Home

Context Navigation

source: palm/trunk/SCRIPTS/mrun @ 67

Last change on this file since 67 was 67, checked in by raasch, 17 years ago
small adjustments for fimm
Property svn:keywords set to `Rev`
File size: 147.8 KB

Line
1	#!/bin/ksh
2
3	##!/home/DSRC/NC/tatuyama/pub/ksh NEEDED ON NEC AT RIAM !!!!!!!!!!
4
5	# mrun - Plot-Shellskript
6	# $Id: mrun 61 2007-03-12 05:42:06Z raasch $
7
8	# Prozedur zum Starten von Modellaeufen
9
10	# letzte Aenderung:
11	# 03/03/94 - Siggi - Entwicklungsbeginn
12	# 21/03/94 - Siggi - Entwicklungsabschluss (Version 1.0)
13	# 09/12/94 - Siggi - allexport unterbunden; statt dessen werden jetzt ein-
14	# zelne Variable exportiert. Dies ist noetig, weil an-
15	# sonsten irgendein Speicher ueberlaeuft und von mrun
16	# aufgerufene Programme (z.B. stageout) mit Fehlern
17	# abbrechen (too many arguments)
18	# 20/06/95 - Siggi - noclobber muss explizit abgeschaltet, da jetzt
19	# defaultmaessig im RRZN-Profile eingeschaltet
20	# 10/06/97 - Siggi - Zusaetzliche Option -C bei cpp, damit // nicht
21	# wegfallen
22	# 25/04/00 - Siggi - Version 1.5
23	# remote_addres und remote_user in return_addres bzw.
24	# return_username umbenannt, return_username wird dem
25	# mrun-Aufruf im Job ueber Option -U mitgegeben.
26	# Neue Variable remote_username, die beim interaktiven
27	# mrun-Aufruf zwingend ueber die neue Option -u oder
28	# in der Konfigurationsdatei angegeben werden muss.
29	# 08/02/01 - Siggi - Alle mrun-Meldungen ins englische uebersetzt,
30	# Version 1.7
31	# 05/05/02 - Siggi - Uebersetzungen mittels make-Mechanismus moeglich
32	# 21/11/02 - Siggi - ENV-Variable XLFRTEOPTS wird vor Ausfuehrung auf
33	# IBM gesetzt, um Record-Laenge der NAMELIST-Dateien,
34	# zu bestimmen; Praeprozessoroptionen haben nun alle
35	# die Form -Dtext=text, weil auf IBM sonst text durch
36	# die leere Zeichenkette ersetzt wird
37	# 01/08/03 - Siggi - Test of implementing dvrp+1PE on ibm
38	# 07/01/04 - Siggi - additional preprocessor directive for ibm included
39	# (-D$OMP=OMP) in order to avoid problems with
40	# OMP_NUM_THREADS
41	# 04/01/05 - Siggi - archiving on hanni and berni is done in separate
42	# tar files, one for each node used
43	# 07/01/04 - Siggi - old code for t3e, vpp and hpcs eliminated
44	# 09/01/05 - Siggi - workaround for getting the IP address on gfdl3
45	# 17/01/05 - Siggi - job for data transfer to local machine now within
46	# job class c1 (HLRN)
47	# 27/01/05 - Siggi - IP address workaround for gfdl3 removed
48	# 28/01/05 - Siggi - tar-filenames on $PERM (HLRN) now include the
49	# base filename and cycle number
50	# 16/02/05 - Gerald - hababai validated
51	# 14/03/05 - Siggi - abort on NEC after first runtime error (F_ERRCNT)
52	# 29/03/05 - Marcus - berni*-en0 validated
53	# 21/04/05 - Siggi - transfer-job-protocol for avs-data is no more stored
54	# 24/04/05 - Siggi - netcdf support on lcmuk
55	# 25/04/05 - Siggi - netcdf support on gfld3 (decalpha)
56	# 11/05/05 - Siggi - files with non-numeric extensions (.xxx after cycle
57	# number) can now be used within interactive runs
58	# 12/05/05 - Siggi - netcdf support on ibm
59	# 13/05/05 - Siggi - error in tar-filenames on $PERM (HLRN) removed
60	# 18/05/05 - Siggi - netcdf support on nec
61	# 24/05/05 - Siggi - netcdf support on ibms
62	# 14/06/05 - Siggi - sleep interval after submit of restart job increased
63	# to 30 seconds
64	# 28/06/05 - Siggi - bora adjusted to new intel compiler (LD_LIBRARY_
65	# PATH is temporarily set)
66	# 07/09/05 - Siggi - setting of MP_EAGER_LIMIT switched off because it
67	# caused warnings in the job protocol
68	# 20/10/05 - Siggi - update of netcdf-version on decalpha (gfdl3)
69	# 25/10/05 - Siggi - error in listing files for getting the cycle number
70	# removed
71	# 26/10/05 - Siggi - new paths for dvrp-library, transfer of catalogs
72	# realized by file attribute trpe
73	# 28/10/05 - Siggi - if existing, the file extension is output in case
74	# of missing input file - no job abort in case of
75	# missing input files with file extensions
76	# (preliminary solution)
77	# 31/10/05 - Siggi - data transfer from nech now within seperate job
78	# 04/11/05 - Siggi - netcdf 3.6.0-p1 on ibmh/ibmb
79	# 07/12/05 - Siggi - gallego and elephanta admitted
80	# 30/12/05 - Siggi - gfdl5 (ibmy) admitted
81	# 10/01/06 - Siggi - cpp directive for NetCDF 64bit support
82	# 20/01/06 - Siggi - cpp directive for ibmy
83	# 09/02/06 - Siggi - ibmy admitted for batch mode
84	# 13/04/06 - Siggi - ostria admitted
85	# 18/04/06 - Siggi - usage of OpenMP implemented (additional option -O)
86	# 10/05/06 - Siggi - environment variable XLSMPOPTS set on IBM for
87	# optimization of OpenMP runs (option stacksize is
88	# necessary for large gridpoint numbers because
89	# otherwise a segmentation fault occurs)
90	# 23/05/05 - Siggi - lctit (SUN Fire X4600) admitted
91	# 21/08/06 - Siggi - standard mrun path on scirocco is as on bora
92	# 23/08/06 - Siggi - netcdf support for scirocco (notebook)
93	# 20/09/06 - Marcus - add DVRP library on nech
94	# 24/10/06 - Siggi - Environment variables for PALM steering are written
95	# on local NAMELIST file ENVPAR
96	# 24/11/06 - Siggi - levanto admitted, maestro switched to ifc 9.1
97	# 28/11/06 - Siggi - call to interpret_config.x_levanto because of SuSe 10
98	# 06/02/07 - Siggi - add DVRP library on lcmuk
99	# 07/02/07 - Siggi - revision of source code handling, source code is
100	# now expected in directory given by source_path and
101	# not in the current working directory, source code
102	# files provided in add_source_path are allways
103	# compiled, source code to be compiled is allways
104	# sampled in SOURCES_FOR_RUN_$fname which is a
105	# subdirectory of the current working directory,
106	# -s TEST changed to -s WRITE_PERMIT or -s WP,
107	# adapted for RIAM (neck)
108	# bugfix for cycle number of output file (extout)
109	# all hpmuk-related code removed
110	# 14/02/07 - Siggi - dvrp support for neck added
111	# 28/02/07 - Siggi - empty lines in configuration file are accepted
112	# mrun_path replaced by PALM_BIN,
113	# all machines are calling interpret_config.x
114	# 14/03/07 - Siggi - fimm admitted, revision number added to terminal
115	# output
116
117
118
119
120	# VARIABLENVEREINBARUNGEN + DEFAULTWERTE
121
122	set +o allexport # SICHERHEITSHALBER UNTERBINDEN, DA SONST EVTL. STAGEOUT
123	# NICHT LAUEFT (TOO MANY ARGUMENTS - PROBLEM)
124	set +o noclobber # EXISTIERENDE DATEIEN DUERFEN UEBERSCHRIEBEN WERDEN
125
126	AddFilenames=""
127	additional_conditions=""
128	add_source_path=""
129	afname=""
130	archive_save=true
131	archive_system=none
132	compiler_name=""
133	cond1=""
134	cond2=""
135	config_file=.mrun.config
136	cpp_opts=""
137	cpumax=0
138	cpurest=0
139	delete_temporary_catalog=true
140	do_batch=false
141	do_compile=true
142	do_remote=false
143	do_stagein=true
144	do_stageout=true
145	do_trace=false
146	email_notification=""
147	exclude=""
148	executable=""
149	execution_error=false
150	filetransfer_protocol=""
151	fimm=false
152	fname=test
153	fromhost=""
154	host=""
155	host_file=""
156	hp=""
157	ignore_archive_error=false
158	input_list=""
159	interpreted_config_file=""
160	job_on_file=""
161	keep_data_from_previous_run=false
162	localhost_realname=$(hostname)
163	local_compile=false
164	locat=normal
165	mainprog=""
166	makefile=""
167	mc=$0
168	while [[ $(echo $mc \| grep -c "/") != 0 ]]
169	do
170	mc=`echo $mc \| cut -f2- -d"/"`
171	done
172	module_files=""
173	MODULE_OPTIONS=""
174	mrun_script_name=$mc
175	netcdf_support=false
176	node_usage=default
177	numprocs=""
178	OOPT=""
179	openmp=false
180	output_list=""
181	package_list=""
182	punkte="..........................................................."
183	queue=none
184	read_from_config=""
185	restart_run=false
186	return_addres=$(nslookup `hostname` 2>&1 \| grep "Address:" \| tail -1 \| awk '{print $2}')
187	if [[ $return_addres = 130.75.105.158 ]]
188	then
189	return_addres=172.20.25.41
190	echo "+++ WARNING: return_addres changed to $return_addres !!!!!"
191	fi
192	# if [[ $return_addres = 210.117.65.1 ]]
193	# if [[ $(nslookup `hostname` 2>&1 \| grep -c 210.117.65.1) = 1 ]]
194	# then
195	# [[ $localhost_realname = gfdl3.yonsei.ac.kr ]] && return_addres=165.132.26.56
196	# fi
197	return_password=""
198	return_username=$LOGNAME
199	remotecall=false
200	remote_username=""
201	run_mode=""
202	scirocco=false
203	store_on_archive_system=true
204	striche=" ----------------------------------------------------------------------------"
205	silent=false
206	source_list=""
207	source_path=SOURCE
208	tasks_per_node=""
209	threads_per_task=1
210	tmpcreate=false
211	tmp_data_catalog=""
212	transfer_problems=false
213	usern=$LOGNAME
214	use_makefile=""
215	working_directory=`pwd`
216	TOPT=""
217	XOPT=""
218	zeit=$( date \| cut -c 12-19 )
219
220	typeset -i iec=0 iic=0 iin=0 ioc=0 iout=0 memory=0 stagein_anz=0 stageout_anz=0
221	typeset -i cputime i ii icycle inode ival jobges jobsek maxcycle minuten nodes pes sekunden tp1
222
223	typeset -R30 calltime
224	typeset -L20 spalte1
225	typeset -L40 spalte2
226	typeset -L60 spalte3
227	typeset -L35 string1=`date`
228	typeset -L12 string2=$usern
229	typeset -L12 string3=$localhost_realname
230	typeset -L12 string4
231	typeset -L12 string5
232	typeset -L30 version="MRUN 2.0 Rev$Rev: 67 $"
233
234
235
236	# EINZELNE VARIABLE FUER HAUPTPROGRAMM EXPORTIEREN
237	export cpurest fname host localhost return_addres return_username remotecall tasks_per_node
238
239	# FOLGENDE VARIABLEN MUESSEN FUER DIE INTERPRETATION DER KONFIGURATIONSDATEI
240	# EXPORTIERT WERDEN
241	export afname config_file cpp_opts cpumax do_batch do_trace fname fromhost
242	export input_list memory numprocs output_list queue run_mode
243
244
245
246	# FEHLERBEHANDLUNG
247	# BEI EXIT:
248	trap 'if [[ $locat != localhost ]]
249	then
250	# if [[ ! -f ${mrun_path}/statistik/mrun_statistik ]]
251	# then
252	# cat > ${mrun_path}/statistik/mrun_statistik << %STATEND%
253	#MRUN-calls on $localhost
254	#
255	#date and time user localhost remotehost termination mrun-command
256	#--------------------------------------------------------------------------------------------------------------------
257	#%STATEND%
258	# chmod 666 ${mrun_path}/statistik/mrun_statistik
259	# fi
260	#
261	# # EINTRAG IN DIE STATISTIK-DATEI
262	# string4=$host
263	# string5=$locat
264	# if [[ "$job_on_file" = "" && $locat != control_c && $locat != user_abort ]]
265	# then
266	# if [[ $do_batch = true ]]
267	# then
268	# printf "$string1$string2$string3$string4$string5$mrun_com \n" >> ${mrun_path}/statistik/mrun_statistik
269	# else
270	# printf "$string1$string2$string3$string4$string5$mc \n" >> ${mrun_path}/statistik/mrun_statistik
271	# fi
272	# fi
273	continue
274	fi
275
276	if [[ $locat != normal && $locat != control_c && $locat != local_compile ]]
277	then
278
279	# EVENTUELLE ERROR-KOMMANDOS ABARBEITEN
280	(( i = 0 ))
281	while (( i < iec ))
282	do
283	(( i = i + 1 ))
284	printf "\n *** Execution of ERROR-command:\n"
285	printf " >>> ${err_command[$i]}\n"
286	eval ${err_command[$i]}
287	done
288	if [[ -n $interpreted_config_file ]] then
289	rm -rf $interpreted_config_file
290	fi
291	if [[ $tmpcreate = true ]]
292	then
293	printf "\n *** Contents of \"$TEMPDIR\":\n"
294	ls -al; cd
295	[[ $delete_temporary_catalog = true ]] && rm -rf $TEMPDIR
296	fi
297	if [[ -f ~/job_queue/JOBINFO.$QSUB_REQID ]]
298	then
299	rm -rf ~/job_queue/JOBINFO.$QSUB_REQID
300	fi
301	printf "\n\n+++ MRUN killed \n\n"
302	elif [[ $locat != control_c ]]
303	then
304	printf "\n\n --> all actions finished\n\n"
305	printf " Bye, bye $usern !!\n\n"
306	fi' exit
307
308
309	# BEI TERMINAL-BREAK:
310	trap '[[ $tmpcreate = true ]] && (cd; rm -rf $TEMPDIR)
311	if [[ -f ~/job_queue/JOBINFO.$QSUB_REQID ]]
312	then
313	rm -rf ~/job_queue/JOBINFO.$QSUB_REQID
314	fi
315	printf "\n+++ MRUN killed by \"^C\" \n\n"
316	locat=control_c
317	exit
318	' 2
319
320
321	# CHECK IF THE PATH FOR THE PALM BINARIES (SCRIPTS+UTILITY-PROGRAMS) HAS
322	# BEEN SET
323	if [[ "$PALM_BIN" = "" ]]
324	then
325	printf "\n +++ environment variable PALM_BIN has not been set"
326	printf "\n please set it to the directory where the PALM scripts are located"
327	locat=palm_bin; exit
328	fi
329
330
331	# EVTL. NAMEN DES LOKALEN RECHNERS MIT UEBERGREIFENDEM NAMEN VERSEHEN
332	case $localhost_realname in
333	(atmos) localhost=lcide;;
334	(bora\|breva\|elephanta\|gallego\|gregale\|hababai\|irifi\|levanto\|maestro\|orkan\|ostria\|poniente\|quanero\|scirocco\|vorias) localhost=lcmuk;;
335	(breg-en0\|berni-en0) localhost=ibmb; archive_system=tivoli;;
336	(cs*) localhost=nech; archive_system=ut;;
337	(fimm.bccs.uib.no) local_host=lcmuk;;
338	(gate\|n-sx) PATH=$PALM_BIN:$PATH:/usr/bin/nqsII; localhost=neck;;
339	(ground.yonsei.ac.kr) localhost=decalpha;;
340	(gfdl3.yonsei.ac.kr) localhost=decalpha;;
341	(gfdl5) localhost=ibmy;;
342	(hreg-en0\|hanni-en0) localhost=ibmh; archive_system=tivoli;;
343	(nobel*) localhost=ibms;;
344	(sun1\|sun2) localhost=unics;;
345	(tgg*) localhost=lctit;;
346	(*) printf "\n +++ Host \"$localhost_realname\" not admitted for mrun \n"
347	locat=localhost; exit;;
348	esac
349
350	[[ $localhost_realname = scirocco ]] && scirocco=true
351	[[ $localhost_realname = fimm.bccs.uib.no ]] && fimm=true
352
353
354
355	# SHELLSCRIPT-OPTIONEN EINLESEN UND KOMMANDO NEU ZUSAMMENSETZEN, FALLS ES
356	# FUER FOLGEJOBS BENOETIGT WIRD
357	while getopts :a:AbBc:Cd:D:f:Fh:H:i:IkK:m:M:n:o:Op:P:q:r:R:s:St:T:u:U:vxX: option
358	do
359	case $option in
360	(a) afname=$OPTARG;;
361	(A) store_on_archive_system=false; mc="$mc -A";;
362	(b) do_batch=true; mc="$mc -b";;
363	(B) delete_temporary_catalog=false; mc="$mc -B";;
364	(c) config_file=$OPTARG; mc="$mc -c$OPTARG";;
365	(C) restart_run=true; mc="$mc -C";;
366	(d) fname=$OPTARG; mc="$mc -d$OPTARG";;
367	(D) cpp_opts="$cpp_opts $OPTARG"; mc="$mc -D$OPTARG";;
368	(f) filetransfer_protocol=$OPTARG; mc="$mc -f$OPTARG";;
369	(F) job_on_file="-D"; mc="$mc -F";;
370	(h) host=$OPTARG; mc="$mc -h$OPTARG";;
371	(H) fromhost=$OPTARG; mc="$mc -H$OPTARG";;
372	(i) input_list=$OPTARG; mc="$mc -i'$OPTARG'";;
373	(I) ignore_archive_error=true; mc="$mc -I";;
374	(k) keep_data_from_previous_run=true; mc="$mc -k";;
375	(K) additional_conditions="$OPTARG"; mc="$mc -K$OPTARG";;
376	(m) memory=$OPTARG; mc="$mc -m$OPTARG";;
377	(M) makefile=$OPTARG; mc="$mc -M$OPTARG";;
378	(n) node_usage=$OPTARG; mc="$mc -n$OPTARG";;
379	(o) output_list=$OPTARG; mc="$mc -o'$OPTARG'";;
380	(O) use_openmp=true; mc="$mc -O";;
381	(p) package_list=$OPTARG; mc="$mc -p'$OPTARG'";;
382	(P) return_password=$OPTARG; mc="$mc -P$OPTARG";;
383	(q) queue=$OPTARG; mc="$mc -q$OPTARG";;
384	(r) run_mode=$OPTARG; mc="$mc -r'$OPTARG'";;
385	(R) remotecall=true;return_addres=$OPTARG; mc="$mc -R$OPTARG";;
386	(s) source_list=$OPTARG; mc="$mc -s'$OPTARG'";;
387	(S) read_from_config=false; mc="$mc -S";;
388	(t) cpumax=$OPTARG; mc="$mc -t$OPTARG";;
389	(T) tasks_per_node=$OPTARG; mc="$mc -T$OPTARG";;
390	(u) remote_username=$OPTARG; mc="$mc -u$OPTARG";;
391	(U) return_username=$OPTARG; mc="$mc -U$OPTARG";;
392	(v) silent=true; mc="$mc -v";;
393	(x) do_trace=true;set -x; mc="$mc -x";;
394	(X) numprocs=$OPTARG; mc="$mc -X$OPTARG";;
395	(\?) printf "\n +++ unknown option $OPTARG \n"
396	printf "\n --> type \"$0 ?\" for available options \n"
397	locat=parameter;exit;;
398	esac
399	done
400
401
402	# EVTL. POSITIONSPARAMETER EINLESEN
403	# ZUR ZEIT GIBT ES NUR DEN PARAMETER ? (=KURZINFO)
404	shift OPTIND-1
405
406
407	# KURZE AUFRUFBESCHREIBUNG WIRD HIER AUSGEGEBEN
408	if [[ "$1" = "?" ]]
409	then
410	(printf "\n *** mrun can be called as follows:\n"
411	printf "\n $mrun_script_name -b -c.. -d.. -D.. -f.. -F -h.. -i.. -I -K.. -m.. -o.. -p.. -r.. -R -s.. -t.. -T.. -v -x -X.. <modus>\n"
412	printf "\n Description of available options:\n"
413	printf "\n Option Description Default-Value"
414	printf "\n -a base name of input files equiv. -d"
415	printf "\n -A no archiving when using file-attribute fl"
416	printf "\n -b batch-job on local machine ---"
417	printf "\n -B do not delete temporary directory at end ---"
418	printf "\n -c configuration file .mrun.config"
419	printf "\n -d base name of files attached to program test"
420	printf "\n -D preprocessor(cpp)-directives \"\" "
421	printf "\n -f filetransfer protocol (ftp or scp) depending on -h"
422	printf "\n -F create remote job file only ---"
423	printf "\n -h execution host $localhost_realname"
424	printf "\n -i INPUT control list \"\" "
425	printf "\n -I archiving errors of previous batch-jobs"
426	printf "\n will be ignored"
427	printf "\n -k keep data from previous run"
428	printf "\n -K additional conditions for controling"
429	printf "\n usage of conditional code and"
430	printf "\n env-variables in configuration file \"\" "
431	printf "\n -m memory demand in MB (batch-jobs) 0 MB"
432	printf "\n -M Makefile name Makefile"
433	printf "\n -n node usage (shared/not_shared) depending on -h"
434	printf "\n -o OUTPUT control list \"\" "
435	printf "\n -O use OpenMP ---"
436	printf "\n -p software package list \"\" "
437	printf "\n -q queue \"$queue\" "
438	printf "\n -r run control list (combines -i -o) \"\" "
439	printf "\n -s filenames of routines to be compiled \"\" "
440	printf "\n must end with .f, .f90, .F, or .c !"
