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source: palm/trunk/SCRIPTS/mrun @ 66

Last change on this file since 66 was 66, checked in by raasch, 17 years ago
Rev properties set fro scripts, small adjustments for RIAM, fimm (Igor) admitted
Property svn:keywords set to `Rev`
File size: 147.6 KB

Line
1	#!/bin/ksh
2
3	##!/home/DSRC/NC/tatuyama/pub/ksh NEEDED ON NEC AT RIAM !!!!!!!!!!
4
5	# mrun - Plot-Shellskript
6	# $Id: mrun 61 2007-03-12 05:42:06Z raasch $
7
8	# Prozedur zum Starten von Modellaeufen
9
10	# letzte Aenderung:
11	# 03/03/94 - Siggi - Entwicklungsbeginn
12	# 21/03/94 - Siggi - Entwicklungsabschluss (Version 1.0)
13	# 09/12/94 - Siggi - allexport unterbunden; statt dessen werden jetzt ein-
14	# zelne Variable exportiert. Dies ist noetig, weil an-
15	# sonsten irgendein Speicher ueberlaeuft und von mrun
16	# aufgerufene Programme (z.B. stageout) mit Fehlern
17	# abbrechen (too many arguments)
18	# 20/06/95 - Siggi - noclobber muss explizit abgeschaltet, da jetzt
19	# defaultmaessig im RRZN-Profile eingeschaltet
20	# 10/06/97 - Siggi - Zusaetzliche Option -C bei cpp, damit // nicht
21	# wegfallen
22	# 25/04/00 - Siggi - Version 1.5
23	# remote_addres und remote_user in return_addres bzw.
24	# return_username umbenannt, return_username wird dem
25	# mrun-Aufruf im Job ueber Option -U mitgegeben.
26	# Neue Variable remote_username, die beim interaktiven
27	# mrun-Aufruf zwingend ueber die neue Option -u oder
28	# in der Konfigurationsdatei angegeben werden muss.
29	# 08/02/01 - Siggi - Alle mrun-Meldungen ins englische uebersetzt,
30	# Version 1.7
31	# 05/05/02 - Siggi - Uebersetzungen mittels make-Mechanismus moeglich
32	# 21/11/02 - Siggi - ENV-Variable XLFRTEOPTS wird vor Ausfuehrung auf
33	# IBM gesetzt, um Record-Laenge der NAMELIST-Dateien,
34	# zu bestimmen; Praeprozessoroptionen haben nun alle
35	# die Form -Dtext=text, weil auf IBM sonst text durch
36	# die leere Zeichenkette ersetzt wird
37	# 01/08/03 - Siggi - Test of implementing dvrp+1PE on ibm
38	# 07/01/04 - Siggi - additional preprocessor directive for ibm included
39	# (-D$OMP=OMP) in order to avoid problems with
40	# OMP_NUM_THREADS
41	# 04/01/05 - Siggi - archiving on hanni and berni is done in separate
42	# tar files, one for each node used
43	# 07/01/04 - Siggi - old code for t3e, vpp and hpcs eliminated
44	# 09/01/05 - Siggi - workaround for getting the IP address on gfdl3
45	# 17/01/05 - Siggi - job for data transfer to local machine now within
46	# job class c1 (HLRN)
47	# 27/01/05 - Siggi - IP address workaround for gfdl3 removed
48	# 28/01/05 - Siggi - tar-filenames on $PERM (HLRN) now include the
49	# base filename and cycle number
50	# 16/02/05 - Gerald - hababai validated
51	# 14/03/05 - Siggi - abort on NEC after first runtime error (F_ERRCNT)
52	# 29/03/05 - Marcus - berni*-en0 validated
53	# 21/04/05 - Siggi - transfer-job-protocol for avs-data is no more stored
54	# 24/04/05 - Siggi - netcdf support on lcmuk
55	# 25/04/05 - Siggi - netcdf support on gfld3 (decalpha)
56	# 11/05/05 - Siggi - files with non-numeric extensions (.xxx after cycle
57	# number) can now be used within interactive runs
58	# 12/05/05 - Siggi - netcdf support on ibm
59	# 13/05/05 - Siggi - error in tar-filenames on $PERM (HLRN) removed
60	# 18/05/05 - Siggi - netcdf support on nec
61	# 24/05/05 - Siggi - netcdf support on ibms
62	# 14/06/05 - Siggi - sleep interval after submit of restart job increased
63	# to 30 seconds
64	# 28/06/05 - Siggi - bora adjusted to new intel compiler (LD_LIBRARY_
65	# PATH is temporarily set)
66	# 07/09/05 - Siggi - setting of MP_EAGER_LIMIT switched off because it
67	# caused warnings in the job protocol
68	# 20/10/05 - Siggi - update of netcdf-version on decalpha (gfdl3)
69	# 25/10/05 - Siggi - error in listing files for getting the cycle number
70	# removed
71	# 26/10/05 - Siggi - new paths for dvrp-library, transfer of catalogs
72	# realized by file attribute trpe
73	# 28/10/05 - Siggi - if existing, the file extension is output in case
74	# of missing input file - no job abort in case of
75	# missing input files with file extensions
76	# (preliminary solution)
77	# 31/10/05 - Siggi - data transfer from nech now within seperate job
78	# 04/11/05 - Siggi - netcdf 3.6.0-p1 on ibmh/ibmb
79	# 07/12/05 - Siggi - gallego and elephanta admitted
80	# 30/12/05 - Siggi - gfdl5 (ibmy) admitted
81	# 10/01/06 - Siggi - cpp directive for NetCDF 64bit support
82	# 20/01/06 - Siggi - cpp directive for ibmy
83	# 09/02/06 - Siggi - ibmy admitted for batch mode
84	# 13/04/06 - Siggi - ostria admitted
85	# 18/04/06 - Siggi - usage of OpenMP implemented (additional option -O)
86	# 10/05/06 - Siggi - environment variable XLSMPOPTS set on IBM for
87	# optimization of OpenMP runs (option stacksize is
88	# necessary for large gridpoint numbers because
89	# otherwise a segmentation fault occurs)
90	# 23/05/05 - Siggi - lctit (SUN Fire X4600) admitted
91	# 21/08/06 - Siggi - standard mrun path on scirocco is as on bora
92	# 23/08/06 - Siggi - netcdf support for scirocco (notebook)
93	# 20/09/06 - Marcus - add DVRP library on nech
94	# 24/10/06 - Siggi - Environment variables for PALM steering are written
95	# on local NAMELIST file ENVPAR
96	# 24/11/06 - Siggi - levanto admitted, maestro switched to ifc 9.1
97	# 28/11/06 - Siggi - call to interpret_config.x_levanto because of SuSe 10
98	# 06/02/07 - Siggi - add DVRP library on lcmuk
99	# 07/02/07 - Siggi - revision of source code handling, source code is
100	# now expected in directory given by source_path and
101	# not in the current working directory, source code
102	# files provided in add_source_path are allways
103	# compiled, source code to be compiled is allways
104	# sampled in SOURCES_FOR_RUN_$fname which is a
105	# subdirectory of the current working directory,
106	# -s TEST changed to -s WRITE_PERMIT or -s WP,
107	# adapted for RIAM (neck)
108	# bugfix for cycle number of output file (extout)
109	# all hpmuk-related code removed
110	# 14/02/07 - Siggi - dvrp support for neck added
111	# 28/02/07 - Siggi - empty lines in configuration file are accepted
112	# mrun_path replaced by PALM_BIN,
113	# all machines are calling interpret_config.x
114	# 14/03/07 - Siggi - fimm admitted, revision number added to terminal
115	# output
116
117
118
119
120	# VARIABLENVEREINBARUNGEN + DEFAULTWERTE
121
122	set +o allexport # SICHERHEITSHALBER UNTERBINDEN, DA SONST EVTL. STAGEOUT
123	# NICHT LAUEFT (TOO MANY ARGUMENTS - PROBLEM)
124	set +o noclobber # EXISTIERENDE DATEIEN DUERFEN UEBERSCHRIEBEN WERDEN
125
126	AddFilenames=""
127	additional_conditions=""
128	add_source_path=""
129	afname=""
130	archive_save=true
131	archive_system=none
132	compiler_name=""
133	cond1=""
134	cond2=""
135	config_file=.mrun.config
136	cpp_opts=""
137	cpumax=0
138	cpurest=0
139	delete_temporary_catalog=true
140	do_batch=false
141	do_compile=true
142	do_remote=false
143	do_stagein=true
144	do_stageout=true
145	do_trace=false
146	email_notification=""
147	exclude=""
148	executable=""
149	execution_error=false
150	filetransfer_protocol=""
151	fname=test
152	fromhost=""
153	host=""
154	host_file=""
155	hp=""
156	ignore_archive_error=false
157	input_list=""
158	interpreted_config_file=""
159	job_on_file=""
160	keep_data_from_previous_run=false
161	localhost_realname=$(hostname)
162	local_compile=false
163	locat=normal
164	mainprog=""
165	makefile=""
166	mc=$0
167	while [[ $(echo $mc \| grep -c "/") != 0 ]]
168	do
169	mc=`echo $mc \| cut -f2- -d"/"`
170	done
171	module_files=""
172	MODULE_OPTIONS=""
173	mrun_script_name=$mc
174	netcdf_support=false
175	node_usage=default
176	numprocs=""
177	OOPT=""
178	openmp=false
179	output_list=""
180	package_list=""
181	punkte="..........................................................."
182	queue=none
183	read_from_config=""
184	restart_run=false
185	return_addres=$(nslookup `hostname` 2>&1 \| grep "Address:" \| tail -1 \| awk '{print $2}')
186	if [[ $return_addres = 130.75.105.158 ]]
187	then
188	return_addres=172.20.25.41
189	echo "+++ WARNING: return_addres changed to $return_addres !!!!!"
190	fi
191	# if [[ $return_addres = 210.117.65.1 ]]
192	# if [[ $(nslookup `hostname` 2>&1 \| grep -c 210.117.65.1) = 1 ]]
193	# then
194	# [[ $localhost_realname = gfdl3.yonsei.ac.kr ]] && return_addres=165.132.26.56
195	# fi
196	return_password=""
197	return_username=$LOGNAME
198	remotecall=false
199	remote_username=""
200	run_mode=""
201	scirocco=false
202	store_on_archive_system=true
203	striche=" ----------------------------------------------------------------------------"
204	silent=false
205	source_list=""
206	source_path=SOURCE
207	tasks_per_node=""
208	threads_per_task=1
209	tmpcreate=false
210	tmp_data_catalog=""
211	transfer_problems=false
212	usern=$LOGNAME
213	use_makefile=""
214	working_directory=`pwd`
215	TOPT=""
216	XOPT=""
217	zeit=$( date \| cut -c 12-19 )
218
219	typeset -i iec=0 iic=0 iin=0 ioc=0 iout=0 memory=0 stagein_anz=0 stageout_anz=0
220	typeset -i cputime i ii icycle inode ival jobges jobsek maxcycle minuten nodes pes sekunden tp1
221
222	typeset -R30 calltime
223	typeset -L20 spalte1
224	typeset -L40 spalte2
225	typeset -L60 spalte3
226	typeset -L35 string1=`date`
227	typeset -L12 string2=$usern
228	typeset -L12 string3=$localhost_realname
229	typeset -L12 string4
230	typeset -L12 string5
231	typeset -L30 version="MRUN 2.0 $Rev: 66 $"
232
233
234
235	# EINZELNE VARIABLE FUER HAUPTPROGRAMM EXPORTIEREN
236	export cpurest fname host localhost return_addres return_username remotecall tasks_per_node
237
238	# FOLGENDE VARIABLEN MUESSEN FUER DIE INTERPRETATION DER KONFIGURATIONSDATEI
239	# EXPORTIERT WERDEN
240	export afname config_file cpp_opts cpumax do_batch do_trace fname fromhost
241	export input_list memory numprocs output_list queue run_mode
242
243
244
245	# FEHLERBEHANDLUNG
246	# BEI EXIT:
247	trap 'if [[ $locat != localhost ]]
248	then
249	# if [[ ! -f ${mrun_path}/statistik/mrun_statistik ]]
250	# then
251	# cat > ${mrun_path}/statistik/mrun_statistik << %STATEND%
252	#MRUN-calls on $localhost
253	#
254	#date and time user localhost remotehost termination mrun-command
255	#--------------------------------------------------------------------------------------------------------------------
256	#%STATEND%
257	# chmod 666 ${mrun_path}/statistik/mrun_statistik
258	# fi
259	#
260	# # EINTRAG IN DIE STATISTIK-DATEI
261	# string4=$host
262	# string5=$locat
263	# if [[ "$job_on_file" = "" && $locat != control_c && $locat != user_abort ]]
264	# then
265	# if [[ $do_batch = true ]]
266	# then
267	# printf "$string1$string2$string3$string4$string5$mrun_com \n" >> ${mrun_path}/statistik/mrun_statistik
268	# else
269	# printf "$string1$string2$string3$string4$string5$mc \n" >> ${mrun_path}/statistik/mrun_statistik
270	# fi
271	# fi
272	continue
273	fi
274
275	if [[ $locat != normal && $locat != control_c && $locat != local_compile ]]
276	then
277
278	# EVENTUELLE ERROR-KOMMANDOS ABARBEITEN
279	(( i = 0 ))
280	while (( i < iec ))
281	do
282	(( i = i + 1 ))
283	printf "\n *** Execution of ERROR-command:\n"
284	printf " >>> ${err_command[$i]}\n"
285	eval ${err_command[$i]}
286	done
287	if [[ -n $interpreted_config_file ]] then
288	rm -rf $interpreted_config_file
289	fi
290	if [[ $tmpcreate = true ]]
291	then
292	printf "\n *** Contents of \"$TEMPDIR\":\n"
293	ls -al; cd
294	[[ $delete_temporary_catalog = true ]] && rm -rf $TEMPDIR
295	fi
296	if [[ -f ~/job_queue/JOBINFO.$QSUB_REQID ]]
297	then
298	rm -rf ~/job_queue/JOBINFO.$QSUB_REQID
299	fi
300	printf "\n\n+++ MRUN killed \n\n"
301	elif [[ $locat != control_c ]]
302	then
303	printf "\n\n --> all actions finished\n\n"
304	printf " Bye, bye $usern !!\n\n"
305	fi' exit
306
307
308	# BEI TERMINAL-BREAK:
309	trap '[[ $tmpcreate = true ]] && (cd; rm -rf $TEMPDIR)
310	if [[ -f ~/job_queue/JOBINFO.$QSUB_REQID ]]
311	then
312	rm -rf ~/job_queue/JOBINFO.$QSUB_REQID
313	fi
314	printf "\n+++ MRUN killed by \"^C\" \n\n"
315	locat=control_c
316	exit
317	' 2
318
319
320	# CHECK IF THE PATH FOR THE PALM BINARIES (SCRIPTS+UTILITY-PROGRAMS) HAS
321	# BEEN SET
322	if [[ "$PALM_BIN" = "" ]]
323	then
324	printf "\n +++ environment variable PALM_BIN has not been set"
325	printf "\n please set it to the directory where the PALM scripts are located"
326	locat=palm_bin; exit
327	fi
328
329
330	# EVTL. NAMEN DES LOKALEN RECHNERS MIT UEBERGREIFENDEM NAMEN VERSEHEN
331	case $localhost_realname in
332	(atmos) localhost=lcide;;
333	(bora\|breva\|elephanta\|gallego\|gregale\|hababai\|irifi\|levanto\|maestro\|orkan\|ostria\|poniente\|quanero\|scirocco\|vorias) localhost=lcmuk;;
334	(breg-en0\|berni-en0) localhost=ibmb; archive_system=tivoli;;
335	(cs*) localhost=nech; archive_system=ut;;
336	(fimm.bccs.uib.no) local_host=lcmuk;;
337	(gate\|n-sx) PATH=$PALM_BIN:$PATH:/usr/bin/nqsII; localhost=neck;;
338	(ground.yonsei.ac.kr) localhost=decalpha;;
339	(gfdl3.yonsei.ac.kr) localhost=decalpha;;
340	(gfdl5) localhost=ibmy;;
341	(hreg-en0\|hanni-en0) localhost=ibmh; archive_system=tivoli;;
342	(nobel*) localhost=ibms;;
343	(sun1\|sun2) localhost=unics;;
344	(tgg*) localhost=lctit;;
345	(*) printf "\n +++ Host \"$localhost_realname\" not admitted for mrun \n"
346	locat=localhost; exit;;
347	esac
348
349	[[ $localhost_realname = scirocco ]] && scirocco=true
350
351
352
353	# SHELLSCRIPT-OPTIONEN EINLESEN UND KOMMANDO NEU ZUSAMMENSETZEN, FALLS ES
354	# FUER FOLGEJOBS BENOETIGT WIRD
355	while getopts :a:AbBc:Cd:D:f:Fh:H:i:IkK:m:M:n:o:Op:P:q:r:R:s:St:T:u:U:vxX: option
356	do
357	case $option in
358	(a) afname=$OPTARG;;
359	(A) store_on_archive_system=false; mc="$mc -A";;
360	(b) do_batch=true; mc="$mc -b";;
361	(B) delete_temporary_catalog=false; mc="$mc -B";;
362	(c) config_file=$OPTARG; mc="$mc -c$OPTARG";;
363	(C) restart_run=true; mc="$mc -C";;
364	(d) fname=$OPTARG; mc="$mc -d$OPTARG";;
365	(D) cpp_opts="$cpp_opts $OPTARG"; mc="$mc -D$OPTARG";;
366	(f) filetransfer_protocol=$OPTARG; mc="$mc -f$OPTARG";;
367	(F) job_on_file="-D"; mc="$mc -F";;
368	(h) host=$OPTARG; mc="$mc -h$OPTARG";;
369	(H) fromhost=$OPTARG; mc="$mc -H$OPTARG";;
370	(i) input_list=$OPTARG; mc="$mc -i'$OPTARG'";;
371	(I) ignore_archive_error=true; mc="$mc -I";;
372	(k) keep_data_from_previous_run=true; mc="$mc -k";;
373	(K) additional_conditions="$OPTARG"; mc="$mc -K$OPTARG";;
374	(m) memory=$OPTARG; mc="$mc -m$OPTARG";;
375	(M) makefile=$OPTARG; mc="$mc -M$OPTARG";;
376	(n) node_usage=$OPTARG; mc="$mc -n$OPTARG";;
377	(o) output_list=$OPTARG; mc="$mc -o'$OPTARG'";;
378	(O) use_openmp=true; mc="$mc -O";;
379	(p) package_list=$OPTARG; mc="$mc -p'$OPTARG'";;
380	(P) return_password=$OPTARG; mc="$mc -P$OPTARG";;
381	(q) queue=$OPTARG; mc="$mc -q$OPTARG";;
382	(r) run_mode=$OPTARG; mc="$mc -r'$OPTARG'";;
383	(R) remotecall=true;return_addres=$OPTARG; mc="$mc -R$OPTARG";;
384	(s) source_list=$OPTARG; mc="$mc -s'$OPTARG'";;
385	(S) read_from_config=false; mc="$mc -S";;
386	(t) cpumax=$OPTARG; mc="$mc -t$OPTARG";;
387	(T) tasks_per_node=$OPTARG; mc="$mc -T$OPTARG";;
388	(u) remote_username=$OPTARG; mc="$mc -u$OPTARG";;
389	(U) return_username=$OPTARG; mc="$mc -U$OPTARG";;
390	(v) silent=true; mc="$mc -v";;
391	(x) do_trace=true;set -x; mc="$mc -x";;
392	(X) numprocs=$OPTARG; mc="$mc -X$OPTARG";;
393	(\?) printf "\n +++ unknown option $OPTARG \n"
394	printf "\n --> type \"$0 ?\" for available options \n"
395	locat=parameter;exit;;
396	esac
397	done
398
399
400	# EVTL. POSITIONSPARAMETER EINLESEN
401	# ZUR ZEIT GIBT ES NUR DEN PARAMETER ? (=KURZINFO)
402	shift OPTIND-1
403
404
405	# KURZE AUFRUFBESCHREIBUNG WIRD HIER AUSGEGEBEN
406	if [[ "$1" = "?" ]]
407	then
408	(printf "\n *** mrun can be called as follows:\n"
409	printf "\n $mrun_script_name -b -c.. -d.. -D.. -f.. -F -h.. -i.. -I -K.. -m.. -o.. -p.. -r.. -R -s.. -t.. -T.. -v -x -X.. <modus>\n"
410	printf "\n Description of available options:\n"
411	printf "\n Option Description Default-Value"
412	printf "\n -a base name of input files equiv. -d"
413	printf "\n -A no archiving when using file-attribute fl"
414	printf "\n -b batch-job on local machine ---"
415	printf "\n -B do not delete temporary directory at end ---"
416	printf "\n -c configuration file .mrun.config"
417	printf "\n -d base name of files attached to program test"
418	printf "\n -D preprocessor(cpp)-directives \"\" "
419	printf "\n -f filetransfer protocol (ftp or scp) depending on -h"
420	printf "\n -F create remote job file only ---"
421	printf "\n -h execution host $localhost_realname"
422	printf "\n -i INPUT control list \"\" "
423	printf "\n -I archiving errors of previous batch-jobs"
424	printf "\n will be ignored"
425	printf "\n -k keep data from previous run"
426	printf "\n -K additional conditions for controling"
427	printf "\n usage of conditional code and"
428	printf "\n env-variables in configuration file \"\" "
429	printf "\n -m memory demand in MB (batch-jobs) 0 MB"
430	printf "\n -M Makefile name Makefile"
431	printf "\n -n node usage (shared/not_shared) depending on -h"
432	printf "\n -o OUTPUT control list \"\" "
433	printf "\n -O use OpenMP ---"
434	printf "\n -p software package list \"\" "
435	printf "\n -q queue \"$queue\" "
436	printf "\n -r run control list (combines -i -o) \"\" "
437	printf "\n -s filenames of routines to be compiled \"\" "
438	printf "\n must end with .f, .f90, .F, or .c !"
