i]}
3328	cd $tmp_data_catalog
3329	all_files=`ls -1 ${frelout[$i]}/*`
3330	cd - > /dev/null
3331	(( inode = 0 ))
3332	(( tp1 = tasks_per_node + 1 ))
3333	while (( inode < nodes ))
3334	do
3335	files=`echo $all_files \| cut -d" " -f1-$tasks_per_node`
3336	all_files=`echo $all_files \| cut -d" " -f$tp1-`
3337	echo "tar cvf \$UT/${frelout[$i]}/${frelout[$i]}.node_$inode.tar $files" >> archive_${frelout[$i]}
3338	(( inode = inode + 1 ))
3339	done
3340	fi
3341	elif [[ $archive_system = none ]]
3342	then
3343	printf " +++ archiving on $localhost not available!\n"
3344	fi
3345
3346	if [[ $archive_system != none ]]
3347	then
3348	if [[ $localhost = ibmh \|\| $localhost = ibmb ]]
3349	then
3350	subjob -d -v -q cdata -X 0 -m 1000 -t 7200 -f $filetransfer_protocol archive_${frelout[$i]}
3351	elif [[ $localhost = nech ]]
3352	then
3353	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 7200 -f $filetransfer_protocol archive_${frelout[$i]}
3354	fi
3355	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
3356	fi
3357	else
3358	printf " +++ caution: option -A is switched on. No archiving on $archive_system!\n"
3359	fi
3360
3361
3362	# LEERDATEI IM BENUTZERVERZEICHNIS ANLEGEN, DAMIT BEKANNT IST,
3363	# WIE DIE HOECHSTE ZYKLUSNUMMER AUF DEM ARCHIV-SYSTEM LAUTET
3364	if [[ $files_for_pes = false ]]
3365	then
3366	cat /dev/null > ${pathout[$i]}
3367	else
3368	mkdir -p ${pathout[$i]}
3369	fi
3370
3371	fi
3372
3373
3374	# KOPIEREN AUF LOKALER MASCHINE ZUM ARCHIV-SYSTEM
3375	# AUSSERDEM MUSS LEERDATEI ANGELEGT WERDEN, DAMIT BEKANNT IST,
3376	# WIE DIE HOECHSTE ZYKLUSNUMMER AUF DEM ARCHIV-SYSTEM LAUTET
3377	# FALLS IRGENDEINE (VON MEHREREN) ARCHIVIERUNGEN SCHIEF GEHT,
3378	# WIRD FLAG GESETZT UND BLEIBT AUCH BEI WEITEREN ORDNUNGS-
3379	# GEMAESSEN ARCHIVIERUNGEN GESETZT
3380	if [[ "${actionout[$i]}" = ar ]]
3381	then
3382	if [[ $files_for_pes = false ]]
3383	then
3384	printf "\n >>> OUTPUT: ${localout[$i]} to"
3385	printf "\n ${pathout[$i]}"
3386	printf "\n File will be copied to archive-system ($archive_system) !\n"
3387	else
3388	printf "\n >>> OUTPUT: ${localout[$i]}/_.... to"
3389	printf "\n ${pathout[$i]}"
3390	printf "\n Directory will be copied to archive-system ($archive_system) !\n"
3391	fi
3392	mv ${localout[$i]} ${frelout[$i]}
3393
3394	file_saved=false
3395
3396	if [[ $archive_system = asterix ]]
3397	then
3398	do_stageout=true
3399	(( stageout_anz = 0 ))
3400	while [[ $do_stageout = true ]]
3401	do
3402	if [[ $files_for_pes = false ]]
3403	then
3404	stageout ${frelout[$i]} > STAGE_OUTPUT
3405	else
3406	stageout -t ${frelout[$i]} > STAGE_OUTPUT
3407	fi
3408	cat STAGE_OUTPUT
3409	if [[ $(grep -c "st.msg:150" STAGE_OUTPUT) != 0 ]]
3410	then
3411	file_saved=true
3412	do_stageout=false
3413	else
3414	if [[ $files_for_pes = false ]]
3415	then
3416	printf "\n +++ file ${frelout[$i]} could not be saved on archive-system"
3417	else
3418	printf "\n +++ directory ${frelout[$i]} could not be saved on archive-system"
3419	fi
3420	(( stageout_anz = stageout_anz + 1 ))
3421	if (( stageout_anz == 10 ))
3422	then
3423	printf "\n +++ stoped after 10 unsuccessful tries!"