441	printf "\n use \"..\" for more than one file and wildcards"
442	printf "\n -s TEST compiles all files with w-permit"
443	printf "\n -S config file interpreted by shellscript ---"
444	printf "\n -t allowed cpu-time in seconds (batch) 0"
445	printf "\n -T tasks per node depending on -h"
446	printf "\n -u username on remote machine \"\" "
447	printf "\n -v no prompt for confirmation ---"
448	printf "\n -x tracing of mrun for debug purposes ---"
449	printf "\n -X # of processors (on parallel machines) 1"
450	printf "\n "
451	printf "\n Possible values of positional parameter <modus>:"
452	printf "\n \"?\" - this outline \n\n") \| more
453	exit
454	elif [[ "$1" != "" ]]
455	then
456	printf "\n +++ positional parameter $1 unknown \n"
457	locat=parameter; exit
458	fi
459
460
461
462	# KURZE STARTMELDUNG
463	printf "\n*** $version "
464	printf "\n will be executed. Please wait ..."
465
466
467	# BASISNAME DER INPUT-DATEIEN GLEICH ALLGEMEINEM BASISNAMEN SETZEN,
468	# WENN NICHT VOM BENUTZER ANDERS BESTIMMT
469	[[ "$afname" = "" ]] && afname=$fname
470
471
472	# EVTL. RUN-MODUS DEN I/O-LISTEN HINZUFUEGEN
473	if [[ "$run_mode" != "" ]]
474	then
475	input_list="$input_list $run_mode"
476	output_list="$output_list $run_mode"
477	fi
478
479
480	# RECHNERNAMEN ABSPEICHERN, VON DEM AUS JOB GESTARTET WIRD,
481	# ALLERDINGS NUR DANN, WENN NICHT PER OPTION -H BEREITS EIN WERT
482	# ZUGEWIESEN WURDE (MRUN MACHT DIES IMMER, WENN ES SELBST BATCH-JOBS
483	# STARTET)
484	if [[ "$fromhost" = "" ]]
485	then
486	fromhost=$localhost
487	fi
488
489
490	# PRUEFEN, OB MRUN NUR TESTWEISE AUF DER LOKALEN MASCHINE KOMPILIEREN SOLL
491	if [[ "$source_list" = LOCAL_COMPILE_TEST ]]
492	then
493	source_list=TEST
494	local_compile=true
495	host=$localhost
496	fi
497
498
499	# PRUEFEN, OB AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL
500	# WERT VON do_remote WIRD FUER DATEIVERBINDUNGEN BENOETIGT.
501	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
502	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
503	if [[ -n $host && "$host" != $localhost ]]
504	then
505	do_batch=true
506	do_remote=true
507	case $host in
508	(ibm\|ibmb\|ibmh\|ibms\|ibmy\|nech\|neck\|lctit\|unics) true;;
509	(*) printf "\n"
510	printf "\n +++ execution host \"$host\" not admitted for MRUN,"
511	printf "\n or NQS not available on execution host!"
512	locat=nqs; (( iec = 0 )); exit;;
513	esac
514	else
515	host=$localhost
516	fi
517
518
519	# ZUSATZBEDINGUNGEN (OPTION -K) AUSWERTEN
520	if [[ -n $additional_conditions ]]
521	then
522	echo $additional_conditions \| cut -d" " -f1-3 \| read cond1 cond2 dummy
523	# cond1=`echo $additional_conditions \| cut -d" " -f1`
524	# cond2=`echo $additional_conditions \| cut -d" " -s -f2`
525	# dummy=`echo $additional_conditions \| cut -d" " -s -f3`
526	if [[ -n $dummy ]]
527	then
528	printf "\n +++ more than 2 additional conditions given for Option \"-K\""
529	locat=options; exit
530	fi
531	fi
532
533
534	# PRUEFEN, OB EVTL. BEI VORHERGEHENDEM LAUF (KETTENJOB) EINE
535	# ARCHIVIERUNG FEHLGESCHLAGEN IST
536	if [[ -f ~/job_queue/ARCHIVE_ERROR_$fname ]]
537	then
538	if [[ $ignore_archive_error = false ]]
539	then
540	printf "\n +++ data archiving of previous run failed"
541	printf "\n see directory \~/job_queue on remote machine"
542	locat=archive; exit
543	else
544	printf "\n +++ warning: data archiving in a previous run failed"
545	printf "\n MRUN continues, trying to get backup copy"
546	fi
547	fi
548
549
550	# PRUEFEN, OB KONFIGURATIONS-DATEI VORHANDEN
551	if [[ ! -f $config_file ]]
552	then
553	printf "\n\n +++ configuration file: "
554	printf "\n $config_file"
555	printf "\n does not exist"
556	locat=connect; exit
557	fi
558
559
560
561	# LESEN UND INTERPRETIEREN DER KONFIGURATIONS-DATEI VOM SHELLSCRIPT AUS
562	# VORUEBERGEHEND ZWINGEND AUF LINUX-RECHNERN
563	if [[ "$read_from_config" = false ]]
564	then
565
566	[[ $silent = false ]] && printf "\n Reading the configuration file... "
567	while read zeile
568	do
569	[[ $silent = false ]] && printf "."
570
571
572	# ZUERST EVENTUELL VORKOMMENDE ENVIRONMENT-VARIABLEN DURCH IHRE WERTE
573	# ERSETZEN
574	eval zeile=\"$zeile\"
575
576
577	# INTERPRETATION DER ZEILE
578	if [[ "$(echo $zeile)" = "" ]]
579	then
580	# LEERZEILE, KEINE AKTION
581	continue
582
583	elif [[ "$(echo $zeile \| cut -c1)" = "#" ]]
584	then
585
586	# ZEILE IST KOMMENTARZEILE
587	true
588
589	elif [[ "$(echo $zeile \| cut -c1)" = "%" ]]
590	then
591
592	# ZEILE DEFINIERT ENVIRONMENT-VARIABLE
593	zeile=$(echo $zeile \| cut -c2-)
594	echo $zeile \| cut -d" " -f1-5 \| read var value for_host for_cond1 for_cond2
595	# var=`echo $zeile \| cut -d" " -f1`
596	# value=`echo $zeile \| cut -d" " -s -f2`
597	# for_host=`echo $zeile \| cut -d" " -s -f3`
598	# for_cond1=`echo $zeile \| cut -d" " -s -f4`
599	# for_cond2=`echo $zeile \| cut -d" " -s -f5`
600
601	if [[ "$for_host" = "" \|\| ( "$for_host" = $host && "$for_cond1" = "$cond1" && "$for_cond2" = "$cond2" ) \|\| $(echo "$input_list$output_list"\|grep -c "$for_host") != 0 ]]
602	then
603
604	# BEI COMPILER- CPP- ODER LINKEROPTIONEN EVTL ":" DURCH " "
605	# ERSETZEN. "::" WIRD DURCH ":" ERSETZT.
606	value=`echo $value \| sed 's/::/%DUM%/g' \| sed 's/:/ /g' \| sed 's/%DUM%/:/g'`
607
608
609	# ENVIRONMENT-VARIABLE WIRD WERT AUS KONFIGURATIONSDATEI
610	# ZUGEWIESEN, WENN SIE SELBST NOCH KEINEN WERT UEBER DIE
611	# ENTSPRECHENDE SCRIPT-OPTION ERHALTEN HAT. SOLCHE
612	# VARIABLEN HAETTEN DANN DEN WERT "" ODER IM INTEGER-FALL DEN
613	# WERT 0. ALLGEMEINE REGEL ALSO: SCRIPT-OPTION GEHT UEBER
614	# KONFIGURATIONSDATEI
615	if [[ "$(eval echo \$$var)" = "" \|\| "$(eval echo \$$var)" = "0" ]]
616	then
617	eval $var=\$value
618
619	# EVTL. BILDSCHIRMAUSGABEN DER ENVIRONMENT-VARIABLEN
620	if [[ $do_trace = true ]]
621	then
622	printf "\n*** ENVIRONMENT-VARIABLE $var = $value"
623	fi
624	fi
625
626	# WENN ENVIRONMENT-VARIABLE HOST VEREINBART, DANN SOFORT AUSWERTEN
627	# WERT VON do-remote WIRD BEI DATEIVERBINDUNGEN BENOETIGT
628	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
629	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
630	if [[ $var = host ]]
631	then
632	if [[ -n $host && "$host" != $localhost ]]
633	then
634	do_batch=true
635	do_remote=true
636	case $host in
637	(ibm\|ibms\|ibmy\|lctit\|nech\|neck\|unics) true;;
638	(*) printf "\n +++ no queueing system available on execution host \"$host\""
639	locat=nqs; exit;;
640	esac
641	else
642	host=$localhost
643	fi
644	fi
645
646	# VOM BENUTZER DEFINIERTE ENVIRONMENT VARIABLEN MUESSEN PRINZIPIELL
647	# EXPORTIERT WERDEN, DA SIE VIELLEICHT IN WEITER UNTEN AUFZURUFEN-
648	# DEN PROGRAMMEN BENOETIGT WERDEN
649	export $var
650	fi
651
652
653
654
655	elif [[ "$(echo $zeile \| cut -c1-3)" = "EC:" ]]
656	then
657
658	# ZEILE DEFINIERT ERROR-KOMMANDO
659	(( iec = iec + 1 ))
660	zeile=$(echo $zeile \| cut -c4-)
661	err_command[$iec]="$zeile"
662
663	elif [[ "$(echo $zeile \| cut -c1-3)" = "IC:" ]]
664	then
665
666	# ZEILE DEFINIERT INPUT-KOMMANDO
667	(( iic = iic + 1 ))
668	zeile=$(echo $zeile \| cut -c4-)
669	in_command[$iic]="$zeile"
670
671	elif [[ "$(echo $zeile \| cut -c1-3)" = "OC:" ]]
672	then
673
674	# ZEILE DEFINIERT OUTPUT-KOMMANDO
675	(( ioc = ioc + 1 ))
676	zeile=$(echo $zeile \| cut -c4-)
677	out_command[$ioc]="$zeile"
678
679	else
680
681	# ZEILE DEFINIERT DATEIVERBINDUNG. EINLESEN DER DATEIEIGENSCHAFTEN
682	# s2a: in/out - Feld
683	# s2b: loc - Feld (optional)
684	# s2c: tr/ar - Feld (optional)
685	echo $zeile \| cut -d" " -f1-2 \| read s1 s2
686	# s1=`echo $zeile \| cut -d" " -f1`
687	# s2=`echo $zeile \| cut -d" " -s -f2`
688	s2a=$(echo $s2 \| cut -d":" -f1)
689	if [[ $(echo $s2 \| grep -c ":") = 0 ]]
690	then
691	s2b=""
692	s2c=""
693	else
694	echo $s2 \| cut -d":" -f2-3 \| sed 's/:/ /g' \| read s2b s2c
695	# s2b=`echo $s2 \| cut -d":" -f2 \| sed 's/:/ /g'`
696	# s2c=`echo $s2 \| cut -d":" -s -f3 \| sed 's/:/ /g'`
697	fi
698	echo $zeile \| cut -d" " -f3-6 \| read s3 s4 s5 s6
699	# s3=`echo $zeile \| cut -d" " -f3`
700	# s4=`echo $zeile \| cut -d" " -s -f4`
701	# s5=`echo $zeile \| cut -d" " -s -f5`
702	# s6=`echo $zeile \| cut -d" " -s -f6`
703
704
705	# ABSPEICHERN DER DATEIVERBINDUNG, FALLS IN INPUT- ODER OUTPUT-LIST
706	# VERMERKT. VARIABLE S3 KANN AUCH LISTE ENTHALTEN (FELDTRENNER ":")
707	# DATEIVERBINDUNG WIRD DANN NICHT ABGESPEICHERT UND GEPRUEFT, WENN
708	# PROGRAMMLAUF AUF REMOTE-MASCHINE ERFOLGT UND DATEI NUR LOKAL VOR-
709	# HANDEN SEIN MUSS (D.H. s2b = loc)
710	IFSALT="$IFS"; IFS="$IFS:"
711	if [[ "$s2a" = in && ! ( $do_remote = true && ( "$s2b" = loc \|\| "$s2b" = locopt ) ) ]]
712	then
713	found=false
714	for actual in $input_list
715	do
716	for formal in $s3
717	do
718	[[ $actual = $formal \|\| "$formal" = "-" ]] && found=true
719	done
720	done
721	if [[ $found = true ]]
722	then
723	(( iin = iin + 1 ))
724	localin[$iin]=$s1; transin[$iin]=$s2b; actionin[$iin]=$s2c;
725	typein[$iin]=$s3; pathin[$iin]=$s4; endin[$iin]=$s5;
726	extin[$iin]=$s6
727	fi
728	elif [[ "$s2a" = out && ! ( $do_remote = true && "$s2b" = loc ) ]]
729	then
730	found=false
731	for actual in $output_list
732	do
733	for formal in $s3
734	do
735	[[ $actual = $formal \|\| "$formal" = "-" ]] && found=true
736	done
737	done
738	if [[ $found = true ]]
739	then
740	(( iout = iout + 1 ))
741	localout[$iout]=$s1; actionout[$iout]=$s2c; typeout[$iout]=$s3;
742	pathout[$iout]=$s4; endout[$iout]=$s5; extout[$iout]=$s6
743	fi
744	elif [[ "$s2a" != in && "$s2a" != out ]]
745	then
746	printf "\n +++ I/O-attribute in configuration file $config_file has the invalid"
747	printf "\n value \"$s2\". Only \"in\" and \"out\" are allowed!"
748	locat=connect; exit
749	fi
750	IFS="$IFSALT"
751	fi
752	done < $config_file
753
754	else
755
756
757	# INTERPRETATION DER KONFIGURATIONSDATEI MITTELS FORTRAN 90 - PROGRAMM
758	[[ $silent = false ]] && printf "..."
759	export cond1 cond2 config_file do_remote do_trace input_list localhost output_list
760	export interpreted_config_file=.icf.$RANDOM
761
762	# case $localhost_realname in
763	# (caurus\|twister) interpret_config.hp;;
764	# (bora\|breva\|elephanta\|gallego\|gregale\|hababai\|maestro\|orkan\|ostria) export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/muksoft/packages/intel_ifc/8.1/lib/; interpret_config_9.x;;
765	# (levanto\|vorias) export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/muksoft/packages/intel/ifort/9.1.037/lib/; interpret_config_9.x_levanto;;
766	# (quanero) export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/opt/intel_fc_80/lib; interpret_config_9.x;;
767	# (*) interpret_config.x;;
768	# esac
769
770	if [[ $localhost_realname = "gate" ]]
771	then
772	interpret_config_gate.x
773	else
774	interpret_config.x
775	fi
776
777	# AUSFUEHRUNG DER GENERIERTEN SHELL-KOMMANDOS IN DIESER SHELL
778	chmod u+x $interpreted_config_file
779	export PATH=$PATH:.
780	. $interpreted_config_file
781	rm $interpreted_config_file
782
783	fi
784
785
786	# QUELLTEXTVERZEICHNIS AUF LOKALER MASCHINE AUS KONFIGURATIONSDATEI
787	# BESTIMMEN (WUERDE SONST EVTL. DAS VERZEICHNIS DES JEWEILS UNTER -h
788	# ANGEGEBENEN REMOTE-RECHNERS SEIN)
789	# BEI BATCH-JOBS SIND DIE ZU UEBERSETZENDEN PROGRAMMTEILE SCHON KOMPLETT
790	if [[ "$SOURCES_COMPLETE" = "" ]]
791	then
792
793	# ZUERST PRUEFEN, OB EIN GLOBALER QUELLTEXTPFAD FUER ALLE RECHNER
794	# VEREINBART WURDE
795	source_path=""
796	line=""
797	grep "%source_path" $config_file > tmp_mrun
798	while read line
799	do
800	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
801	then
802	if [[ "$(echo $line \| cut -d" " -f3)" = "" ]]
803	then
804	global_source_path=`echo $line \| cut -d" " -f2`
805	fi
806	fi
807	done < tmp_mrun
808
809	line=""
810	found=false
811	grep " $localhost" $config_file \| grep "%source_path" > tmp_mrun
812	while read line
813	do
814	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
815	then
816	if [[ $found = true ]]
817	then
818	printf "\n\n +++ more than one source path found in configuration file"
819	printf "\n for local host \"$localhost\" "
820	locat=source_path; exit
821	fi
822	source_path=`echo $line \| cut -d" " -f2`
823	found=true
824	fi
825	done < tmp_mrun
826	rm tmp_mrun
827
828	if [[ "$source_path" = "" ]]
829	then
830	if [[ "$global_source_path" != "" ]]
831	then
832	source_path=$global_source_path
833	else
834	printf "\n\n +++ no source path found in configuration file"
835	printf "\n for local host \"$localhost\" "
836	locat=source_path; exit
837	fi
838	fi
839	eval source_path=$source_path
840
841	if [[ ! -d $source_path ]]
842	then
843	printf "\n\n +++ source path \"$source_path\" on local host"
844	printf "\n \"$localhost\" does not exist"
845	locat=source_path; exit
846	fi
847
848	fi
849
850
851
852	# NOCHMAL PRUEFEN, OB AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL
853	# (HOST KANN IN KONFIGURATIONSDATEI ANDERS FESTGELEGT WORDEN SEIN)
854	# WERT VON do_remote WIRD FUER DATEIVERBINDUNGEN BENOETIGT.
855	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
856	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
857	if [[ -n $host && "$host" != $localhost ]]
858	then
859	do_batch=true
860	do_remote=true
861	case $host in
862	(ibm\|ibmb\|ibmh\|ibms\|ibmy\|lctit\|nech\|neck\|unics) true;;
863	(*) printf "\n"
864	printf "\n +++ execution host \"$host\" not admitted for MRUN,"
865	printf "\n or no queueing system available on execution host!"
866	locat=nqs; (( iec = 0 )); exit;;
867	esac
868	else
869	host=$localhost
870	fi
871
872
873	# PRUEFUNG EINIGER PROZESSORZAHLANGABEN BEI RECHNUNGEN AUF PARALLELRECHNERN
874	if [[ "$cond1" = parallel \|\| "$cond2" = parallel ]]
875	then
876
877	# PRUEFEN, OB DIE ANZAHL DER ZU VERWENDENDEN PES ANGEGEBEN WURDE
878	if [[ ! -n $numprocs ]]
879	then
880	printf "\n"
881	printf "\n +++ option \"-K parallel\" requires additional specification"
882	printf "\n of the number of processors to be used by"
883	printf "\n mrun-option \"-X\" or by environment-variable"
884	printf "\n \"numprocs\" in the configuration file"
885	locat=numprocs; (( iec = 0 )); exit
886	fi
887
888	# PRUEFEN, OB DIE PROZESSORANZAHL PRO KNOTEN ANGEGEBEN WURDE (GGF.