439	printf "\n use \"..\" for more than one file and wildcards"
440	printf "\n -s TEST compiles all files with w-permit"
441	printf "\n -S config file interpreted by shellscript ---"
442	printf "\n -t allowed cpu-time in seconds (batch) 0"
443	printf "\n -T tasks per node depending on -h"
444	printf "\n -u username on remote machine \"\" "
445	printf "\n -v no prompt for confirmation ---"
446	printf "\n -x tracing of mrun for debug purposes ---"
447	printf "\n -X # of processors (on parallel machines) 1"
448	printf "\n "
449	printf "\n Possible values of positional parameter <modus>:"
450	printf "\n \"?\" - this outline \n\n") \| more
451	exit
452	elif [[ "$1" != "" ]]
453	then
454	printf "\n +++ positional parameter $1 unknown \n"
455	locat=parameter; exit
456	fi
457
458
459
460	# KURZE STARTMELDUNG
461	printf "\n*** $version "
462	printf "\n will be executed. Please wait ..."
463
464
465	# BASISNAME DER INPUT-DATEIEN GLEICH ALLGEMEINEM BASISNAMEN SETZEN,
466	# WENN NICHT VOM BENUTZER ANDERS BESTIMMT
467	[[ "$afname" = "" ]] && afname=$fname
468
469
470	# EVTL. RUN-MODUS DEN I/O-LISTEN HINZUFUEGEN
471	if [[ "$run_mode" != "" ]]
472	then
473	input_list="$input_list $run_mode"
474	output_list="$output_list $run_mode"
475	fi
476
477
478	# RECHNERNAMEN ABSPEICHERN, VON DEM AUS JOB GESTARTET WIRD,
479	# ALLERDINGS NUR DANN, WENN NICHT PER OPTION -H BEREITS EIN WERT
480	# ZUGEWIESEN WURDE (MRUN MACHT DIES IMMER, WENN ES SELBST BATCH-JOBS
481	# STARTET)
482	if [[ "$fromhost" = "" ]]
483	then
484	fromhost=$localhost
485	fi
486
487
488	# PRUEFEN, OB MRUN NUR TESTWEISE AUF DER LOKALEN MASCHINE KOMPILIEREN SOLL
489	if [[ "$source_list" = LOCAL_COMPILE_TEST ]]
490	then
491	source_list=TEST
492	local_compile=true
493	host=$localhost
494	fi
495
496
497	# PRUEFEN, OB AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL
498	# WERT VON do_remote WIRD FUER DATEIVERBINDUNGEN BENOETIGT.
499	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
500	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
501	if [[ -n $host && "$host" != $localhost ]]
502	then
503	do_batch=true
504	do_remote=true
505	case $host in
506	(ibm\|ibmb\|ibmh\|ibms\|ibmy\|nech\|neck\|lctit\|unics) true;;
507	(*) printf "\n"
508	printf "\n +++ execution host \"$host\" not admitted for MRUN,"
509	printf "\n or NQS not available on execution host!"
510	locat=nqs; (( iec = 0 )); exit;;
511	esac
512	else
513	host=$localhost
514	fi
515
516
517	# ZUSATZBEDINGUNGEN (OPTION -K) AUSWERTEN
518	if [[ -n $additional_conditions ]]
519	then
520	echo $additional_conditions \| cut -d" " -f1-3 \| read cond1 cond2 dummy
521	# cond1=`echo $additional_conditions \| cut -d" " -f1`
522	# cond2=`echo $additional_conditions \| cut -d" " -s -f2`
523	# dummy=`echo $additional_conditions \| cut -d" " -s -f3`
524	if [[ -n $dummy ]]
525	then
526	printf "\n +++ more than 2 additional conditions given for Option \"-K\""
527	locat=options; exit
528	fi
529	fi
530
531
532	# PRUEFEN, OB EVTL. BEI VORHERGEHENDEM LAUF (KETTENJOB) EINE
533	# ARCHIVIERUNG FEHLGESCHLAGEN IST
534	if [[ -f ~/job_queue/ARCHIVE_ERROR_$fname ]]
535	then
536	if [[ $ignore_archive_error = false ]]
537	then
538	printf "\n +++ data archiving of previous run failed"
539	printf "\n see directory \~/job_queue on remote machine"
540	locat=archive; exit
541	else
542	printf "\n +++ warning: data archiving in a previous run failed"
543	printf "\n MRUN continues, trying to get backup copy"
544	fi
545	fi
546
547
548	# PRUEFEN, OB KONFIGURATIONS-DATEI VORHANDEN
549	if [[ ! -f $config_file ]]
550	then
551	printf "\n\n +++ configuration file: "
552	printf "\n $config_file"
553	printf "\n does not exist"
554	locat=connect; exit
555	fi
556
557
558
559	# LESEN UND INTERPRETIEREN DER KONFIGURATIONS-DATEI VOM SHELLSCRIPT AUS
560	# VORUEBERGEHEND ZWINGEND AUF LINUX-RECHNERN
561	if [[ "$read_from_config" = false ]]
562	then
563
564	[[ $silent = false ]] && printf "\n Reading the configuration file... "
565	while read zeile
566	do
567	[[ $silent = false ]] && printf "."
568
569
570	# ZUERST EVENTUELL VORKOMMENDE ENVIRONMENT-VARIABLEN DURCH IHRE WERTE
571	# ERSETZEN
572	eval zeile=\"$zeile\"
573
574
575	# INTERPRETATION DER ZEILE
576	if [[ "$(echo $zeile)" = "" ]]
577	then
578	# LEERZEILE, KEINE AKTION
579	continue
580
581	elif [[ "$(echo $zeile \| cut -c1)" = "#" ]]
582	then
583
584	# ZEILE IST KOMMENTARZEILE
585	true
586
587	elif [[ "$(echo $zeile \| cut -c1)" = "%" ]]
588	then
589
590	# ZEILE DEFINIERT ENVIRONMENT-VARIABLE
591	zeile=$(echo $zeile \| cut -c2-)
592	echo $zeile \| cut -d" " -f1-5 \| read var value for_host for_cond1 for_cond2
593	# var=`echo $zeile \| cut -d" " -f1`
594	# value=`echo $zeile \| cut -d" " -s -f2`
595	# for_host=`echo $zeile \| cut -d" " -s -f3`
596	# for_cond1=`echo $zeile \| cut -d" " -s -f4`
597	# for_cond2=`echo $zeile \| cut -d" " -s -f5`
598
599	if [[ "$for_host" = "" \|\| ( "$for_host" = $host && "$for_cond1" = "$cond1" && "$for_cond2" = "$cond2" ) \|\| $(echo "$input_list$output_list"\|grep -c "$for_host") != 0 ]]
600	then
601
602	# BEI COMPILER- CPP- ODER LINKEROPTIONEN EVTL ":" DURCH " "
603	# ERSETZEN. "::" WIRD DURCH ":" ERSETZT.
604	value=`echo $value \| sed 's/::/%DUM%/g' \| sed 's/:/ /g' \| sed 's/%DUM%/:/g'`
605
606
607	# ENVIRONMENT-VARIABLE WIRD WERT AUS KONFIGURATIONSDATEI
608	# ZUGEWIESEN, WENN SIE SELBST NOCH KEINEN WERT UEBER DIE
609	# ENTSPRECHENDE SCRIPT-OPTION ERHALTEN HAT. SOLCHE
610	# VARIABLEN HAETTEN DANN DEN WERT "" ODER IM INTEGER-FALL DEN
611	# WERT 0. ALLGEMEINE REGEL ALSO: SCRIPT-OPTION GEHT UEBER
612	# KONFIGURATIONSDATEI
613	if [[ "$(eval echo \$$var)" = "" \|\| "$(eval echo \$$var)" = "0" ]]
614	then
615	eval $var=\$value
616
617	# EVTL. BILDSCHIRMAUSGABEN DER ENVIRONMENT-VARIABLEN
618	if [[ $do_trace = true ]]
619	then
620	printf "\n*** ENVIRONMENT-VARIABLE $var = $value"
621	fi
622	fi
623
624	# WENN ENVIRONMENT-VARIABLE HOST VEREINBART, DANN SOFORT AUSWERTEN
625	# WERT VON do-remote WIRD BEI DATEIVERBINDUNGEN BENOETIGT
626	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
627	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
628	if [[ $var = host ]]
629	then
630	if [[ -n $host && "$host" != $localhost ]]
631	then
632	do_batch=true
633	do_remote=true
634	case $host in
635	(ibm\|ibms\|ibmy\|lctit\|nech\|neck\|unics) true;;
636	(*) printf "\n +++ no queueing system available on execution host \"$host\""
637	locat=nqs; exit;;
638	esac
639	else
640	host=$localhost
641	fi
642	fi
643
644	# VOM BENUTZER DEFINIERTE ENVIRONMENT VARIABLEN MUESSEN PRINZIPIELL
645	# EXPORTIERT WERDEN, DA SIE VIELLEICHT IN WEITER UNTEN AUFZURUFEN-
646	# DEN PROGRAMMEN BENOETIGT WERDEN
647	export $var
648	fi
649
650
651
652
653	elif [[ "$(echo $zeile \| cut -c1-3)" = "EC:" ]]
654	then
655
656	# ZEILE DEFINIERT ERROR-KOMMANDO
657	(( iec = iec + 1 ))
658	zeile=$(echo $zeile \| cut -c4-)
659	err_command[$iec]="$zeile"
660
661	elif [[ "$(echo $zeile \| cut -c1-3)" = "IC:" ]]
662	then
663
664	# ZEILE DEFINIERT INPUT-KOMMANDO
665	(( iic = iic + 1 ))
666	zeile=$(echo $zeile \| cut -c4-)
667	in_command[$iic]="$zeile"
668
669	elif [[ "$(echo $zeile \| cut -c1-3)" = "OC:" ]]
670	then
671
672	# ZEILE DEFINIERT OUTPUT-KOMMANDO
673	(( ioc = ioc + 1 ))
674	zeile=$(echo $zeile \| cut -c4-)
675	out_command[$ioc]="$zeile"
676
677	else
678
679	# ZEILE DEFINIERT DATEIVERBINDUNG. EINLESEN DER DATEIEIGENSCHAFTEN
680	# s2a: in/out - Feld
681	# s2b: loc - Feld (optional)
682	# s2c: tr/ar - Feld (optional)
683	echo $zeile \| cut -d" " -f1-2 \| read s1 s2
684	# s1=`echo $zeile \| cut -d" " -f1`
685	# s2=`echo $zeile \| cut -d" " -s -f2`
686	s2a=$(echo $s2 \| cut -d":" -f1)
687	if [[ $(echo $s2 \| grep -c ":") = 0 ]]
688	then
689	s2b=""
690	s2c=""
691	else
692	echo $s2 \| cut -d":" -f2-3 \| sed 's/:/ /g' \| read s2b s2c
693	# s2b=`echo $s2 \| cut -d":" -f2 \| sed 's/:/ /g'`
694	# s2c=`echo $s2 \| cut -d":" -s -f3 \| sed 's/:/ /g'`
695	fi
696	echo $zeile \| cut -d" " -f3-6 \| read s3 s4 s5 s6
697	# s3=`echo $zeile \| cut -d" " -f3`
698	# s4=`echo $zeile \| cut -d" " -s -f4`
699	# s5=`echo $zeile \| cut -d" " -s -f5`
700	# s6=`echo $zeile \| cut -d" " -s -f6`
701
702
703	# ABSPEICHERN DER DATEIVERBINDUNG, FALLS IN INPUT- ODER OUTPUT-LIST
704	# VERMERKT. VARIABLE S3 KANN AUCH LISTE ENTHALTEN (FELDTRENNER ":")
705	# DATEIVERBINDUNG WIRD DANN NICHT ABGESPEICHERT UND GEPRUEFT, WENN
706	# PROGRAMMLAUF AUF REMOTE-MASCHINE ERFOLGT UND DATEI NUR LOKAL VOR-
707	# HANDEN SEIN MUSS (D.H. s2b = loc)
708	IFSALT="$IFS"; IFS="$IFS:"
709	if [[ "$s2a" = in && ! ( $do_remote = true && ( "$s2b" = loc \|\| "$s2b" = locopt ) ) ]]
710	then
711	found=false
712	for actual in $input_list
713	do
714	for formal in $s3
715	do
716	[[ $actual = $formal \|\| "$formal" = "-" ]] && found=true
717	done
718	done
719	if [[ $found = true ]]
720	then
721	(( iin = iin + 1 ))
722	localin[$iin]=$s1; transin[$iin]=$s2b; actionin[$iin]=$s2c;
723	typein[$iin]=$s3; pathin[$iin]=$s4; endin[$iin]=$s5;
724	extin[$iin]=$s6
725	fi
726	elif [[ "$s2a" = out && ! ( $do_remote = true && "$s2b" = loc ) ]]
727	then
728	found=false
729	for actual in $output_list
730	do
731	for formal in $s3
732	do
733	[[ $actual = $formal \|\| "$formal" = "-" ]] && found=true
734	done
735	done
736	if [[ $found = true ]]
737	then
738	(( iout = iout + 1 ))
739	localout[$iout]=$s1; actionout[$iout]=$s2c; typeout[$iout]=$s3;
740	pathout[$iout]=$s4; endout[$iout]=$s5; extout[$iout]=$s6
741	fi
742	elif [[ "$s2a" != in && "$s2a" != out ]]
743	then
744	printf "\n +++ I/O-attribute in configuration file $config_file has the invalid"
745	printf "\n value \"$s2\". Only \"in\" and \"out\" are allowed!"
746	locat=connect; exit
747	fi
748	IFS="$IFSALT"
749	fi
750	done < $config_file
751
752	else
753
754
755	# INTERPRETATION DER KONFIGURATIONSDATEI MITTELS FORTRAN 90 - PROGRAMM
756	[[ $silent = false ]] && printf "..."
757	export cond1 cond2 config_file do_remote do_trace input_list localhost output_list
758	export interpreted_config_file=.icf.$RANDOM
759
760	# case $localhost_realname in
761	# (caurus\|twister) interpret_config.hp;;
762	# (bora\|breva\|elephanta\|gallego\|gregale\|hababai\|maestro\|orkan\|ostria) export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/muksoft/packages/intel_ifc/8.1/lib/; interpret_config_9.x;;
763	# (levanto\|vorias) export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/muksoft/packages/intel/ifort/9.1.037/lib/; interpret_config_9.x_levanto;;
764	# (quanero) export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/opt/intel_fc_80/lib; interpret_config_9.x;;
765	# (*) interpret_config.x;;
766	# esac
767
768	if [[ $localhost_realname = "gate" ]]
769	then
770	interpret_config_gate.x
771	else
772	interpret_config.x
773	fi
774
775	# AUSFUEHRUNG DER GENERIERTEN SHELL-KOMMANDOS IN DIESER SHELL
776	chmod u+x $interpreted_config_file
777	export PATH=$PATH:.
778	. $interpreted_config_file
779	rm $interpreted_config_file
780
781	fi
782
783
784	# QUELLTEXTVERZEICHNIS AUF LOKALER MASCHINE AUS KONFIGURATIONSDATEI
785	# BESTIMMEN (WUERDE SONST EVTL. DAS VERZEICHNIS DES JEWEILS UNTER -h
786	# ANGEGEBENEN REMOTE-RECHNERS SEIN)
787	# BEI BATCH-JOBS SIND DIE ZU UEBERSETZENDEN PROGRAMMTEILE SCHON KOMPLETT
788	if [[ "$SOURCES_COMPLETE" = "" ]]
789	then
790
791	# ZUERST PRUEFEN, OB EIN GLOBALER QUELLTEXTPFAD FUER ALLE RECHNER
792	# VEREINBART WURDE
793	source_path=""
794	line=""
795	grep "%source_path" $config_file > tmp_mrun
796	while read line
797	do
798	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
799	then
800	if [[ "$(echo $line \| cut -d" " -f3)" = "" ]]
801	then
802	global_source_path=`echo $line \| cut -d" " -f2`
803	fi
804	fi
805	done < tmp_mrun
806
807	line=""
808	found=false
809	grep " $localhost" $config_file \| grep "%source_path" > tmp_mrun
810	while read line
811	do
812	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
813	then
814	if [[ $found = true ]]
815	then
816	printf "\n\n +++ more than one source path found in configuration file"
817	printf "\n for local host \"$localhost\" "
818	locat=source_path; exit
819	fi
820	source_path=`echo $line \| cut -d" " -f2`
821	found=true
822	fi
823	done < tmp_mrun
824	rm tmp_mrun
825
826	if [[ "$source_path" = "" ]]
827	then
828	if [[ "$global_source_path" != "" ]]
829	then
830	source_path=$global_source_path
831	else
832	printf "\n\n +++ no source path found in configuration file"
833	printf "\n for local host \"$localhost\" "
834	locat=source_path; exit
835	fi
836	fi
837	eval source_path=$source_path
838
839	if [[ ! -d $source_path ]]
840	then
841	printf "\n\n +++ source path \"$source_path\" on local host"
842	printf "\n \"$localhost\" does not exist"
843	locat=source_path; exit
844	fi
845
846	fi
847
848
849
850	# NOCHMAL PRUEFEN, OB AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL
851	# (HOST KANN IN KONFIGURATIONSDATEI ANDERS FESTGELEGT WORDEN SEIN)
852	# WERT VON do_remote WIRD FUER DATEIVERBINDUNGEN BENOETIGT.
853	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
854	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
855	if [[ -n $host && "$host" != $localhost ]]
856	then
857	do_batch=true
858	do_remote=true
859	case $host in
860	(ibm\|ibmb\|ibmh\|ibms\|ibmy\|lctit\|nech\|neck\|unics) true;;
861	(*) printf "\n"
862	printf "\n +++ execution host \"$host\" not admitted for MRUN,"
863	printf "\n or no queueing system available on execution host!"
864	locat=nqs; (( iec = 0 )); exit;;
865	esac
866	else
867	host=$localhost
868	fi
869
870
871	# PRUEFUNG EINIGER PROZESSORZAHLANGABEN BEI RECHNUNGEN AUF PARALLELRECHNERN
872	if [[ "$cond1" = parallel \|\| "$cond2" = parallel ]]
873	then
874
875	# PRUEFEN, OB DIE ANZAHL DER ZU VERWENDENDEN PES ANGEGEBEN WURDE
876	if [[ ! -n $numprocs ]]
877	then
878	printf "\n"
879	printf "\n +++ option \"-K parallel\" requires additional specification"
880	printf "\n of the number of processors to be used by"
881	printf "\n mrun-option \"-X\" or by environment-variable"
882	printf "\n \"numprocs\" in the configuration file"
883	locat=numprocs; (( iec = 0 )); exit
884	fi
885
886	# PRUEFEN, OB DIE PROZESSORANZAHL PRO KNOTEN ANGEGEBEN WURDE (GGF.