3424	archive_save=false
3425	do_stageout=false
3426	else
3427	printf "\n *** new try to store on archive after 15 min:"
3428	sleep 900
3429	fi
3430	fi
3431	done
3432	elif [[ $archive_system = DMF ]]
3433	then
3434	if [[ $files_for_pes = false ]]
3435	then
3436	printf "\n +++ archiving of single files impossible on $archive_system!\n"
3437	locat=DMF
3438	exit
3439	else
3440	rm -rf $ARCHIVE/${frelout[$i]}
3441	cp -r ${frelout[$i]} $ARCHIVE
3442	fi
3443	file_saved=true
3444	elif [[ $archive_system = tivoli ]]
3445	then
3446	# ARCHIVIERUNG NUR PER BATCH-JOB MOEGLICH
3447	# DATEI MUSS ZWISCHENZEITLICH INS TEMPORAERE DATENVERZEICHNIS
3448	# GELEGT WERDEN
3449	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
3450	chmod g+rx $tmp_data_catalog
3451	if [[ $files_for_pes = false ]]
3452	then
3453	ln -f ${frelout[$i]} $tmp_data_catalog/${frelout[$i]}
3454	else
3455	mkdir $tmp_data_catalog/${frelout[$i]}
3456	ln -f ${frelout[$i]}/* $tmp_data_catalog/${frelout[$i]}
3457	fi
3458
3459	# BATCH JOB GENERIEREN UND ABSCHICKEN; DATEI MUSS WIEDER
3460	# AUS TEMPORAEREM DATENVERZEICHNIS ENTFERNT WERDEN
3461	echo "cd $tmp_data_catalog" > archive_${frelout[$i]}
3462	if [[ $files_for_pes = false ]]
3463	then
3464	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3465	echo "rm -rf \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3466	echo "cp ${frelout[$i]} \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3467	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3468	else
3469	echo "rm -rf \$PERM/${frelout[$i]}.tar" >> archive_${frelout[$i]}
3470	echo "tar cvf \$PERM/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
3471	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3472	fi
3473
3474	subjob -v -d -q cdata -X 0 -m 1000 -t 7200 -f $filetransfer_protocol archive_${frelout[$i]}
3475	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
3476	file_saved=true
3477
3478	elif [[ $archive_system = ut ]]
3479	then
3480	# ARCHIVIERUNG NUR PER BATCH-JOB MOEGLICH
3481	# DATEI MUSS ZWISCHENZEITLICH INS TEMPORAERE DATENVERZEICHNIS
3482	# GELEGT WERDEN
3483	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
3484	chmod g+rx $tmp_data_catalog
3485	if [[ $files_for_pes = false ]]
3486	then
3487	ln -f ${frelout[$i]} $tmp_data_catalog/${frelout[$i]}
3488	else
3489	mkdir $tmp_data_catalog/${frelout[$i]}
3490	ln -f ${frelout[$i]}/* $tmp_data_catalog/${frelout[$i]}
3491	fi
3492
3493	# BATCH JOB GENERIEREN UND ABSCHICKEN; DATEI MUSS WIEDER
3494	# AUS TEMPORAEREM DATENVERZEICHNIS ENTFERNT WERDEN
3495	echo "cd $tmp_data_catalog" > archive_${frelout[$i]}
3496	if [[ $files_for_pes = false ]]
3497	then
3498	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3499	echo "rm -rf \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3500	echo "cp ${frelout[$i]} \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3501	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3502	else
3503	echo "rm -rf \$UT/${frelout[$i]}.tar" >> archive_${frelout[$i]}
3504	echo "tar cvf \$UT/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
3505	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3506	fi
3507
3508	subjob -v -c /pf/b/$usern/job_queue -d -q pp -X 0 -m 1000 -t 7200 -f $filetransfer_protocol archive_${frelout[$i]}
3509	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
3510	file_saved=true
3511
3512	else
3513	printf "\n +++ archive_system=\"$archive_system\" archiving impossible!"