889	# DEFAULT-WERT SETZEN) UND OB SIE EIN GANZZAHLIGER TEILER DER
890	# GESAMTPROZESSORANZAHL IST
891	if [[ $host = nech \|\| $host = neck \|\| $host = ibmh \|\| $host = ibmb \|\| $host = ibms ]]
892	then
893	[[ "$tasks_per_node" = "" ]] && tasks_per_node=6
894	(( ival = $tasks_per_node ))
895	(( pes = numprocs ))
896	# if [[ $(echo $package_list \| grep -c dvrp_graphics+1PE) = 1 ]]
897	# then
898	# (( pes = pes - 1 ))
899	# fi
900	(( ii = pes / ival ))
901	if (( pes - ii * ival > 0 ))
902	then
903	printf "\n"
904	printf "\n +++ tasks per node (option \"-T\") must be an integral"
905	printf "\n divisor of the total number of processors (option \"-X\")"
906	printf "\n values of this mrun-call: \"-T $tasks_per_node\" \"-X $numprocs\""
907	locat=tasks_per_node; (( iec = 0 )); exit
908	fi
909	fi
910
911	# IBMY HAT NUR EINEN KNOTEN
912	if [[ $host = ibmy ]]
913	then
914	if [[ "$tasks_per_node" != "" && "$tasks_per_node" != "$numprocs" ]]
915	then
916	printf "\n"
917	printf "\n +++ on ibmy, tasks per node (option \"-T\") must be equal to the"
918	printf "\n total number of processors (option \"-X\")"
919	printf "\n values of this mrun-call: \"-T $tasks_per_node\" \"-X $numprocs\""
920	locat=tasks_per_node; (( iec = 0 )); exit
921	fi
922	fi
923
924	# FALLS OPENMP PARALLELISIERUNG VERWENDET WERDEN SOLL, ANZAHL VON THREADS
925	# SETZEN UND ZAHL DER TASKS PRO KNOTEN AUF 1 SETZEN
926	if [[ $use_openmp = true ]]
927	then
928	threads_per_task=$tasks_per_node
929	tasks_per_node=1
930	fi
931	OOPT="-O $threads_per_task"
932	TOPT="-T $tasks_per_node"
933
934	# GESAMTZAHL DER KNOTEN BESTIMMEN
935	if [[ "$tasks_per_node" != "" ]]
936	then
937	(( nodes = numprocs / ( tasks_per_node * threads_per_task ) ))
938	fi
939
940	# PRUEFEN, OB NODE USAGE EINEN ERLAUBTEN WERT HAT BZW. DEN DEFAULT
941	# SETZEN
942	if [[ $node_usage = default ]]
943	then
944	if [[ $host = ibms ]]
945	then
946	node_usage=shared
947	else
948	node_usage=not_shared
949	fi
950	fi
951	if [[ $node_usage != shared && $node_usage != not_shared ]]
952	then
953	printf "\n"
954	printf "\n +++ node usage (option \"-n\") is only allowed to be set"
955	printf "\n \"shared\" or \"not_shared\""
956	locat=tasks_per_node; (( iec = 0 )); exit
957	fi
958
959	fi
960
961	# PRUEFEN, OB HOSTFILE EXISTIERT
962	if [[ -n $hostfile ]]
963	then
964	if [[ ! -f $hostfile ]]
965	then
966	printf "\n"
967	printf "\n +++ hostfile \"$hostfile\" does not exist"
968	locat=hostfile; exit
969	fi
970	fi
971
972	# PRUEFEN, OB RHOSTS DATEI EXISTIERT. GEGEBENENFALLS ANLEGEN BZW. ERWEITERN
973	if [[ $host = ibmy && $do_remote = false ]]
974	then
975	if [[ ! -f $HOME/.rhosts ]]
976	then
977	echo "gfdl5.yonsei.ac.kr" > $HOME/.rhosts
978	printf "\n\n *** file:"
979	printf "\n $HOME/.rhosts"
980	printf "\n was created\n"
981	fi
982	if [[ $(grep -c gfdl5.yonsei.ac.kr $HOME/.rhosts) = 0 ]]
983	then
984	echo "gfdl5.yonsei.ac.kr" >> $HOME/.rhosts
985	printf "\n\n *** file:"
986	printf "\n $HOME/.rhosts"
987	printf "\n was extended by the name of the current host\n"
988	fi
989	fi
990
991	# DEFAULT-DATEITRANSFER-PROTOKOLL FESTLEGEN
992	if [[ "$filetransfer_protocol" = "" ]]
993	then
994	case $host in
995	(nech\|neck\|ibm\|ibmb\|ibmh\|ibms\|ibmy\|lctit) filetransfer_protocol=scp;;
996	(*) filetransfer_protocol=ftp;;
997	esac
998	fi
999
1000	# PRUEFEN, OB ZULAESSIGES DATEITRANSFER-PROTOKOLL GEWAEHLT WURDE
1001	if [[ "$filetransfer_protocol" != ftp && "$filetransfer_protocol" != scp ]]
1002	then
1003	printf "\n"
1004	printf "\n +++ illegal value \"$filetransfer_protocol\" for Option -f"
1005	printf "\n only \"ftp\" or \"scp\" are allowed"
1006	locat=options; exit
1007	fi
1008
1009
1010	# FALLS NICHT VORGEGEBEN, DEFAULT-QUEUE AUF DER ZIELMASCHINE FESTLEGEN
1011	if [[ $queue = none ]]
1012	then
1013	case $host in
1014	(ibmb) if [[ $node_usage = shared ]]
1015	then
1016	queue=cshare
1017	else
1018	queue=csolo
1019	fi;;
1020	(ibmh) if [[ $node_usage = shared ]]
1021	then
1022	queue=cshare
1023	else
1024	queue=csolo
1025	fi;;
1026	(ibmy) queue=parallel;;
1027	(lctit) queue=default;;
1028	(nech) queue=none;;
1029	(neck) queue=P;;
1030	(unics) queue=unics;;
1031	esac
1032	fi
1033
1034
1035	# EVTL. NETCDF-UNTERSTUETZUNG SETZEN
1036	case $host in
1037	(decalpha) netcdf_support=true
1038	netcdf_path=/usr/local/netcdf-3.5.1;;
1039	(ibmb\|ibmh) netcdf_support=true
1040	netcdf_path=/aws/dataformats/netcdf-3.6.0-p1/64-32;;
1041	(ibms) netcdf_support=true
1042	netcdf_path=/applic/lib/NETCDF64;;
1043	(ibmy) netcdf_support=true
1044	netcdf_path=/usr1/users/raasch/pub/netcdf-3.6.0-p1;;
1045	(lcmuk) netcdf_support=true
1046	if [[ $scirocco = true ]]
1047	then
1048	netcdf_path=/opt/netcdf/3.6.2-beta4
1049	elif [[ $fimm = true ]]
1050	then
1051	netcdf_path=/local/netcdf
1052	else
1053	netcdf_path=/muksoft/packages/netcdf/linux
1054	fi;;
1055	(lctit) netcdf_support=true
1056	netcdf_path=/home2/usr5/mkanda/netcdf-3.6.1;;
1057	(nech) netcdf_support=true
1058	netcdf_path=/pool/SX-6/netcdf/netcdf-3.6.0-p1;;
1059	(neck) netcdf_support=true
1060	netcdf_path=/home/DSRC/NC/tatuyama/pub/netcdf-3.6.0-p1;;
1061	esac
1062
1063
1064	# VOLLSTAENDIGE DATEINAMEN DER INPUT-FILES BILDEN,
1065	# INPUT-DATEIEN AUF VORHANDENSEIN PRUEFEN UND EVTL. HOECHSTE ZYKLUSNUMMER
1066	# ERMITTELN
1067	(( i = 0 ))
1068	while (( i < iin ))
1069	do
1070	(( i = i + 1 ))
1071	(( maxcycle = 0 ))
1072
1073	# NAMENSBILDUNG (EVTL. IST FESTER DATEINAME VORGEGEBEN)
1074	if [[ "${actionin[$i]}" = di ]]
1075	then
1076	remotepathin[$i]=${pathin[$i]}/${endin[$i]} # REMOTE-PFAD ERST AUF
1077	# REM-MASCHINE AUSWERTEN
1078	eval filename=${pathin[$i]}/${endin[$i]}
1079	else
1080	remotepathin[$i]=${pathin[$i]}/${afname}${endin[$i]} # REMOTE-PFAD ERST AUF
1081	# REM-MASCHINE AUSWERTEN
1082	eval filename=${pathin[$i]}/${afname}${endin[$i]}
1083	fi
1084
1085	# PRUEFEN AUF VORHANDENSEIN
1086	if [[ $(ls $filename* 2>&1 \| grep -c "not found") = 1 \|\| \
1087	$(ls $filename* 2>&1 \| grep -c "No such file") = 1 \|\| \
1088	$(ls $filename* 2>&1 \| grep -c "does not exist") = 1 ]]
1089	then
1090	# DATEIEN MIT EXTENSION (Z.B. NC) MUESSEN NICHT ZWINGEND VORHANDEN
1091	# SEIN, DESHALB IN SOLCHEN FAELLEN KEIN ABBRUCH. DIES IST NUR EINE
1092	# VORUEBERGEHENDE LOESUNG (OKT 05). NICHT ZWINGEND BENOETIGTE
1093	# EINGABEDATEIEN SOLLTEN EINE SPEZIELLE OPTION IN DER DATEI-
1094	# VERBINDUNGSANWEISUNG BEKOMMEN (Z.B. inopt?)
1095	if [[ "${transin[$i]}" != "locopt" ]]
1096	then
1097	printf "\n\n +++ INPUT-file: "
1098	if [[ "${extin[$i]}" = "" ]]
1099	then
1100	printf "\n $filename"
1101	else
1102	printf "\n $filename.${extin[$i]}"
1103	fi
1104	printf "\n does not exist\n"
1105	locat=input; exit
1106	else
1107	transin[$i]="unavailable"
1108	fi
1109	else
1110
1111	# ZYKLUSNUMMER FESTSTELLEN
1112	ls -1 -d $filename > filelist 2>/dev/null
1113	ls -1 -d $filename.* >> filelist 2>/dev/null
1114	while read zeile
1115	do
1116	cycle=$(print $zeile \| cut -f2 -d".")
1117	if [[ "$cycle" = "$zeile" ]]
1118	then
1119	(( icycle = 0 ))
1120	elif [[ "$cycle" = "${extin[$i]}" ]]
1121	then
1122	(( icycle = 0 ))
1123	else
1124	(( icycle = $cycle ))
1125	fi
1126	if (( icycle > maxcycle ))
1127	then
1128	(( maxcycle = icycle ))
1129	file_to_be_used=$zeile
1130	fi
1131	done <filelist
1132	rm filelist
1133
1134	# EVTL. ZYKLUSNUMMER AN DATEINAMEN ANFUEGEN
1135	if (( maxcycle > 0 ))
1136	then
1137	if [[ "${extin[$i]}" != " " && "${extin[$i]}" != "" ]]
1138	then
1139	filename=${filename}.$maxcycle.${extin[$i]}
1140	else
1141	filename=${filename}.$maxcycle
1142	fi
1143	else
1144	if [[ "${extin[$i]}" != " " && "${extin[$i]}" != "" ]]
1145	then
1146	filename=${filename}.${extin[$i]}
1147	fi
1148	fi
1149
1150	# DATEINAMEN OHNE PFAD ABER MIT ZYKLUSNUMMER ABSPEICHERN,
1151	# DA SPAETER BEI RUECKSPEICHERN VOM ARCHIVSYSTEM EVTL. BENOETIGT
1152	absnamein[$i]=$filename
1153	if (( maxcycle > 0 ))
1154	then
1155	if [[ "${actionin[$i]}" = di ]]
1156	then
1157	frelin[$i]=${endin[$i]}.$maxcycle
1158	else
1159	frelin[$i]=${afname}${endin[$i]}.$maxcycle
1160	fi
1161	else
1162	if [[ "${actionin[$i]}" = di ]]
1163	then
1164	frelin[$i]=${endin[$i]}
1165	else
1166	frelin[$i]=${afname}${endin[$i]}
1167	fi
1168	fi
1169
1170	fi
1171	done
1172
1173
1174	# VOLLSTAENDIGE DATEINAMEN (OHNE $ ODER ~) DER OUTPUT-FILES BILDEN,
1175	# OUTPUT-DATEIEN AUF VORHANDENSEIN PRUEFEN UND EVTL. HOECHSTE ZYKLUSNUMMER
1176	# ERMITTELN ODER, FALLS NICHT VORHANDEN, PRUEFEN, OB SIE SICH ANLEGEN LASSEN
1177	# DIESE AKTIONEN FINDEN NICHT STATT, WENN PROGRAMM AUF REMOTE-MASCHINE
1178	# RECHNET UND DATEI ANSCHLIESSEND TRANSFERIERT WERDEN SOLL!
1179	(( i = 0 ))
1180	while (( i < iout ))
1181	do
1182	(( i = i + 1 ))
1183	if [[ ! ( $fromhost != $localhost && ( "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = tra \|\| "${actionout[$i]}" = trpe ) ) ]]
1184	then
1185	if [[ "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = trpe ]]
1186	then
1187	actionout[$i]=""
1188	elif [[ "${actionout[$i]}" = tra ]]
1189	then
1190	actionout[$i]=a
1191	fi
1192	(( maxcycle = 0 ))
1193	eval filename=${pathout[$i]}/${fname}${endout[$i]}
1194	eval catalogname=${pathout[$i]}
1195	if [[ $(ls $filename* 2>&1 \| grep -c "not found") = 1 \|\| \
1196	$(ls $filename* 2>&1 \| grep -c "No such file") = 1 \|\| \
1197	$(ls $filename* 2>&1 \| grep -c "does not exist") = 1 ]]
1198	then
1199
1200	# OUTPUT-DATEI NICHT VORHANDEN. PRUEFEN, OB ANLEGEN MOEGLICH.
1201	if cat /dev/null > $filename
1202	then
1203	rm $filename
1204	else
1205
1206	# PRUEFEN, OB KATALOG VORHANDEN UND EVTL. DIESEN ANLEGEN
1207	if [[ ! -d $catalogname ]]
1208	then
1209	if mkdir -p $catalogname
1210	then
1211	printf "\n\n *** directory:"
1212	printf "\n $catalogname"
1213	printf "\n was created\n"
1214	else
1215	printf "\n\n +++ OUTPUT-file:"
1216	printf "\n $filename"
1217	printf "\n cannot be created, because directory does not exist"
1218	printf "\n and cannot be created either"
1219	printf "\n"
1220	locat=output ; exit
1221	fi 2>/dev/null
1222	else
1223	printf "\n\n +++ OUTPUT-file:"
1224	printf "\n $filename"
1225	printf "\n cannot be created, although directory exists"
1226	printf "\n"
1227	locat=output ; exit
1228	fi
1229	fi 2>/dev/null
1230	else
1231
1232	# ZYKLUSNUMMER FESTSTELLEN
1233	ls -1 -d $filename > filelist 2>/dev/null
1234	ls -1 -d $filename.* >> filelist 2>/dev/null
1235	while read zeile
1236	do
1237	cycle=$(print $zeile \| cut -f2 -d".")
1238	if [[ "$cycle" = "$zeile" \|\| "$cycle" = ${extout[$i]} ]]
1239	then
1240	(( icycle = 1 ))
1241	else
1242	(( icycle = $cycle + 1 ))
1243	fi
1244	if (( icycle > maxcycle ))
1245	then
1246	(( maxcycle = icycle ))
1247	fi
1248	done <filelist
1249	rm filelist
1250	fi
1251
1252	# EVTL. ZYKLUSNUMMER AN DATEINAMEN ANFUEGEN UND PRUEFEN, OB SICH
1253	# DATEI AUCH WIRKLICH ANLEGEN LAESST. IM APPEND-FALL MUSS AN DEN
1254	# HOECHSTEN VORHANDENEN ZYKLUS-ANGEHAENGT WERDEN. ANLAGEPRUEFUNG
1255	# IST DANN NATUERLICH NICHT ZULAESSIG BZW. MOEGLICH
1256	if [[ "${actionout[$i]}" != a ]]
1257	then
1258	if (( maxcycle > 0 ))
1259	then
1260	filename=${filename}.$maxcycle
1261	if cat /dev/null > $filename
1262	then
1263	rm $filename
1264	else
1265	printf "\n +++ OUTPUT-file:"
1266	printf "\n $filename"
1267	printf "\n cannot be created"
1268	locat=output ; exit
1269	fi
1270	fi
1271	else
1272	(( maxcycle = maxcycle - 1 ))
1273	if (( maxcycle > 0 ))
1274	then
1275	filename=${filename}.$maxcycle
1276	fi
1277	fi
1278
1279	# DATEINAMEN OHNE PFAD ABER MIT ZYKLUSNUMMER ABSPEICHERN,
1280	# DA SPAETER BEI ABLAGE AUF ARCHIVSYSTEM BZW. FUER
1281	# DATEI OUTPUT_FILE_CONNECTIONS EVTL. BENOETIGT
1282	pathout[$i]=$filename
1283	if (( maxcycle > 0 ))
1284	then
1285	frelout[$i]=${fname}${endout[$i]}.$maxcycle
1286	else
1287	frelout[$i]=${fname}${endout[$i]}
1288	fi
1289
1290	fi
1291	done
1292
1293
1294	# PRUEFEN, OB ENTWEDER HAUPTPROGRAMM ODER NUR EIN AUSFUEHRBARES
1295	# PROGRAMM VEREINBART WURDE (IN DIESEM FALL BRAUCHT IM WEITEREN NICHT
1296	# UEBERSETZT ZU WERDEN)
1297	if [[ "$mainprog" = "" && "$executable" = "" ]]
1298	then
1299	printf "\n +++ neither main program nor executable defined"
1300	locat=source; exit
1301	elif [[ "$mainprog" != "" && "$executable" != "" ]]
1302	then
1303	printf "\n +++ main program as well as executable defined"
1304	locat=source; exit
1305	elif [[ "$mainprog" = "" && "$executable" != "" ]]
1306	then
1307	do_compile=false
1308	fi
1309
1310
1311	# ALLE ZU UEBERSETZENDEN PROGRAMMTEILE ZUSAMMENSAMMELN
1312	# BEI BATCH-JOBS IST DIES NICHT NOETIG, WEIL DIE PROGRAMMTEILE BEREITS DURCH
1313	# DEN MRUN-AUFRUF ERMITTELT SIND, DER DEN BATCH-JOB GENERIERT HAT, UND
1314	# IM VERZEICHNIS SOURCES_FOR_RUN_... ABGELEGT SIND
1315	if [[ $do_compile = true && "$SOURCES_COMPLETE" = "" ]]
1316	then
1317
1318	[[ "$source_list" = LM ]] && source_list=LOCALLY_MODIFIED
1319	[[ "$source_list" = WP ]] && source_list=WRITE_PERMIT
1320
1321	if [[ $restart_run != true ]]
1322	then
1323	rm -rf SOURCES_FOR_RUN_$fname
1324	mkdir SOURCES_FOR_RUN_$fname
1325	fi
1326
1327
1328	# EVTL. ZU UEBERSETZENDE PROGRAMMTEILE DADURCH BESTIMMEN, DASS GEPRUEFT
1329	# WIRD, WELCHE DATEIEN WRITE-PERMIT BESITZEN (DATEIEN SOLLTEN DESHALB
1330	# UNTER RCS-KONTROLLE STEHEN). MIT DER VARIABLEN EXCLUDE KOENNEN
1331	# BESTIMMTE DATEIEN GRUNDSAETZLICH VON DER UEBERSETZUNG AUSGESCHLOSSEN
1332	# WERDEN. DIES IST NUR BEI MANUELLEM START VON MRUN DURCH DEN BENUTZER
1333	# MOEGLICH, DA BEI AUTOMATISCHEN RESTARTS TEST DURCH DIE TATSAECHLICH
1334	# ZU UBERSETZENDEN DATEIEN ERSETZT IST.
1335	# ALLE ERMITTELTEN DATEIEN WERDEN IM VERZEICHNIS SOURCES_FOR_RUN_...
1336	# GESAMMELT
1337	if [[ "$source_list" = WRITE_PERMIT ]]
1338	then
1339
1340	source_list=""
1341	cd $source_path
1342
1343
1344	# ALLE MOEGLICHEN QUELLCODEDATEIEN AUFLISTEN
1345	Names=$(ls -1 *.f90 2>&1)
1346	[[ $(echo $Names \| grep -c '*.f90') = 0 ]] && Filenames="$Names"
1347	Names=$(ls -1 *.F90 2>&1)
1348	[[ $(echo $Names \| grep -c '*.F90') = 0 ]] && Filenames="$Filenames $Names"
1349	Names=$(ls -1 *.F 2>&1)
1350	[[ $(echo $Names \| grep -c '*.F') = 0 ]] && Filenames="$Filenames $Names"
1351	Names=$(ls -1 *.f 2>&1)
1352	[[ $(echo $Names \| grep -c '*.f') = 0 ]] && Filenames="$Filenames $Names"
1353	Names=$(ls -1 *.c 2>&1)
1354	[[ $(echo $Names \| grep -c '*.c') = 0 ]] && Filenames="$Filenames $Names"
1355
1356
1357	# DATEIEN MIT WRITE-PERMIT NACH SOURCES_FOR_RUN_... KOPIEREN
1358	for dateiname in $Filenames
1359	do
1360	if [[ -w $dateiname ]]
1361	then
1362	if [[ "$exclude" = "" \|\| $(echo $exclude \| grep -c $dateiname) = 0 ]]
1363	then
1364	cp $dateiname $working_directory/SOURCES_FOR_RUN_$fname
1365	source_list=$source_list"$dateiname "
1366	fi
1367	fi
1368	done
1369
1370	cd - > /dev/null
1371
1372
1373	elif [[ "$source_list" = LOCALLY_MODIFIED ]]
1374	then
1375
1376	# MODIFIZIERTE DATEIEN DER SVN-ARBEITSKOPIE BESTIMMEN
1377	source_list=""
1378	cd $source_path
1379
1380
1381	# PRUEFEN, OB VERZEICHNIS UEBERHAUPT UNTER SVN-KONTROLLE STEHT
1382	if [[ ! -d .svn ]]
1383	then
1384	printf "\n\n +++ source directory"
1385	printf "\n \"$source_path\" "
1386	printf "\n is not under control of \"subversion\"."
1387	printf "\n Please do not use mrun-option \"-s LOCALLY MODIFIED\"\n"
1388	fi
1389
1390
1391	# ALLE MODIFIZIERTEN QUELLCODEDATEIEN AUFLISTEN
1392	Filenames=""
1393	svn status \| while read line
1394	do
1395	firstc=`echo $line \| cut -c1`
1396	if [[ $firstc = M \|\| $firstc = "?" ]]
1397	then
1398	Name=`echo "$line" \| cut -c8-`
1399	extension=`echo $Name \| cut -d. -f2`
1400	if [[ "$extension" = f90 \|\| "$extension" = F90 \|\| "$extension" = f \|\| "$extension" = F \|\| "$extension" = c ]]
1401	then
1402	Filenames="$Filenames "$Name
1403	fi
1404	fi
1405	done
1406
1407
1408	# DATEIEN NACH SOURCES_FOR_RUN_... KOPIEREN
1409	for dateiname in $Filenames
1410	do
1411	cp $dateiname $working_directory/SOURCES_FOR_RUN_$fname
1412	source_list=$source_list"$dateiname "
1413	done
1414
1415	cd - > /dev/null
1416
1417
1418	# MITTELS OPTION -s ANGEGEBENE DATEIEN NACH SOURCES_FOR_RUN_... KOPIEREN
1419	# BEI AUTOMATISCHEN FORTSETZUNGSLAEUFEN SIND DORT SCHON ALLE DATEIEN
1420	# VORHANDEN
1421	elif [[ "$source_list" != "" && $restart_run != true ]]
1422	then
1423
1424	cd $source_path
1425
1426	for filename in $source_list
1427	do
1428
1429	# QUELLTEXT-DATEI DARF KEINE PFADE BEINHALTEN
1430	if [[ $(print $filename \| grep -c "/") != 0 ]]
1431	then
1432	printf "\n +++ source code file: $filename"
1433	printf "\n must not contain (\"/\") "
1434	locat=source; exit
1435	fi
1436
1437	if [[ ! -f $filename ]]
1438	then
1439	printf "\n +++ source code file: $filename"
1440	printf "\n does not exist"
1441	locat=source; exit
1442	else
1443	cp $filename $working_directory/SOURCES_FOR_RUN_$fname
1444	fi
1445
1446	done
1447
1448	cd - > /dev/null
1449
1450	fi
1451
1452
1453	# PRUEFEN, OB ENTWEDER HAUPTPROGRAMM VORHANDEN UND ES EVTL. IN DER
1454	# LISTE DER ZU UEBERSETZENDEN PROGRAMMTEILE MIT ENTHALTEN IST (WENN
1455	# NICHT, WIRD ES DIESER LISTE HINZUGEFUEGT)
1456	if [[ $restart_run != true ]]
1457	then
1458
1459	if [[ ! -f "$source_path/$mainprog" ]]
1460	then
1461	printf "\n\n +++ main program: $mainprog"
1462	printf "\n does not exist in source directory"
1463	printf "\n \"$source_path\"\n"
1464	locat=source; exit
1465	else
1466	if [[ $(echo $source_list \| grep -c $mainprog) = 0 ]]
1467	then
1468	cp $source_path/$mainprog SOURCES_FOR_RUN_$fname
1469	source_list=${mainprog}" $source_list"
1470	fi
1471	fi
1472	fi
1473
1474
1475	# DATEIEN AUS ZUSAETZLICHEM QUELLVERZEICHNIS HINZUFUEGEN
1476	if [[ $restart_run != true && "$add_source_path" != "" ]]
1477	then
1478
1479	# GIBT ES DAS VERZEICHNIS UEBERHAUPT?