887	# DEFAULT-WERT SETZEN) UND OB SIE EIN GANZZAHLIGER TEILER DER
888	# GESAMTPROZESSORANZAHL IST
889	if [[ $host = nech \|\| $host = neck \|\| $host = ibmh \|\| $host = ibmb \|\| $host = ibms ]]
890	then
891	[[ "$tasks_per_node" = "" ]] && tasks_per_node=6
892	(( ival = $tasks_per_node ))
893	(( pes = numprocs ))
894	# if [[ $(echo $package_list \| grep -c dvrp_graphics+1PE) = 1 ]]
895	# then
896	# (( pes = pes - 1 ))
897	# fi
898	(( ii = pes / ival ))
899	if (( pes - ii * ival > 0 ))
900	then
901	printf "\n"
902	printf "\n +++ tasks per node (option \"-T\") must be an integral"
903	printf "\n divisor of the total number of processors (option \"-X\")"
904	printf "\n values of this mrun-call: \"-T $tasks_per_node\" \"-X $numprocs\""
905	locat=tasks_per_node; (( iec = 0 )); exit
906	fi
907	fi
908
909	# IBMY HAT NUR EINEN KNOTEN
910	if [[ $host = ibmy ]]
911	then
912	if [[ "$tasks_per_node" != "" && "$tasks_per_node" != "$numprocs" ]]
913	then
914	printf "\n"
915	printf "\n +++ on ibmy, tasks per node (option \"-T\") must be equal to the"
916	printf "\n total number of processors (option \"-X\")"
917	printf "\n values of this mrun-call: \"-T $tasks_per_node\" \"-X $numprocs\""
918	locat=tasks_per_node; (( iec = 0 )); exit
919	fi
920	fi
921
922	# FALLS OPENMP PARALLELISIERUNG VERWENDET WERDEN SOLL, ANZAHL VON THREADS
923	# SETZEN UND ZAHL DER TASKS PRO KNOTEN AUF 1 SETZEN
924	if [[ $use_openmp = true ]]
925	then
926	threads_per_task=$tasks_per_node
927	tasks_per_node=1
928	fi
929	OOPT="-O $threads_per_task"
930	TOPT="-T $tasks_per_node"
931
932	# GESAMTZAHL DER KNOTEN BESTIMMEN
933	if [[ "$tasks_per_node" != "" ]]
934	then
935	(( nodes = numprocs / ( tasks_per_node * threads_per_task ) ))
936	fi
937
938	# PRUEFEN, OB NODE USAGE EINEN ERLAUBTEN WERT HAT BZW. DEN DEFAULT
939	# SETZEN
940	if [[ $node_usage = default ]]
941	then
942	if [[ $host = ibms ]]
943	then
944	node_usage=shared
945	else
946	node_usage=not_shared
947	fi
948	fi
949	if [[ $node_usage != shared && $node_usage != not_shared ]]
950	then
951	printf "\n"
952	printf "\n +++ node usage (option \"-n\") is only allowed to be set"
953	printf "\n \"shared\" or \"not_shared\""
954	locat=tasks_per_node; (( iec = 0 )); exit
955	fi
956
957	fi
958
959	# PRUEFEN, OB HOSTFILE EXISTIERT
960	if [[ -n $hostfile ]]
961	then
962	if [[ ! -f $hostfile ]]
963	then
964	printf "\n"
965	printf "\n +++ hostfile \"$hostfile\" does not exist"
966	locat=hostfile; exit
967	fi
968	fi
969
970	# PRUEFEN, OB RHOSTS DATEI EXISTIERT. GEGEBENENFALLS ANLEGEN BZW. ERWEITERN
971	if [[ $host = ibmy && $do_remote = false ]]
972	then
973	if [[ ! -f $HOME/.rhosts ]]
974	then
975	echo "gfdl5.yonsei.ac.kr" > $HOME/.rhosts
976	printf "\n\n *** file:"
977	printf "\n $HOME/.rhosts"
978	printf "\n was created\n"
979	fi
980	if [[ $(grep -c gfdl5.yonsei.ac.kr $HOME/.rhosts) = 0 ]]
981	then
982	echo "gfdl5.yonsei.ac.kr" >> $HOME/.rhosts
983	printf "\n\n *** file:"
984	printf "\n $HOME/.rhosts"
985	printf "\n was extended by the name of the current host\n"
986	fi
987	fi
988
989	# DEFAULT-DATEITRANSFER-PROTOKOLL FESTLEGEN
990	if [[ "$filetransfer_protocol" = "" ]]
991	then
992	case $host in
993	(nech\|neck\|ibm\|ibmb\|ibmh\|ibms\|ibmy\|lctit) filetransfer_protocol=scp;;
994	(*) filetransfer_protocol=ftp;;
995	esac
996	fi
997
998	# PRUEFEN, OB ZULAESSIGES DATEITRANSFER-PROTOKOLL GEWAEHLT WURDE
999	if [[ "$filetransfer_protocol" != ftp && "$filetransfer_protocol" != scp ]]
1000	then
1001	printf "\n"
1002	printf "\n +++ illegal value \"$filetransfer_protocol\" for Option -f"
1003	printf "\n only \"ftp\" or \"scp\" are allowed"
1004	locat=options; exit
1005	fi
1006
1007
1008	# FALLS NICHT VORGEGEBEN, DEFAULT-QUEUE AUF DER ZIELMASCHINE FESTLEGEN
1009	if [[ $queue = none ]]
1010	then
1011	case $host in
1012	(ibmb) if [[ $node_usage = shared ]]
1013	then
1014	queue=cshare
1015	else
1016	queue=csolo
1017	fi;;
1018	(ibmh) if [[ $node_usage = shared ]]
1019	then
1020	queue=cshare
1021	else
1022	queue=csolo
1023	fi;;
1024	(ibmy) queue=parallel;;
1025	(lctit) queue=default;;
1026	(nech) queue=none;;
1027	(neck) queue=P;;
1028	(unics) queue=unics;;
1029	esac
1030	fi
1031
1032
1033	# EVTL. NETCDF-UNTERSTUETZUNG SETZEN
1034	case $host in
1035	(decalpha) netcdf_support=true
1036	netcdf_path=/usr/local/netcdf-3.5.1;;
1037	(ibmb\|ibmh) netcdf_support=true
1038	netcdf_path=/aws/dataformats/netcdf-3.6.0-p1/64-32;;
1039	(ibms) netcdf_support=true
1040	netcdf_path=/applic/lib/NETCDF64;;
1041	(ibmy) netcdf_support=true
1042	netcdf_path=/usr1/users/raasch/pub/netcdf-3.6.0-p1;;
1043	(lcmuk) netcdf_support=true
1044	if [[ $scirocco = true ]]
1045	then
1046	netcdf_path=/opt/netcdf/3.6.2-beta4
1047	else
1048	netcdf_path=/muksoft/packages/netcdf/linux
1049	fi;;
1050	(lctit) netcdf_support=true
1051	netcdf_path=/home2/usr5/mkanda/netcdf-3.6.1;;
1052	(nech) netcdf_support=true
1053	netcdf_path=/pool/SX-6/netcdf/netcdf-3.6.0-p1;;
1054	(neck) netcdf_support=true
1055	netcdf_path=/home/DSRC/NC/tatuyama/pub/netcdf-3.6.0-p1;;
1056	esac
1057
1058
1059	# VOLLSTAENDIGE DATEINAMEN DER INPUT-FILES BILDEN,
1060	# INPUT-DATEIEN AUF VORHANDENSEIN PRUEFEN UND EVTL. HOECHSTE ZYKLUSNUMMER
1061	# ERMITTELN
1062	(( i = 0 ))
1063	while (( i < iin ))
1064	do
1065	(( i = i + 1 ))
1066	(( maxcycle = 0 ))
1067
1068	# NAMENSBILDUNG (EVTL. IST FESTER DATEINAME VORGEGEBEN)
1069	if [[ "${actionin[$i]}" = di ]]
1070	then
1071	remotepathin[$i]=${pathin[$i]}/${endin[$i]} # REMOTE-PFAD ERST AUF
1072	# REM-MASCHINE AUSWERTEN
1073	eval filename=${pathin[$i]}/${endin[$i]}
1074	else
1075	remotepathin[$i]=${pathin[$i]}/${afname}${endin[$i]} # REMOTE-PFAD ERST AUF
1076	# REM-MASCHINE AUSWERTEN
1077	eval filename=${pathin[$i]}/${afname}${endin[$i]}
1078	fi
1079
1080	# PRUEFEN AUF VORHANDENSEIN
1081	if [[ $(ls $filename* 2>&1 \| grep -c "not found") = 1 \|\| \
1082	$(ls $filename* 2>&1 \| grep -c "No such file") = 1 \|\| \
1083	$(ls $filename* 2>&1 \| grep -c "does not exist") = 1 ]]
1084	then
1085	# DATEIEN MIT EXTENSION (Z.B. NC) MUESSEN NICHT ZWINGEND VORHANDEN
1086	# SEIN, DESHALB IN SOLCHEN FAELLEN KEIN ABBRUCH. DIES IST NUR EINE
1087	# VORUEBERGEHENDE LOESUNG (OKT 05). NICHT ZWINGEND BENOETIGTE
1088	# EINGABEDATEIEN SOLLTEN EINE SPEZIELLE OPTION IN DER DATEI-
1089	# VERBINDUNGSANWEISUNG BEKOMMEN (Z.B. inopt?)
1090	if [[ "${transin[$i]}" != "locopt" ]]
1091	then
1092	printf "\n\n +++ INPUT-file: "
1093	if [[ "${extin[$i]}" = "" ]]
1094	then
1095	printf "\n $filename"
1096	else
1097	printf "\n $filename.${extin[$i]}"
1098	fi
1099	printf "\n does not exist\n"
1100	locat=input; exit
1101	else
1102	transin[$i]="unavailable"
1103	fi
1104	else
1105
1106	# ZYKLUSNUMMER FESTSTELLEN
1107	ls -1 -d $filename > filelist 2>/dev/null
1108	ls -1 -d $filename.* >> filelist 2>/dev/null
1109	while read zeile
1110	do
1111	cycle=$(print $zeile \| cut -f2 -d".")
1112	if [[ "$cycle" = "$zeile" ]]
1113	then
1114	(( icycle = 0 ))
1115	elif [[ "$cycle" = "${extin[$i]}" ]]
1116	then
1117	(( icycle = 0 ))
1118	else
1119	(( icycle = $cycle ))
1120	fi
1121	if (( icycle > maxcycle ))
1122	then
1123	(( maxcycle = icycle ))
1124	file_to_be_used=$zeile
1125	fi
1126	done <filelist
1127	rm filelist
1128
1129	# EVTL. ZYKLUSNUMMER AN DATEINAMEN ANFUEGEN
1130	if (( maxcycle > 0 ))
1131	then
1132	if [[ "${extin[$i]}" != " " && "${extin[$i]}" != "" ]]
1133	then
1134	filename=${filename}.$maxcycle.${extin[$i]}
1135	else
1136	filename=${filename}.$maxcycle
1137	fi
1138	else
1139	if [[ "${extin[$i]}" != " " && "${extin[$i]}" != "" ]]
1140	then
1141	filename=${filename}.${extin[$i]}
1142	fi
1143	fi
1144
1145	# DATEINAMEN OHNE PFAD ABER MIT ZYKLUSNUMMER ABSPEICHERN,
1146	# DA SPAETER BEI RUECKSPEICHERN VOM ARCHIVSYSTEM EVTL. BENOETIGT
1147	absnamein[$i]=$filename
1148	if (( maxcycle > 0 ))
1149	then
1150	if [[ "${actionin[$i]}" = di ]]
1151	then
1152	frelin[$i]=${endin[$i]}.$maxcycle
1153	else
1154	frelin[$i]=${afname}${endin[$i]}.$maxcycle
1155	fi
1156	else
1157	if [[ "${actionin[$i]}" = di ]]
1158	then
1159	frelin[$i]=${endin[$i]}
1160	else
1161	frelin[$i]=${afname}${endin[$i]}
1162	fi
1163	fi
1164
1165	fi
1166	done
1167
1168
1169	# VOLLSTAENDIGE DATEINAMEN (OHNE $ ODER ~) DER OUTPUT-FILES BILDEN,
1170	# OUTPUT-DATEIEN AUF VORHANDENSEIN PRUEFEN UND EVTL. HOECHSTE ZYKLUSNUMMER
1171	# ERMITTELN ODER, FALLS NICHT VORHANDEN, PRUEFEN, OB SIE SICH ANLEGEN LASSEN
1172	# DIESE AKTIONEN FINDEN NICHT STATT, WENN PROGRAMM AUF REMOTE-MASCHINE
1173	# RECHNET UND DATEI ANSCHLIESSEND TRANSFERIERT WERDEN SOLL!
1174	(( i = 0 ))
1175	while (( i < iout ))
1176	do
1177	(( i = i + 1 ))
1178	if [[ ! ( $fromhost != $localhost && ( "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = tra \|\| "${actionout[$i]}" = trpe ) ) ]]
1179	then
1180	if [[ "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = trpe ]]
1181	then
1182	actionout[$i]=""
1183	elif [[ "${actionout[$i]}" = tra ]]
1184	then
1185	actionout[$i]=a
1186	fi
1187	(( maxcycle = 0 ))
1188	eval filename=${pathout[$i]}/${fname}${endout[$i]}
1189	eval catalogname=${pathout[$i]}
1190	if [[ $(ls $filename* 2>&1 \| grep -c "not found") = 1 \|\| \
1191	$(ls $filename* 2>&1 \| grep -c "No such file") = 1 \|\| \
1192	$(ls $filename* 2>&1 \| grep -c "does not exist") = 1 ]]
1193	then
1194
1195	# OUTPUT-DATEI NICHT VORHANDEN. PRUEFEN, OB ANLEGEN MOEGLICH.
1196	if cat /dev/null > $filename
1197	then
1198	rm $filename
1199	else
1200
1201	# PRUEFEN, OB KATALOG VORHANDEN UND EVTL. DIESEN ANLEGEN
1202	if [[ ! -d $catalogname ]]
1203	then
1204	if mkdir -p $catalogname
1205	then
1206	printf "\n\n *** directory:"
1207	printf "\n $catalogname"
1208	printf "\n was created\n"
1209	else
1210	printf "\n\n +++ OUTPUT-file:"
1211	printf "\n $filename"
1212	printf "\n cannot be created, because directory does not exist"
1213	printf "\n and cannot be created either"
1214	printf "\n"
1215	locat=output ; exit
1216	fi 2>/dev/null
1217	else
1218	printf "\n\n +++ OUTPUT-file:"
1219	printf "\n $filename"
1220	printf "\n cannot be created, although directory exists"
1221	printf "\n"
1222	locat=output ; exit
1223	fi
1224	fi 2>/dev/null
1225	else
1226
1227	# ZYKLUSNUMMER FESTSTELLEN
1228	ls -1 -d $filename > filelist 2>/dev/null
1229	ls -1 -d $filename.* >> filelist 2>/dev/null
1230	while read zeile
1231	do
1232	cycle=$(print $zeile \| cut -f2 -d".")
1233	if [[ "$cycle" = "$zeile" \|\| "$cycle" = ${extout[$i]} ]]
1234	then
1235	(( icycle = 1 ))
1236	else
1237	(( icycle = $cycle + 1 ))
1238	fi
1239	if (( icycle > maxcycle ))
1240	then
1241	(( maxcycle = icycle ))
1242	fi
1243	done <filelist
1244	rm filelist
1245	fi
1246
1247	# EVTL. ZYKLUSNUMMER AN DATEINAMEN ANFUEGEN UND PRUEFEN, OB SICH
1248	# DATEI AUCH WIRKLICH ANLEGEN LAESST. IM APPEND-FALL MUSS AN DEN
1249	# HOECHSTEN VORHANDENEN ZYKLUS-ANGEHAENGT WERDEN. ANLAGEPRUEFUNG
1250	# IST DANN NATUERLICH NICHT ZULAESSIG BZW. MOEGLICH
1251	if [[ "${actionout[$i]}" != a ]]
1252	then
1253	if (( maxcycle > 0 ))
1254	then
1255	filename=${filename}.$maxcycle
1256	if cat /dev/null > $filename
1257	then
1258	rm $filename
1259	else
1260	printf "\n +++ OUTPUT-file:"
1261	printf "\n $filename"
1262	printf "\n cannot be created"
1263	locat=output ; exit
1264	fi
1265	fi
1266	else
1267	(( maxcycle = maxcycle - 1 ))
1268	if (( maxcycle > 0 ))
1269	then
1270	filename=${filename}.$maxcycle
1271	fi
1272	fi
1273
1274	# DATEINAMEN OHNE PFAD ABER MIT ZYKLUSNUMMER ABSPEICHERN,
1275	# DA SPAETER BEI ABLAGE AUF ARCHIVSYSTEM BZW. FUER
1276	# DATEI OUTPUT_FILE_CONNECTIONS EVTL. BENOETIGT
1277	pathout[$i]=$filename
1278	if (( maxcycle > 0 ))
1279	then
1280	frelout[$i]=${fname}${endout[$i]}.$maxcycle
1281	else
1282	frelout[$i]=${fname}${endout[$i]}
1283	fi
1284
1285	fi
1286	done
1287
1288
1289	# PRUEFEN, OB ENTWEDER HAUPTPROGRAMM ODER NUR EIN AUSFUEHRBARES
1290	# PROGRAMM VEREINBART WURDE (IN DIESEM FALL BRAUCHT IM WEITEREN NICHT
1291	# UEBERSETZT ZU WERDEN)
1292	if [[ "$mainprog" = "" && "$executable" = "" ]]
1293	then
1294	printf "\n +++ neither main program nor executable defined"
1295	locat=source; exit
1296	elif [[ "$mainprog" != "" && "$executable" != "" ]]
1297	then
1298	printf "\n +++ main program as well as executable defined"
1299	locat=source; exit
1300	elif [[ "$mainprog" = "" && "$executable" != "" ]]
1301	then
1302	do_compile=false
1303	fi
1304
1305
1306	# ALLE ZU UEBERSETZENDEN PROGRAMMTEILE ZUSAMMENSAMMELN
1307	# BEI BATCH-JOBS IST DIES NICHT NOETIG, WEIL DIE PROGRAMMTEILE BEREITS DURCH
1308	# DEN MRUN-AUFRUF ERMITTELT SIND, DER DEN BATCH-JOB GENERIERT HAT, UND
1309	# IM VERZEICHNIS SOURCES_FOR_RUN_... ABGELEGT SIND
1310	if [[ $do_compile = true && "$SOURCES_COMPLETE" = "" ]]
1311	then
1312
1313	[[ "$source_list" = LM ]] && source_list=LOCALLY_MODIFIED
1314	[[ "$source_list" = WP ]] && source_list=WRITE_PERMIT
1315
1316	if [[ $restart_run != true ]]
1317	then
1318	rm -rf SOURCES_FOR_RUN_$fname
1319	mkdir SOURCES_FOR_RUN_$fname
1320	fi
1321
1322
1323	# EVTL. ZU UEBERSETZENDE PROGRAMMTEILE DADURCH BESTIMMEN, DASS GEPRUEFT
1324	# WIRD, WELCHE DATEIEN WRITE-PERMIT BESITZEN (DATEIEN SOLLTEN DESHALB
1325	# UNTER RCS-KONTROLLE STEHEN). MIT DER VARIABLEN EXCLUDE KOENNEN
1326	# BESTIMMTE DATEIEN GRUNDSAETZLICH VON DER UEBERSETZUNG AUSGESCHLOSSEN
1327	# WERDEN. DIES IST NUR BEI MANUELLEM START VON MRUN DURCH DEN BENUTZER
1328	# MOEGLICH, DA BEI AUTOMATISCHEN RESTARTS TEST DURCH DIE TATSAECHLICH
1329	# ZU UBERSETZENDEN DATEIEN ERSETZT IST.
1330	# ALLE ERMITTELTEN DATEIEN WERDEN IM VERZEICHNIS SOURCES_FOR_RUN_...