3514	archive_save=false
3515	fi
3516	if [[ $file_saved = true ]]
3517	then
3518	if [[ $files_for_pes = false ]]
3519	then
3520	cat /dev/null > ${pathout[$i]}
3521	else
3522	mkdir -p ${pathout[$i]}
3523	fi
3524	fi
3525	fi
3526
3527	# APPEND AUF LOKALER MASCHINE
3528	if [[ "${actionout[$i]}" = "a" ]]
3529	then
3530	printf "\n >>> OUTPUT: ${localout[$i]} append to ${pathout[$i]}\n"
3531	cat ${localout[$i]} >> ${pathout[$i]}
3532	fi
3533
3534	# KOPIEREN AUF LOKALER MASCHINE
3535	# ES MUSS KOPIERT WERDEN, DA MOVE NICHT UEBER FILESYSTEM HINAUS MOEGLICH
3536	if [[ "${actionout[$i]}" = "" && $files_for_pes = false ]]
3537	then
3538
3539	# KOPIEREN AUF EINPROZESSORMASCHINE
3540	if [[ "${extout[$i]}" != " " && "${extout[$i]}" != "" ]]
3541	then
3542	printf "\n >>> OUTPUT: ${localout[$i]} to ${pathout[$i]}.${extout[$i]}\n"
3543	cp ${localout[$i]} ${pathout[$i]}.${extout[$i]}
3544	else
3545	printf "\n >>> OUTPUT: ${localout[$i]} to ${pathout[$i]}\n"
3546	cp ${localout[$i]} ${pathout[$i]}
3547	fi
3548
3549	elif [[ "${actionout[$i]}" = "" && $files_for_pes = true ]]
3550	then
3551
3552	# DIE DEN PROZESSOREN EINES PARALLELRECHNERS ZUGEHOERIGEN
3553	# DATEIEN WERDEN ERST IN EINEM KATALOG GESAMMELT UND DIESER
3554	# WIRD DANN KOPIERT
3555	# PER MOVE UMBENANNT WERDEN
3556	printf "\n >>> OUTPUT: ${localout[$i]}/_.... to ${pathout[$i]}\n"
3557	cp -r ${localout[$i]} ${pathout[$i]}
3558
3559	fi
3560	fi
3561	done
3562	if (( i != 0 ))
3563	then
3564	if [[ $transfer_problems = true ]]
3565	then
3566	printf "\n$striche\n *** OUTPUT-files saved"
3567	printf "\n +++ WARNING: some data transfers failed! \n"
3568	else
3569	printf "\n$striche\n *** all OUTPUT-files saved \n"
3570	fi
3571	fi
3572
3573
3574	# EVENTUELL FOLGEJOB STARTEN
3575	# DATEI CONTINUE_RUN MUSS VOM BENUTZERPROGRAMM AUS ERZEUGT WERDEN
3576	if [[ -f CONTINUE_RUN ]]
3577	then
3578
3579	if [[ $archive_save = true ]]
3580	then
3581
3582	# ZUERST IN MRUN-AUFRUF OPTIONEN FUER FORTSETZUNGSLAUF, FUER
3583	# STILLES ABARBEITEN (OHNE INTERAKTIVE RUECKFAGEN) UND FUER
3584	# BATCH-BETRIEB (NUR WICHTIG, FALLS BATCH AUF LOKALER MASCHINE
3585	# DURCHGEFUEHRT WERDEN SOLL) EINFUEGEN, FALLS NICHT BEREITS VOR-
3586	# HANDEN
3587	[[ $(echo $mc \| grep -c "\-C") = 0 ]] && mc="$mc -C"
3588	[[ $(echo $mc \| grep -c "\-v") = 0 ]] && mc="$mc -v"
3589	[[ $(echo $mc \| grep -c "\-b") = 0 ]] && mc="$mc -b"
3590	if [[ $(echo $mc \| grep -c "#") != 0 ]]
3591	then
3592	mc=`echo $mc \| sed 's/#/f/g'`
3593	fi
3594
3595
3596	# JOB STARTEN
3597	printf "\n\n *** initiating restart-run on \"$return_addres\" using command:\n"
3598	echo " $mc"
3599	printf "\n$striche\n"
3600	if [[ $localhost != $fromhost ]]
3601	then
3602
3603	if [[ $localhost = nech \|\| $localhost = ibmb \|\| $localhost = ibmh \|\| $localhost = ibms \|\| $localhost = lctit ]]
3604	then
3605	echo "*** ssh will be used to initiate restart-runs!"