1480	if [[ ! -d $add_source_path ]]
1481	then
1482	printf "\n\n +++ WARNING: additional source code directory"
1483	printf "\n \"$add_source_path\" "
1484	printf "\n does not exist or is not a directory."
1485	printf "\n No source code will be used from this directory!\n"
1486	add_source_path=""
1487	sleep 3
1488	else
1489
1490	cd $add_source_path
1491
1492	Names=$(ls -1 *.f90 2>&1)
1493	[[ $(echo $Names \| grep -c '*.f90') = 0 ]] && AddFilenames="$Names"
1494	Names=$(ls -1 *.F90 2>&1)
1495	[[ $(echo $Names \| grep -c '*.F90') = 0 ]] && AddFilenames="$AddFilenames $Names"
1496	Names=$(ls -1 *.F 2>&1)
1497	[[ $(echo $Names \| grep -c '*.F') = 0 ]] && AddFilenames="$AddFilenames $Names"
1498	Names=$(ls -1 *.f 2>&1)
1499	[[ $(echo $Names \| grep -c '*.f') = 0 ]] && AddFilenames="$AddFilenames $Names"
1500	Names=$(ls -1 *.c 2>&1)
1501	[[ $(echo $Names \| grep -c '*.c') = 0 ]] && AddFilenames="$AddFilenames $Names"
1502
1503	cd - > /dev/null
1504	cd SOURCES_FOR_RUN_$fname
1505
1506	for dateiname in $AddFilenames
1507	do
1508	if [[ -f $dateiname ]]
1509	then
1510	printf "\n +++ source code file \"$dateiname\" found in additional"
1511	printf "\n source code directory \"$add_source_path\" "
1512	printf "\n as well as in directory \"$source_path\"."
1513	locat=source; exit
1514	fi
1515
1516	cp $add_source_path/$dateiname .
1517	source_list="$source_list $dateiname"
1518
1519	# Default User-Interface von der Liste entfernen, falls Datei
1520	# ein User-Interface enthaelt
1521	if [[ $( cat $dateiname \| grep -c "END SUBROUTINE user_parin" ) != 0 ]]
1522	then
1523	if [[ $dateiname != user_interface.f90 && -f user_interface.f90 ]]
1524	then
1525	rm -rf user_interface.f90
1526	source_list=`echo $source_list \| sed -e 's/user_interface.f90//'`
1527	printf "\n\n *** default \"user_interface.f90\" removed from the files to be translated"
1528	printf "\n since a user-interface is found in file"
1529	printf "\n \"$add_source_path/$dateiname\" \n"
1530	sleep 3
1531	else
1532	printf "\n\n *** user-interface file \"$dateiname\" "
1533	printf "\n added to the files to be translated \n"
1534	sleep 3
1535	fi
1536	fi
1537	done
1538
1539	cd - > /dev/null
1540	fi
1541	fi
1542
1543
1544	# ALLE UNTERPROGRAMME, DIE ZU VEREINBARTEN SOFTWAREPAKETEN GEHOEREN,
1545	# DER LISTE DER ZU UEBERSETZENDEN DATEIEN HINZUFUEGEN
1546	if [[ $restart_run != true && -n $package_list ]]
1547	then
1548
1549	cd $source_path
1550
1551	for package in $package_list
1552	do
1553
1554	[[ $package = "dvrp_graphics+1PE" ]] && package=dvrp_graphics
1555
1556	# ERMITTELE ALLE DATEIEN, DIE ZUM PAKET GEHOEREN
1557	# FEHLERMELDUNGEN WERDEN ABGEFANGEN, DA * AUCH VERZEICHNISSNAMEN
1558	# LIEFERT
1559	package_source_list=`grep "defined( __$package " * 2>/dev/null \| cut -f1 -d:`
1560
1561
1562	# FUEGE DIESE DATEIEN DER LISTE DER ZU UEBERSETZENDEN DATEIEN
1563	# HINZU, FALLS SIE NOCH NICHT DAZUGEHOEREN
1564	for source_list_name in $package_source_list
1565	do
1566	if [[ $(echo $source_list \| grep -c $source_list_name) = 0 ]]
1567	then
1568
1569	# NUR DATEIEN MIT GUELTIGEN ENDUNGEN VERWENDEN
1570	ending=`echo $source_list_name \| cut -f2 -d.`
1571	if [[ "$ending" = f90 \|\| "$ending" = F90 \|\| "$ending" = f \|\| "$ending" = F \|\| "$ending" = c ]]
1572	then
1573	cp $source_list_name $working_directory/SOURCES_FOR_RUN_$fname
1574	source_list="$source_list $source_list_name"
1575	fi
1576	fi
1577	done
1578	done
1579
1580	cd - > /dev/null
1581	fi
1582
1583
1584	# MAKEFILE AUF VORHANDENSEIN PRUEFEN UND KOPIEREN
1585	# BEI RESTART-LAEUFEN LIEGT ES SCHON IM VERZEICHNIS SOURCES_FOR_RUN...
1586	if [[ "$use_makefile" = true && "$restart_run" != true ]]
1587	then
1588	[[ "$makefile" = "" ]] && makefile=$source_path/Makefile
1589	if [[ ! -f $makefile ]]
1590	then
1591	printf "\n +++ file \"$makefile\" does not exist"
1592	printf "\n provide this file or set \"use_makefile=false\" in configuration file\n"
1593	locat=make; exit
1594	else
1595	cp $makefile SOURCES_FOR_RUN_$fname/Makefile
1596	fi
1597	fi
1598
1599	fi # do_compile=true
1600
1601
1602	# FALLS PROGRAMMTEILE UEBERSETZT WERDEN SOLLEN, FOLGEN JETZT EINIGE
1603	# UEBERPRUEFUNGEN UND DAS SETZEN DER PRAEPROZESSOR-DIREKTIVEN
1604	if [[ $do_compile = true ]]
1605	then
1606
1607	# PRAEPROZESSOR-DIREKTIVEN ZUM SELEKTIVEN AUSWAEHLEN VON CODETEILEN
1608	# ZUSAMMENSETZEN
1609	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1610	then
1611	PPOPTS=-Dibm=ibm
1612	elif [[ $(echo $localhost \| cut -c1-3) = nec ]]
1613	then
1614	PPOPTS=-Dnec
1615	else
1616	PPOPTS=-D$localhost
1617	fi
1618	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1619	then
1620	[[ -n $cond1 ]] && PPOPTS="$PPOPTS -D$cond1=$cond1"
1621	[[ -n $cond2 ]] && PPOPTS="$PPOPTS -D$cond2=$cond2"
1622	if [[ $netcdf_support = true ]]
1623	then
1624	PPOPTS="$PPOPTS -Dnetcdf=netcdf"
1625	[[ $localhost != ibms ]] && PPOPTS="$PPOPTS -Dnetcdf_64bit=netcdf_64bit"
1626	fi
1627	if [[ $localhost = ibmy ]]
1628	then
1629	PPOPTS="$PPOPTS -Dibmy_special=ibmy_special"
1630	fi
1631	else
1632	[[ -n $cond1 ]] && PPOPTS="$PPOPTS -D$cond1"
1633	[[ -n $cond2 ]] && PPOPTS="$PPOPTS -D$cond2"
1634	if [[ $netcdf_support = true ]]
1635	then
1636	PPOPTS="$PPOPTS -Dnetcdf"
1637	[[ $localhost != decalpha && $localhost != lctit ]] && PPOPTS="$PPOPTS -Dnetcdf_64bit"
1638	fi
1639	fi
1640	if [[ -n $package_list ]]
1641	then
1642	for package in $package_list
1643	do
1644	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1645	then
1646	if [[ $package != "dvrp_graphics+1PE" ]]
1647	then
1648	PPOPTS="$PPOPTS -D$package=$package"
1649	else
1650	PPOPTS="$PPOPTS -Ddvrp_graphics"
1651	export use_seperate_pe_for_dvrp_output=true
1652	fi
1653	else
1654	if [[ $package != "dvrp_graphics+1PE" ]]
1655	then
1656	PPOPTS="$PPOPTS -D$package"
1657	else
1658	PPOPTS="$PPOPTS -Ddvrp_graphics"
1659	export use_seperate_pe_for_dvrp_output=true
1660	fi
1661	fi
1662	done
1663	fi
1664	if [[ -n $cpp_opts ]]
1665	then
1666	for popts in $cpp_opts
1667	do
1668	PPOPTS="$PPOPTS -D$popts"
1669	done
1670	fi
1671
1672	# -D ARGUMENTEN EINEN DOPPELTEN UNTERSTRICH VORANSTELLEN
1673	PPOPTS=`echo " $PPOPTS" \| sed 's/ -D/ -D__/g'`
1674
1675	# OPTION ZUM EINSCHALTEN DES PRAEPROZESSORS HINZUFUEGEN
1676	if [[ $host = decalpha ]]
1677	then
1678	C_PPOPTS="-cpp -DMPI_REAL=MPI_DOUBLE_PRECISION -DMPI_2REAL=MPI_2DOUBLE_PRECISION $PPOPTS"
1679	elif [[ $(echo $host \| cut -c1-3) = ibm ]]
1680	then
1681	# blanks in PPOPTS muessen durch "," ersetzt werden
1682	PPOPTS=`echo $PPOPTS \| sed 's/ -/,-/g'`
1683	C_PPOPTS="-qsuffix=cpp=f90 -WF,-DMPI_REAL=MPI_DOUBLE_PRECISION,$PPOPTS"
1684	elif [[ $host = lcmuk ]]
1685	then
1686	C_PPOPTS="$PPOPTS -DMPI_REAL=MPI_DOUBLE_PRECISION -DMPI_2REAL=MPI_2DOUBLE_PRECISION"
1687	elif [[ $host = lctit ]]
1688	then
1689	C_PPOPTS="$PPOPTS -Mpreprocess -DMPI_REAL=MPI_DOUBLE_PRECISION -DMPI_2REAL=MPI_2DOUBLE_PRECISION"
1690	elif [[ $(echo $host \| cut -c1-3) = nec ]]
1691	then
1692	C_PPOPTS="-Ep -DMPI_REAL=MPI_REAL8 -DMPI_2REAL=MPI_2REAL8 -DSCFFT=dzfft -DCSFFT=zdfft $PPOPTS"
1693	else
1694	C_PPOPTS="$PPOPTS"
1695	fi
1696
1697	else
1698
1699
1700	# BEI LOKALEN RECHNUNGEN PRUEFEN, OB EXECUTABLE VORHANDEN
1701	if [[ $do_remote = false ]]
1702	then
1703	if [[ ! -f $executable ]]
1704	then
1705	printf "\n +++ executable file: $executable"
1706	printf "\n does not exist"
1707	locat=executable; exit
1708	fi
1709	fi
1710	fi
1711
1712
1713	# JOBMODUS FESTSTELLEN
1714	if [[ "$ENVIRONMENT" = BATCH && $localhost != lctit \|\| "$QUEUE" != interactive && $localhost = lctit ]]
1715	then
1716	jobmo=BATCH
1717	else
1718	jobmo=INTERACTIVE
1719	fi
1720
1721
1722	# HOSTSPEZIFISCHE DEFAULT-COMPILER SETZEN, FALLS NICHT BEREITS
1723	# DURCH BENUTZER ANDERWEITIG VEREINBART
1724	if [[ "$compiler_name" = "" ]]
1725	then
1726	case $localhost in
1727	(unics) compiler_name=f77;;
1728	(lcmuk) if [[ "$cond1" = parallel \|\| "$cond2" = parallel ]]
1729	then
1730	compiler_name=mpif90
1731	else
1732	compiler_name=ifc
1733	fi;;
1734	(lctit) if [[ "$cond1" = parallel \|\| "$cond2" = parallel ]]
1735	then
1736	compiler_name=mpif90
1737	echo ">>> compiler=mpif90"
1738	else
1739	compiler_name=pgf95
1740	echo ">>> compiler=pgf95"
1741	fi;;
1742	(nech) compiler_name=sxmpif90;;
1743	(decalpha) compiler_name=f95;;
1744	(ibm\|ibmb\|ibmh\|ibms\|ibmy) compiler_name=mpxlf95_r;;
1745	(*) printf "\n +++ unknown host name: $localhost \n";
1746	locat=localhost; exit;;
1747	esac
1748	fi
1749
1750
1751	# COMPILER AUF NECK UEBERSCHREIBEN
1752	[[ $localhost = neck ]] && compiler_name=mpif90
1753
1754
1755
1756	# PRAEPROZESSOR-PFAD BESTIMMEN
1757	case $localhost in
1758	(decalpha\|ibm\|ibmb\|ibmh\|ibms\|ibmy\|unics) praeproc=cpp;;
1759	esac
1760
1761
1762	# TEMPORAEREN KATALOGNAMEN BESTIMMEN
1763	kennung=$RANDOM
1764	if [[ "$tmp_user_catalog" = "" ]]
1765	then
1766	if [[ $localhost = ibmb \|\| $localhost = ibmh ]]
1767	then
1768	tmp_user_catalog=$TMPDIR
1769	elif [[ $localhost = nech ]]
1770	then
1771	tmp_user_catalog=$WRKSHR
1772	else
1773	tmp_user_catalog=/tmp
1774	fi
1775	fi
1776	TEMPDIR=$tmp_user_catalog/${usern}.$kennung
1777
1778
1779	# KATALOGNAMEN FUER ZWISCHENSPEICHERUNG VON FORTSETZUNGSLAUFDATEIEN
1780	# BESTIMMEN
1781	if [[ "$tmp_data_catalog" = "" ]]
1782	then
1783	if [[ $localhost = ibmb \|\| $localhost = ibmh ]]
1784	then
1785	tmp_data_catalog=$WORK/mrun_restart_data
1786	elif [[ $localhost = nech ]]
1787	then
1788	tmp_data_catalog=$WRKSHR/mrun_restart_data
1789	else
1790	tmp_data_catalog=/tmp/mrun_restart_data
1791	fi
1792	fi
1793
1794
1795	# EVENTUELL BEI LOKALEN RECHNUNGEN $-ZEICHEN IN ENVIRONMENT-VARIABLEN
1796	# ERSETZEN
1797	if [[ $do_remote = false && $do_compile = true ]]
1798	then
1799	eval fopts=\"$fopts\"
1800	eval lopts=\"$lopts\"
1801	fi
1802
1803
1804
1805	# COMPILE- UND LINK-OPTIONEN BESTIMMEN
1806	FOPTS="$fopts"
1807	LOPTS="$lopts"
1808	ROPTS="$ropts"
1809	if [[ ( $(echo $host \| cut -c1-3) = nec \|\| $(echo $host \| cut -c1-3) = ibm \|\| $host = lctit ) && -n $numprocs ]]
1810	then
1811	XOPT="-X $numprocs"
1812	fi
1813
1814
1815	# BEI VERWENDUNG VON DVRP-SOFTWARE MUSS ENTSPECHENDE GRAFIK-BIBLIOTHEK
1816	# MIT EINGEBUNDEN WERDEN
1817	if [[ -n $package_list ]]
1818	then
1819	if [[ $(echo $package_list \| grep -c dvrp_graphics) != 0 ]]
1820	then
1821
1822	# DVRP-GRAFIK GIBT ES NUR AUF DER IBM AM HLRN, AUF NECH/NECK UND
1823	# DEM NOTEBOOK SCIROCCO
1824	if [[ $host != ibmh && $host != nech && $host != neck && $host != lcmuk && "$local_compile" != true ]]
1825	then
1826	printf "\n"
1827	printf "\n +++ option -p with package \"dvrp_graphics\" only allowed on nech and ibmh"
1828	locat=parameter; exit
1829	fi
1830	if [[ $host = ibmh ]]
1831	then
1832	if [[ $cond1 = debug \|\| $cond2 = debug ]]
1833	then
1834	FOPTS="-I/home/h/hzazchmi/lib/debug $FOPTS"
1835	LOPTS="$LOPTS -L/home/h/hzazchmi/lib/debug -lDVRP2 -lftp"
1836	else
1837	FOPTS="-I/home/h/nikevita/lib_stable/optimize $FOPTS"
1838	LOPTS="$LOPTS -L/home/h/nikevita/lib_stable/optimize -lDVRP2 -lftp"
1839	fi
1840	elif [[ $host = nech ]]
1841	then
1842	FOPTS="-I/import/ds9b/ipf2/b/b323014/lib/optimize $FOPTS"
1843	LOPTS="$LOPTS -L/import/ds9b/ipf2/b/b323014/lib/optimize -lDVRP2 -lftp"
1844	elif [[ $host = neck ]]
1845	then
1846	FOPTS="-I/home/DSRC/NC/tatuyama/pub/dvrp $FOPTS"
1847	LOPTS="$LOPTS -L/home/DSRC/NC/tatuyama/pub/dvrp -lDVRP2 -lftp"
1848	elif [[ $host = lcmuk ]]
1849	then
1850	FOPTS="-I/usr/local/lib/dvrp/optimize $FOPTS"
1851	LOPTS="$LOPTS -L/usr/local/lib/dvrp/optimize -lDVRP2 -lftp"
1852	fi
1853	fi
1854	fi
1855
1856
1857	# EVTL. EINBINDEN DER NETCDF-BIBLIOTHEK
1858	if [[ $netcdf_support = true ]]
1859	then
1860	case $host in
1861	(decalpha) FOPTS="-I${netcdf_path}/include $FOPTS"
1862	LOPTS="$LOPTS -L${netcdf_path}/lib -lnetcdf";;
1863	(ibmb\|ibmh) FOPTS="-I ${netcdf_path}/include-64 $FOPTS"
1864	LOPTS="$LOPTS -L${netcdf_path}/lib -lnetcdf";;
1865	(ibms) FOPTS="-I /applic/netcdf64/src/f90 $FOPTS"
1866	LOPTS="$LOPTS -L${netcdf_path} -lnetcdf";;
1867	(ibmy) FOPTS="-I ${netcdf_path}/include $FOPTS"
1868	LOPTS="$LOPTS -L${netcdf_path}/lib -lnetcdf";;
1869	(lcmuk\|nech\|neck) FOPTS="-I ${netcdf_path}/include $FOPTS"
1870	LOPTS="$LOPTS -L${netcdf_path}/lib -lnetcdf";;
1871	(lctit) FOPTS="-I ${netcdf_path}/src/f90 $FOPTS"
1872	LOPTS="$LOPTS -L${netcdf_path}/src/libsrc -lnetcdf";;
1873
1874	esac
1875	fi
1876
1877	# PRUEFEN DER CPU-ZEIT. (CPUMAX WIRD ALS ENV-VARIABLE VOM HAUTPRO-
1878	# GRAMM BENOETIGT
1879	done=false
1880	while [[ $done = false ]]
1881	do
1882	cputime=$cpumax
1883	if (( $cputime == 0 ))
1884	then
1885	printf "\n +++ cpu-time is undefined"
1886	printf "\n >>> Please type CPU-time in seconds as INTEGER:"
1887	printf "\n >>> "
1888	read cputime 1>/dev/null 2>&1
1889	else
1890	done=true
1891	fi
1892	cpumax=$cputime
1893	done
1894
1895	(( minuten = cputime / 60 ))
1896	(( sekunden = cputime - minuten * 60 ))
1897
1898
1899	# PRUEFEN DER KERNSPEICHERANFORDERUNG
1900	if [[ $do_batch = true ]]
1901	then
1902	done=false
1903	while [[ $done = false ]]
1904	do
1905	if (( memory == 0 ))
1906	then
1907	printf "\n +++ memory demand is undefined"
1908	printf "\n >>> Please type memory in MByte per process as INTEGER:"
1909	printf "\n >>> "
1910	read memory 1>/dev/null 2>&1
1911	else
1912	done=true
1913	fi
1914	done
1915	fi
1916
1917
1918	# PRUEFEN, OB FUER REMOTE-RECHNUNGEN EIN BENUTZERNAME ANGEGEBEN WURDE
1919	if [[ $do_remote = true && -z $remote_username ]]
1920	then
1921	while [[ -z $remote_username ]]
1922	do
1923	printf "\n +++ username on remote host \"$host\" is undefined"
1924	printf "\n >>> Please type username:"
1925	printf "\n >>> "
1926	read remote_username
1927	done
1928	mc="$mc -u$remote_username"
1929	fi
1930
1931	###########################################################################
1932	# HEADER-AUSGABE
1933	###########################################################################
1934
1935
1936	calltime=$(date)
1937	printf "\n"
1938	# [[ $silent = false ]] && clear
1939	printf "#--------------------------------------------------------------# \n"
1940	printf "\| $version$calltime \| \n"
1941	printf "\| \| \n"
1942	spalte1="called on:"; spalte2=$localhost_realname
1943	printf "\| $spalte1$spalte2 \| \n"
1944	if [[ $local_compile = false ]]
1945	then
1946	if [[ $do_remote = true ]]
1947	then
1948	spalte1="execution on:"; spalte2="$host (username: $remote_username)"
1949	else
1950	spalte1="execution on:"; spalte2="$host ($localhost_realname)"
1951	fi
1952	else
1953	spalte1="compiling test only!"; spalte2=""
1954	fi
1955	printf "\| $spalte1$spalte2 \| \n"
1956	if [[ -n $numprocs ]]
1957	then
1958	spalte1="number of PEs:"; spalte2=$numprocs
1959	printf "\| $spalte1$spalte2 \| \n"
1960	fi
1961	if [[ -n $tasks_per_node ]]
1962	then
1963	spalte1="tasks per node:"; spalte2="$tasks_per_node (number of nodes: $nodes)"
1964	printf "\| $spalte1$spalte2 \| \n"