1331	# GESAMMELT
1332	if [[ "$source_list" = WRITE_PERMIT ]]
1333	then
1334
1335	source_list=""
1336	cd $source_path
1337
1338
1339	# ALLE MOEGLICHEN QUELLCODEDATEIEN AUFLISTEN
1340	Names=$(ls -1 *.f90 2>&1)
1341	[[ $(echo $Names \| grep -c '*.f90') = 0 ]] && Filenames="$Names"
1342	Names=$(ls -1 *.F90 2>&1)
1343	[[ $(echo $Names \| grep -c '*.F90') = 0 ]] && Filenames="$Filenames $Names"
1344	Names=$(ls -1 *.F 2>&1)
1345	[[ $(echo $Names \| grep -c '*.F') = 0 ]] && Filenames="$Filenames $Names"
1346	Names=$(ls -1 *.f 2>&1)
1347	[[ $(echo $Names \| grep -c '*.f') = 0 ]] && Filenames="$Filenames $Names"
1348	Names=$(ls -1 *.c 2>&1)
1349	[[ $(echo $Names \| grep -c '*.c') = 0 ]] && Filenames="$Filenames $Names"
1350
1351
1352	# DATEIEN MIT WRITE-PERMIT NACH SOURCES_FOR_RUN_... KOPIEREN
1353	for dateiname in $Filenames
1354	do
1355	if [[ -w $dateiname ]]
1356	then
1357	if [[ "$exclude" = "" \|\| $(echo $exclude \| grep -c $dateiname) = 0 ]]
1358	then
1359	cp $dateiname $working_directory/SOURCES_FOR_RUN_$fname
1360	source_list=$source_list"$dateiname "
1361	fi
1362	fi
1363	done
1364
1365	cd - > /dev/null
1366
1367
1368	elif [[ "$source_list" = LOCALLY_MODIFIED ]]
1369	then
1370
1371	# MODIFIZIERTE DATEIEN DER SVN-ARBEITSKOPIE BESTIMMEN
1372	source_list=""
1373	cd $source_path
1374
1375
1376	# PRUEFEN, OB VERZEICHNIS UEBERHAUPT UNTER SVN-KONTROLLE STEHT
1377	if [[ ! -d .svn ]]
1378	then
1379	printf "\n\n +++ source directory"
1380	printf "\n \"$source_path\" "
1381	printf "\n is not under control of \"subversion\"."
1382	printf "\n Please do not use mrun-option \"-s LOCALLY MODIFIED\"\n"
1383	fi
1384
1385
1386	# ALLE MODIFIZIERTEN QUELLCODEDATEIEN AUFLISTEN
1387	Filenames=""
1388	svn status \| while read line
1389	do
1390	firstc=`echo $line \| cut -c1`
1391	if [[ $firstc = M \|\| $firstc = "?" ]]
1392	then
1393	Name=`echo "$line" \| cut -c8-`
1394	extension=`echo $Name \| cut -d. -f2`
1395	if [[ "$extension" = f90 \|\| "$extension" = F90 \|\| "$extension" = f \|\| "$extension" = F \|\| "$extension" = c ]]
1396	then
1397	Filenames="$Filenames "$Name
1398	fi
1399	fi
1400	done
1401
1402
1403	# DATEIEN NACH SOURCES_FOR_RUN_... KOPIEREN
1404	for dateiname in $Filenames
1405	do
1406	cp $dateiname $working_directory/SOURCES_FOR_RUN_$fname
1407	source_list=$source_list"$dateiname "
1408	done
1409
1410	cd - > /dev/null
1411
1412
1413	# MITTELS OPTION -s ANGEGEBENE DATEIEN NACH SOURCES_FOR_RUN_... KOPIEREN
1414	# BEI AUTOMATISCHEN FORTSETZUNGSLAEUFEN SIND DORT SCHON ALLE DATEIEN
1415	# VORHANDEN
1416	elif [[ "$source_list" != "" && $restart_run != true ]]
1417	then
1418
1419	cd $source_path
1420
1421	for filename in $source_list
1422	do
1423
1424	# QUELLTEXT-DATEI DARF KEINE PFADE BEINHALTEN
1425	if [[ $(print $filename \| grep -c "/") != 0 ]]
1426	then
1427	printf "\n +++ source code file: $filename"
1428	printf "\n must not contain (\"/\") "
1429	locat=source; exit
1430	fi
1431
1432	if [[ ! -f $filename ]]
1433	then
1434	printf "\n +++ source code file: $filename"
1435	printf "\n does not exist"
1436	locat=source; exit
1437	else
1438	cp $filename $working_directory/SOURCES_FOR_RUN_$fname
1439	fi
1440
1441	done
1442
1443	cd - > /dev/null
1444
1445	fi
1446
1447
1448	# PRUEFEN, OB ENTWEDER HAUPTPROGRAMM VORHANDEN UND ES EVTL. IN DER
1449	# LISTE DER ZU UEBERSETZENDEN PROGRAMMTEILE MIT ENTHALTEN IST (WENN
1450	# NICHT, WIRD ES DIESER LISTE HINZUGEFUEGT)
1451	if [[ $restart_run != true ]]
1452	then
1453
1454	if [[ ! -f "$source_path/$mainprog" ]]
1455	then
1456	printf "\n\n +++ main program: $mainprog"
1457	printf "\n does not exist in source directory"
1458	printf "\n \"$source_path\"\n"
1459	locat=source; exit
1460	else
1461	if [[ $(echo $source_list \| grep -c $mainprog) = 0 ]]
1462	then
1463	cp $source_path/$mainprog SOURCES_FOR_RUN_$fname
1464	source_list=${mainprog}" $source_list"
1465	fi
1466	fi
1467	fi
1468
1469
1470	# DATEIEN AUS ZUSAETZLICHEM QUELLVERZEICHNIS HINZUFUEGEN
1471	if [[ $restart_run != true && "$add_source_path" != "" ]]
1472	then
1473
1474	# GIBT ES DAS VERZEICHNIS UEBERHAUPT?
1475	if [[ ! -d $add_source_path ]]
1476	then
1477	printf "\n\n +++ WARNING: additional source code directory"
1478	printf "\n \"$add_source_path\" "
1479	printf "\n does not exist or is not a directory."
1480	printf "\n No source code will be used from this directory!\n"
1481	add_source_path=""
1482	sleep 3
1483	else
1484
1485	cd $add_source_path
1486
1487	Names=$(ls -1 *.f90 2>&1)
1488	[[ $(echo $Names \| grep -c '*.f90') = 0 ]] && AddFilenames="$Names"
1489	Names=$(ls -1 *.F90 2>&1)
1490	[[ $(echo $Names \| grep -c '*.F90') = 0 ]] && AddFilenames="$AddFilenames $Names"
1491	Names=$(ls -1 *.F 2>&1)
1492	[[ $(echo $Names \| grep -c '*.F') = 0 ]] && AddFilenames="$AddFilenames $Names"
1493	Names=$(ls -1 *.f 2>&1)
1494	[[ $(echo $Names \| grep -c '*.f') = 0 ]] && AddFilenames="$AddFilenames $Names"
1495	Names=$(ls -1 *.c 2>&1)
1496	[[ $(echo $Names \| grep -c '*.c') = 0 ]] && AddFilenames="$AddFilenames $Names"
1497
1498	cd - > /dev/null
1499	cd SOURCES_FOR_RUN_$fname
1500
1501	for dateiname in $AddFilenames
1502	do
1503	if [[ -f $dateiname ]]
1504	then
1505	printf "\n +++ source code file \"$dateiname\" found in additional"
1506	printf "\n source code directory \"$add_source_path\" "
1507	printf "\n as well as in directory \"$source_path\"."
1508	locat=source; exit
1509	fi
1510
1511	cp $add_source_path/$dateiname .
1512	source_list="$source_list $dateiname"
1513
1514	# Default User-Interface von der Liste entfernen, falls Datei
1515	# ein User-Interface enthaelt
1516	if [[ $( cat $dateiname \| grep -c "END SUBROUTINE user_parin" ) != 0 ]]
1517	then
1518	if [[ $dateiname != user_interface.f90 && -f user_interface.f90 ]]
1519	then
1520	rm -rf user_interface.f90
1521	source_list=`echo $source_list \| sed -e 's/user_interface.f90//'`
1522	printf "\n\n *** default \"user_interface.f90\" removed from the files to be translated"
1523	printf "\n since a user-interface is found in file"
1524	printf "\n \"$add_source_path/$dateiname\" \n"
1525	sleep 3
1526	else
1527	printf "\n\n *** user-interface file \"$dateiname\" "
1528	printf "\n added to the files to be translated \n"
1529	sleep 3
1530	fi
1531	fi
1532	done
1533
1534	cd - > /dev/null
1535	fi
1536	fi
1537
1538
1539	# ALLE UNTERPROGRAMME, DIE ZU VEREINBARTEN SOFTWAREPAKETEN GEHOEREN,
1540	# DER LISTE DER ZU UEBERSETZENDEN DATEIEN HINZUFUEGEN
1541	if [[ $restart_run != true && -n $package_list ]]
1542	then
1543
1544	cd $source_path
1545
1546	for package in $package_list
1547	do
1548
1549	[[ $package = "dvrp_graphics+1PE" ]] && package=dvrp_graphics
1550
1551	# ERMITTELE ALLE DATEIEN, DIE ZUM PAKET GEHOEREN
1552	# FEHLERMELDUNGEN WERDEN ABGEFANGEN, DA * AUCH VERZEICHNISSNAMEN
1553	# LIEFERT
1554	package_source_list=`grep "defined( __$package " * 2>/dev/null \| cut -f1 -d:`
1555
1556
1557	# FUEGE DIESE DATEIEN DER LISTE DER ZU UEBERSETZENDEN DATEIEN
1558	# HINZU, FALLS SIE NOCH NICHT DAZUGEHOEREN
1559	for source_list_name in $package_source_list
1560	do
1561	if [[ $(echo $source_list \| grep -c $source_list_name) = 0 ]]
1562	then
1563
1564	# NUR DATEIEN MIT GUELTIGEN ENDUNGEN VERWENDEN
1565	ending=`echo $source_list_name \| cut -f2 -d.`
1566	if [[ "$ending" = f90 \|\| "$ending" = F90 \|\| "$ending" = f \|\| "$ending" = F \|\| "$ending" = c ]]
1567	then
1568	cp $source_list_name $working_directory/SOURCES_FOR_RUN_$fname
1569	source_list="$source_list $source_list_name"
1570	fi
1571	fi
1572	done
1573	done
1574
1575	cd - > /dev/null
1576	fi
1577
1578
1579	# MAKEFILE AUF VORHANDENSEIN PRUEFEN UND KOPIEREN
1580	# BEI RESTART-LAEUFEN LIEGT ES SCHON IM VERZEICHNIS SOURCES_FOR_RUN...
1581	if [[ "$use_makefile" = true && "$restart_run" != true ]]
1582	then
1583	[[ "$makefile" = "" ]] && makefile=$source_path/Makefile
1584	if [[ ! -f $makefile ]]
1585	then
1586	printf "\n +++ file \"$makefile\" does not exist"
1587	printf "\n provide this file or set \"use_makefile=false\" in configuration file\n"
1588	locat=make; exit
1589	else
1590	cp $makefile SOURCES_FOR_RUN_$fname/Makefile
1591	fi
1592	fi
1593
1594	fi # do_compile=true
1595
1596
1597	# FALLS PROGRAMMTEILE UEBERSETZT WERDEN SOLLEN, FOLGEN JETZT EINIGE
1598	# UEBERPRUEFUNGEN UND DAS SETZEN DER PRAEPROZESSOR-DIREKTIVEN
1599	if [[ $do_compile = true ]]
1600	then
1601
1602	# PRAEPROZESSOR-DIREKTIVEN ZUM SELEKTIVEN AUSWAEHLEN VON CODETEILEN
1603	# ZUSAMMENSETZEN
1604	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1605	then
1606	PPOPTS=-Dibm=ibm
1607	elif [[ $(echo $localhost \| cut -c1-3) = nec ]]
1608	then
1609	PPOPTS=-Dnec
1610	else
1611	PPOPTS=-D$localhost
1612	fi
1613	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1614	then
1615	[[ -n $cond1 ]] && PPOPTS="$PPOPTS -D$cond1=$cond1"
1616	[[ -n $cond2 ]] && PPOPTS="$PPOPTS -D$cond2=$cond2"
1617	if [[ $netcdf_support = true ]]
1618	then
1619	PPOPTS="$PPOPTS -Dnetcdf=netcdf"
1620	[[ $localhost != ibms ]] && PPOPTS="$PPOPTS -Dnetcdf_64bit=netcdf_64bit"
1621	fi
1622	if [[ $localhost = ibmy ]]
1623	then
1624	PPOPTS="$PPOPTS -Dibmy_special=ibmy_special"
1625	fi
1626	else
1627	[[ -n $cond1 ]] && PPOPTS="$PPOPTS -D$cond1"
1628	[[ -n $cond2 ]] && PPOPTS="$PPOPTS -D$cond2"
1629	if [[ $netcdf_support = true ]]
1630	then
1631	PPOPTS="$PPOPTS -Dnetcdf"
1632	[[ $localhost != decalpha && $localhost != lctit ]] && PPOPTS="$PPOPTS -Dnetcdf_64bit"
1633	fi
1634	fi
1635	if [[ -n $package_list ]]
1636	then
1637	for package in $package_list
1638	do
1639	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1640	then
1641	if [[ $package != "dvrp_graphics+1PE" ]]
1642	then
1643	PPOPTS="$PPOPTS -D$package=$package"
1644	else
1645	PPOPTS="$PPOPTS -Ddvrp_graphics"
1646	export use_seperate_pe_for_dvrp_output=true
1647	fi
1648	else
1649	if [[ $package != "dvrp_graphics+1PE" ]]
1650	then
1651	PPOPTS="$PPOPTS -D$package"
1652	else
1653	PPOPTS="$PPOPTS -Ddvrp_graphics"
1654	export use_seperate_pe_for_dvrp_output=true
1655	fi
1656	fi
1657	done
1658	fi
1659	if [[ -n $cpp_opts ]]
1660	then
1661	for popts in $cpp_opts
1662	do
1663	PPOPTS="$PPOPTS -D$popts"
1664	done
1665	fi
1666
1667	# -D ARGUMENTEN EINEN DOPPELTEN UNTERSTRICH VORANSTELLEN
1668	PPOPTS=`echo " $PPOPTS" \| sed 's/ -D/ -D__/g'`
1669
1670	# OPTION ZUM EINSCHALTEN DES PRAEPROZESSORS HINZUFUEGEN
1671	if [[ $host = decalpha ]]
1672	then
1673	C_PPOPTS="-cpp -DMPI_REAL=MPI_DOUBLE_PRECISION -DMPI_2REAL=MPI_2DOUBLE_PRECISION $PPOPTS"
1674	elif [[ $(echo $host \| cut -c1-3) = ibm ]]
1675	then
1676	# blanks in PPOPTS muessen durch "," ersetzt werden
1677	PPOPTS=`echo $PPOPTS \| sed 's/ -/,-/g'`
1678	C_PPOPTS="-qsuffix=cpp=f90 -WF,-DMPI_REAL=MPI_DOUBLE_PRECISION,$PPOPTS"
1679	elif [[ $host = lcmuk ]]
1680	then
1681	C_PPOPTS="$PPOPTS -DMPI_REAL=MPI_DOUBLE_PRECISION -DMPI_2REAL=MPI_2DOUBLE_PRECISION"
1682	elif [[ $host = lctit ]]
1683	then
1684	C_PPOPTS="$PPOPTS -Mpreprocess -DMPI_REAL=MPI_DOUBLE_PRECISION -DMPI_2REAL=MPI_2DOUBLE_PRECISION"
1685	elif [[ $(echo $host \| cut -c1-3) = nec ]]
1686	then
1687	C_PPOPTS="-Ep -DMPI_REAL=MPI_REAL8 -DMPI_2REAL=MPI_2REAL8 -DSCFFT=dzfft -DCSFFT=zdfft $PPOPTS"
1688	else
1689	C_PPOPTS="$PPOPTS"
1690	fi
1691
1692	else
1693
1694
1695	# BEI LOKALEN RECHNUNGEN PRUEFEN, OB EXECUTABLE VORHANDEN
1696	if [[ $do_remote = false ]]
1697	then
1698	if [[ ! -f $executable ]]
1699	then
1700	printf "\n +++ executable file: $executable"
1701	printf "\n does not exist"
1702	locat=executable; exit
1703	fi
1704	fi
1705	fi
1706
1707
1708	# JOBMODUS FESTSTELLEN
1709	if [[ "$ENVIRONMENT" = BATCH && $localhost != lctit \|\| "$QUEUE" != interactive && $localhost = lctit ]]
1710	then
1711	jobmo=BATCH
1712	else
1713	jobmo=INTERACTIVE
1714	fi
1715
1716
1717	# HOSTSPEZIFISCHE DEFAULT-COMPILER SETZEN, FALLS NICHT BEREITS
1718	# DURCH BENUTZER ANDERWEITIG VEREINBART
1719	if [[ "$compiler_name" = "" ]]
1720	then
1721	case $localhost in
1722	(unics) compiler_name=f77;;
1723	(lcmuk) if [[ "$cond1" = parallel \|\| "$cond2" = parallel ]]
1724	then
1725	compiler_name=mpif90
1726	else
1727	compiler_name=ifc
1728	fi;;
1729	(lctit) if [[ "$cond1" = parallel \|\| "$cond2" = parallel ]]
1730	then
1731	compiler_name=mpif90
1732	echo ">>> compiler=mpif90"
1733	else
1734	compiler_name=pgf95
1735	echo ">>> compiler=pgf95"
1736	fi;;
1737	(nech) compiler_name=sxmpif90;;
1738	(decalpha) compiler_name=f95;;
1739	(ibm\|ibmb\|ibmh\|ibms\|ibmy) compiler_name=mpxlf95_r;;
1740	(*) printf "\n +++ unknown host name: $localhost \n";
1741	locat=localhost; exit;;
1742	esac
1743	fi
1744
1745
1746	# COMPILER AUF NECK UEBERSCHREIBEN
1747	[[ $localhost = neck ]] && compiler_name=mpif90
1748
1749
1750
1751	# PRAEPROZESSOR-PFAD BESTIMMEN
1752	case $localhost in
1753	(decalpha\|ibm\|ibmb\|ibmh\|ibms\|ibmy\|unics) praeproc=cpp;;
1754	esac
1755
1756
1757	# TEMPORAEREN KATALOGNAMEN BESTIMMEN
1758	kennung=$RANDOM
1759	if [[ "$tmp_user_catalog" = "" ]]
1760	then
1761	if [[ $localhost = ibmb \|\| $localhost = ibmh ]]
1762	then
1763	tmp_user_catalog=$TMPDIR
1764	elif [[ $localhost = nech ]]
1765	then
1766	tmp_user_catalog=$WRKSHR
1767	else
1768	tmp_user_catalog=/tmp
1769	fi
1770	fi
1771	TEMPDIR=$tmp_user_catalog/${usern}.$kennung
1772
1773
1774	# KATALOGNAMEN FUER ZWISCHENSPEICHERUNG VON FORTSETZUNGSLAUFDATEIEN
1775	# BESTIMMEN
1776	if [[ "$tmp_data_catalog" = "" ]]
1777	then
1778	if [[ $localhost = ibmb \|\| $localhost = ibmh ]]
1779	then
1780	tmp_data_catalog=$WORK/mrun_restart_data
1781	elif [[ $localhost = nech ]]
1782	then
1783	tmp_data_catalog=$WRKSHR/mrun_restart_data
1784	else
1785	tmp_data_catalog=/tmp/mrun_restart_data
1786	fi
1787	fi
1788
1789
1790	# EVENTUELL BEI LOKALEN RECHNUNGEN $-ZEICHEN IN ENVIRONMENT-VARIABLEN
1791	# ERSETZEN
1792	if [[ $do_remote = false && $do_compile = true ]]
1793	then
1794	eval fopts=\"$fopts\"
1795	eval lopts=\"$lopts\"
1796	fi
1797
1798
1799
1800	# COMPILE- UND LINK-OPTIONEN BESTIMMEN
1801	FOPTS="$fopts"
1802	LOPTS="$lopts"
1803	ROPTS="$ropts"
1804	if [[ ( $(echo $host \| cut -c1-3) = nec \|\| $(echo $host \| cut -c1-3) = ibm \|\| $host = lctit ) && -n $numprocs ]]
1805	then
1806	XOPT="-X $numprocs"
1807	fi
1808
1809
1810	# BEI VERWENDUNG VON DVRP-SOFTWARE MUSS ENTSPECHENDE GRAFIK-BIBLIOTHEK
1811	# MIT EINGEBUNDEN WERDEN
1812	if [[ -n $package_list ]]
1813	then