3606	echo " return_addres=\"$return_addres\" "
3607	echo " return_username=\"$return_username\" "
3608	if [[ $return_addres = 172.20.25.41 ]]
3609	then
3610	# WORKAROUND AUF SCIROCCO AM TIT
3611	print "PATH=\$PATH:$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc " \| ssh $return_addres -l $return_username
3612	else
3613	ssh $return_addres -l $return_username "PATH=\$PATH:$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc "
3614	fi
3615	else
3616	printf "\n +++ no restart mechanism available for host \"$localhost\" "
3617	locat=restart; exit
3618	fi
3619
3620	# WARTEN, DAMIT SICH RESTART JOB IN QUEUE EINREIHEN KANN, BEVOR
3621	# DER AKTUELLE JOB ENDET
3622	sleep 30
3623
3624	else
3625
3626	# BEI RECHNUNGEN AUF LOKALER MASCHINE KANN MRUN DIREKT AUFGE-
3627	# RUFEN WERDEN
3628	cd $LOCAL_PWD
3629	eval $mc # ' MUESSEN AUSGEWERTET WERDEN
3630	cd - > /dev/null
3631	fi
3632	printf "\n$striche\n *** restart-run initiated \n"
3633
3634
3635	# EVENTUELL INPUT-DATEIEN, DIE VON TEMPORAEREM DATENVERZEICHNIS
3636	# GEHOLT WORDEN SIND, LOESCHEN
3637	(( i = 0 ))
3638	while (( i < iin ))
3639	do
3640	(( i = i + 1 ))
3641	if [[ "${got_tmp[$i]}" = true && $keep_data_from_previous_run = false ]]
3642	then
3643	rm -r $tmp_data_catalog/${frelin[$i]}
3644	fi
3645	done
3646
3647	else
3648
3649	printf "\n +++ no restart-run possible, since errors occured"
3650	printf "\n during the archive process"
3651	fi
3652
3653	fi
3654
3655
3656
3657	# EVTL. EMAIL-BENACHRICHTIGUNG UEBER ABGESCHLOSSENEN LAUF
3658	if [[ "$email_notification" != "" ]]
3659	then
3660
3661	if [[ $localhost != $fromhost ]]
3662	then
3663	if [[ -f CONTINUE_RUN ]]
3664	then
3665	echo "PALM restart run necessary" > email_text
3666	echo "description header of actual run:" >> email_text
3667	cat CONTINUE_RUN >> email_text
3668	echo "mrun-command to restart:" >> email_text
3669	echo "$mc" >> email_text
3670	else
3671	echo "PALM run with base filename \"$fname\" on host \"$localhost\" finished" > email_text
3672	fi
3673	mail $email_notification < email_text
3674	printf "\n *** email notification sent to \"$email_notification\" "
3675	fi
3676	fi
3677
3678
3679
3680	# ALLE ARBEITEN BEENDET. TEMPORAERER KATALOG KANN GELOESCHT WERDEN
3681	cd $HOME
3682	[[ $delete_temporary_catalog = true ]] && rm -rf $TEMPDIR
3683
3684	else
3685
3686
3687	# FALLS AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL, WERDEN JETZT ENTSPRE-
3688	# CHENDE AKTIONEN DURCHGEFUEHRT
3689
3690	# MRUN-BEFEHL FUER REMOTE-MASCHINE ZUSAMMENSTELLEN
3691	mrun_com="$mrun_script_name -a $afname -c $config_file -d $fname -f $filetransfer_protocol -h $host -H $fromhost -m $memory -t $cpumax -q $queue -R $return_addres -U $return_username -u $remote_username"
3692	[[ "$cpp_opts" != "" ]] && mrun_com=${mrun_com}" -D \"$cpp_opts\""
3693	[[ $do_compile = true ]] && mrun_com=${mrun_com}" -s \"$source_list\""
3694	[[ "$input_list" != "" ]] && mrun_com=${mrun_com}" -i \"$input_list\""
3695	[[ $ignore_archive_error = true ]] && mrun_com=${mrun_com}" -I"
3696	[[ $keep_data_from_previous_run = true ]] && mrun_com=${mrun_com}" -k"
3697	[[ "$additional_conditions" != "" ]] && mrun_com=${mrun_com}" -K \"$additional_conditions\""