1965	fi
1966	if [[ $threads_per_task != 1 ]]
1967	then
1968	spalte1="threads per task:"; spalte2="$threads_per_task"
1969	printf "\| $spalte1$spalte2 \| \n"
1970	fi
1971	printf "\| \| \n"
1972	if [[ $do_compile = true ]]
1973	then
1974	spalte1=cpp-directives:; spalte2=$C_PPOPTS
1975	printf "\| $spalte1$spalte2 \| \n"
1976	zeile=$(echo "$C_PPOPTS" \| cut -c41-)
1977	while [[ "$zeile" != "" ]]
1978	do
1979	spalte1=""
1980	spalte2=$zeile
1981	printf "\| $spalte1$spalte2 \| \n"
1982	zeile=$(echo "$zeile" \| cut -c41-)
1983	done
1984
1985	spalte1=compiler-options:; spalte2="$FOPTS $MODULE_OPTIONS"
1986	printf "\| $spalte1$spalte2 \| \n"
1987	zeile=$(echo "$FOPTS $MODULE_OPTIONS" \| cut -c41-)
1988	while [[ "$zeile" != "" ]]
1989	do
1990	spalte1=""
1991	spalte2=$zeile
1992	printf "\| $spalte1$spalte2 \| \n"
1993	zeile=$(echo "$zeile" \| cut -c41-)
1994	done
1995
1996	spalte1=linker-options:; spalte2=$LOPTS
1997	printf "\| $spalte1$spalte2 \| \n"
1998	zeile=$(echo "$LOPTS" \| cut -c41-)
1999	while [[ "$zeile" != "" ]]
2000	do
2001	spalte1=""
2002	spalte2=$zeile
2003	printf "\| $spalte1$spalte2 \| \n"
2004	zeile=$(echo "$zeile" \| cut -c41-)
2005	done
2006
2007	spalte1="main program":; spalte2=$mainprog
2008	printf "\| $spalte1$spalte2 \| \n"
2009	if [[ "$use_makefile" = true ]]
2010	then
2011	spalte1="using \"make\" for com"; spalte2="piling and linking"
2012	printf "\| $spalte1$spalte2 \| \n"
2013	fi
2014	# if [[ $vtk_graphics = true ]]
2015	# then
2016	# spalte1=""; spalte2="wird in C++ - Programm eingebunden (vtk)"
2017	# printf "\| $spalte1$spalte2 \| \n"
2018	# fi
2019	else
2020	spalte1=executable:; spalte2=$executable
2021	printf "\| $spalte1$spalte2 \| \n"
2022	fi
2023	printf "\| \| \n"
2024	spalte1="base name of files":; spalte2=$fname
2025	printf "\| $spalte1$spalte2 \| \n"
2026	if [[ $fname != $afname ]]
2027	then
2028	spalte1="base name of input files":; spalte2=$afname
2029	printf "\| $spalte1$spalte2 \| \n"
2030	fi
2031	spalte1="INPUT control list":; spalte2=$input_list
2032	printf "\| $spalte1$spalte2 \| \n"
2033	spalte1="OUTPUT control list":; spalte2=$output_list
2034	printf "\| $spalte1$spalte2 \| \n"
2035
2036	if [[ $do_batch = true \|\| "$LOADLBATCH" = yes ]]
2037	then
2038	spalte1="memory demand / PE":; spalte2="$memory MB"
2039	printf "\| $spalte1$spalte2 \| \n"
2040	spalte1=CPU-time:; spalte2="$minuten:$sekunden"
2041	printf "\| $spalte1$spalte2 \| \n"
2042	fi
2043
2044	if [[ $do_compile = true ]]
2045	then
2046	printf "\| \| \n"
2047	printf "\| Files to be compiled: \| \n"
2048	zeile=$source_list
2049	while [[ "$zeile" != "" ]]
2050	do
2051	spalte3=$zeile
2052	printf "\| $spalte3 \| \n"
2053	zeile=$(echo "$zeile" \| cut -c61-)
2054	done
2055	fi
2056	printf "#--------------------------------------------------------------#"
2057
2058
2059
2060	# BEDINGTE AUSGABE DER DATEIVERBINDUNGEN
2061	if [[ $do_trace = true ]]
2062	then
2063	(( i = 0 ))
2064	while (( i < iin ))
2065	do
2066	(( i = i + 1 ))
2067	if (( i == 1 ))
2068	then
2069	printf "\n\n >>> INPUT-file assignments:\n"
2070	fi
2071	printf "\n ${localin[$i]} : ${absnamein[$i]}"
2072	done
2073	(( i = 0 ))
2074	while (( i < iout ))
2075	do
2076	(( i = i + 1 ))
2077	if (( i == 1 ))
2078	then
2079	printf "\n\n >>> OUTPUT-file assignments:\n"
2080	fi
2081	printf "\n ${localout[$i]} : ${pathout[$i]}"
2082	done
2083	(( i = 0 ))
2084	while (( i < iic ))
2085	do
2086	(( i = i + 1 ))
2087	if (( i == 1 ))
2088	then
2089	printf "\n\n >>> INPUT-commands:\n"
2090	fi
2091	printf "\n ${in_command[$i]}"
2092	done
2093	(( i = 0 ))
2094	while (( i < ioc ))
2095	do
2096	(( i = i + 1 ))
2097	if (( i == 1 ))
2098	then
2099	printf "\n\n >>> OUTPUT-commands:\n"
2100	fi
2101	printf "\n ${out_command[$i]}"
2102	done
2103	fi
2104
2105
2106	# ABFRAGEN BEI AUFRUF AUF LOKALER MASCHINE
2107	if [[ $remotecall = false && $silent = false && $jobmo != BATCH ]]
2108	then
2109	antwort=dummy
2110	printf "\n\n"
2111	while [[ "$antwort" != y && "$antwort" != Y && "$antwort" != n && "$antwort" != N ]]
2112	do
2113	printf " >>> everything o.k. (y/n) ? "
2114	read antwort
2115	done
2116	if [[ $antwort = n \|\| $antwort = N ]]
2117	then
2118	locat=user_abort; (( iec = 0 )); exit
2119	fi
2120	if [[ $do_batch = true ]]
2121	then
2122	printf " >>> batch-job will be created and submitted"
2123	else
2124	if [[ $local_compile = false ]]
2125	then
2126	printf " >>> MRUN will now continue to execute on this machine"
2127	else
2128	printf " >>> a test compilation will now be carried out on this machine"
2129	fi
2130	fi
2131	fi
2132
2133
2134
2135
2136	# FALLS AUF DIESER MASCHINE GERECHNET WERDEN SOLL, WERDEN JETZT ENTSPRE-
2137	# CHENDE AKTIONEN DURCHGEFUEHRT
2138	if [[ $do_batch = false ]]
2139	then
2140
2141
2142	# TEMPORAEREN KATALOG ERZEUGEN
2143	mkdir -p $TEMPDIR
2144	chmod go+rx $TEMPDIR
2145	tmpcreate=true
2146
2147
2148	# SAEMTLICHE QUELLTEXT-DATEIEN BZW. AUSFUEHRBARES PROGRAMM IN
2149	# TEMPORAERES VERZEICHNIS KOPIEREN
2150	if [[ $do_compile = true ]]
2151	then
2152
2153	# ON NEC, COMPILATION IS DONE ON HOST CROSS VIA CROSS COMPILING
2154	# CREATE A TEMPORARY DIRECTORY ON THAT MACHINE (HOME MOUNTED VIA NFS)
2155	if [[ $localhost = nech ]]
2156	then
2157	TEMPDIR_COMPILE=$HOME/work/${usern}.$kennung
2158	if mkdir -p $TEMPDIR_COMPILE
2159	then
2160	printf "\n *** \"$TEMPDIR_COMPILE\" "
2161	printf "\n is generated as temporary directory for cross compiling\n"
2162	else
2163	printf "\n +++ creating directory \"$TEMPDIR_COMPILE\" "
2164	printf "\n needed for cross compilation failed"
2165	locat=compile
2166	exit
2167	fi
2168	else
2169	TEMPDIR_COMPILE=$TEMPDIR
2170	fi
2171
2172	if [[ "$use_makefile" = true ]]
2173	then
2174
2175	# PFADNAMEN FUER DAS MAKE-DEPOSITORY ERMITTELN
2176	line=""
2177	grep "%depository_path" $config_file \| while read line
2178	do
2179	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
2180	then
2181	if [[ "$(echo $line \| cut -d" " -s -f3)" = "" ]]
2182	then
2183	global_depository_path=`echo $line \| cut -d" " -s -f2`
2184	fi
2185	fi
2186	done
2187
2188	line=""
2189	grep " $localhost" $config_file \| grep "%depository_path" \| while read line
2190	do
2191	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
2192	then
2193	local_depository_path=`echo $line \| cut -d" " -s -f2`
2194	fi
2195	done
2196
2197	if [[ "$local_depository_path" = "" ]]
2198	then
2199	if [[ "$global_depository_path" != "" ]]
2200	then
2201	local_depository_path=$global_depository_path
2202	else
2203	printf "\n\n +++ no depository path found in configuration file"
2204	printf "\n for local host \"$localhost\" "
2205	printf "\n please set \"\%depository_path\" in configuration file\n"
2206	locat=config_file; exit
2207	fi
2208	fi
2209	eval local_depository_path=$local_depository_path
2210
2211	basename=`print $mainprog \| cut -f1 -d"."`
2212	eval make_depository=${local_depository_path}/${basename}_current_version.tar
2213	if [[ ! -f $make_depository ]]
2214	then
2215	printf "\n"
2216	printf "\n *** WARNING: make depository \"$make_depository\" not found"
2217	printf "\n \"make\" will fail, if the Makefile or other source files are missing\n"
2218	else
2219	cp $make_depository $TEMPDIR_COMPILE
2220	cd $TEMPDIR_COMPILE
2221	tar -xf $make_depository > /dev/null 2>&1
2222	cd - > /dev/null
2223	fi
2224
2225	cp SOURCES_FOR_RUN_$fname/* $TEMPDIR_COMPILE
2226
2227	# FALLS USER-INTERFACE VORHANDEN UND AUF DATEI MIT ANDEREM NAMEN
2228	# ALS user_interface.f90 LIEGT, DIESEN GEAENDERTEN NAMEN INS
2229	# MAKEFILE EINTRAGEN
2230	cd $TEMPDIR_COMPILE
2231	interface_file=`grep -l "END SUBROUTINE user_parin" $source_list`
2232	if [[ "$interface_file" != "" ]]
2233	then
2234	interface_file=`echo $interface_file \| cut -d"." -f1`
2235	mv Makefile Makefile_old
2236	sed "s/user_interface/$interface_file/g" Makefile_old > Makefile
2237	fi
2238	cd - > /dev/null
2239	fi
2240	else
2241	cp $executable ${TEMPDIR}/a.out
2242	fi
2243
2244
2245	# WECHSEL IN TEMPORAEREN KATALOG
2246	cd $TEMPDIR
2247	printf "\n *** changed to temporary directory: $TEMPDIR"
2248
2249
2250	# OUTPUT-DATEI-VERBINDUNGEN AUF TEMPORAERER DATEI ABLEGEN
2251	# DIESE DATEI KANN VON SPAETER AUFZURUFENDEN BENUTZERPROZEDUREN GELESEN
2252	# WERDEN, UM ZU LOKALEN DATEINAMEN GEHOERENDE PERMANENTE NAMEN ZU
2253	# ERMITTELN
2254	(( i = 0 ))
2255	while (( i < iout ))
2256	do
2257	(( i = i + 1 ))
2258	if [[ "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = tra \|\| "${actionout[$i]}" = trpe ]]
2259	then
2260	printf "${localout[$i]} ${actionout[$i]}\n${pathout[$i]}\n${localhost}_${fname}${endout[$i]}\n" >> OUTPUT_FILE_CONNECTIONS
2261	else
2262	printf "${localout[$i]} ${actionout[$i]}\n${pathout[$i]}\n${frelout[$i]}\n" >> OUTPUT_FILE_CONNECTIONS
2263	fi
2264	done
2265
2266
2267	# EVTL. UEBERSETZUNGSAKTIONEN STARTEN
2268	if [[ $do_compile = true ]]
2269	then
2270
2271
2272	# COMPILING WITH MAKE (ON NEC COMPILER IS CALLED ON HOST CROSS)
2273	if [[ "$use_makefile" = true ]]
2274	then
2275	printf "\n\n\n *** compilation starts \n$striche\n"
2276	printf " *** compilation with make using following options:\n"
2277	printf " compilername: $compiler_name\n"
2278	printf " options: $FOPTS\n"
2279	printf " preprocessor-directives: $C_PPOPTS \n"
2280	printf " linker-options: $LOPTS \n"
2281	printf " source code files: $source_list \n"
2282
2283	if [[ $localhost = nech ]]
2284	then
2285	ssh 136.172.44.192 -l $usern ". /SX/opt/etc/initsx.sh; cd \$HOME/work/${usern}.$kennung; sxmake -f Makefile PROG=a.out F90=$compiler_name COPT=\"$C_PPOPTS\" F90FLAGS=\"$FOPTS\" LDFLAGS=\"$LOPTS\" "
2286	cp $TEMPDIR_COMPILE/a.out .
2287	[[ $? != 0 ]] && compile_error=true
2288	rm -rf $TEMPDIR_COMPILE
2289	else
2290	make -f Makefile PROG=a.out F90=$compiler_name COPT="$C_PPOPTS" F90FLAGS="$FOPTS" LDFLAGS="$LOPTS"
2291	fi
2292
2293	# UEBERSETZUNG "VON HAND" (OHNE MAKE)
2294	else
2295
2296
2297	# UEBERSETZUNG DER QUELLTEXT-DATEIEN UND DES HAUPTPROGRAMMS
2298	# $CPPOPTS FUER CPP-PRAEPROZESSOR WURDEN OBEN BESTIMMT
2299	printf "\n\n\n *** compilation starts \n$striche\n"
2300
2301
2302	# VORWEG EVTL. UEBERSETZUNG VON PROGRAMMTEILEN MIT SPEZIELLEN
2303	# COMPILERN UND/ODER COMPILEROPTIONEN. DIESE WERDEN BEI DER SPAETEREN
2304	# EIGENTLICHEN UEBERSETZUNG ALS OBJECT-FILES EINGEBUNDEN
2305	new_source_list=""
2306	for filename in $source_list
2307	do
2308
2309	basename=`print $filename \| cut -f1 -d"."`
2310
2311	# EVTL. SPEZIELLEN COMPILER FUER UP BESTIMMEN
2312	comp_var=$(eval echo \$comp_$basename) # \$ liefert evtl. fuer source alternativ vereinbarten Compiler
2313	comp_opt_var=$(eval echo \$$basename) # \$$ liefert evtl. fuer source vereinbarte Compiler-Environment-Variable
2314
2315	if [[ "$comp_var" = "" && "$comp_opt_var" = "" ]]
2316	then
2317	new_source_list="$new_source_list "$filename
2318	else
2319
2320	if [[ "$comp_var" = "" ]]
2321	then
2322	SPECIAL_COMPILER=$compiler_name
2323	else
2324	SPECIAL_COMPILER=$comp_var
2325	fi
2326
2327	if [[ "$comp_opt_var" = "" ]]
2328	then
2329	SPECIAL_FOPTS=$FOPTS
2330	else
2331	SPECIAL_FOPTS="$parallel_options $(eval echo \$$comp_opt_var)"
2332	fi
2333
2334	printf " *** compiling of $filename with special compiler call: $SPECIAL_COMPILER $CPPOPTS -c $SPECIAL_FOPTS \n"
2335	$SPECIAL_COMPILER $C_PPOPTS -c $SPECIAL_FOPTS $MODULE_OPTIONS $filename
2336	if [[ $? != 0 ]]
2337	then
2338	printf "\n +++ compiling error occured"
2339	locat=compile
2340	exit
2341	fi
2342	new_source_list="$new_source_list "${basename}.o
2343	fi
2344	done
2345	source_list="$new_source_list"
2346
2347
2348	# EIGENTLICHE UEBERSETZUNG MIT DEN NORMALEN OPTIONEN
2349	printf " *** compilation with standard options: $compiler_name $FOPTS $MODULE_OPTIONS \n"
2350	printf " preprocessor-directives: $C_PPOPTS \n"
2351	printf " linker-options: $LOPTS \n"
2352	printf " source code files: $source_list \n"
2353
2354	$compiler_name $C_PPOPTS $FOPTS $MODULE_OPTIONS $LOPTS $source_list
2355
2356	fi
2357	if [[ $? != 0 \|\| "$compile_error" = true \|\| "$module_compile_error" = true ]]
2358	then
2359	printf "\n +++ error occured while compiling or linking"
2360	locat=compile
2361	exit
2362	else
2363	printf "$striche\n *** compilation finished \n"
2364	fi
2365	fi
2366
2367
2368	# FALLS NUR TESTWEISE KOMPILIERT WERDEN SOLLTE, IST MRUN JETZT FERTIG
2369	if [[ $local_compile = true ]]
2370	then
2371	cd $HOME
2372	rm -rf $TEMPDIR
2373	locat=local_compile; exit
2374	fi
2375
2376
2377	# BEREITSTELLEN DER INPUT-DATEIEN
2378	# SCHLEIFE UEBER ALLE VOM BENUTZER ANGEGEBENEN DATEIEN
2379	(( i = 0 ))
2380	while (( i < iin ))
2381	do
2382	(( i = i + 1 ))
2383	if (( i == 1 ))
2384	then
2385	printf "\n\n *** providing INPUT-files:\n$striche"
2386	fi
2387
2388
2389	# OPTIONALE DATEIEN BEI NICHTVORHANDENSEIN UEBERGEHEN
2390	if [[ "${transin[$i]}" = unavailable ]]
2391	then
2392	if [[ "${extin[$i]}" = "" \|\| "${extin[$i]}" = " " ]]
2393	then
2394	printf "\n +++ WARNING: input file \"${pathin[$i]}/${afname}${endin[$i]}\" "
2395	printf "\n is not available!"
2396	else
2397	printf "\n +++ WARNING: input file \"${pathin[$i]}/${afname}${endin[$i]}.${extin[$i]}\" "
2398	printf "\n is not available!"
2399	fi
2400	continue
2401	fi
2402
2403	# PRUEFEN, OB EINZELDATEI ODER DATEI PRO PROZESSOR
2404	files_for_pes=false; datentyp=file
2405	if [[ "${actionin[$i]}" = pe && -n $numprocs ]]
2406	then
2407	files_for_pes=true; datentyp=directory
2408	actionin[$i]=""
2409	elif [[ "${actionin[$i]}" = pe && ! -n $numprocs ]]
2410	then
2411	actionin[$i]=""
2412	elif [[ "${actionin[$i]}" = arpe && -n $numprocs ]]
2413	then
2414	files_for_pes=true; datentyp=directory
2415	actionin[$i]="ar"
2416	elif [[ "${actionin[$i]}" = arpe && ! -n $numprocs ]]
2417	then
2418	actionin[$i]="ar"
2419	elif [[ "${actionin[$i]}" = flpe && -n $numprocs ]]
2420	then
2421	files_for_pes=true; datentyp=directory
2422	actionin[$i]="fl"
2423	elif [[ "${actionin[$i]}" = flpe && ! -n $numprocs ]]
2424	then
2425	actionin[$i]="fl"
2426	fi
2427
2428	if [[ $files_for_pes = true ]]
2429	then
2430	printf "\n >>> INPUT: ${absnamein[$i]}/.... to ${localin[$i]}"
2431	else
2432	printf "\n >>> INPUT: ${absnamein[$i]} to ${localin[$i]}"
2433	fi
2434
2435	# INPUT-DATEI FUER EINEN FORTSETZUNGSLAUF. ES WIRD GEPRUEFT,
2436	# OB DIESE DATEI NOCH AUF DEM TEMPORAEREN DATENKATALOG VORHANDEN
2437	# IST. FALLS NICHT, WIRD VERSUCHT, SIE ANSCHLIESSEND VOM ARCHIV-
2438	# SERVER ZU HOLEN
2439	if [[ "${actionin[$i]}" = fl ]]
2440	then
2441	printf "\n $datentyp will be fetched from temporary directory \"${tmp_data_catalog}\" !"
2442	if [[ $files_for_pes = false ]]
2443	then
2444	if [[ -f "$tmp_data_catalog/${frelin[$i]}" ]]
2445	then
2446	ln $tmp_data_catalog/${frelin[$i]} ${localin[$i]}
2447	got_tmp[$i]=true
2448	elif [[ -f "$WORK/${frelin[$i]}" && $ignore_archive_error = true ]]
2449	then
2450	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" !"