1814	if [[ $(echo $package_list \| grep -c dvrp_graphics) != 0 ]]
1815	then
1816
1817	# DVRP-GRAFIK GIBT ES NUR AUF DER IBM AM HLRN, AUF NECH/NECK UND
1818	# DEM NOTEBOOK SCIROCCO
1819	if [[ $host != ibmh && $host != nech && $host != neck && $host != lcmuk && "$local_compile" != true ]]
1820	then
1821	printf "\n"
1822	printf "\n +++ option -p with package \"dvrp_graphics\" only allowed on nech and ibmh"
1823	locat=parameter; exit
1824	fi
1825	if [[ $host = ibmh ]]
1826	then
1827	if [[ $cond1 = debug \|\| $cond2 = debug ]]
1828	then
1829	FOPTS="-I/home/h/hzazchmi/lib/debug $FOPTS"
1830	LOPTS="$LOPTS -L/home/h/hzazchmi/lib/debug -lDVRP2 -lftp"
1831	else
1832	FOPTS="-I/home/h/nikevita/lib_stable/optimize $FOPTS"
1833	LOPTS="$LOPTS -L/home/h/nikevita/lib_stable/optimize -lDVRP2 -lftp"
1834	fi
1835	elif [[ $host = nech ]]
1836	then
1837	FOPTS="-I/import/ds9b/ipf2/b/b323014/lib/optimize $FOPTS"
1838	LOPTS="$LOPTS -L/import/ds9b/ipf2/b/b323014/lib/optimize -lDVRP2 -lftp"
1839	elif [[ $host = neck ]]
1840	then
1841	FOPTS="-I/home/DSRC/NC/tatuyama/pub/dvrp $FOPTS"
1842	LOPTS="$LOPTS -L/home/DSRC/NC/tatuyama/pub/dvrp -lDVRP2 -lftp"
1843	elif [[ $host = lcmuk ]]
1844	then
1845	FOPTS="-I/usr/local/lib/dvrp/optimize $FOPTS"
1846	LOPTS="$LOPTS -L/usr/local/lib/dvrp/optimize -lDVRP2 -lftp"
1847	fi
1848	fi
1849	fi
1850
1851
1852	# EVTL. EINBINDEN DER NETCDF-BIBLIOTHEK
1853	if [[ $netcdf_support = true ]]
1854	then
1855	case $host in
1856	(decalpha) FOPTS="-I${netcdf_path}/include $FOPTS"
1857	LOPTS="$LOPTS -L${netcdf_path}/lib -lnetcdf";;
1858	(ibmb\|ibmh) FOPTS="-I ${netcdf_path}/include-64 $FOPTS"
1859	LOPTS="$LOPTS -L${netcdf_path}/lib -lnetcdf";;
1860	(ibms) FOPTS="-I /applic/netcdf64/src/f90 $FOPTS"
1861	LOPTS="$LOPTS -L${netcdf_path} -lnetcdf";;
1862	(ibmy) FOPTS="-I ${netcdf_path}/include $FOPTS"
1863	LOPTS="$LOPTS -L${netcdf_path}/lib -lnetcdf";;
1864	(lcmuk\|nech\|neck) FOPTS="-I ${netcdf_path}/include $FOPTS"
1865	LOPTS="$LOPTS -L${netcdf_path}/lib -lnetcdf";;
1866	(lctit) FOPTS="-I ${netcdf_path}/src/f90 $FOPTS"
1867	LOPTS="$LOPTS -L${netcdf_path}/src/libsrc -lnetcdf";;
1868
1869	esac
1870	fi
1871
1872	# PRUEFEN DER CPU-ZEIT. (CPUMAX WIRD ALS ENV-VARIABLE VOM HAUTPRO-
1873	# GRAMM BENOETIGT
1874	done=false
1875	while [[ $done = false ]]
1876	do
1877	cputime=$cpumax
1878	if (( $cputime == 0 ))
1879	then
1880	printf "\n +++ cpu-time is undefined"
1881	printf "\n >>> Please type CPU-time in seconds as INTEGER:"
1882	printf "\n >>> "
1883	read cputime 1>/dev/null 2>&1
1884	else
1885	done=true
1886	fi
1887	cpumax=$cputime
1888	done
1889
1890	(( minuten = cputime / 60 ))
1891	(( sekunden = cputime - minuten * 60 ))
1892
1893
1894	# PRUEFEN DER KERNSPEICHERANFORDERUNG
1895	if [[ $do_batch = true ]]
1896	then
1897	done=false
1898	while [[ $done = false ]]
1899	do
1900	if (( memory == 0 ))
1901	then
1902	printf "\n +++ memory demand is undefined"
1903	printf "\n >>> Please type memory in MByte per process as INTEGER:"
1904	printf "\n >>> "
1905	read memory 1>/dev/null 2>&1
1906	else
1907	done=true
1908	fi
1909	done
1910	fi
1911
1912
1913	# PRUEFEN, OB FUER REMOTE-RECHNUNGEN EIN BENUTZERNAME ANGEGEBEN WURDE
1914	if [[ $do_remote = true && -z $remote_username ]]
1915	then
1916	while [[ -z $remote_username ]]
1917	do
1918	printf "\n +++ username on remote host \"$host\" is undefined"
1919	printf "\n >>> Please type username:"
1920	printf "\n >>> "
1921	read remote_username
1922	done
1923	mc="$mc -u$remote_username"
1924	fi
1925
1926	###########################################################################
1927	# HEADER-AUSGABE
1928	###########################################################################
1929
1930
1931	calltime=$(date)
1932	printf "\n"
1933	# [[ $silent = false ]] && clear
1934	printf "#--------------------------------------------------------------# \n"
1935	printf "\| $version$calltime \| \n"
1936	printf "\| \| \n"
1937	spalte1="called on:"; spalte2=$localhost_realname
1938	printf "\| $spalte1$spalte2 \| \n"
1939	if [[ $local_compile = false ]]
1940	then
1941	if [[ $do_remote = true ]]
1942	then
1943	spalte1="execution on:"; spalte2="$host (username: $remote_username)"
1944	else
1945	spalte1="execution on:"; spalte2="$host ($localhost_realname)"
1946	fi
1947	else
1948	spalte1="compiling test only!"; spalte2=""
1949	fi
1950	printf "\| $spalte1$spalte2 \| \n"
1951	if [[ -n $numprocs ]]
1952	then
1953	spalte1="number of PEs:"; spalte2=$numprocs
1954	printf "\| $spalte1$spalte2 \| \n"
1955	fi
1956	if [[ -n $tasks_per_node ]]
1957	then
1958	spalte1="tasks per node:"; spalte2="$tasks_per_node (number of nodes: $nodes)"
1959	printf "\| $spalte1$spalte2 \| \n"
1960	fi
1961	if [[ $threads_per_task != 1 ]]
1962	then
1963	spalte1="threads per task:"; spalte2="$threads_per_task"
1964	printf "\| $spalte1$spalte2 \| \n"
1965	fi
1966	printf "\| \| \n"
1967	if [[ $do_compile = true ]]
1968	then
1969	spalte1=cpp-directives:; spalte2=$C_PPOPTS
1970	printf "\| $spalte1$spalte2 \| \n"
1971	zeile=$(echo "$C_PPOPTS" \| cut -c41-)
1972	while [[ "$zeile" != "" ]]
1973	do
1974	spalte1=""
1975	spalte2=$zeile
1976	printf "\| $spalte1$spalte2 \| \n"
1977	zeile=$(echo "$zeile" \| cut -c41-)
1978	done
1979
1980	spalte1=compiler-options:; spalte2="$FOPTS $MODULE_OPTIONS"
1981	printf "\| $spalte1$spalte2 \| \n"
1982	zeile=$(echo "$FOPTS $MODULE_OPTIONS" \| cut -c41-)
1983	while [[ "$zeile" != "" ]]
1984	do
1985	spalte1=""
1986	spalte2=$zeile
1987	printf "\| $spalte1$spalte2 \| \n"
1988	zeile=$(echo "$zeile" \| cut -c41-)
1989	done
1990
1991	spalte1=linker-options:; spalte2=$LOPTS
1992	printf "\| $spalte1$spalte2 \| \n"
1993	zeile=$(echo "$LOPTS" \| cut -c41-)
1994	while [[ "$zeile" != "" ]]
1995	do
1996	spalte1=""
1997	spalte2=$zeile
1998	printf "\| $spalte1$spalte2 \| \n"
1999	zeile=$(echo "$zeile" \| cut -c41-)
2000	done
2001
2002	spalte1="main program":; spalte2=$mainprog
2003	printf "\| $spalte1$spalte2 \| \n"
2004	if [[ "$use_makefile" = true ]]
2005	then
2006	spalte1="using \"make\" for com"; spalte2="piling and linking"
2007	printf "\| $spalte1$spalte2 \| \n"
2008	fi
2009	# if [[ $vtk_graphics = true ]]
2010	# then
2011	# spalte1=""; spalte2="wird in C++ - Programm eingebunden (vtk)"
2012	# printf "\| $spalte1$spalte2 \| \n"
2013	# fi
2014	else
2015	spalte1=executable:; spalte2=$executable
2016	printf "\| $spalte1$spalte2 \| \n"
2017	fi
2018	printf "\| \| \n"
2019	spalte1="base name of files":; spalte2=$fname
2020	printf "\| $spalte1$spalte2 \| \n"
2021	if [[ $fname != $afname ]]
2022	then
2023	spalte1="base name of input files":; spalte2=$afname
2024	printf "\| $spalte1$spalte2 \| \n"
2025	fi
2026	spalte1="INPUT control list":; spalte2=$input_list
2027	printf "\| $spalte1$spalte2 \| \n"
2028	spalte1="OUTPUT control list":; spalte2=$output_list
2029	printf "\| $spalte1$spalte2 \| \n"
2030
2031	if [[ $do_batch = true \|\| "$LOADLBATCH" = yes ]]
2032	then
2033	spalte1="memory demand / PE":; spalte2="$memory MB"
2034	printf "\| $spalte1$spalte2 \| \n"
2035	spalte1=CPU-time:; spalte2="$minuten:$sekunden"
2036	printf "\| $spalte1$spalte2 \| \n"
2037	fi
2038
2039	if [[ $do_compile = true ]]
2040	then
2041	printf "\| \| \n"
2042	printf "\| Files to be compiled: \| \n"
2043	zeile=$source_list
2044	while [[ "$zeile" != "" ]]
2045	do
2046	spalte3=$zeile
2047	printf "\| $spalte3 \| \n"
2048	zeile=$(echo "$zeile" \| cut -c61-)
2049	done
2050	fi
2051	printf "#--------------------------------------------------------------#"
2052
2053
2054
2055	# BEDINGTE AUSGABE DER DATEIVERBINDUNGEN
2056	if [[ $do_trace = true ]]
2057	then
2058	(( i = 0 ))
2059	while (( i < iin ))
2060	do
2061	(( i = i + 1 ))
2062	if (( i == 1 ))
2063	then
2064	printf "\n\n >>> INPUT-file assignments:\n"
2065	fi
2066	printf "\n ${localin[$i]} : ${absnamein[$i]}"
2067	done
2068	(( i = 0 ))
2069	while (( i < iout ))
2070	do
2071	(( i = i + 1 ))
2072	if (( i == 1 ))
2073	then
2074	printf "\n\n >>> OUTPUT-file assignments:\n"
2075	fi
2076	printf "\n ${localout[$i]} : ${pathout[$i]}"
2077	done
2078	(( i = 0 ))
2079	while (( i < iic ))
2080	do
2081	(( i = i + 1 ))
2082	if (( i == 1 ))
2083	then
2084	printf "\n\n >>> INPUT-commands:\n"
2085	fi
2086	printf "\n ${in_command[$i]}"
2087	done
2088	(( i = 0 ))
2089	while (( i < ioc ))
2090	do
2091	(( i = i + 1 ))
2092	if (( i == 1 ))
2093	then
2094	printf "\n\n >>> OUTPUT-commands:\n"
2095	fi
2096	printf "\n ${out_command[$i]}"
2097	done
2098	fi
2099
2100
2101	# ABFRAGEN BEI AUFRUF AUF LOKALER MASCHINE
2102	if [[ $remotecall = false && $silent = false && $jobmo != BATCH ]]
2103	then
2104	antwort=dummy
2105	printf "\n\n"
2106	while [[ "$antwort" != y && "$antwort" != Y && "$antwort" != n && "$antwort" != N ]]
2107	do
2108	printf " >>> everything o.k. (y/n) ? "
2109	read antwort
2110	done
2111	if [[ $antwort = n \|\| $antwort = N ]]
2112	then
2113	locat=user_abort; (( iec = 0 )); exit
2114	fi
2115	if [[ $do_batch = true ]]
2116	then
2117	printf " >>> batch-job will be created and submitted"
2118	else
2119	if [[ $local_compile = false ]]
2120	then
2121	printf " >>> MRUN will now continue to execute on this machine"
2122	else
2123	printf " >>> a test compilation will now be carried out on this machine"
2124	fi
2125	fi
2126	fi
2127
2128
2129
2130
2131	# FALLS AUF DIESER MASCHINE GERECHNET WERDEN SOLL, WERDEN JETZT ENTSPRE-
2132	# CHENDE AKTIONEN DURCHGEFUEHRT
2133	if [[ $do_batch = false ]]
2134	then
2135
2136
2137	# TEMPORAEREN KATALOG ERZEUGEN
2138	mkdir -p $TEMPDIR
2139	chmod go+rx $TEMPDIR
2140	tmpcreate=true
2141
2142
2143	# SAEMTLICHE QUELLTEXT-DATEIEN BZW. AUSFUEHRBARES PROGRAMM IN
2144	# TEMPORAERES VERZEICHNIS KOPIEREN
2145	if [[ $do_compile = true ]]
2146	then
2147
2148	# ON NEC, COMPILATION IS DONE ON HOST CROSS VIA CROSS COMPILING
2149	# CREATE A TEMPORARY DIRECTORY ON THAT MACHINE (HOME MOUNTED VIA NFS)
2150	if [[ $localhost = nech ]]
2151	then
2152	TEMPDIR_COMPILE=$HOME/work/${usern}.$kennung
2153	if mkdir -p $TEMPDIR_COMPILE
2154	then
2155	printf "\n *** \"$TEMPDIR_COMPILE\" "
2156	printf "\n is generated as temporary directory for cross compiling\n"
2157	else
2158	printf "\n +++ creating directory \"$TEMPDIR_COMPILE\" "
2159	printf "\n needed for cross compilation failed"
2160	locat=compile
2161	exit
2162	fi
2163	else
2164	TEMPDIR_COMPILE=$TEMPDIR
2165	fi
2166
2167	if [[ "$use_makefile" = true ]]
2168	then
2169
2170	# PFADNAMEN FUER DAS MAKE-DEPOSITORY ERMITTELN
2171	line=""
2172	grep "%depository_path" $config_file \| while read line
2173	do
2174	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
2175	then
2176	if [[ "$(echo $line \| cut -d" " -s -f3)" = "" ]]
2177	then
2178	global_depository_path=`echo $line \| cut -d" " -s -f2`
2179	fi
2180	fi
2181	done
2182
2183	line=""
2184	grep " $localhost" $config_file \| grep "%depository_path" \| while read line
2185	do
2186	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
2187	then
2188	local_depository_path=`echo $line \| cut -d" " -s -f2`
2189	fi
2190	done
2191
2192	if [[ "$local_depository_path" = "" ]]
2193	then
2194	if [[ "$global_depository_path" != "" ]]
2195	then
2196	local_depository_path=$global_depository_path
2197	else
2198	printf "\n\n +++ no depository path found in configuration file"
2199	printf "\n for local host \"$localhost\" "
2200	printf "\n please set \"\%depository_path\" in configuration file\n"
2201	locat=config_file; exit
2202	fi
2203	fi
2204	eval local_depository_path=$local_depository_path
2205
2206	basename=`print $mainprog \| cut -f1 -d"."`
2207	eval make_depository=${local_depository_path}/${basename}_current_version.tar
2208	if [[ ! -f $make_depository ]]
2209	then
2210	printf "\n"
2211	printf "\n *** WARNING: make depository \"$make_depository\" not found"
2212	printf "\n \"make\" will fail, if the Makefile or other source files are missing\n"
2213	else
2214	cp $make_depository $TEMPDIR_COMPILE
2215	cd $TEMPDIR_COMPILE
2216	tar -xf $make_depository > /dev/null 2>&1
2217	cd - > /dev/null
2218	fi
2219
2220	cp SOURCES_FOR_RUN_$fname/* $TEMPDIR_COMPILE
2221
2222	# FALLS USER-INTERFACE VORHANDEN UND AUF DATEI MIT ANDEREM NAMEN
2223	# ALS user_interface.f90 LIEGT, DIESEN GEAENDERTEN NAMEN INS
2224	# MAKEFILE EINTRAGEN
2225	cd $TEMPDIR_COMPILE
2226	interface_file=`grep -l "END SUBROUTINE user_parin" $source_list`
2227	if [[ "$interface_file" != "" ]]
2228	then
2229	interface_file=`echo $interface_file \| cut -d"." -f1`
2230	mv Makefile Makefile_old
2231	sed "s/user_interface/$interface_file/g" Makefile_old > Makefile
2232	fi
2233	cd - > /dev/null
2234	fi
2235	else
2236	cp $executable ${TEMPDIR}/a.out
2237	fi
2238
2239
2240	# WECHSEL IN TEMPORAEREN KATALOG
2241	cd $TEMPDIR
2242	printf "\n *** changed to temporary directory: $TEMPDIR"
2243
2244
2245	# OUTPUT-DATEI-VERBINDUNGEN AUF TEMPORAERER DATEI ABLEGEN
2246	# DIESE DATEI KANN VON SPAETER AUFZURUFENDEN BENUTZERPROZEDUREN GELESEN
2247	# WERDEN, UM ZU LOKALEN DATEINAMEN GEHOERENDE PERMANENTE NAMEN ZU
2248	# ERMITTELN
2249	(( i = 0 ))
2250	while (( i < iout ))
2251	do
2252	(( i = i + 1 ))
2253	if [[ "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = tra \|\| "${actionout[$i]}" = trpe ]]
2254	then
2255	printf "${localout[$i]} ${actionout[$i]}\n${pathout[$i]}\n${localhost}_${fname}${endout[$i]}\n" >> OUTPUT_FILE_CONNECTIONS
2256	else
2257	printf "${localout[$i]} ${actionout[$i]}\n${pathout[$i]}\n${frelout[$i]}\n" >> OUTPUT_FILE_CONNECTIONS
2258	fi
2259	done
2260
2261
2262	# EVTL. UEBERSETZUNGSAKTIONEN STARTEN
2263	if [[ $do_compile = true ]]
2264	then
2265
2266
2267	# COMPILING WITH MAKE (ON NEC COMPILER IS CALLED ON HOST CROSS)
2268	if [[ "$use_makefile" = true ]]
2269	then
2270	printf "\n\n\n *** compilation starts \n$striche\n"
2271	printf " *** compilation with make using following options:\n"
2272	printf " compilername: $compiler_name\n"
2273	printf " options: $FOPTS\n"
2274	printf " preprocessor-directives: $C_PPOPTS \n"
2275	printf " linker-options: $LOPTS \n"
2276	printf " source code files: $source_list \n"
2277
2278	if [[ $localhost = nech ]]
2279	then
2280	ssh 136.172.44.192 -l $usern ". /SX/opt/etc/initsx.sh; cd \$HOME/work/${usern}.$kennung; sxmake -f Makefile PROG=a.out F90=$compiler_name COPT=\"$C_PPOPTS\" F90FLAGS=\"$FOPTS\" LDFLAGS=\"$LOPTS\" "
2281	cp $TEMPDIR_COMPILE/a.out .