3698	# [[ "$makefile" != "$source_path/Makefile" ]] && mrun_com=${mrun_com}" -M \"$makefile\""
3699	[[ "$output_list" != "" ]] && mrun_com=${mrun_com}" -o \"$output_list\""
3700	[[ "$read_from_config" = false ]] && mrun_com=${mrun_com}" -S"
3701	[[ $do_trace = true ]] && mrun_com=${mrun_com}" -x"
3702	[[ "$numprocs" != "" ]] && mrun_com=${mrun_com}" -X $numprocs"
3703	if [[ $use_openmp = true ]]
3704	then
3705	mrun_com=${mrun_com}" -O"
3706	[[ "$tasks_per_node" != "" ]] && mrun_com=${mrun_com}" -T $threads_per_task"
3707	else
3708	[[ "$tasks_per_node" != "" ]] && mrun_com=${mrun_com}" -T $tasks_per_node"
3709	fi
3710	[[ $store_on_archive_system = false ]] && mrun_com=${mrun_com}" -A"
3711	[[ $package_list != "" ]] && mrun_com=${mrun_com}" -p \"$package_list\""
3712	[[ $return_password != "" ]] && mrun_com=${mrun_com}" -P $return_password"
3713	[[ $delete_temporary_catalog = false ]] && mrun_com=${mrun_com}" -B"
3714	[[ $node_usage != default ]] && mrun_com=${mrun_com}" -n $node_usage"
3715	if [[ $do_remote = true ]]
3716	then
3717	printf "\n>>>> MRUN-command on execution host:\n>>>> $mrun_com \n"
3718	fi
3719
3720
3721	# ZUSAMMENSTELLUNG DES JOBSCRIPTS AUF DATEI jobfile
3722	jobfile=jobfile.$RANDOM
3723
3724
3725	# TEMPORAERES VERZEICHNIS GENERIEREN UND NACH DORT WECHSELN
3726	echo "mkdir $TEMPDIR" >> $jobfile
3727	echo "cd $TEMPDIR" >> $jobfile
3728
3729
3730	# EVENTUELL FEHLERVERFOLGUNG AKTIVIEREN
3731	if [[ $do_trace = true ]]
3732	then
3733	echo "set -x" >> $jobfile
3734	else
3735	echo "set +vx" >> $jobfile
3736	fi
3737
3738
3739	# ABSPEICHERN DER QUELLTEXTE (NUR FALLS UEBERSETZT WERDEN SOLL)
3740	# SOWIE GEGEBENENFALLS DES MAKEFILES
3741	if [[ $do_compile = true ]]
3742	then
3743
3744	source_catalog=SOURCES_FOR_RUN_$fname
3745
3746	# UNTERVERZEICHNIS FUER QUELLTEXTE UND MAKEFILE ANLEGEN
3747	# MRUN WIRD DIESES VRZEICHNIS UEBER ENVIRONMENT VARIABLE
3748	# MITGETEILT (UEBERSTEUERT ANGABE IN KONFIGURATIONSDATEI)
3749	echo "mkdir SOURCES_FOR_RUN_$fname" >> $jobfile
3750	echo "export SOURCES_COMPLETE=true" >> $jobfile
3751	echo "cd SOURCES_FOR_RUN_$fname" >> $jobfile
3752
3753	for filename in $source_list
3754	do
3755	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
3756	echo "cat > $filename << \"%END%\"" >> $jobfile
3757	cat $source_catalog/$filename >> $jobfile
3758	echo " " >> $jobfile
3759	echo "%END%" >> $jobfile
3760	echo " " >> $jobfile
3761	done
3762
3763	if [[ "$use_makefile" = true ]]
3764	then
3765	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
3766	echo "cat > Makefile << \"%END%\"" >> $jobfile
3767	cat $source_catalog/Makefile >> $jobfile
3768	echo " " >> $jobfile
3769	echo "%END%" >> $jobfile
3770	echo " " >> $jobfile
3771	fi
3772
3773	echo "cd - > /dev/null" >> $jobfile
3774
3775	fi
3776
3777
3778	# ABSPEICHERN DER KONFIGURATIONSDATEI
3779	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
3780	echo "cat > $config_file << \"%END%\"" >> $jobfile
3781	cat $config_file >> $jobfile
3782	echo "%END%" >> $jobfile
3783	echo " " >> $jobfile
3784
3785
3786	# ABSPEICHERN DER AKTUELLEN MRUN-VERSION
3787	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