2451	printf "\n *** trying to use backup copy in \"$WORK\" "
2452	cp $WORK/${frelin[$i]} ${localin[$i]}
2453	else
2454	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" "
2455	printf "\n or \"$tmp_data_catalog\" does not exist!"
2456	printf "\n *** trying to get copy from archive"
2457	actionin[$i]=ar
2458	fi
2459	else
2460	if [[ -d "$tmp_data_catalog/${frelin[$i]}" ]]
2461	then
2462	mkdir ${localin[$i]}
2463	ln $tmp_data_catalog/${frelin[$i]}/* ${localin[$i]}
2464	got_tmp[$i]=true
2465	elif [[ -d "$WORK/${frelin[$i]}" && $ignore_archive_error = true ]]
2466	then
2467	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" !"
2468	printf "\n *** trying to use backup copy in \"$WORK\" "
2469	cp -r $WORK/${frelin[$i]} ${localin[$i]}
2470	else
2471	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" "
2472	printf "\n or \"$tmp_data_catalog\" does not exist!"
2473	printf "\n *** trying to get copy from archive"
2474	actionin[$i]=ar
2475	fi
2476	fi
2477	fi
2478
2479
2480	# DATEI LIEGT AUF ARCHIV-SERVER
2481	if [[ "${actionin[$i]}" = ar ]]
2482	then
2483
2484	if [[ $files_for_pes = false ]]
2485	then
2486	printf "\n file will be restored from archive-system ($archive_system)!"
2487	else
2488	printf "\n directory will be restored from archive-system ($archive_system)!"
2489	fi
2490
2491	file_restored=false
2492
2493	if [[ $archive_system = asterix ]]
2494	then
2495	do_stagein=true
2496	(( stagein_anz = 0 ))
2497	while [[ $do_stagein = true ]]
2498	do
2499	if [[ $files_for_pes = false ]]
2500	then
2501	stagein -O ${frelin[$i]} > STAGEIN_OUTPUT
2502	else
2503	stagein -t -O ${frelin[$i]} > STAGEIN_OUTPUT
2504	fi
2505	cat STAGEIN_OUTPUT
2506	if [[ $(grep -c "st.msg:i24" STAGEIN_OUTPUT) != 0 ]]
2507	then
2508	file_restored=true
2509	do_stagein=false
2510	else
2511	(( stagein_anz = stagein_anz + 1 ))
2512	if (( stagein_anz == 10 ))
2513	then
2514	printf "\n +++ stagein stoped after 10 tries"
2515	locat=stage
2516	exit
2517	fi
2518	printf "\n +++ restoring from archive failed, trying again:"
2519	sleep 900
2520	fi
2521	done
2522	elif [[ $archive_system = DMF ]]
2523	then
2524	if [[ $files_for_pes = false ]]
2525	then
2526	printf "\n +++ restoring of single files impossible with $archive_system !\n"
2527	locat=DMF
2528	exit
2529	else
2530	find $ARCHIVE/${frelin[$i]} -type m -print \| dmget
2531	cp -r $ARCHIVE/${frelin[$i]} $PWD
2532	file_restored=true
2533	fi
2534	elif [[ $archive_system = tivoli ]]
2535	then
2536	if [[ $files_for_pes = false ]]
2537	then
2538	if [[ $localhost = ibmh ]]
2539	then
2540	ssh $usern@hdata.hlrn.de "cp $PERM/${frelin[$i]} $PWD"
2541	else
2542	ssh $usern@bdata.hlrn.de "cp $PERM/${frelin[$i]} $PWD"
2543	fi
2544	else
2545	(( inode = 0 ))
2546	while (( inode < nodes ))
2547	do
2548	if [[ $localhost = ibmh ]]
2549	then
2550	ssh $usern@hdata.hlrn.de "cd $PWD; tar xf $PERM/${frelin[$i]}/${frelin[$i]}.node_$inode.tar"
2551	else
2552	ssh $usern@bdata.hlrn.de "cd $PWD; tar xf $PERM/${frelin[$i]}/${frelin[$i]}.node_$inode.tar"
2553	fi
2554	(( inode = inode + 1 ))
2555	done
2556	fi
2557	file_restored=true
2558	elif [[ $archive_system = ut ]]
2559	then
2560	if [[ $files_for_pes = false ]]
2561	then
2562	cp $UT/${frelin[$i]} .
2563	else
2564	(( inode = 0 ))
2565	while (( inode < nodes ))
2566	do
2567	tar xf $UT/${frelin[$i]}/${frelin[$i]}.node_$inode.tar
2568	(( inode = inode + 1 ))
2569	done
2570	fi
2571	file_restored=true
2572	else
2573	printf "\n +++ archive_system=\"$archive_system\" restore impossible!"
2574	locat=rearchive
2575	exit
2576	fi
2577
2578	if [[ $file_restored = true ]]
2579	then
2580
2581	# DATEI AUCH AUF TEMPORAERES DATENVERZEICHNIS LEGEN, DAMIT
2582	# SIE BEI WEITEREN ZUGRIFFEN NOCH VORHANDEN IST
2583	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog; chmod g+rx $tmp_data_catalog
2584	if [[ $files_for_pes = false ]]
2585	then
2586	ln -f ${frelin[$i]} $tmp_data_catalog/${frelin[$i]}
2587	else
2588	mkdir $tmp_data_catalog/${frelin[$i]}
2589	ln -f ${frelin[$i]}/* $tmp_data_catalog/${frelin[$i]}
2590	fi
2591	got_tmp[$i]=true
2592
2593	# DATEI UNTER LOKALEM NAMEN ZUR VERFUEGUNG STELLEN
2594	mv ${frelin[$i]} ${localin[$i]}
2595
2596	fi
2597	fi
2598
2599
2600	# DATEI LIEGT IM VOM BENUTZER ANGEGEBENEN VERZEICHNIS
2601	if [[ "${actionin[$i]}" = "" \|\| "${actionin[$i]}" = "di" \|\| "${actionin[$i]}" = "npe" ]]
2602	then
2603
2604	if [[ "${actionin[$i]}" = "npe" && -n $numprocs ]]
2605	then
2606
2607	# DATEI WIRD FUER DIE PROZESSOREN EINES PARALLERECHNERS BEREITGESTELLT
2608	printf "\n file will be provided for $numprocs processors"
2609	mkdir ${localin[$i]}
2610	ival=$numprocs
2611	(( ii = 0 ))
2612	while (( ii <= ival-1 ))
2613	do
2614	if (( ii < 10 ))
2615	then
2616	cp ${absnamein[$i]} ${localin[$i]}/_000$ii
2617	elif (( ii < 100 ))
2618	then
2619	cp ${absnamein[$i]} ${localin[$i]}/_00$ii
2620	elif (( ii < 1000 ))
2621	then
2622	cp ${absnamein[$i]} ${localin[$i]}/_0$ii
2623	else
2624	cp ${absnamein[$i]} ${localin[$i]}/_$ii
2625	fi
2626	(( ii = ii + 1 ))
2627	done
2628
2629	else
2630
2631	if [[ $files_for_pes = true ]]
2632	then
2633
2634	# DIE DEN PROZESSOREN EINES PARALLELRECHNERS ZUGEHOERIGEN
2635	# DATEIEN WERDEN BEREITGESTELLT, INDEM ZUERST DER GESAMTE
2636	# KATALOGINHALT KOPIERT UND DANN DIE EINZELNEN DATEIEN
2637	# PER MOVE UMBENANNT WERDEN
2638	printf "\n providing $numprocs files for the respective processors"
2639	mkdir ${localin[$i]}
2640	cp -r ${absnamein[$i]}/* ${localin[$i]}
2641
2642	else
2643	# BEREITSTELLUNG AUF EINPROZESSORRECHNERN
2644	cp ${absnamein[$i]} ${localin[$i]}
2645	fi
2646	fi
2647	fi
2648
2649	done
2650	if (( i != 0 ))
2651	then
2652	printf "\n$striche\n *** all INPUT-files provided \n"
2653	fi
2654
2655
2656	# NAMELIST-DATEI MIT WERTEN VON ENVIRONMENT-VARIABLEN ERZEUGEN (ZU
2657	# LESEN VON PALM)
2658	cat > ENVPAR << %%END%%
2659	&envpar run_identifier = '$fname', host = '$localhost',
2660	write_binary = '$write_binary', tasks_per_node = $tasks_per_node,
2661	maximum_cpu_time_allowed = ${cpumax}. /
2662
2663	%%END%%
2664
2665
2666	# EVENTUELLE INPUT-KOMMANDOS ABARBEITEN
2667	(( i = 0 ))
2668	while (( i < iic ))
2669	do
2670	(( i = i + 1 ))
2671	if (( i == 1 ))
2672	then
2673	printf "\n\n *** execution of INPUT-commands:\n$striche"
2674	fi
2675	printf "\n >>> ${in_command[$i]}"
2676	eval ${in_command[$i]}
2677	if (( i == iic ))
2678	then
2679	printf "\n$striche\n"
2680	fi
2681	done
2682
2683
2684	# VERBLEIBENDE CPU-ZEIT BERECHNEN
2685	cpurest=${cpumax}.
2686
2687
2688	# PROGRAMMSTART
2689	printf "\n\n *** execution starts in directory\n \"`pwd`\"\n$striche\n"
2690	PATH=$PATH:$TEMPDIR
2691
2692	if [[ "$cond1" = debug \|\| "$cond2" = debug ]]
2693	then
2694	if [[ "$ENVIRONMENT" = BATCH ]]
2695	then
2696	printf "\n +++ debug is allowed in interactive mode only"
2697	locat=debug
2698	exit
2699	fi
2700	if [[ $localhost = decalpha ]]
2701	then
2702	dxladebug a.out
2703	elif [[ $localhost = ibmb \|\| $localhost = ibmh ]]
2704	then
2705
2706	# SETUP THE IBM MPI ENVIRONMENT
2707	export MP_SHARED_MEMORY=yes
2708	export AIXTHREADS_SCOPE=S
2709	export OMP_NUM_THREADS=$threads_per_task
2710	export AUTHSTATE=files
2711	export XLFRTEOPTS="nlwidth=132:err_recovery=no" # RECORD-LENGTH OF NAMELIST-OUTPUT
2712
2713	# FOLLOWING OPTIONS ARE MANDATORY FOR TOTALVIEW
2714	export MP_ADAPTER_USE=shared
2715	export MP_CPU_USE=multiple
2716	export MP_TIMEOUT=1200
2717
2718	unset MP_TASK_AFFINITY
2719
2720	# SO FAR, TOTALVIEW NEEDS HOSTFILE MECHANISM FOR EXECUTION
2721	#(( ii = 1 ))
2722	#while (( ii <= $numprocs ))
2723	#do
2724	# echo $localhost_realname >> hostfile
2725	# (( ii = ii + 1 ))
2726	#done
2727	#export MP_HOSTFILE=hostfile
2728
2729	if [[ "$LOADLBATCH" = yes ]]
2730	then
2731	totalview poe a.out $ROPTS
2732	else
2733	echo totalview poe -a a.out -procs $numprocs -rmpool 0 -nodes 1 $ROPTS
2734	export TVDSVRLAUNCHCMD=ssh
2735	totalview poe -a a.out -procs $numprocs -rmpool 0 -nodes 1 $ROPTS
2736	fi
2737	else
2738	printf "\n +++ no debug available on \"$localhost\" "
2739	printf "\n or not implemented in mrun so far"
2740	locat=debug
2741	exit
2742	fi
2743	else
2744	if [[ -n $numprocs ]]
2745	then
2746
2747	# RUNNING THE PROGRAM ON PARALLEL MACHINES
2748	if [[ $(echo $host \| cut -c1-3) = ibm ]]
2749	then
2750	# SETUP THE IBM MPI ENVIRONMENT
2751	export MP_SHARED_MEMORY=yes
2752	export AIXTHREAD_SCOPE=S
2753	export OMP_NUM_THREADS=$threads_per_task
2754	export XLSMPOPTS="spins=0:yields=0:stack=20000000"
2755	export AUTHSTATE=files
2756	export XLFRTEOPTS="nlwidth=132:err_recovery=no" # RECORD-LENGTH OF NAMELIST-OUTPUT
2757	# export MP_PRINTENV=yes
2758
2759	# TUNING-VARIABLEN ZUR VERBESSERUNG DER KOMMUNIKATION
2760	# ZEIGEN ABER DERZEIT (SEP 04, FEDERATION) KAUM WIRKUNG
2761	export MP_WAIT_MODE=poll
2762	[[ $node_usage = not_shared ]] && export MP_SINGLE_THREAD=yes
2763	# export MP_EAGER_LIMIT=65535
2764
2765	# # TESTWEISE FUER TURBOMPI (JAN 05)
2766	# export MPJ_MTAB=128
2767	# export MPJ_ALLTOALL=1
2768	# export MPJ_ALLTOALLV=1
2769
2770	if [[ "$LOADLBATCH" = yes ]]
2771	then
2772	printf "\n--- Control: OMP_NUM_THREADS = \"$OMP_NUM_THREADS\" \n"
2773	if [[ "$cond1" = hpmcount \|\| "$cond2" = hpmcount ]]
2774	then
2775	/opt/optibm/HPM_2_4_1/bin/hpmcount a.out $ROPTS > aout_output 2>&1
2776	else
2777	poe ./a.out $ROPTS > aout_output 2>&1
2778	fi
2779	else
2780	if [[ $localhost = ibmb \|\| $localhost = ibmh \|\| $localhost = ibms ]]
2781	then
2782	poe a.out -procs $numprocs -nodes 1 -rmpool 0 $ROPTS > aout_output 2>&1
2783	elif [[ $localhost = ibmy ]]
2784	then
2785	if [[ -f $hostfile ]]
2786	then
2787	cp $hostfile hostfile
2788	else
2789	(( ii = 1 ))
2790	while (( ii <= $numprocs ))
2791	do
2792	echo $localhost_realname >> hostfile
2793	(( ii = ii + 1 ))
2794	done
2795	fi
2796	export MP_HOSTFILE=hostfile
2797	./a.out -procs $tasks_per_node $ROPTS > aout_output 2>&1
2798	else
2799	if [[ "$host_file" = "" ]]
2800	then
2801	printf "\n +++ no hostfile given in configuration file"
2802	locat=config_file
2803	exit
2804	else
2805	eval host_file=$host_file
2806	fi
2807	export MP_HOSTFILE=$host_file
2808	poe a.out -procs $numprocs -tasks_per_node $numprocs $ROPTS > aout_output 2>&1
2809	fi
2810	fi
2811	elif [[ $host = nech \|\| $host = neck ]]
2812	then
2813	(( ii = nodes ))
2814	if [[ $ii = 1 ]]
2815	then
2816	export F_ERRCNT=0 # acceptable number of errors before program is stopped
2817	export MPIPROGINF=YES
2818	# export F_TRACE=YES\|FMT1\|FMT2 # output of ftrace informations to job protocol
2819	echo "*** execution on single node with mpirun"
2820	mpirun -np $numprocs ./a.out $ROPTS > aout_output 2>&1
2821	else
2822	(( i = 0 ))
2823	while (( i < ii ))
2824	do
2825	echo "-h $i -p $tasks_per_node -e ./mpi_exec_shell" >> multinode_config
2826	(( i = i + 1 ))
2827	done
2828
2829	echo "#!/bin/sh" > mpi_exec_shell
2830	echo " " >> mpi_exec_shell
2831	echo "set -u" >> mpi_exec_shell
2832	echo "F_ERRCNT=0" >> mpi_exec_shell
2833	echo "MPIPROGINV=YES" >> mpi_exec_shell
2834	echo "OMP_NUM_THREADS=$threads_per_task" >> mpi_exec_shell
2835	echo "cpurest=$cpurest" >> mpi_exec_shell
2836	echo "fname=$fname" >> mpi_exec_shell
2837	echo "localhost=$localhost" >> mpi_exec_shell
2838	echo "return_addres=$return_addres" >> mpi_exec_shell
2839	echo "return_username=$return_username" >> mpi_exec_shell
2840	echo "tasks_per_node=$tasks_per_node" >> mpi_exec_shell
2841	echo "write_binary=$write_binary" >> mpi_exec_shell
2842	echo "use_seperate_pe_for_dvrp_output=$use_seperate_pe_for_dvrp_output" >> mpi_exec_shell
2843	echo " " >> mpi_exec_shell
2844	echo "export F_ERRCNT" >> mpi_exec_shell
2845	echo "export MPIPROGINV" >> mpi_exec_shell
2846	echo "export OMP_NUM_THREADS" >> mpi_exec_shell
2847	echo "export cpurest" >> mpi_exec_shell
2848	echo "export fname" >> mpi_exec_shell
2849	echo "export localhost" >> mpi_exec_shell
2850	echo "export return_addres" >> mpi_exec_shell
2851	echo "export return_username" >> mpi_exec_shell
2852	echo "export tasks_per_node" >> mpi_exec_shell
2853	echo "export write_binary" >> mpi_exec_shell
2854	echo "export use_seperate_pe_for_dvrp_output" >> mpi_exec_shell
2855	echo " " >> mpi_exec_shell
2856	echo "exec ./a.out > aout_output 2>&1" >> mpi_exec_shell
2857
2858	chmod u+x mpi_exec_shell
2859	export MPIPROGINF=YES
2860	mpirun -f multinode_config &
2861	wait
2862
2863	fi
2864	elif [[ $host = lcmuk ]]
2865	then
2866
2867	# COPY HOSTFILE FROM SOURCE DIRECTORY OR CREATE IT, IF IT
2868	# DOES NOT EXIST
2869	if [[ -f $hostfile ]]
2870	then
2871	cp $hostfile hostfile
2872	else
2873	(( ii = 1 ))
2874	while (( ii <= $numprocs / $threads_per_task ))
2875	do
2876	echo $localhost_realname >> hostfile
2877	(( ii = ii + 1 ))
2878	done
2879	fi
2880	(( ii = $numprocs / $threads_per_task ))
2881	eval zeile=\"`head -n $ii hostfile`\"
2882	printf "\n *** running on: $zeile"
2883	export OMP_NUM_THREADS=$threads_per_task
2884	if [[ $threads_per_task != 1 ]]
2885	then
2886	printf "\n threads per task: $threads_per_task"
2887	fi
2888	printf "\n\n"
2889	if [[ $scirocco = true ]]
2890	then
2891	mpiexec -machinefile hostfile -n $ii a.out $ROPTS > aout_output 2>&1
2892	else
2893	mpirun -machinefile hostfile -np $ii a.out $ROPTS > aout_output 2>&1
2894	fi
2895	elif [[ $host = decalpha ]]
2896	then
2897	dmpirun -np $numprocs a.out $ROPTS > aout_output 2>&1
2898	elif [[ $host = lctit ]]
2899	then
2900	export runfile=runfile.$kennung
2901
2902	echo "cd $PWD" > $runfile
2903	echo "export OMP_NUM_THREADS=$OMP_NUM_THREADS" >> $runfile
2904	echo "export cpurest=$cpurest" >> $runfile
2905	echo "export fname=$fname" >> $runfile
2906	echo "export localhost=$localhost" >> $runfile
2907	echo "export return_addres=$return_addres" >> $runfile
2908	echo "export return_username=$return_username" >> $runfile
2909	echo "export tasks_per_node=$tasks_per_node" >> $runfile
2910	echo "export write_binary=$write_binary" >> $runfile
2911	echo "export use_seperate_pe_for_dvrp_output=$use_seperate_pe_for_dvrp_output" >> $runfile
2912	echo "./a.out" >> $runfile
2913	chmod u+x $runfile
2914
2915	if [[ "$QUEUE" = interactive ]]
2916	then
2917	mpirun -np $numprocs $runfile $ROPTS > aout_output 2>&1
2918	else
2919	n1ge -fore -mpi $numprocs -q $queue $runfile $ROPTS > aout_output 2>&1
2920	fi
2921
2922	rm $runfile
2923	else
2924	mpprun -n $numprocs a.out $ROPTS > aout_output 2>&1
2925	fi
2926	[[ $? != 0 ]] && execution_error=true
2927
2928
2929	# PERFORMANCE-AUSWERTUNG MIT APPRENTICE
2930	if [[ "$cond1" = apprentice \|\| "$cond2" = apprentice ]]
2931	then
2932	apprentice
2933	fi
2934	else
2935	a.out $ROPTS > aout_output 2>&1
2936	fi
2937	fi
2938	if [[ $? != 0 \|\| $execution_error = true ]]
2939	then
2940
2941	# ABBRUCH BEI LAUFZEITFEHLER
2942	[[ ! ( "$cond1" = debug \|\| "$cond2" = debug ) ]] && cat aout_output
2943	printf "\n +++ runtime error occured"
2944	locat=execution
2945	exit
2946	else
2947	[[ ! ( "$cond1" = debug \|\| "$cond2" = debug ) ]] && cat aout_output
2948	printf "\n$striche\n *** execution finished \n"
2949	fi
2950
2951
2952
2953	# EVENTUELLE OUTPUT-KOMMANDOS ABARBEITEN
2954	(( i = 0 ))
2955	while (( i < ioc ))
2956	do
2957	(( i = i + 1 ))
2958	if (( i == 1 ))
2959	then
2960	printf "\n\n *** execution of OUTPUT-commands:\n$striche"
2961	fi
2962	printf "\n >>> ${out_command[$i]}"
2963	eval ${out_command[$i]}
2964	if (( i == ioc ))
2965	then
2966	printf "\n$striche\n"
2967	fi
2968	done
2969
2970
2971	# EVTL. INHALT DES AKTUELLEN VERZEICHNISSES AUSGEBEN
2972	if [[ $do_trace = true ]]
2973	then
2974	printf "\n\n"
2975	ls -al
2976	fi
2977
2978
2979
2980	# OUTPUT-DATEIEN AN IHRE ZIELORTE KOPIEREN
2981	(( i = 0 ))
2982	while (( i < iout ))
2983	do
2984	(( i = i + 1 ))
2985	if (( i == 1 ))
2986	then
2987	printf "\n\n *** saving OUTPUT-files:\n$striche"
2988	fi
2989
2990	# PRUEFEN, OB EINZELDATEI ODER DATEI PRO PROZESSOR
2991	files_for_pes=false; filetyp=file
2992	if [[ "${actionout[$i]}" = pe && -n $numprocs ]]
2993	then
2994	files_for_pes=true; filetyp=directory
2995	actionout[$i]=""
2996	elif [[ "${actionout[$i]}" = pe && ! -n $numprocs ]]
2997	then
2998	actionout[$i]=""
2999	elif [[ "${actionout[$i]}" = arpe && -n $numprocs ]]
3000	then
3001	files_for_pes=true; filetyp=directory
3002	actionout[$i]="ar"
3003	elif [[ "${actionout[$i]}" = arpe && ! -n $numprocs ]]
3004	then
3005	actionout[$i]="ar"
3006	elif [[ "${actionout[$i]}" = flpe && -n $numprocs ]]
3007	then
3008	files_for_pes=true; filetyp=directory
3009	actionout[$i]="fl"
3010	elif [[ "${actionout[$i]}" = flpe && ! -n $numprocs ]]
3011	then
3012	actionout[$i]="fl"
3013	elif [[ "${actionout[$i]}" = trpe && -n $numprocs ]]