2282	[[ $? != 0 ]] && compile_error=true
2283	rm -rf $TEMPDIR_COMPILE
2284	else
2285	make -f Makefile PROG=a.out F90=$compiler_name COPT="$C_PPOPTS" F90FLAGS="$FOPTS" LDFLAGS="$LOPTS"
2286	fi
2287
2288	# UEBERSETZUNG "VON HAND" (OHNE MAKE)
2289	else
2290
2291
2292	# UEBERSETZUNG DER QUELLTEXT-DATEIEN UND DES HAUPTPROGRAMMS
2293	# $CPPOPTS FUER CPP-PRAEPROZESSOR WURDEN OBEN BESTIMMT
2294	printf "\n\n\n *** compilation starts \n$striche\n"
2295
2296
2297	# VORWEG EVTL. UEBERSETZUNG VON PROGRAMMTEILEN MIT SPEZIELLEN
2298	# COMPILERN UND/ODER COMPILEROPTIONEN. DIESE WERDEN BEI DER SPAETEREN
2299	# EIGENTLICHEN UEBERSETZUNG ALS OBJECT-FILES EINGEBUNDEN
2300	new_source_list=""
2301	for filename in $source_list
2302	do
2303
2304	basename=`print $filename \| cut -f1 -d"."`
2305
2306	# EVTL. SPEZIELLEN COMPILER FUER UP BESTIMMEN
2307	comp_var=$(eval echo \$comp_$basename) # \$ liefert evtl. fuer source alternativ vereinbarten Compiler
2308	comp_opt_var=$(eval echo \$$basename) # \$$ liefert evtl. fuer source vereinbarte Compiler-Environment-Variable
2309
2310	if [[ "$comp_var" = "" && "$comp_opt_var" = "" ]]
2311	then
2312	new_source_list="$new_source_list "$filename
2313	else
2314
2315	if [[ "$comp_var" = "" ]]
2316	then
2317	SPECIAL_COMPILER=$compiler_name
2318	else
2319	SPECIAL_COMPILER=$comp_var
2320	fi
2321
2322	if [[ "$comp_opt_var" = "" ]]
2323	then
2324	SPECIAL_FOPTS=$FOPTS
2325	else
2326	SPECIAL_FOPTS="$parallel_options $(eval echo \$$comp_opt_var)"
2327	fi
2328
2329	printf " *** compiling of $filename with special compiler call: $SPECIAL_COMPILER $CPPOPTS -c $SPECIAL_FOPTS \n"
2330	$SPECIAL_COMPILER $C_PPOPTS -c $SPECIAL_FOPTS $MODULE_OPTIONS $filename
2331	if [[ $? != 0 ]]
2332	then
2333	printf "\n +++ compiling error occured"
2334	locat=compile
2335	exit
2336	fi
2337	new_source_list="$new_source_list "${basename}.o
2338	fi
2339	done
2340	source_list="$new_source_list"
2341
2342
2343	# EIGENTLICHE UEBERSETZUNG MIT DEN NORMALEN OPTIONEN
2344	printf " *** compilation with standard options: $compiler_name $FOPTS $MODULE_OPTIONS \n"
2345	printf " preprocessor-directives: $C_PPOPTS \n"
2346	printf " linker-options: $LOPTS \n"
2347	printf " source code files: $source_list \n"
2348
2349	$compiler_name $C_PPOPTS $FOPTS $MODULE_OPTIONS $LOPTS $source_list
2350
2351	fi
2352	if [[ $? != 0 \|\| "$compile_error" = true \|\| "$module_compile_error" = true ]]
2353	then
2354	printf "\n +++ error occured while compiling or linking"
2355	locat=compile
2356	exit
2357	else
2358	printf "$striche\n *** compilation finished \n"
2359	fi
2360	fi
2361
2362
2363	# FALLS NUR TESTWEISE KOMPILIERT WERDEN SOLLTE, IST MRUN JETZT FERTIG
2364	if [[ $local_compile = true ]]
2365	then
2366	cd $HOME
2367	rm -rf $TEMPDIR
2368	locat=local_compile; exit
2369	fi
2370
2371
2372	# BEREITSTELLEN DER INPUT-DATEIEN
2373	# SCHLEIFE UEBER ALLE VOM BENUTZER ANGEGEBENEN DATEIEN
2374	(( i = 0 ))
2375	while (( i < iin ))
2376	do
2377	(( i = i + 1 ))
2378	if (( i == 1 ))
2379	then
2380	printf "\n\n *** providing INPUT-files:\n$striche"
2381	fi
2382
2383
2384	# OPTIONALE DATEIEN BEI NICHTVORHANDENSEIN UEBERGEHEN
2385	if [[ "${transin[$i]}" = unavailable ]]
2386	then
2387	if [[ "${extin[$i]}" = "" \|\| "${extin[$i]}" = " " ]]
2388	then
2389	printf "\n +++ WARNING: input file \"${pathin[$i]}/${afname}${endin[$i]}\" "
2390	printf "\n is not available!"
2391	else
2392	printf "\n +++ WARNING: input file \"${pathin[$i]}/${afname}${endin[$i]}.${extin[$i]}\" "
2393	printf "\n is not available!"
2394	fi
2395	continue
2396	fi
2397
2398	# PRUEFEN, OB EINZELDATEI ODER DATEI PRO PROZESSOR
2399	files_for_pes=false; datentyp=file
2400	if [[ "${actionin[$i]}" = pe && -n $numprocs ]]
2401	then
2402	files_for_pes=true; datentyp=directory
2403	actionin[$i]=""
2404	elif [[ "${actionin[$i]}" = pe && ! -n $numprocs ]]
2405	then
2406	actionin[$i]=""
2407	elif [[ "${actionin[$i]}" = arpe && -n $numprocs ]]
2408	then
2409	files_for_pes=true; datentyp=directory
2410	actionin[$i]="ar"
2411	elif [[ "${actionin[$i]}" = arpe && ! -n $numprocs ]]
2412	then
2413	actionin[$i]="ar"
2414	elif [[ "${actionin[$i]}" = flpe && -n $numprocs ]]
2415	then
2416	files_for_pes=true; datentyp=directory
2417	actionin[$i]="fl"
2418	elif [[ "${actionin[$i]}" = flpe && ! -n $numprocs ]]
2419	then
2420	actionin[$i]="fl"
2421	fi
2422
2423	if [[ $files_for_pes = true ]]
2424	then
2425	printf "\n >>> INPUT: ${absnamein[$i]}/.... to ${localin[$i]}"
2426	else
2427	printf "\n >>> INPUT: ${absnamein[$i]} to ${localin[$i]}"
2428	fi
2429
2430	# INPUT-DATEI FUER EINEN FORTSETZUNGSLAUF. ES WIRD GEPRUEFT,
2431	# OB DIESE DATEI NOCH AUF DEM TEMPORAEREN DATENKATALOG VORHANDEN
2432	# IST. FALLS NICHT, WIRD VERSUCHT, SIE ANSCHLIESSEND VOM ARCHIV-
2433	# SERVER ZU HOLEN
2434	if [[ "${actionin[$i]}" = fl ]]
2435	then
2436	printf "\n $datentyp will be fetched from temporary directory \"${tmp_data_catalog}\" !"
2437	if [[ $files_for_pes = false ]]
2438	then
2439	if [[ -f "$tmp_data_catalog/${frelin[$i]}" ]]
2440	then
2441	ln $tmp_data_catalog/${frelin[$i]} ${localin[$i]}
2442	got_tmp[$i]=true
2443	elif [[ -f "$WORK/${frelin[$i]}" && $ignore_archive_error = true ]]
2444	then
2445	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" !"
2446	printf "\n *** trying to use backup copy in \"$WORK\" "
2447	cp $WORK/${frelin[$i]} ${localin[$i]}
2448	else
2449	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" "
2450	printf "\n or \"$tmp_data_catalog\" does not exist!"
2451	printf "\n *** trying to get copy from archive"
2452	actionin[$i]=ar
2453	fi
2454	else
2455	if [[ -d "$tmp_data_catalog/${frelin[$i]}" ]]
2456	then
2457	mkdir ${localin[$i]}
2458	ln $tmp_data_catalog/${frelin[$i]}/* ${localin[$i]}
2459	got_tmp[$i]=true
2460	elif [[ -d "$WORK/${frelin[$i]}" && $ignore_archive_error = true ]]
2461	then
2462	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" !"
2463	printf "\n *** trying to use backup copy in \"$WORK\" "
2464	cp -r $WORK/${frelin[$i]} ${localin[$i]}
2465	else
2466	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" "
2467	printf "\n or \"$tmp_data_catalog\" does not exist!"
2468	printf "\n *** trying to get copy from archive"
2469	actionin[$i]=ar
2470	fi
2471	fi
2472	fi
2473
2474
2475	# DATEI LIEGT AUF ARCHIV-SERVER
2476	if [[ "${actionin[$i]}" = ar ]]
2477	then
2478
2479	if [[ $files_for_pes = false ]]
2480	then
2481	printf "\n file will be restored from archive-system ($archive_system)!"
2482	else
2483	printf "\n directory will be restored from archive-system ($archive_system)!"
2484	fi
2485
2486	file_restored=false
2487
2488	if [[ $archive_system = asterix ]]
2489	then
2490	do_stagein=true
2491	(( stagein_anz = 0 ))
2492	while [[ $do_stagein = true ]]
2493	do
2494	if [[ $files_for_pes = false ]]
2495	then
2496	stagein -O ${frelin[$i]} > STAGEIN_OUTPUT
2497	else
2498	stagein -t -O ${frelin[$i]} > STAGEIN_OUTPUT
2499	fi
2500	cat STAGEIN_OUTPUT
2501	if [[ $(grep -c "st.msg:i24" STAGEIN_OUTPUT) != 0 ]]
2502	then
2503	file_restored=true
2504	do_stagein=false
2505	else
2506	(( stagein_anz = stagein_anz + 1 ))
2507	if (( stagein_anz == 10 ))
2508	then
2509	printf "\n +++ stagein stoped after 10 tries"
2510	locat=stage
2511	exit
2512	fi
2513	printf "\n +++ restoring from archive failed, trying again:"
2514	sleep 900
2515	fi
2516	done
2517	elif [[ $archive_system = DMF ]]
2518	then
2519	if [[ $files_for_pes = false ]]
2520	then
2521	printf "\n +++ restoring of single files impossible with $archive_system !\n"
2522	locat=DMF
2523	exit
2524	else
2525	find $ARCHIVE/${frelin[$i]} -type m -print \| dmget
2526	cp -r $ARCHIVE/${frelin[$i]} $PWD
2527	file_restored=true
2528	fi
2529	elif [[ $archive_system = tivoli ]]
2530	then
2531	if [[ $files_for_pes = false ]]
2532	then
2533	if [[ $localhost = ibmh ]]
2534	then
2535	ssh $usern@hdata.hlrn.de "cp $PERM/${frelin[$i]} $PWD"
2536	else
2537	ssh $usern@bdata.hlrn.de "cp $PERM/${frelin[$i]} $PWD"
2538	fi
2539	else
2540	(( inode = 0 ))
2541	while (( inode < nodes ))
2542	do
2543	if [[ $localhost = ibmh ]]
2544	then
2545	ssh $usern@hdata.hlrn.de "cd $PWD; tar xf $PERM/${frelin[$i]}/${frelin[$i]}.node_$inode.tar"
2546	else
2547	ssh $usern@bdata.hlrn.de "cd $PWD; tar xf $PERM/${frelin[$i]}/${frelin[$i]}.node_$inode.tar"
2548	fi
2549	(( inode = inode + 1 ))
2550	done
2551	fi
2552	file_restored=true
2553	elif [[ $archive_system = ut ]]
2554	then
2555	if [[ $files_for_pes = false ]]
2556	then
2557	cp $UT/${frelin[$i]} .
2558	else
2559	(( inode = 0 ))
2560	while (( inode < nodes ))
2561	do
2562	tar xf $UT/${frelin[$i]}/${frelin[$i]}.node_$inode.tar
2563	(( inode = inode + 1 ))
2564	done
2565	fi
2566	file_restored=true
2567	else
2568	printf "\n +++ archive_system=\"$archive_system\" restore impossible!"
2569	locat=rearchive
2570	exit
2571	fi
2572
2573	if [[ $file_restored = true ]]
2574	then
2575
2576	# DATEI AUCH AUF TEMPORAERES DATENVERZEICHNIS LEGEN, DAMIT
2577	# SIE BEI WEITEREN ZUGRIFFEN NOCH VORHANDEN IST
2578	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog; chmod g+rx $tmp_data_catalog
2579	if [[ $files_for_pes = false ]]
2580	then
2581	ln -f ${frelin[$i]} $tmp_data_catalog/${frelin[$i]}
2582	else
2583	mkdir $tmp_data_catalog/${frelin[$i]}
2584	ln -f ${frelin[$i]}/* $tmp_data_catalog/${frelin[$i]}
2585	fi
2586	got_tmp[$i]=true
2587
2588	# DATEI UNTER LOKALEM NAMEN ZUR VERFUEGUNG STELLEN
2589	mv ${frelin[$i]} ${localin[$i]}
2590
2591	fi
2592	fi
2593
2594
2595	# DATEI LIEGT IM VOM BENUTZER ANGEGEBENEN VERZEICHNIS
2596	if [[ "${actionin[$i]}" = "" \|\| "${actionin[$i]}" = "di" \|\| "${actionin[$i]}" = "npe" ]]
2597	then
2598
2599	if [[ "${actionin[$i]}" = "npe" && -n $numprocs ]]
2600	then
2601
2602	# DATEI WIRD FUER DIE PROZESSOREN EINES PARALLERECHNERS BEREITGESTELLT
2603	printf "\n file will be provided for $numprocs processors"
2604	mkdir ${localin[$i]}
2605	ival=$numprocs
2606	(( ii = 0 ))
2607	while (( ii <= ival-1 ))
2608	do
2609	if (( ii < 10 ))
2610	then
2611	cp ${absnamein[$i]} ${localin[$i]}/_000$ii
2612	elif (( ii < 100 ))
2613	then
2614	cp ${absnamein[$i]} ${localin[$i]}/_00$ii
2615	elif (( ii < 1000 ))
2616	then
2617	cp ${absnamein[$i]} ${localin[$i]}/_0$ii
2618	else
2619	cp ${absnamein[$i]} ${localin[$i]}/_$ii
2620	fi
2621	(( ii = ii + 1 ))
2622	done
2623
2624	else
2625
2626	if [[ $files_for_pes = true ]]
2627	then
2628
2629	# DIE DEN PROZESSOREN EINES PARALLELRECHNERS ZUGEHOERIGEN
2630	# DATEIEN WERDEN BEREITGESTELLT, INDEM ZUERST DER GESAMTE
2631	# KATALOGINHALT KOPIERT UND DANN DIE EINZELNEN DATEIEN
2632	# PER MOVE UMBENANNT WERDEN
2633	printf "\n providing $numprocs files for the respective processors"
2634	mkdir ${localin[$i]}
2635	cp -r ${absnamein[$i]}/* ${localin[$i]}
2636
2637	else
2638	# BEREITSTELLUNG AUF EINPROZESSORRECHNERN
2639	cp ${absnamein[$i]} ${localin[$i]}
2640	fi
2641	fi
2642	fi
2643
2644	done
2645	if (( i != 0 ))
2646	then
2647	printf "\n$striche\n *** all INPUT-files provided \n"
2648	fi
2649
2650
2651	# NAMELIST-DATEI MIT WERTEN VON ENVIRONMENT-VARIABLEN ERZEUGEN (ZU
2652	# LESEN VON PALM)
2653	cat > ENVPAR << %%END%%
2654	&envpar run_identifier = '$fname', host = '$localhost',
2655	write_binary = '$write_binary', tasks_per_node = $tasks_per_node,
2656	maximum_cpu_time_allowed = ${cpumax}. /
2657
2658	%%END%%
2659
2660
2661	# EVENTUELLE INPUT-KOMMANDOS ABARBEITEN
2662	(( i = 0 ))
2663	while (( i < iic ))
2664	do
2665	(( i = i + 1 ))
2666	if (( i == 1 ))
2667	then
2668	printf "\n\n *** execution of INPUT-commands:\n$striche"
2669	fi
2670	printf "\n >>> ${in_command[$i]}"
2671	eval ${in_command[$i]}
2672	if (( i == iic ))
2673	then
2674	printf "\n$striche\n"
2675	fi
2676	done
2677
2678
2679	# VERBLEIBENDE CPU-ZEIT BERECHNEN
2680	cpurest=${cpumax}.