3788	echo "cat > $mrun_script_name <<\"%END%\"" >> $jobfile
3789	cat ${mrun_path}/$mrun_script_name >> $jobfile
3790	echo "%END%" >> $jobfile
3791	if [[ $host = lctit ]]
3792	then
3793	echo "sed 's/bin\/ksh/home2\/usr5\/mkanda\/pub\/ksh/' < $mrun_script_name > mrun_new" >> $jobfile
3794	echo "mv mrun_new $mrun_script_name" >> $jobfile
3795	fi
3796	echo "chmod u+x $mrun_script_name" >> $jobfile
3797	echo "execute_mrun=true" >> $jobfile
3798	echo " " >> $jobfile
3799
3800	# EVTL. BENOETIGTE INPUT-DATEIEN PER FTP HOLEN ODER DEM JOB DIREKT
3801	# MITGEBEN UND AUF DEM REMOTE-RECHNER IM BENUTZERVERZEICHNIS ABLEGEN
3802	# FALLS DIESES NICHT EXISTIERT, WIRD VERSUCHT, DAS JEWEILS LETZTE
3803	# UNTERVERZEICHNIS DES PFADNAMENS ANZULEGEN
3804	if [[ $do_remote = true ]]
3805	then
3806	(( i = 0 ))
3807	while (( i < iin ))
3808	do
3809	(( i = i + 1 ))
3810	echo "[[ ! -d ${pathin[$i]} ]] && mkdir -p ${pathin[$i]}" >> $jobfile
3811	if [[ "${transin[$i]}" = job ]]
3812	then
3813	echo "cat > ${remotepathin[$i]} <<\"%END%\"" >> $jobfile
3814	eval cat ${pathin[$i]}/${frelin[$i]} >> $jobfile
3815	echo " " >> $jobfile
3816	echo "%END%" >> $jobfile
3817	else
3818	if [[ $filetransfer_protocol = ftp ]]
3819	then
3820	echo "ftpcopy -b -o -g -s $return_addres ${remotepathin[$i]} \"${pathin[$i]}\" ${frelin[$i]}" >> $jobfile
3821	else
3822	echo "batch_scp -b -o -g -s -u $return_username $return_addres ${remotepathin[$i]} \"${pathin[$i]}\" ${frelin[$i]}" >> $jobfile
3823	fi
3824	fi
3825
3826	# UEBERPRUEFEN, OB DATEI ANGELEGT WERDEN KONNTE
3827	echo "if [[ \$? = 1 ]]" >> $jobfile
3828	echo "then" >> $jobfile
3829	echo " echo \" \" " >> $jobfile
3830	echo " echo \"+++ file ${remotepathin[$i]} could not be created\" " >> $jobfile
3831	echo " echo \" please check, if directory exists on $host!\" " >> $jobfile
3832	echo " echo \"+++ MRUN will not be continued\" " >> $jobfile
3833	echo " execute_mrun=false" >> $jobfile
3834	echo "fi" >> $jobfile
3835	done
3836	fi
3837
3838	# ARBEITSKATALOG AUF DER LOKALEN MASCHINE FUER EVENTUELLE
3839	# FORTSETZUNGSLAUEFE PER ENV-VARIABLE UEBERGEBEN
3840	echo "LOCAL_PWD=$working_directory" >> $jobfile
3841	echo "export LOCAL_PWD" >> $jobfile
3842
3843	# EBENSO LOKALEN MRUN-KATALOG UEBERGEBEN
3844	echo "LOCAL_MRUN_PATH=$mrun_path" >> $jobfile
3845	echo "export LOCAL_MRUN_PATH" >> $jobfile
3846
3847	# echo "for_subjob_to_do=\"rm -rf $TEMPDIR\" " >> $jobfile
3848
3849	# MRUN AUF ZIELRECHNER AUFRUFEN
3850	echo "set -x" >> $jobfile
3851	echo "[[ \$execute_mrun = true ]] && ./$mrun_com" >> $jobfile
3852
3853	echo 'ls -al; echo `pwd`' >> $jobfile
3854	echo "cd \$HOME" >> $jobfile
3855	echo "rm -rf $TEMPDIR" >> $jobfile
3856
3857
3858
3859
3860	# JOB PER SUBJOB STARTEN
3861	if [[ $silent = false ]]
3862	then
3863	printf "\n "
3864	else
3865	printf "\n\n"
3866	fi
3867
3868	subjob $job_on_file -h $host -u $remote_username -q $queue -m $memory -N $node_usage -t $cpumax $XOPT $TOPT $OOPT -n $fname -f $filetransfer_protocol -v $jobfile
3869	rm -rf $jobfile
3870
3871
3872	fi # ENDE REMOTE-TEIL
3873
3874
3875
3876	# ENDE DER PROZEDUR

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