3014	then
3015	files_for_pes=true; filetyp=directory
3016	actionout[$i]="tr"
3017	elif [[ "${actionout[$i]}" = trpe && ! -n $numprocs ]]
3018	then
3019	actionout[$i]="tr"
3020	fi
3021
3022	if [[ ! -f ${localout[$i]} && $files_for_pes = false ]]
3023	then
3024	printf "\n +++ temporary OUTPUT-file ${localout[$i]} does not exist\n"
3025	elif [[ ! -f ${localout[$i]}/_0000 && $files_for_pes = true ]]
3026	then
3027	printf "\n +++ temporary OUTPUT-file ${localout[$i]}/.... does not exist\n"
3028	else
3029
3030
3031	# KOPIEREN PER FTP/SCP (IMMER IM BINAERMODUS, -M: FALLS ZIELKATALOG
3032	# NICHT VORHANDEN, WIRD VERSUCHT, IHN ANZULEGEN), ABER NUR BEI
3033	# REMOTE-RECHNUNGEN
3034	if [[ "${actionout[$i]}" = tr ]]
3035	then
3036	if [[ $localhost != $fromhost ]]
3037	then
3038	if [[ $files_for_pes = false ]]
3039	then
3040	cps=""
3041	cst=""
3042	else
3043	cps=-c
3044	cst="/"
3045	fi
3046	if [[ $localhost = ibmh \|\| $localhost = ibmb \|\| $localhost = nech ]]
3047	then
3048
3049	# TRANSFER IN EIGENSTAENDIGEM JOB
3050	# ZUERST KOPIE DER DATEI INS TEMPORAERE DATENVERZEICHNIS
3051	[[ ! -d $tmp_data_catalog/TRANSFER ]] && mkdir -p $tmp_data_catalog/TRANSFER
3052	file_to_transfer=${fname}_${localout[$i]}_to_transfer_$kennung
3053	if [[ $files_for_pes = false ]]
3054	then
3055	ln -f ${localout[$i]} $tmp_data_catalog/TRANSFER/$file_to_transfer
3056	else
3057	mkdir $tmp_data_catalog/TRANSFER/$file_to_transfer
3058	ln ${localout[$i]}/* $tmp_data_catalog/TRANSFER/$file_to_transfer
3059	fi
3060
3061	echo "set -x" > transfer_${localout[$i]}
3062	echo "cd $tmp_data_catalog/TRANSFER" >> transfer_${localout[$i]}
3063	if [[ $filetransfer_protocol = ftp ]]
3064	then
3065	if [[ $files_for_pes = true ]]
3066	then
3067	printf "\n +++ WARNING: no transfer of catalogs via ftpcopy\n"
3068	fi
3069	printf "\n >>> OUTPUT: ${localout[$i]} by FTP in seperate job to"
3070	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}"
3071	printf "\n or higher cycle\n"
3072	echo "ftpcopy -b -m $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
3073	else
3074	printf "\n >>> OUTPUT: ${localout[$i]}$cst by SCP in seperate job to"
3075	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}$cst"
3076	printf "\n or higher cycle\n"
3077	echo "batch_scp $cps -b -m -u $return_username $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
3078	fi
3079	echo "[[ \$? = 0 ]] && rm $file_to_transfer" >> transfer_${localout[$i]}
3080
3081	if [[ $localhost = nech ]]
3082	then
3083	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 900 -f $filetransfer_protocol transfer_${localout[$i]}
3084	else
3085	if [[ "$LOGNAME" = b323013 ]]
3086	then
3087	subjob -v -q c1 -X 0 -m 1000 -t 900 -f $filetransfer_protocol transfer_${localout[$i]}
3088	else
3089	subjob -d -v -q c1 -X 0 -m 1000 -t 900 -f $filetransfer_protocol transfer_${localout[$i]}
3090	fi
3091	fi
3092
3093	else
3094
3095	# TRANSFER INNERHALB DIESES JOBS
3096	transfer_failed=false
3097	if [[ $filetransfer_protocol = ftp ]]
3098	then
3099	if [[ $files_for_pes = true ]]
3100	then
3101	printf "\n +++ WARNING: no transfer of catalogs via ftpcopy\n"
3102	fi
3103	printf "\n >>> OUTPUT: ${localout[$i]} by FTP to"
3104	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}\n"
3105	ftpcopy -b -m $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
3106	[[ $? != 0 ]] && transfer_failed=true
3107	else
3108	printf "\n >>> OUTPUT: ${localout[$i]}$cst by SCP to"
3109	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}$cst\n"
3110	batch_scp $cps -b -m -u $return_username $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
3111	[[ $? != 0 ]] && transfer_failed=true
3112	fi
3113
3114	# BEI FEHLGESCHLAGENEM TRANSFER SICHERUNGSKOPIE AUF
3115	# LOKALER MASCHINE ANLEGEN
3116	if [[ $transfer_failed = true ]]
3117	then
3118	printf " +++ transfer failed. Trying to save a copy on the local host under:\n"
3119	printf " ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung\n"
3120
3121	# ERSTMAL PRUEFEN, OB VERZEICHNIS EXISTIERT. GEGEBENENFALLS
3122	# ANLEGEN.
3123	eval local_catalog=${pathout[$i]}
3124	if [[ ! -d $local_catalog ]]
3125	then
3126	printf " *** local directory does not exist. Trying to create:\n"
3127	printf " $local_catalog \n"
3128	mkdir -p $local_catalog
3129	fi
3130	eval cp ${localout[$i]} ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung
3131	transfer_problems=true
3132	fi
3133	fi
3134	else
3135
3136	# WERTZUWEISUNG, SO DASS WEITER UNTEN NUR KOPIERT WIRD
3137	actionout[$i]=""
3138	fi
3139	fi
3140
3141
3142	# APPEND PER FTP/SCP (IMMER IM BINAERMODUS, -M: FALLS ZIELKATALOG
3143	# NICHT VORHANDEN, WIRD VERSUCHT, IHN ANZULEGEN), ABER NUR BEI
3144	# REMOTE-RECHNUNGEN
3145	if [[ "${actionout[$i]}" = tra ]]
3146	then
3147	if [[ $localhost != $fromhost ]]
3148	then
3149	if [[ $localhost = ibmh \|\| $localhost = ibmb \|\| $localhost = nech ]]
3150	then
3151
3152	# TRANSFER IN EIGENSTAENDIGEM JOB
3153	# ZUERST KOPIE DER DATEI INS TEMPORAERE DATENVERZEICHNIS
3154	[[ ! -d $tmp_data_catalog/TRANSFER ]] && mkdir -p $tmp_data_catalog/TRANSFER
3155	file_to_transfer=${fname}_${localout[$i]}_to_transfer_$kennung
3156	ln -f ${localout[$i]} $tmp_data_catalog/TRANSFER/$file_to_transfer
3157
3158	echo "set -x" > transfer_${localout[$i]}
3159	echo "cd $tmp_data_catalog/TRANSFER" >> transfer_${localout[$i]}
3160	if [[ $filetransfer_protocol = ftp ]]
3161	then
3162	printf "\n >>> OUTPUT: ${localout[$i]} append by FTP in seperate job to"
3163	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}"
3164	printf "\n or higher cycle\n"
3165	echo "ftpcopy -A -b -m $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
3166	else
3167	printf "\n >>> OUTPUT: ${localout[$i]} append by SCP in seperate job to"
3168	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}"
3169	printf "\n or higher cycle\n"
3170	echo "batch_scp -A -b -m -u $return_username $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
3171	fi
3172	echo "[[ \$? = 0 ]] && rm $file_to_transfer" >> transfer_${localout[$i]}
3173
3174	if [[ $localhost = nech ]]
3175	then
3176	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 900 -f $filetransfer_protocol transfer_${localout[$i]}
3177	else
3178	if [[ $LOGNAME = b323013 ]]
3179	then
3180	subjob -v -q c1 -X 0 -m 1000 -t 900 -f $filetransfer_protocol transfer_${localout[$i]}
3181	else
3182	subjob -d -v -q c1 -X 0 -m 1000 -t 900 -f $filetransfer_protocol transfer_${localout[$i]}
3183	fi
3184	fi
3185
3186	else
3187
3188	# TRANSFER INNERHALB DIESES JOBS
3189	transfer_failed=false
3190	if [[ $filetransfer_protocol = ftp ]]
3191	then
3192	printf "\n >>> OUTPUT: ${localout[$i]} append by FTP to"
3193	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}\n"
3194	ftpcopy -A -b -m $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
3195	[[ $? != 0 ]] && transfer_failed=true
3196	else
3197	printf "\n >>> OUTPUT: ${localout[$i]} append by SCP to"
3198	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}\n"
3199	batch_scp -A -b -m -u $return_username $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
3200	[[ $? != 0 ]] && transfer_failed=true
3201	fi
3202
3203	# BEI FEHLGESCHLAGENEM TRANSFER SICHERUNGSKOPIE AUF
3204	# LOKALER MASCHINE ANLEGEN
3205	if [[ $transfer_failed = true ]]
3206	then
3207	printf " +++ transfer failed. Trying to save a copy on the local host under:\n"
3208	printf " ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung\n"
3209
3210	# ERSTMAL PRUEFEN, OB VERZEICHNIS EXISTIERT. GEGEBENENFALLS
3211	# ANLEGEN
3212	eval local_catalog=${pathout[$i]}
3213	if [[ ! -d $local_catalog ]]
3214	then
3215	printf " *** local directory does not exist. Trying to create:\n"
3216	printf " $local_catalog \n"
3217	mkdir -p $local_catalog
3218	fi
3219
3220	eval cp ${localout[$i]} ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung
3221	transfer_problems=true
3222	fi
3223	fi
3224	else
3225
3226	# WERTZUWEISUNG, SO DASS WEITER UNTEN NUR APPEND AUF
3227	# LOKALER MASCHINE DURCHGEFUEHRT WIRD
3228	actionout[$i]=a
3229	fi
3230	fi
3231
3232
3233	# OUTPUT-DATEI FUER EINEN FORTSETZUNGSLAUF. DATEI WIRD PER
3234	# LINK AUF DEN TEMPORAEREN DATENKATALOG GELEGT. OPTION -f WIRD
3235	# VERWENDET, FALLS DORT NOCH EINE DATEI GLEICHEN NAMENS VORHANDEN
3236	# SEIN SOLLTE. ANSCHLIESSEND WIRD SEINE ARCHIVIERUNG ANGESTOSSEN
3237	if [[ "${actionout[$i]}" = fl ]]
3238	then
3239	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
3240	chmod g+rx $tmp_data_catalog
3241	if [[ $files_for_pes = false ]]
3242	then
3243	printf "\n >>> OUTPUT: ${localout[$i]} to"
3244	printf "\n $tmp_data_catalog/${frelout[$i]} (temporary data catalog)\n"
3245	ln -f ${localout[$i]} $tmp_data_catalog/${frelout[$i]}
3246	else
3247	printf "\n >>> OUTPUT: ${localout[$i]}/.... to"
3248	printf "\n $tmp_data_catalog/${frelout[$i]} (temporary data catalog)\n"
3249	mkdir $tmp_data_catalog/${frelout[$i]}
3250	ln -f ${localout[$i]}/* $tmp_data_catalog/${frelout[$i]}
3251	fi
3252
3253
3254	# ARCHIVIERUNGSJOB WIRD ERZEUGT UND ABGESCHICKT
3255	if [[ $store_on_archive_system = true ]]
3256	then
3257
3258	if [[ $archive_system = asterix ]]
3259	then
3260	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3261	if [[ $files_for_pes = false ]]
3262	then
3263	echo "stageout ${frelout[$i]} > STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3264	else
3265	echo "stageout -t ${frelout[$i]} > STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3266	fi
3267	echo "cat STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3268	echo "if [[ \$(grep -c \"st.msg:150\" STAGE_OUTPUT${i}_$kennung) != 0 ]]" >> archive_${frelout[$i]}
3269	echo "then" >> archive_${frelout[$i]}
3270	echo " do_stageout=false" >> archive_${frelout[$i]}
3271	echo "else" >> archive_${frelout[$i]}
3272	echo " echo \" +++ $filetyp ${frelout[$i]} could not be stored on archive-system\" " >> archive_${frelout[$i]}
3273	echo " cat /dev/null > ~/job_queue/ARCHIVE_ERROR_$fname" >> archive_${frelout[$i]}
3274	echo " cat STAGE_OUTPUT${i}_$kennung > ~/job_queue/archive_${frelout[$i]}_error" >> archive_${frelout[$i]}
3275	echo " echo \" *** $filetyp ${frelout[$i]} will be copied to \$WORK as backup\" " >> archive_${frelout[$i]}
3276	if [[ $files_for_pes = false ]]
3277	then
3278	echo " cp ${frelout[$i]} \$WORK" >> archive_${frelout[$i]}
3279	else
3280	echo " cp -r ${frelout[$i]} \$WORK/${frelout[$i]}" >> archive_${frelout[$i]}
3281	fi
3282	echo " echo \" *** $filetyp ${frelout[$i]} saved\" " >> archive_${frelout[$i]}
3283	echo "fi" >> archive_${frelout[$i]}
3284	echo "rm STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3285	elif [[ $archive_system = DMF ]]
3286	then
3287	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3288	if [[ $files_for_pes = false ]]
3289	then
3290	printf "\n +++ archiving of single files impossible with $archive_system !\n"
3291	locat=DMF
3292	exit
3293	else
3294	# FUER RECHNER IN JUELICH. DORT KOENNTEN AUCH
3295	# EINZELNE DATEIEN GESICHERT WERDEN (SPAETER KORR.)
3296	echo "rm -rf \$ARCHIVE/${frelout[$i]}" >> archive_${frelout[$i]}
3297	echo "cp -r ${frelout[$i]} \$ARCHIVE" >> archive_${frelout[$i]}
3298	fi
3299	elif [[ $archive_system = tivoli ]]
3300	then
3301	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3302	if [[ $files_for_pes = false ]]
3303	then
3304	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3305	echo "set -x" >> archive_${frelout[$i]}
3306	echo "rm -rf \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3307	echo "cp ${frelout[$i]} \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3308	else
3309
3310	echo "set -x" >> archive_${frelout[$i]}
3311	echo "rm -rf \$PERM/${frelout[$i]}/*" >> archive_${frelout[$i]}
3312	echo "[[ ! -d \$PERM/${frelout[$i]} ]] && mkdir $PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3313	cd $tmp_data_catalog
3314	all_files=`ls -1 ${frelout[$i]}/*`
3315	cd - > /dev/null
3316	(( inode = 0 ))
3317	(( tp1 = tasks_per_node + 1 ))
3318	while (( inode < nodes ))
3319	do
3320	# echo "*** all_files = \"$all_files\" "
3321	files=`echo $all_files \| cut -d" " -f1-$tasks_per_node`
3322	all_files=`echo $all_files \| cut -d" " -f$tp1-`
3323	# echo "*** tasks_per_node = \"$tasks_per_node\" "
3324	# echo "*** files = \"$files\" "
3325	# echo "*** all_files = \"$all_files\" "
3326	echo "tar cvf \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar $files" >> archive_${frelout[$i]}
3327	echo "dsmc incremental \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar" >> archive_${frelout[$i]}
3328	echo "dsmmigrate \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar" >> archive_${frelout[$i]}
3329	(( inode = inode + 1 ))
3330	done
3331	# echo "rm -rf \$PERM/${frelout[$i]}.tar" >> archive_${frelout[$i]}
3332	# echo "tar cvf \$PERM/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
3333	fi
3334	elif [[ $archive_system = ut ]]
3335	then
3336	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3337	if [[ $files_for_pes = false ]]
3338	then
3339	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3340	echo "set -x" >> archive_${frelout[$i]}
3341	echo "rm -rf \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3342	echo "cp ${frelout[$i]} \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3343	else
3344
3345	echo "set -x" >> archive_${frelout[$i]}
3346	echo "rm -rf \$UT/${frelout[$i]}/*" >> archive_${frelout[$i]}
3347	echo "[[ ! -d \$UT/${frelout[$i]} ]] && mkdir $UT/${frelout[$i]}" >> archive_${frelout[$i]}
3348	cd $tmp_data_catalog
3349	all_files=`ls -1 ${frelout[$i]}/*`
3350	cd - > /dev/null
3351	(( inode = 0 ))
3352	(( tp1 = tasks_per_node + 1 ))
3353	while (( inode < nodes ))
3354	do
3355	files=`echo $all_files \| cut -d" " -f1-$tasks_per_node`
3356	all_files=`echo $all_files \| cut -d" " -f$tp1-`
3357	echo "tar cvf \$UT/${frelout[$i]}/${frelout[$i]}.node_$inode.tar $files" >> archive_${frelout[$i]}
3358	(( inode = inode + 1 ))
3359	done
3360	fi
3361	elif [[ $archive_system = none ]]
3362	then
3363	printf " +++ archiving on $localhost not available!\n"
3364	fi
3365
3366	if [[ $archive_system != none ]]
3367	then
3368	if [[ $localhost = ibmh \|\| $localhost = ibmb ]]
3369	then
3370	subjob -d -v -q cdata -X 0 -m 1000 -t 7200 -f $filetransfer_protocol archive_${frelout[$i]}
3371	elif [[ $localhost = nech ]]
3372	then
3373	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 7200 -f $filetransfer_protocol archive_${frelout[$i]}
3374	fi
3375	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
3376	fi
3377	else
3378	printf " +++ caution: option -A is switched on. No archiving on $archive_system!\n"
3379	fi
3380
3381
3382	# LEERDATEI IM BENUTZERVERZEICHNIS ANLEGEN, DAMIT BEKANNT IST,
3383	# WIE DIE HOECHSTE ZYKLUSNUMMER AUF DEM ARCHIV-SYSTEM LAUTET
3384	if [[ $files_for_pes = false ]]
3385	then
3386	cat /dev/null > ${pathout[$i]}
3387	else
3388	mkdir -p ${pathout[$i]}
3389	fi
3390
3391	fi
3392
3393
3394	# KOPIEREN AUF LOKALER MASCHINE ZUM ARCHIV-SYSTEM
3395	# AUSSERDEM MUSS LEERDATEI ANGELEGT WERDEN, DAMIT BEKANNT IST,
3396	# WIE DIE HOECHSTE ZYKLUSNUMMER AUF DEM ARCHIV-SYSTEM LAUTET
3397	# FALLS IRGENDEINE (VON MEHREREN) ARCHIVIERUNGEN SCHIEF GEHT,
3398	# WIRD FLAG GESETZT UND BLEIBT AUCH BEI WEITEREN ORDNUNGS-
3399	# GEMAESSEN ARCHIVIERUNGEN GESETZT
3400	if [[ "${actionout[$i]}" = ar ]]
3401	then
3402	if [[ $files_for_pes = false ]]
3403	then
3404	printf "\n >>> OUTPUT: ${localout[$i]} to"
3405	printf "\n ${pathout[$i]}"
3406	printf "\n File will be copied to archive-system ($archive_system) !\n"
3407	else
3408	printf "\n >>> OUTPUT: ${localout[$i]}/_.... to"
3409	printf "\n ${pathout[$i]}"
3410	printf "\n Directory will be copied to archive-system ($archive_system) !\n"
3411	fi
3412	mv ${localout[$i]} ${frelout[$i]}
3413
3414	file_saved=false
3415
3416	if [[ $archive_system = asterix ]]
3417	then
3418	do_stageout=true
3419	(( stageout_anz = 0 ))
3420	while [[ $do_stageout = true ]]
3421	do
3422	if [[ $files_for_pes = false ]]
3423	then
3424	stageout ${frelout[$i]} > STAGE_OUTPUT
3425	else
3426	stageout -t ${frelout[$i]} > STAGE_OUTPUT
3427	fi
3428	cat STAGE_OUTPUT
3429	if [[ $(grep -c "st.msg:150" STAGE_OUTPUT) != 0 ]]
3430	then
3431	file_saved=true
3432	do_stageout=false
3433	else
3434	if [[ $files_for_pes = false ]]
3435	then
3436	printf "\n +++ file ${frelout[$i]} could not be saved on archive-system"
3437	else
3438	printf "\n +++ directory ${frelout[$i]} could not be saved on archive-system"
3439	fi
3440	(( stageout_anz = stageout_anz + 1 ))
3441	if (( stageout_anz == 10 ))
3442	then
3443	printf "\n +++ stoped after 10 unsuccessful tries!"