2681
2682
2683	# PROGRAMMSTART
2684	printf "\n\n *** execution starts in directory\n \"`pwd`\"\n$striche\n"
2685	PATH=$PATH:$TEMPDIR
2686
2687	if [[ "$cond1" = debug \|\| "$cond2" = debug ]]
2688	then
2689	if [[ "$ENVIRONMENT" = BATCH ]]
2690	then
2691	printf "\n +++ debug is allowed in interactive mode only"
2692	locat=debug
2693	exit
2694	fi
2695	if [[ $localhost = decalpha ]]
2696	then
2697	dxladebug a.out
2698	elif [[ $localhost = ibmb \|\| $localhost = ibmh ]]
2699	then
2700
2701	# SETUP THE IBM MPI ENVIRONMENT
2702	export MP_SHARED_MEMORY=yes
2703	export AIXTHREADS_SCOPE=S
2704	export OMP_NUM_THREADS=$threads_per_task
2705	export AUTHSTATE=files
2706	export XLFRTEOPTS="nlwidth=132:err_recovery=no" # RECORD-LENGTH OF NAMELIST-OUTPUT
2707
2708	# FOLLOWING OPTIONS ARE MANDATORY FOR TOTALVIEW
2709	export MP_ADAPTER_USE=shared
2710	export MP_CPU_USE=multiple
2711	export MP_TIMEOUT=1200
2712
2713	unset MP_TASK_AFFINITY
2714
2715	# SO FAR, TOTALVIEW NEEDS HOSTFILE MECHANISM FOR EXECUTION
2716	#(( ii = 1 ))
2717	#while (( ii <= $numprocs ))
2718	#do
2719	# echo $localhost_realname >> hostfile
2720	# (( ii = ii + 1 ))
2721	#done
2722	#export MP_HOSTFILE=hostfile
2723
2724	if [[ "$LOADLBATCH" = yes ]]
2725	then
2726	totalview poe a.out $ROPTS
2727	else
2728	echo totalview poe -a a.out -procs $numprocs -rmpool 0 -nodes 1 $ROPTS
2729	export TVDSVRLAUNCHCMD=ssh
2730	totalview poe -a a.out -procs $numprocs -rmpool 0 -nodes 1 $ROPTS
2731	fi
2732	else
2733	printf "\n +++ no debug available on \"$localhost\" "
2734	printf "\n or not implemented in mrun so far"
2735	locat=debug
2736	exit
2737	fi
2738	else
2739	if [[ -n $numprocs ]]
2740	then
2741
2742	# RUNNING THE PROGRAM ON PARALLEL MACHINES
2743	if [[ $(echo $host \| cut -c1-3) = ibm ]]
2744	then
2745	# SETUP THE IBM MPI ENVIRONMENT
2746	export MP_SHARED_MEMORY=yes
2747	export AIXTHREAD_SCOPE=S
2748	export OMP_NUM_THREADS=$threads_per_task
2749	export XLSMPOPTS="spins=0:yields=0:stack=20000000"
2750	export AUTHSTATE=files
2751	export XLFRTEOPTS="nlwidth=132:err_recovery=no" # RECORD-LENGTH OF NAMELIST-OUTPUT
2752	# export MP_PRINTENV=yes
2753
2754	# TUNING-VARIABLEN ZUR VERBESSERUNG DER KOMMUNIKATION
2755	# ZEIGEN ABER DERZEIT (SEP 04, FEDERATION) KAUM WIRKUNG
2756	export MP_WAIT_MODE=poll
2757	[[ $node_usage = not_shared ]] && export MP_SINGLE_THREAD=yes
2758	# export MP_EAGER_LIMIT=65535
2759
2760	# # TESTWEISE FUER TURBOMPI (JAN 05)
2761	# export MPJ_MTAB=128
2762	# export MPJ_ALLTOALL=1
2763	# export MPJ_ALLTOALLV=1
2764
2765	if [[ "$LOADLBATCH" = yes ]]
2766	then
2767	printf "\n--- Control: OMP_NUM_THREADS = \"$OMP_NUM_THREADS\" \n"
2768	if [[ "$cond1" = hpmcount \|\| "$cond2" = hpmcount ]]
2769	then
2770	/opt/optibm/HPM_2_4_1/bin/hpmcount a.out $ROPTS > aout_output 2>&1
2771	else
2772	poe ./a.out $ROPTS > aout_output 2>&1
2773	fi
2774	else
2775	if [[ $localhost = ibmb \|\| $localhost = ibmh \|\| $localhost = ibms ]]
2776	then
2777	poe a.out -procs $numprocs -nodes 1 -rmpool 0 $ROPTS > aout_output 2>&1
2778	elif [[ $localhost = ibmy ]]
2779	then
2780	if [[ -f $hostfile ]]
2781	then
2782	cp $hostfile hostfile
2783	else
2784	(( ii = 1 ))
2785	while (( ii <= $numprocs ))
2786	do
2787	echo $localhost_realname >> hostfile
2788	(( ii = ii + 1 ))
2789	done
2790	fi
2791	export MP_HOSTFILE=hostfile
2792	./a.out -procs $tasks_per_node $ROPTS > aout_output 2>&1
2793	else
2794	if [[ "$host_file" = "" ]]
2795	then
2796	printf "\n +++ no hostfile given in configuration file"
2797	locat=config_file
2798	exit
2799	else
2800	eval host_file=$host_file
2801	fi
2802	export MP_HOSTFILE=$host_file
2803	poe a.out -procs $numprocs -tasks_per_node $numprocs $ROPTS > aout_output 2>&1
2804	fi
2805	fi
2806	elif [[ $host = nech \|\| $host = neck ]]
2807	then
2808	(( ii = nodes ))
2809	if [[ $ii = 1 ]]
2810	then
2811	export F_ERRCNT=0 # acceptable number of errors before program is stopped
2812	export MPIPROGINF=YES
2813	# export F_TRACE=YES\|FMT1\|FMT2 # output of ftrace informations to job protocol
2814	echo "*** execution on single node with mpirun"
2815	mpirun -np $numprocs ./a.out $ROPTS > aout_output 2>&1
2816	else
2817	(( i = 0 ))
2818	while (( i < ii ))
2819	do
2820	echo "-h $i -p $tasks_per_node -e ./mpi_exec_shell" >> multinode_config
2821	(( i = i + 1 ))
2822	done
2823
2824	echo "#!/bin/sh" > mpi_exec_shell
2825	echo " " >> mpi_exec_shell
2826	echo "set -u" >> mpi_exec_shell
2827	echo "F_ERRCNT=0" >> mpi_exec_shell
2828	echo "MPIPROGINV=YES" >> mpi_exec_shell
2829	echo "OMP_NUM_THREADS=$threads_per_task" >> mpi_exec_shell
2830	echo "cpurest=$cpurest" >> mpi_exec_shell
2831	echo "fname=$fname" >> mpi_exec_shell
2832	echo "localhost=$localhost" >> mpi_exec_shell
2833	echo "return_addres=$return_addres" >> mpi_exec_shell
2834	echo "return_username=$return_username" >> mpi_exec_shell
2835	echo "tasks_per_node=$tasks_per_node" >> mpi_exec_shell
2836	echo "write_binary=$write_binary" >> mpi_exec_shell
2837	echo "use_seperate_pe_for_dvrp_output=$use_seperate_pe_for_dvrp_output" >> mpi_exec_shell
2838	echo " " >> mpi_exec_shell
2839	echo "export F_ERRCNT" >> mpi_exec_shell
2840	echo "export MPIPROGINV" >> mpi_exec_shell
2841	echo "export OMP_NUM_THREADS" >> mpi_exec_shell
2842	echo "export cpurest" >> mpi_exec_shell
2843	echo "export fname" >> mpi_exec_shell
2844	echo "export localhost" >> mpi_exec_shell
2845	echo "export return_addres" >> mpi_exec_shell
2846	echo "export return_username" >> mpi_exec_shell
2847	echo "export tasks_per_node" >> mpi_exec_shell
2848	echo "export write_binary" >> mpi_exec_shell
2849	echo "export use_seperate_pe_for_dvrp_output" >> mpi_exec_shell
2850	echo " " >> mpi_exec_shell
2851	echo "exec ./a.out > aout_output 2>&1" >> mpi_exec_shell
2852
2853	chmod u+x mpi_exec_shell
2854	export MPIPROGINF=YES
2855	mpirun -f multinode_config &
2856	wait
2857
2858	fi
2859	elif [[ $host = lcmuk ]]
2860	then
2861
2862	# COPY HOSTFILE FROM SOURCE DIRECTORY OR CREATE IT, IF IT
2863	# DOES NOT EXIST
2864	if [[ -f $hostfile ]]
2865	then
2866	cp $hostfile hostfile
2867	else
2868	(( ii = 1 ))
2869	while (( ii <= $numprocs / $threads_per_task ))
2870	do
2871	echo $localhost_realname >> hostfile
2872	(( ii = ii + 1 ))
2873	done
2874	fi
2875	(( ii = $numprocs / $threads_per_task ))
2876	eval zeile=\"`head -n $ii hostfile`\"
2877	printf "\n *** running on: $zeile"
2878	export OMP_NUM_THREADS=$threads_per_task
2879	if [[ $threads_per_task != 1 ]]
2880	then
2881	printf "\n threads per task: $threads_per_task"
2882	fi
2883	printf "\n\n"
2884	if [[ $scirocco = true ]]
2885	then
2886	mpiexec -machinefile hostfile -n $ii a.out $ROPTS > aout_output 2>&1
2887	else
2888	mpirun -machinefile hostfile -np $ii a.out $ROPTS > aout_output 2>&1
2889	fi
2890	elif [[ $host = decalpha ]]
2891	then
2892	dmpirun -np $numprocs a.out $ROPTS > aout_output 2>&1
2893	elif [[ $host = lctit ]]
2894	then
2895	export runfile=runfile.$kennung
2896
2897	echo "cd $PWD" > $runfile
2898	echo "export OMP_NUM_THREADS=$OMP_NUM_THREADS" >> $runfile
2899	echo "export cpurest=$cpurest" >> $runfile
2900	echo "export fname=$fname" >> $runfile
2901	echo "export localhost=$localhost" >> $runfile
2902	echo "export return_addres=$return_addres" >> $runfile
2903	echo "export return_username=$return_username" >> $runfile
2904	echo "export tasks_per_node=$tasks_per_node" >> $runfile
2905	echo "export write_binary=$write_binary" >> $runfile
2906	echo "export use_seperate_pe_for_dvrp_output=$use_seperate_pe_for_dvrp_output" >> $runfile
2907	echo "./a.out" >> $runfile
2908	chmod u+x $runfile
2909
2910	if [[ "$QUEUE" = interactive ]]
2911	then
2912	mpirun -np $numprocs $runfile $ROPTS > aout_output 2>&1
2913	else
2914	n1ge -fore -mpi $numprocs -q $queue $runfile $ROPTS > aout_output 2>&1
2915	fi
2916
2917	rm $runfile
2918	else
2919	mpprun -n $numprocs a.out $ROPTS > aout_output 2>&1
2920	fi
2921	[[ $? != 0 ]] && execution_error=true
2922
2923
2924	# PERFORMANCE-AUSWERTUNG MIT APPRENTICE
2925	if [[ "$cond1" = apprentice \|\| "$cond2" = apprentice ]]
2926	then
2927	apprentice
2928	fi
2929	else
2930	a.out $ROPTS > aout_output 2>&1
2931	fi
2932	fi
2933	if [[ $? != 0 \|\| $execution_error = true ]]
2934	then
2935
2936	# ABBRUCH BEI LAUFZEITFEHLER
2937	[[ ! ( "$cond1" = debug \|\| "$cond2" = debug ) ]] && cat aout_output
2938	printf "\n +++ runtime error occured"
2939	locat=execution
2940	exit
2941	else
2942	[[ ! ( "$cond1" = debug \|\| "$cond2" = debug ) ]] && cat aout_output
2943	printf "\n$striche\n *** execution finished \n"
2944	fi
2945
2946
2947
2948	# EVENTUELLE OUTPUT-KOMMANDOS ABARBEITEN
2949	(( i = 0 ))
2950	while (( i < ioc ))
2951	do
2952	(( i = i + 1 ))
2953	if (( i == 1 ))
2954	then
2955	printf "\n\n *** execution of OUTPUT-commands:\n$striche"
2956	fi
2957	printf "\n >>> ${out_command[$i]}"
2958	eval ${out_command[$i]}
2959	if (( i == ioc ))
2960	then
2961	printf "\n$striche\n"
2962	fi
2963	done
2964
2965
2966	# EVTL. INHALT DES AKTUELLEN VERZEICHNISSES AUSGEBEN
2967	if [[ $do_trace = true ]]
2968	then
2969	printf "\n\n"
2970	ls -al
2971	fi
2972
2973
2974
2975	# OUTPUT-DATEIEN AN IHRE ZIELORTE KOPIEREN
2976	(( i = 0 ))
2977	while (( i < iout ))
2978	do
2979	(( i = i + 1 ))
2980	if (( i == 1 ))
2981	then
2982	printf "\n\n *** saving OUTPUT-files:\n$striche"
2983	fi
2984
2985	# PRUEFEN, OB EINZELDATEI ODER DATEI PRO PROZESSOR
2986	files_for_pes=false; filetyp=file
2987	if [[ "${actionout[$i]}" = pe && -n $numprocs ]]
2988	then
2989	files_for_pes=true; filetyp=directory
2990	actionout[$i]=""
2991	elif [[ "${actionout[$i]}" = pe && ! -n $numprocs ]]
2992	then
2993	actionout[$i]=""
2994	elif [[ "${actionout[$i]}" = arpe && -n $numprocs ]]
2995	then
2996	files_for_pes=true; filetyp=directory
2997	actionout[$i]="ar"
2998	elif [[ "${actionout[$i]}" = arpe && ! -n $numprocs ]]
2999	then
3000	actionout[$i]="ar"
3001	elif [[ "${actionout[$i]}" = flpe && -n $numprocs ]]
3002	then
3003	files_for_pes=true; filetyp=directory
3004	actionout[$i]="fl"
3005	elif [[ "${actionout[$i]}" = flpe && ! -n $numprocs ]]
3006	then
3007	actionout[$i]="fl"
3008	elif [[ "${actionout[$i]}" = trpe && -n $numprocs ]]
3009	then
3010	files_for_pes=true; filetyp=directory
3011	actionout[$i]="tr"
3012	elif [[ "${actionout[$i]}" = trpe && ! -n $numprocs ]]
3013	then
3014	actionout[$i]="tr"
3015	fi
3016
3017	if [[ ! -f ${localout[$i]} && $files_for_pes = false ]]
3018	then
3019	printf "\n +++ temporary OUTPUT-file ${localout[$i]} does not exist\n"
3020	elif [[ ! -f ${localout[$i]}/_0000 && $files_for_pes = true ]]
3021	then
3022	printf "\n +++ temporary OUTPUT-file ${localout[$i]}/.... does not exist\n"
3023	else
3024
3025
3026	# KOPIEREN PER FTP/SCP (IMMER IM BINAERMODUS, -M: FALLS ZIELKATALOG
3027	# NICHT VORHANDEN, WIRD VERSUCHT, IHN ANZULEGEN), ABER NUR BEI
3028	# REMOTE-RECHNUNGEN
3029	if [[ "${actionout[$i]}" = tr ]]
3030	then
3031	if [[ $localhost != $fromhost ]]
3032	then
3033	if [[ $files_for_pes = false ]]
3034	then
3035	cps=""
3036	cst=""
3037	else
3038	cps=-c
3039	cst="/"
3040	fi
3041	if [[ $localhost = ibmh \|\| $localhost = ibmb \|\| $localhost = nech ]]
3042	then
3043
3044	# TRANSFER IN EIGENSTAENDIGEM JOB
3045	# ZUERST KOPIE DER DATEI INS TEMPORAERE DATENVERZEICHNIS
3046	[[ ! -d $tmp_data_catalog/TRANSFER ]] && mkdir -p $tmp_data_catalog/TRANSFER
3047	file_to_transfer=${fname}_${localout[$i]}_to_transfer_$kennung
3048	if [[ $files_for_pes = false ]]
3049	then
3050	ln -f ${localout[$i]} $tmp_data_catalog/TRANSFER/$file_to_transfer
3051	else
3052	mkdir $tmp_data_catalog/TRANSFER/$file_to_transfer
3053	ln ${localout[$i]}/* $tmp_data_catalog/TRANSFER/$file_to_transfer
3054	fi
3055
3056	echo "set -x" > transfer_${localout[$i]}
3057	echo "cd $tmp_data_catalog/TRANSFER" >> transfer_${localout[$i]}
3058	if [[ $filetransfer_protocol = ftp ]]
3059	then
3060	if [[ $files_for_pes = true ]]
3061	then
3062	printf "\n +++ WARNING: no transfer of catalogs via ftpcopy\n"
3063	fi
3064	printf "\n >>> OUTPUT: ${localout[$i]} by FTP in seperate job to"
3065	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}"
3066	printf "\n or higher cycle\n"
3067	echo "ftpcopy -b -m $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
3068	else
3069	printf "\n >>> OUTPUT: ${localout[$i]}$cst by SCP in seperate job to"
3070	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}$cst"
3071	printf "\n or higher cycle\n"
3072	echo "batch_scp $cps -b -m -u $return_username $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
3073	fi
3074	echo "[[ \$? = 0 ]] && rm $file_to_transfer" >> transfer_${localout[$i]}
3075
3076	if [[ $localhost = nech ]]
3077	then
3078	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 900 -f $filetransfer_protocol transfer_${localout[$i]}
3079	else
3080	if [[ "$LOGNAME" = b323013 ]]
3081	then
3082	subjob -v -q c1 -X 0 -m 1000 -t 900 -f $filetransfer_protocol transfer_${localout[$i]}
3083	else
3084	subjob -d -v -q c1 -X 0 -m 1000 -t 900 -f $filetransfer_protocol transfer_${localout[$i]}
3085	fi
3086	fi
3087
3088	else
3089
3090	# TRANSFER INNERHALB DIESES JOBS
3091	transfer_failed=false
3092	if [[ $filetransfer_protocol = ftp ]]
3093	then
3094	if [[ $files_for_pes = true ]]
3095	then
3096	printf "\n +++ WARNING: no transfer of catalogs via ftpcopy\n"
3097	fi
3098	printf "\n >>> OUTPUT: ${localout[$i]} by FTP to"
3099	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}\n"
3100	ftpcopy -b -m $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
3101	[[ $? != 0 ]] && transfer_failed=true
3102	else
3103	printf "\n >>> OUTPUT: ${localout[$i]}$cst by SCP to"
3104	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}$cst\n"
3105	batch_scp $cps -b -m -u $return_username $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
3106	[[ $? != 0 ]] && transfer_failed=true
3107	fi
3108
3109	# BEI FEHLGESCHLAGENEM TRANSFER SICHERUNGSKOPIE AUF
3110	# LOKALER MASCHINE ANLEGEN
3111	if [[ $transfer_failed = true ]]
3112	then
3113	printf " +++ transfer failed. Trying to save a copy on the local host under:\n"
3114	printf " ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung\n"
3115
3116	# ERSTMAL PRUEFEN, OB VERZEICHNIS EXISTIERT. GEGEBENENFALLS
3117	# ANLEGEN.
3118	eval local_catalog=${pathout[$i]}
3119	if [[ ! -d $local_catalog ]]
3120	then
3121	printf " *** local directory does not exist. Trying to create:\n"
3122	printf " $local_catalog \n"
3123	mkdir -p $local_catalog
3124	fi
3125	eval cp ${localout[$i]} ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung
3126	transfer_problems=true
3127	fi
3128	fi
3129	else
3130
3131	# WERTZUWEISUNG, SO DASS WEITER UNTEN NUR KOPIERT WIRD
3132	actionout[$i]=""
3133	fi
3134	fi
3135
3136
3137	# APPEND PER FTP/SCP (IMMER IM BINAERMODUS, -M: FALLS ZIELKATALOG
3138	# NICHT VORHANDEN, WIRD VERSUCHT, IHN ANZULEGEN), ABER NUR BEI
3139	# REMOTE-RECHNUNGEN
3140	if [[ "${actionout[$i]}" = tra ]]
3141	then
3142	if [[ $localhost != $fromhost ]]
3143	then
3144	if [[ $localhost = ibmh \|\| $localhost = ibmb \|\| $localhost = nech ]]
3145	then
3146
3147	# TRANSFER IN EIGENSTAENDIGEM JOB
3148	# ZUERST KOPIE DER DATEI INS TEMPORAERE DATENVERZEICHNIS
3149	[[ ! -d $tmp_data_catalog/TRANSFER ]] && mkdir -p $tmp_data_catalog/TRANSFER
3150	file_to_transfer=${fname}_${localout[$i]}_to_transfer_$kennung
3151	ln -f ${localout[$i]} $tmp_data_catalog/TRANSFER/$file_to_transfer
3152
3153	echo "set -x" > transfer_${localout[$i]}
3154	echo "cd $tmp_data_catalog/TRANSFER" >> transfer_${localout[$i]}
3155	if [[ $filetransfer_protocol = ftp ]]
3156	then
3157	printf "\n >>> OUTPUT: ${localout[$i]} append by FTP in seperate job to"
3158	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}"
3159	printf "\n or higher cycle\n"
3160	echo "ftpcopy -A -b -m $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
3161	else
3162	printf "\n >>> OUTPUT: ${localout[$i]} append by SCP in seperate job to"
3163	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}"
3164	printf "\n or higher cycle\n"
3165	echo "batch_scp -A -b -m -u $return_username $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
3166	fi
3167	echo "[[ \$? = 0 ]] && rm $file_to_transfer" >> transfer_${localout[$i]}
3168
3169	if [[ $localhost = nech ]]
3170	then
3171	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 900 -f $filetransfer_protocol transfer_${localout[$i]}
3172	else
3173	if [[ $LOGNAME = b323013 ]]
3174	then
3175	subjob -v -q c1 -X 0 -m 1000 -t 900 -f $filetransfer_protocol transfer_${localout[$i]}
3176	else
3177	subjob -d -v -q c1 -X 0 -m 1000 -t 900 -f $filetransfer_protocol transfer_${localout[$i]}
3178	fi
3179	fi
3180
3181	else
3182
3183	# TRANSFER INNERHALB DIESES JOBS
3184	transfer_failed=false
3185	if [[ $filetransfer_protocol = ftp ]]
3186	then
3187	printf "\n >>> OUTPUT: ${localout[$i]} append by FTP to"
3188	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}\n"
3189	ftpcopy -A -b -m $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
3190	[[ $? != 0 ]] && transfer_failed=true
3191	else
3192	printf "\n >>> OUTPUT: ${localout[$i]} append by SCP to"
3193	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}\n"
3194	batch_scp -A -b -m -u $return_username $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
3195	[[ $? != 0 ]] && transfer_failed=true
3196	fi
3197
3198	# BEI FEHLGESCHLAGENEM TRANSFER SICHERUNGSKOPIE AUF
3199	# LOKALER MASCHINE ANLEGEN
3200	if [[ $transfer_failed = true ]]
3201	then
3202	printf " +++ transfer failed. Trying to save a copy on the local host under:\n"
3203	printf " ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung\n"
3204
3205	# ERSTMAL PRUEFEN, OB VERZEICHNIS EXISTIERT. GEGEBENENFALLS
3206	# ANLEGEN
3207	eval local_catalog=${pathout[$i]}
3208	if [[ ! -d $local_catalog ]]
3209	then
3210	printf " *** local directory does not exist. Trying to create:\n"
3211	printf " $local_catalog \n"
3212	mkdir -p $local_catalog
3213	fi
3214
3215	eval cp ${localout[$i]} ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung
3216	transfer_problems=true
3217	fi
3218	fi
3219	else
3220
3221	# WERTZUWEISUNG, SO DASS WEITER UNTEN NUR APPEND AUF
3222	# LOKALER MASCHINE DURCHGEFUEHRT WIRD
3223	actionout[$i]=a
3224	fi
3225	fi
3226
3227
3228	# OUTPUT-DATEI FUER EINEN FORTSETZUNGSLAUF. DATEI WIRD PER
3229	# LINK AUF DEN TEMPORAEREN DATENKATALOG GELEGT. OPTION -f WIRD
3230	# VERWENDET, FALLS DORT NOCH EINE DATEI GLEICHEN NAMENS VORHANDEN
3231	# SEIN SOLLTE. ANSCHLIESSEND WIRD SEINE ARCHIVIERUNG ANGESTOSSEN
3232	if [[ "${actionout[$i]}" = fl ]]
3233	then
3234	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
3235	chmod g+rx $tmp_data_catalog
3236	if [[ $files_for_pes = false ]]
3237	then
3238	printf "\n >>> OUTPUT: ${localout[$i]} to"
3239	printf "\n $tmp_data_catalog/${frelout[$i]} (temporary data catalog)\n"
3240	ln -f ${localout[$i]} $tmp_data_catalog/${frelout[$i]}
3241	else
3242	printf "\n >>> OUTPUT: ${localout[$i]}/.... to"
3243	printf "\n $tmp_data_catalog/${frelout[$i]} (temporary data catalog)\n"
3244	mkdir $tmp_data_catalog/${frelout[$i]}
3245	ln -f ${localout[$i]}/* $tmp_data_catalog/${frelout[$i]}
3246	fi
3247
3248
3249	# ARCHIVIERUNGSJOB WIRD ERZEUGT UND ABGESCHICKT
3250	if [[ $store_on_archive_system = true ]]
3251	then
3252
3253	if [[ $archive_system = asterix ]]
3254	then
3255	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3256	if [[ $files_for_pes = false ]]
3257	then
3258	echo "stageout ${frelout[$i]} > STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3259	else
3260	echo "stageout -t ${frelout[$i]} > STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3261	fi
3262	echo "cat STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3263	echo "if [[ \$(grep -c \"st.msg:150\" STAGE_OUTPUT${i}_$kennung) != 0 ]]" >> archive_${frelout[$i]}
3264	echo "then" >> archive_${frelout[$i]}
3265	echo " do_stageout=false" >> archive_${frelout[$i]}
3266	echo "else" >> archive_${frelout[$i]}
3267	echo " echo \" +++ $filetyp ${frelout[$i]} could not be stored on archive-system\" " >> archive_${frelout[$i]}
3268	echo " cat /dev/null > ~/job_queue/ARCHIVE_ERROR_$fname" >> archive_${frelout[$i]}
3269	echo " cat STAGE_OUTPUT${i}_$kennung > ~/job_queue/archive_${frelout[$i]}_error" >> archive_${frelout[$i]}
3270	echo " echo \" *** $filetyp ${frelout[$i]} will be copied to \$WORK as backup\" " >> archive_${frelout[$i]}
3271	if [[ $files_for_pes = false ]]
3272	then
3273	echo " cp ${frelout[$i]} \$WORK" >> archive_${frelout[$i]}
3274	else
3275	echo " cp -r ${frelout[$i]} \$WORK/${frelout[$i]}" >> archive_${frelout[$i]}
3276	fi
3277	echo " echo \" *** $filetyp ${frelout[$i]} saved\" " >> archive_${frelout[$i]}
3278	echo "fi" >> archive_${frelout[$i]}
3279	echo "rm STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3280	elif [[ $archive_system = DMF ]]
3281	then
3282	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3283	if [[ $files_for_pes = false ]]
3284	then
3285	printf "\n +++ archiving of single files impossible with $archive_system !\n"
3286	locat=DMF
3287	exit
3288	else
3289	# FUER RECHNER IN JUELICH. DORT KOENNTEN AUCH
3290	# EINZELNE DATEIEN GESICHERT WERDEN (SPAETER KORR.)