3444	archive_save=false
3445	do_stageout=false
3446	else
3447	printf "\n *** new try to store on archive after 15 min:"
3448	sleep 900
3449	fi
3450	fi
3451	done
3452	elif [[ $archive_system = DMF ]]
3453	then
3454	if [[ $files_for_pes = false ]]
3455	then
3456	printf "\n +++ archiving of single files impossible on $archive_system!\n"
3457	locat=DMF
3458	exit
3459	else
3460	rm -rf $ARCHIVE/${frelout[$i]}
3461	cp -r ${frelout[$i]} $ARCHIVE
3462	fi
3463	file_saved=true
3464	elif [[ $archive_system = tivoli ]]
3465	then
3466	# ARCHIVIERUNG NUR PER BATCH-JOB MOEGLICH
3467	# DATEI MUSS ZWISCHENZEITLICH INS TEMPORAERE DATENVERZEICHNIS
3468	# GELEGT WERDEN
3469	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
3470	chmod g+rx $tmp_data_catalog
3471	if [[ $files_for_pes = false ]]
3472	then
3473	ln -f ${frelout[$i]} $tmp_data_catalog/${frelout[$i]}
3474	else
3475	mkdir $tmp_data_catalog/${frelout[$i]}
3476	ln -f ${frelout[$i]}/* $tmp_data_catalog/${frelout[$i]}
3477	fi
3478
3479	# BATCH JOB GENERIEREN UND ABSCHICKEN; DATEI MUSS WIEDER
3480	# AUS TEMPORAEREM DATENVERZEICHNIS ENTFERNT WERDEN
3481	echo "cd $tmp_data_catalog" > archive_${frelout[$i]}
3482	if [[ $files_for_pes = false ]]
3483	then
3484	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3485	echo "rm -rf \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3486	echo "cp ${frelout[$i]} \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3487	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3488	else
3489	echo "rm -rf \$PERM/${frelout[$i]}.tar" >> archive_${frelout[$i]}
3490	echo "tar cvf \$PERM/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
3491	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3492	fi
3493
3494	subjob -v -d -q cdata -X 0 -m 1000 -t 7200 -f $filetransfer_protocol archive_${frelout[$i]}
3495	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
3496	file_saved=true
3497
3498	elif [[ $archive_system = ut ]]
3499	then
3500	# ARCHIVIERUNG NUR PER BATCH-JOB MOEGLICH
3501	# DATEI MUSS ZWISCHENZEITLICH INS TEMPORAERE DATENVERZEICHNIS
3502	# GELEGT WERDEN
3503	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
3504	chmod g+rx $tmp_data_catalog
3505	if [[ $files_for_pes = false ]]
3506	then
3507	ln -f ${frelout[$i]} $tmp_data_catalog/${frelout[$i]}
3508	else
3509	mkdir $tmp_data_catalog/${frelout[$i]}
3510	ln -f ${frelout[$i]}/* $tmp_data_catalog/${frelout[$i]}
3511	fi
3512
3513	# BATCH JOB GENERIEREN UND ABSCHICKEN; DATEI MUSS WIEDER
3514	# AUS TEMPORAEREM DATENVERZEICHNIS ENTFERNT WERDEN
3515	echo "cd $tmp_data_catalog" > archive_${frelout[$i]}
3516	if [[ $files_for_pes = false ]]
3517	then
3518	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3519	echo "rm -rf \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3520	echo "cp ${frelout[$i]} \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3521	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3522	else
3523	echo "rm -rf \$UT/${frelout[$i]}.tar" >> archive_${frelout[$i]}
3524	echo "tar cvf \$UT/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
3525	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3526	fi
3527
3528	subjob -v -c /pf/b/$usern/job_queue -d -q pp -X 0 -m 1000 -t 7200 -f $filetransfer_protocol archive_${frelout[$i]}
3529	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
3530	file_saved=true
3531
3532	else
3533	printf "\n +++ archive_system=\"$archive_system\" archiving impossible!"
3534	archive_save=false
3535	fi
3536	if [[ $file_saved = true ]]
3537	then
3538	if [[ $files_for_pes = false ]]
3539	then
3540	cat /dev/null > ${pathout[$i]}
3541	else
3542	mkdir -p ${pathout[$i]}
3543	fi
3544	fi
3545	fi
3546
3547	# APPEND AUF LOKALER MASCHINE
3548	if [[ "${actionout[$i]}" = "a" ]]
3549	then
3550	printf "\n >>> OUTPUT: ${localout[$i]} append to ${pathout[$i]}\n"
3551	cat ${localout[$i]} >> ${pathout[$i]}
3552	fi
3553
3554	# KOPIEREN AUF LOKALER MASCHINE
3555	# ES MUSS KOPIERT WERDEN, DA MOVE NICHT UEBER FILESYSTEM HINAUS MOEGLICH
3556	if [[ "${actionout[$i]}" = "" && $files_for_pes = false ]]
3557	then
3558
3559	# KOPIEREN AUF EINPROZESSORMASCHINE
3560	if [[ "${extout[$i]}" != " " && "${extout[$i]}" != "" ]]
3561	then
3562	printf "\n >>> OUTPUT: ${localout[$i]} to ${pathout[$i]}.${extout[$i]}\n"
3563	cp ${localout[$i]} ${pathout[$i]}.${extout[$i]}
3564	else
3565	printf "\n >>> OUTPUT: ${localout[$i]} to ${pathout[$i]}\n"
3566	cp ${localout[$i]} ${pathout[$i]}
3567	fi
3568
3569	elif [[ "${actionout[$i]}" = "" && $files_for_pes = true ]]
3570	then
3571
3572	# DIE DEN PROZESSOREN EINES PARALLELRECHNERS ZUGEHOERIGEN
3573	# DATEIEN WERDEN ERST IN EINEM KATALOG GESAMMELT UND DIESER
3574	# WIRD DANN KOPIERT
3575	# PER MOVE UMBENANNT WERDEN
3576	printf "\n >>> OUTPUT: ${localout[$i]}/_.... to ${pathout[$i]}\n"
3577	cp -r ${localout[$i]} ${pathout[$i]}
3578
3579	fi
3580	fi
3581	done
3582	if (( i != 0 ))
3583	then
3584	if [[ $transfer_problems = true ]]
3585	then
3586	printf "\n$striche\n *** OUTPUT-files saved"
3587	printf "\n +++ WARNING: some data transfers failed! \n"
3588	else
3589	printf "\n$striche\n *** all OUTPUT-files saved \n"
3590	fi
3591	fi
3592
3593
3594	# EVENTUELL FOLGEJOB STARTEN
3595	# DATEI CONTINUE_RUN MUSS VOM BENUTZERPROGRAMM AUS ERZEUGT WERDEN
3596	if [[ -f CONTINUE_RUN ]]
3597	then
3598
3599	if [[ $archive_save = true ]]
3600	then
3601
3602	# ZUERST IN MRUN-AUFRUF OPTIONEN FUER FORTSETZUNGSLAUF, FUER
3603	# STILLES ABARBEITEN (OHNE INTERAKTIVE RUECKFAGEN) UND FUER
3604	# BATCH-BETRIEB (NUR WICHTIG, FALLS BATCH AUF LOKALER MASCHINE
3605	# DURCHGEFUEHRT WERDEN SOLL) EINFUEGEN, FALLS NICHT BEREITS VOR-
3606	# HANDEN
3607	[[ $(echo $mc \| grep -c "\-C") = 0 ]] && mc="$mc -C"
3608	[[ $(echo $mc \| grep -c "\-v") = 0 ]] && mc="$mc -v"
3609	[[ $(echo $mc \| grep -c "\-b") = 0 ]] && mc="$mc -b"
3610	if [[ $(echo $mc \| grep -c "#") != 0 ]]
3611	then
3612	mc=`echo $mc \| sed 's/#/f/g'`
3613	fi
3614
3615
3616	# JOB STARTEN
3617	printf "\n\n *** initiating restart-run on \"$return_addres\" using command:\n"
3618	echo " $mc"
3619	printf "\n$striche\n"
3620	if [[ $localhost != $fromhost ]]
3621	then
3622
3623	if [[ $localhost = nech \|\| $localhost = ibmb \|\| $localhost = ibmh \|\| $localhost = ibms \|\| $localhost = lctit ]]
3624	then
3625	echo "*** ssh will be used to initiate restart-runs!"
3626	echo " return_addres=\"$return_addres\" "
3627	echo " return_username=\"$return_username\" "
3628	if [[ $return_addres = 172.20.25.41 ]]
3629	then
3630	# WORKAROUND AUF SCIROCCO AM TIT
3631	print "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc " \| ssh $return_addres -l $return_username
3632	else
3633	ssh $return_addres -l $return_username "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc "
3634	fi
3635	else
3636	printf "\n +++ no restart mechanism available for host \"$localhost\" "
3637	locat=restart; exit
3638	fi
3639
3640	# WARTEN, DAMIT SICH RESTART JOB IN QUEUE EINREIHEN KANN, BEVOR
3641	# DER AKTUELLE JOB ENDET
3642	sleep 30
3643
3644	else
3645
3646	# BEI RECHNUNGEN AUF LOKALER MASCHINE KANN MRUN DIREKT AUFGE-
3647	# RUFEN WERDEN
3648	cd $LOCAL_PWD
3649	eval $mc # ' MUESSEN AUSGEWERTET WERDEN
3650	cd - > /dev/null
3651	fi
3652	printf "\n$striche\n *** restart-run initiated \n"
3653
3654
3655	# EVENTUELL INPUT-DATEIEN, DIE VON TEMPORAEREM DATENVERZEICHNIS
3656	# GEHOLT WORDEN SIND, LOESCHEN
3657	(( i = 0 ))
3658	while (( i < iin ))
3659	do
3660	(( i = i + 1 ))
3661	if [[ "${got_tmp[$i]}" = true && $keep_data_from_previous_run = false ]]
3662	then
3663	rm -r $tmp_data_catalog/${frelin[$i]}
3664	fi
3665	done
3666
3667	else
3668
3669	printf "\n +++ no restart-run possible, since errors occured"
3670	printf "\n during the archive process"
3671	fi
3672
3673	fi
3674
3675
3676
3677	# EVTL. EMAIL-BENACHRICHTIGUNG UEBER ABGESCHLOSSENEN LAUF
3678	if [[ "$email_notification" != "" ]]
3679	then
3680
3681	if [[ $localhost != $fromhost ]]
3682	then
3683	if [[ -f CONTINUE_RUN ]]
3684	then
3685	echo "PALM restart run necessary" > email_text
3686	echo "description header of actual run:" >> email_text
3687	cat CONTINUE_RUN >> email_text
3688	echo "mrun-command to restart:" >> email_text
3689	echo "$mc" >> email_text
3690	else
3691	echo "PALM run with base filename \"$fname\" on host \"$localhost\" finished" > email_text
3692	fi
3693	mail $email_notification < email_text
3694	printf "\n *** email notification sent to \"$email_notification\" "
3695	fi
3696	fi
3697
3698
3699
3700	# ALLE ARBEITEN BEENDET. TEMPORAERER KATALOG KANN GELOESCHT WERDEN
3701	cd $HOME
3702	[[ $delete_temporary_catalog = true ]] && rm -rf $TEMPDIR
3703
3704	else
3705
3706
3707	# FALLS AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL, WERDEN JETZT ENTSPRE-
3708	# CHENDE AKTIONEN DURCHGEFUEHRT
3709
3710	# MRUN-BEFEHL FUER REMOTE-MASCHINE ZUSAMMENSTELLEN
3711	mrun_com="$mrun_script_name -a $afname -c $config_file -d $fname -f $filetransfer_protocol -h $host -H $fromhost -m $memory -t $cpumax -q $queue -R $return_addres -U $return_username -u $remote_username"
3712	[[ "$cpp_opts" != "" ]] && mrun_com=${mrun_com}" -D \"$cpp_opts\""
3713	[[ $do_compile = true ]] && mrun_com=${mrun_com}" -s \"$source_list\""
3714	[[ "$input_list" != "" ]] && mrun_com=${mrun_com}" -i \"$input_list\""
3715	[[ $ignore_archive_error = true ]] && mrun_com=${mrun_com}" -I"
3716	[[ $keep_data_from_previous_run = true ]] && mrun_com=${mrun_com}" -k"
3717	[[ "$additional_conditions" != "" ]] && mrun_com=${mrun_com}" -K \"$additional_conditions\""
3718	# [[ "$makefile" != "$source_path/Makefile" ]] && mrun_com=${mrun_com}" -M \"$makefile\""
3719	[[ "$output_list" != "" ]] && mrun_com=${mrun_com}" -o \"$output_list\""
3720	[[ "$read_from_config" = false ]] && mrun_com=${mrun_com}" -S"
3721	[[ $do_trace = true ]] && mrun_com=${mrun_com}" -x"
3722	[[ "$numprocs" != "" ]] && mrun_com=${mrun_com}" -X $numprocs"
3723	if [[ $use_openmp = true ]]
3724	then
3725	mrun_com=${mrun_com}" -O"
3726	[[ "$tasks_per_node" != "" ]] && mrun_com=${mrun_com}" -T $threads_per_task"
3727	else
3728	[[ "$tasks_per_node" != "" ]] && mrun_com=${mrun_com}" -T $tasks_per_node"
3729	fi
3730	[[ $store_on_archive_system = false ]] && mrun_com=${mrun_com}" -A"
3731	[[ $package_list != "" ]] && mrun_com=${mrun_com}" -p \"$package_list\""
3732	[[ $return_password != "" ]] && mrun_com=${mrun_com}" -P $return_password"
3733	[[ $delete_temporary_catalog = false ]] && mrun_com=${mrun_com}" -B"
3734	[[ $node_usage != default ]] && mrun_com=${mrun_com}" -n $node_usage"
3735	if [[ $do_remote = true ]]
3736	then
3737	printf "\n>>>> MRUN-command on execution host:\n>>>> $mrun_com \n"
3738	fi
3739
3740
3741	# ZUSAMMENSTELLUNG DES JOBSCRIPTS AUF DATEI jobfile
3742	jobfile=jobfile.$RANDOM
3743
3744
3745	# TEMPORAERES VERZEICHNIS GENERIEREN UND NACH DORT WECHSELN
3746	echo "mkdir $TEMPDIR" >> $jobfile
3747	echo "cd $TEMPDIR" >> $jobfile
3748
3749
3750	# EVENTUELL FEHLERVERFOLGUNG AKTIVIEREN
3751	if [[ $do_trace = true ]]
3752	then
3753	echo "set -x" >> $jobfile
3754	else
3755	echo "set +vx" >> $jobfile
3756	fi
3757
3758
3759	# ABSPEICHERN DER QUELLTEXTE (NUR FALLS UEBERSETZT WERDEN SOLL)
3760	# SOWIE GEGEBENENFALLS DES MAKEFILES
3761	if [[ $do_compile = true ]]
3762	then
3763
3764	source_catalog=SOURCES_FOR_RUN_$fname
3765
3766	# UNTERVERZEICHNIS FUER QUELLTEXTE UND MAKEFILE ANLEGEN
3767	# MRUN WIRD DIESES VRZEICHNIS UEBER ENVIRONMENT VARIABLE
3768	# MITGETEILT (UEBERSTEUERT ANGABE IN KONFIGURATIONSDATEI)
3769	echo "mkdir SOURCES_FOR_RUN_$fname" >> $jobfile
3770	echo "export SOURCES_COMPLETE=true" >> $jobfile
3771	echo "cd SOURCES_FOR_RUN_$fname" >> $jobfile
3772
3773	for filename in $source_list
3774	do
3775	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
3776	echo "cat > $filename << \"%END%\"" >> $jobfile
3777	cat $source_catalog/$filename >> $jobfile
3778	echo " " >> $jobfile
3779	echo "%END%" >> $jobfile
3780	echo " " >> $jobfile
3781	done
3782
3783	if [[ "$use_makefile" = true ]]
3784	then
3785	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
3786	echo "cat > Makefile << \"%END%\"" >> $jobfile
3787	cat $source_catalog/Makefile >> $jobfile
3788	echo " " >> $jobfile
3789	echo "%END%" >> $jobfile
3790	echo " " >> $jobfile
3791	fi
3792
3793	echo "cd - > /dev/null" >> $jobfile
3794
3795	fi
3796
3797
3798	# ABSPEICHERN DER KONFIGURATIONSDATEI
3799	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
3800	echo "cat > $config_file << \"%END%\"" >> $jobfile
3801	cat $config_file >> $jobfile
3802	echo "%END%" >> $jobfile
3803	echo " " >> $jobfile
3804
3805
3806	# ABSPEICHERN DER AKTUELLEN MRUN-VERSION
3807	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
3808	echo "cat > $mrun_script_name <<\"%END%\"" >> $jobfile
3809	cat ${PALM_BIN}/$mrun_script_name >> $jobfile
3810	echo "%END%" >> $jobfile
3811	if [[ $host = lctit ]]
3812	then
3813	echo "sed 's/bin\/ksh/home2\/usr5\/mkanda\/pub\/ksh/' < $mrun_script_name > mrun_new" >> $jobfile
3814	echo "mv mrun_new $mrun_script_name" >> $jobfile
3815	fi
3816	echo "chmod u+x $mrun_script_name" >> $jobfile
3817	echo "execute_mrun=true" >> $jobfile
3818	echo " " >> $jobfile
3819
3820	# EVTL. BENOETIGTE INPUT-DATEIEN PER FTP HOLEN ODER DEM JOB DIREKT
3821	# MITGEBEN UND AUF DEM REMOTE-RECHNER IM BENUTZERVERZEICHNIS ABLEGEN
3822	# FALLS DIESES NICHT EXISTIERT, WIRD VERSUCHT, DAS JEWEILS LETZTE
3823	# UNTERVERZEICHNIS DES PFADNAMENS ANZULEGEN
3824	if [[ $do_remote = true ]]
3825	then
3826	(( i = 0 ))
3827	while (( i < iin ))
3828	do
3829	(( i = i + 1 ))
3830	echo "[[ ! -d ${pathin[$i]} ]] && mkdir -p ${pathin[$i]}" >> $jobfile
3831	if [[ "${transin[$i]}" = job ]]
3832	then
3833	echo "cat > ${remotepathin[$i]} <<\"%END%\"" >> $jobfile
3834	eval cat ${pathin[$i]}/${frelin[$i]} >> $jobfile
3835	echo " " >> $jobfile
3836	echo "%END%" >> $jobfile
3837	else
3838	if [[ $filetransfer_protocol = ftp ]]
3839	then
3840	echo "ftpcopy -b -o -g -s $return_addres ${remotepathin[$i]} \"${pathin[$i]}\" ${frelin[$i]}" >> $jobfile
3841	else
3842	echo "batch_scp -b -o -g -s -u $return_username $return_addres ${remotepathin[$i]} \"${pathin[$i]}\" ${frelin[$i]}" >> $jobfile
3843	fi
3844	fi
3845
3846	# UEBERPRUEFEN, OB DATEI ANGELEGT WERDEN KONNTE
3847	echo "if [[ \$? = 1 ]]" >> $jobfile
3848	echo "then" >> $jobfile
3849	echo " echo \" \" " >> $jobfile
3850	echo " echo \"+++ file ${remotepathin[$i]} could not be created\" " >> $jobfile
3851	echo " echo \" please check, if directory exists on $host!\" " >> $jobfile
3852	echo " echo \"+++ MRUN will not be continued\" " >> $jobfile
3853	echo " execute_mrun=false" >> $jobfile
3854	echo "fi" >> $jobfile
3855	done
3856	fi
3857
3858	# ARBEITSKATALOG AUF DER LOKALEN MASCHINE FUER EVENTUELLE
3859	# FORTSETZUNGSLAUEFE PER ENV-VARIABLE UEBERGEBEN
3860	echo "LOCAL_PWD=$working_directory" >> $jobfile
3861	echo "export LOCAL_PWD" >> $jobfile
3862
3863	# EBENSO LOKALEN MRUN-KATALOG UEBERGEBEN
3864	echo "LOCAL_MRUN_PATH=$PALM_BIN" >> $jobfile
3865	echo "export LOCAL_MRUN_PATH" >> $jobfile
3866
3867	# WORKAROUND FUER RIAM-NEC-JOBS WEGEN PROFILE-SCHWIERIGKEITEN
3868	if [[ $localhost_realname = "gate" ]]
3869	then
3870	echo "export PALM_BIN=$PALM_BIN" >> $jobfile
3871	fi
3872
3873	# MRUN AUF ZIELRECHNER AUFRUFEN
3874	echo "set -x" >> $jobfile
3875	echo "[[ \$execute_mrun = true ]] && ./$mrun_com" >> $jobfile
3876
3877	echo 'ls -al; echo `pwd`' >> $jobfile
3878	echo "cd \$HOME" >> $jobfile
3879	echo "rm -rf $TEMPDIR" >> $jobfile
3880
3881
3882
3883
3884	# JOB PER SUBJOB STARTEN
3885	if [[ $silent = false ]]
3886	then
3887	printf "\n "
3888	else
3889	printf "\n\n"
3890	fi
3891
3892	subjob $job_on_file -h $host -u $remote_username -q $queue -m $memory -N $node_usage -t $cpumax $XOPT $TOPT $OOPT -n $fname -f $filetransfer_protocol -v $jobfile
3893	rm -rf $jobfile
3894
3895
3896	fi # ENDE REMOTE-TEIL
3897
3898
3899
3900	# ENDE DER PROZEDUR

Note: See TracBrowser for help on using the repository browser.

Download in other formats:

| Impressum | ©Leibniz Universität Hannover |