3291	echo "rm -rf \$ARCHIVE/${frelout[$i]}" >> archive_${frelout[$i]}
3292	echo "cp -r ${frelout[$i]} \$ARCHIVE" >> archive_${frelout[$i]}
3293	fi
3294	elif [[ $archive_system = tivoli ]]
3295	then
3296	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3297	if [[ $files_for_pes = false ]]
3298	then
3299	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3300	echo "set -x" >> archive_${frelout[$i]}
3301	echo "rm -rf \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3302	echo "cp ${frelout[$i]} \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3303	else
3304
3305	echo "set -x" >> archive_${frelout[$i]}
3306	echo "rm -rf \$PERM/${frelout[$i]}/*" >> archive_${frelout[$i]}
3307	echo "[[ ! -d \$PERM/${frelout[$i]} ]] && mkdir $PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3308	cd $tmp_data_catalog
3309	all_files=`ls -1 ${frelout[$i]}/*`
3310	cd - > /dev/null
3311	(( inode = 0 ))
3312	(( tp1 = tasks_per_node + 1 ))
3313	while (( inode < nodes ))
3314	do
3315	# echo "*** all_files = \"$all_files\" "
3316	files=`echo $all_files \| cut -d" " -f1-$tasks_per_node`
3317	all_files=`echo $all_files \| cut -d" " -f$tp1-`
3318	# echo "*** tasks_per_node = \"$tasks_per_node\" "
3319	# echo "*** files = \"$files\" "
3320	# echo "*** all_files = \"$all_files\" "
3321	echo "tar cvf \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar $files" >> archive_${frelout[$i]}
3322	echo "dsmc incremental \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar" >> archive_${frelout[$i]}
3323	echo "dsmmigrate \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar" >> archive_${frelout[$i]}
3324	(( inode = inode + 1 ))
3325	done
3326	# echo "rm -rf \$PERM/${frelout[$i]}.tar" >> archive_${frelout[$i]}
3327	# echo "tar cvf \$PERM/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
3328	fi
3329	elif [[ $archive_system = ut ]]
3330	then
3331	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3332	if [[ $files_for_pes = false ]]
3333	then
3334	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3335	echo "set -x" >> archive_${frelout[$i]}
3336	echo "rm -rf \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3337	echo "cp ${frelout[$i]} \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3338	else
3339
3340	echo "set -x" >> archive_${frelout[$i]}
3341	echo "rm -rf \$UT/${frelout[$i]}/*" >> archive_${frelout[$i]}
3342	echo "[[ ! -d \$UT/${frelout[$i]} ]] && mkdir $UT/${frelout[$i]}" >> archive_${frelout[$i]}
3343	cd $tmp_data_catalog
3344	all_files=`ls -1 ${frelout[$i]}/*`
3345	cd - > /dev/null
3346	(( inode = 0 ))
3347	(( tp1 = tasks_per_node + 1 ))
3348	while (( inode < nodes ))
3349	do
3350	files=`echo $all_files \| cut -d" " -f1-$tasks_per_node`
3351	all_files=`echo $all_files \| cut -d" " -f$tp1-`
3352	echo "tar cvf \$UT/${frelout[$i]}/${frelout[$i]}.node_$inode.tar $files" >> archive_${frelout[$i]}
3353	(( inode = inode + 1 ))
3354	done
3355	fi
3356	elif [[ $archive_system = none ]]
3357	then
3358	printf " +++ archiving on $localhost not available!\n"
3359	fi
3360
3361	if [[ $archive_system != none ]]
3362	then
3363	if [[ $localhost = ibmh \|\| $localhost = ibmb ]]
3364	then
3365	subjob -d -v -q cdata -X 0 -m 1000 -t 7200 -f $filetransfer_protocol archive_${frelout[$i]}
3366	elif [[ $localhost = nech ]]
3367	then
3368	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 7200 -f $filetransfer_protocol archive_${frelout[$i]}
3369	fi
3370	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
3371	fi
3372	else
3373	printf " +++ caution: option -A is switched on. No archiving on $archive_system!\n"
3374	fi
3375
3376
3377	# LEERDATEI IM BENUTZERVERZEICHNIS ANLEGEN, DAMIT BEKANNT IST,
3378	# WIE DIE HOECHSTE ZYKLUSNUMMER AUF DEM ARCHIV-SYSTEM LAUTET
3379	if [[ $files_for_pes = false ]]
3380	then
3381	cat /dev/null > ${pathout[$i]}
3382	else
3383	mkdir -p ${pathout[$i]}
3384	fi
3385
3386	fi
3387
3388
3389	# KOPIEREN AUF LOKALER MASCHINE ZUM ARCHIV-SYSTEM
3390	# AUSSERDEM MUSS LEERDATEI ANGELEGT WERDEN, DAMIT BEKANNT IST,
3391	# WIE DIE HOECHSTE ZYKLUSNUMMER AUF DEM ARCHIV-SYSTEM LAUTET
3392	# FALLS IRGENDEINE (VON MEHREREN) ARCHIVIERUNGEN SCHIEF GEHT,
3393	# WIRD FLAG GESETZT UND BLEIBT AUCH BEI WEITEREN ORDNUNGS-
3394	# GEMAESSEN ARCHIVIERUNGEN GESETZT
3395	if [[ "${actionout[$i]}" = ar ]]
3396	then
3397	if [[ $files_for_pes = false ]]
3398	then
3399	printf "\n >>> OUTPUT: ${localout[$i]} to"
3400	printf "\n ${pathout[$i]}"
3401	printf "\n File will be copied to archive-system ($archive_system) !\n"
3402	else
3403	printf "\n >>> OUTPUT: ${localout[$i]}/_.... to"
3404	printf "\n ${pathout[$i]}"
3405	printf "\n Directory will be copied to archive-system ($archive_system) !\n"
3406	fi
3407	mv ${localout[$i]} ${frelout[$i]}
3408
3409	file_saved=false
3410
3411	if [[ $archive_system = asterix ]]
3412	then
3413	do_stageout=true
3414	(( stageout_anz = 0 ))
3415	while [[ $do_stageout = true ]]
3416	do
3417	if [[ $files_for_pes = false ]]
3418	then
3419	stageout ${frelout[$i]} > STAGE_OUTPUT
3420	else
3421	stageout -t ${frelout[$i]} > STAGE_OUTPUT
3422	fi
3423	cat STAGE_OUTPUT
3424	if [[ $(grep -c "st.msg:150" STAGE_OUTPUT) != 0 ]]
3425	then
3426	file_saved=true
3427	do_stageout=false
3428	else
3429	if [[ $files_for_pes = false ]]
3430	then
3431	printf "\n +++ file ${frelout[$i]} could not be saved on archive-system"
3432	else
3433	printf "\n +++ directory ${frelout[$i]} could not be saved on archive-system"
3434	fi
3435	(( stageout_anz = stageout_anz + 1 ))
3436	if (( stageout_anz == 10 ))
3437	then
3438	printf "\n +++ stoped after 10 unsuccessful tries!"
3439	archive_save=false
3440	do_stageout=false
3441	else
3442	printf "\n *** new try to store on archive after 15 min:"
3443	sleep 900
3444	fi
3445	fi
3446	done
3447	elif [[ $archive_system = DMF ]]
3448	then
3449	if [[ $files_for_pes = false ]]
3450	then
3451	printf "\n +++ archiving of single files impossible on $archive_system!\n"
3452	locat=DMF
3453	exit
3454	else
3455	rm -rf $ARCHIVE/${frelout[$i]}
3456	cp -r ${frelout[$i]} $ARCHIVE
3457	fi
3458	file_saved=true
3459	elif [[ $archive_system = tivoli ]]
3460	then
3461	# ARCHIVIERUNG NUR PER BATCH-JOB MOEGLICH
3462	# DATEI MUSS ZWISCHENZEITLICH INS TEMPORAERE DATENVERZEICHNIS
3463	# GELEGT WERDEN
3464	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
3465	chmod g+rx $tmp_data_catalog
3466	if [[ $files_for_pes = false ]]
3467	then
3468	ln -f ${frelout[$i]} $tmp_data_catalog/${frelout[$i]}
3469	else
3470	mkdir $tmp_data_catalog/${frelout[$i]}
3471	ln -f ${frelout[$i]}/* $tmp_data_catalog/${frelout[$i]}
3472	fi
3473
3474	# BATCH JOB GENERIEREN UND ABSCHICKEN; DATEI MUSS WIEDER
3475	# AUS TEMPORAEREM DATENVERZEICHNIS ENTFERNT WERDEN
3476	echo "cd $tmp_data_catalog" > archive_${frelout[$i]}
3477	if [[ $files_for_pes = false ]]
3478	then
3479	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3480	echo "rm -rf \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3481	echo "cp ${frelout[$i]} \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3482	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3483	else
3484	echo "rm -rf \$PERM/${frelout[$i]}.tar" >> archive_${frelout[$i]}
3485	echo "tar cvf \$PERM/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
3486	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3487	fi
3488
3489	subjob -v -d -q cdata -X 0 -m 1000 -t 7200 -f $filetransfer_protocol archive_${frelout[$i]}
3490	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
3491	file_saved=true
3492
3493	elif [[ $archive_system = ut ]]
3494	then
3495	# ARCHIVIERUNG NUR PER BATCH-JOB MOEGLICH
3496	# DATEI MUSS ZWISCHENZEITLICH INS TEMPORAERE DATENVERZEICHNIS
3497	# GELEGT WERDEN
3498	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
3499	chmod g+rx $tmp_data_catalog
3500	if [[ $files_for_pes = false ]]
3501	then
3502	ln -f ${frelout[$i]} $tmp_data_catalog/${frelout[$i]}
3503	else
3504	mkdir $tmp_data_catalog/${frelout[$i]}
3505	ln -f ${frelout[$i]}/* $tmp_data_catalog/${frelout[$i]}
3506	fi
3507
3508	# BATCH JOB GENERIEREN UND ABSCHICKEN; DATEI MUSS WIEDER
3509	# AUS TEMPORAEREM DATENVERZEICHNIS ENTFERNT WERDEN
3510	echo "cd $tmp_data_catalog" > archive_${frelout[$i]}
3511	if [[ $files_for_pes = false ]]
3512	then
3513	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3514	echo "rm -rf \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3515	echo "cp ${frelout[$i]} \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3516	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3517	else
3518	echo "rm -rf \$UT/${frelout[$i]}.tar" >> archive_${frelout[$i]}
3519	echo "tar cvf \$UT/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
3520	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3521	fi
3522
3523	subjob -v -c /pf/b/$usern/job_queue -d -q pp -X 0 -m 1000 -t 7200 -f $filetransfer_protocol archive_${frelout[$i]}
3524	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
3525	file_saved=true
3526
3527	else
3528	printf "\n +++ archive_system=\"$archive_system\" archiving impossible!"
3529	archive_save=false
3530	fi
3531	if [[ $file_saved = true ]]
3532	then
3533	if [[ $files_for_pes = false ]]
3534	then
3535	cat /dev/null > ${pathout[$i]}
3536	else
3537	mkdir -p ${pathout[$i]}
3538	fi
3539	fi
3540	fi
3541
3542	# APPEND AUF LOKALER MASCHINE
3543	if [[ "${actionout[$i]}" = "a" ]]
3544	then
3545	printf "\n >>> OUTPUT: ${localout[$i]} append to ${pathout[$i]}\n"
3546	cat ${localout[$i]} >> ${pathout[$i]}
3547	fi
3548
3549	# KOPIEREN AUF LOKALER MASCHINE
3550	# ES MUSS KOPIERT WERDEN, DA MOVE NICHT UEBER FILESYSTEM HINAUS MOEGLICH
3551	if [[ "${actionout[$i]}" = "" && $files_for_pes = false ]]
3552	then
3553
3554	# KOPIEREN AUF EINPROZESSORMASCHINE
3555	if [[ "${extout[$i]}" != " " && "${extout[$i]}" != "" ]]
3556	then
3557	printf "\n >>> OUTPUT: ${localout[$i]} to ${pathout[$i]}.${extout[$i]}\n"
3558	cp ${localout[$i]} ${pathout[$i]}.${extout[$i]}
3559	else
3560	printf "\n >>> OUTPUT: ${localout[$i]} to ${pathout[$i]}\n"
3561	cp ${localout[$i]} ${pathout[$i]}
3562	fi
3563
3564	elif [[ "${actionout[$i]}" = "" && $files_for_pes = true ]]
3565	then
3566
3567	# DIE DEN PROZESSOREN EINES PARALLELRECHNERS ZUGEHOERIGEN
3568	# DATEIEN WERDEN ERST IN EINEM KATALOG GESAMMELT UND DIESER
3569	# WIRD DANN KOPIERT
3570	# PER MOVE UMBENANNT WERDEN
3571	printf "\n >>> OUTPUT: ${localout[$i]}/_.... to ${pathout[$i]}\n"
3572	cp -r ${localout[$i]} ${pathout[$i]}
3573
3574	fi
3575	fi
3576	done
3577	if (( i != 0 ))
3578	then
3579	if [[ $transfer_problems = true ]]
3580	then
3581	printf "\n$striche\n *** OUTPUT-files saved"
3582	printf "\n +++ WARNING: some data transfers failed! \n"
3583	else
3584	printf "\n$striche\n *** all OUTPUT-files saved \n"
3585	fi
3586	fi
3587
3588
3589	# EVENTUELL FOLGEJOB STARTEN
3590	# DATEI CONTINUE_RUN MUSS VOM BENUTZERPROGRAMM AUS ERZEUGT WERDEN
3591	if [[ -f CONTINUE_RUN ]]
3592	then
3593
3594	if [[ $archive_save = true ]]
3595	then
3596
3597	# ZUERST IN MRUN-AUFRUF OPTIONEN FUER FORTSETZUNGSLAUF, FUER
3598	# STILLES ABARBEITEN (OHNE INTERAKTIVE RUECKFAGEN) UND FUER
3599	# BATCH-BETRIEB (NUR WICHTIG, FALLS BATCH AUF LOKALER MASCHINE
3600	# DURCHGEFUEHRT WERDEN SOLL) EINFUEGEN, FALLS NICHT BEREITS VOR-
3601	# HANDEN
3602	[[ $(echo $mc \| grep -c "\-C") = 0 ]] && mc="$mc -C"
3603	[[ $(echo $mc \| grep -c "\-v") = 0 ]] && mc="$mc -v"
3604	[[ $(echo $mc \| grep -c "\-b") = 0 ]] && mc="$mc -b"
3605	if [[ $(echo $mc \| grep -c "#") != 0 ]]
3606	then
3607	mc=`echo $mc \| sed 's/#/f/g'`
3608	fi
3609
3610
3611	# JOB STARTEN
3612	printf "\n\n *** initiating restart-run on \"$return_addres\" using command:\n"
3613	echo " $mc"
3614	printf "\n$striche\n"
3615	if [[ $localhost != $fromhost ]]
3616	then
3617
3618	if [[ $localhost = nech \|\| $localhost = ibmb \|\| $localhost = ibmh \|\| $localhost = ibms \|\| $localhost = lctit ]]
3619	then
3620	echo "*** ssh will be used to initiate restart-runs!"
3621	echo " return_addres=\"$return_addres\" "
3622	echo " return_username=\"$return_username\" "
3623	if [[ $return_addres = 172.20.25.41 ]]
3624	then
3625	# WORKAROUND AUF SCIROCCO AM TIT
3626	print "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc " \| ssh $return_addres -l $return_username
3627	else
3628	ssh $return_addres -l $return_username "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc "
3629	fi
3630	else
3631	printf "\n +++ no restart mechanism available for host \"$localhost\" "
3632	locat=restart; exit
3633	fi
3634
3635	# WARTEN, DAMIT SICH RESTART JOB IN QUEUE EINREIHEN KANN, BEVOR
3636	# DER AKTUELLE JOB ENDET
3637	sleep 30
3638
3639	else
3640
3641	# BEI RECHNUNGEN AUF LOKALER MASCHINE KANN MRUN DIREKT AUFGE-
3642	# RUFEN WERDEN
3643	cd $LOCAL_PWD
3644	eval $mc # ' MUESSEN AUSGEWERTET WERDEN
3645	cd - > /dev/null
3646	fi
3647	printf "\n$striche\n *** restart-run initiated \n"
3648
3649
3650	# EVENTUELL INPUT-DATEIEN, DIE VON TEMPORAEREM DATENVERZEICHNIS
3651	# GEHOLT WORDEN SIND, LOESCHEN
3652	(( i = 0 ))
3653	while (( i < iin ))
3654	do
3655	(( i = i + 1 ))
3656	if [[ "${got_tmp[$i]}" = true && $keep_data_from_previous_run = false ]]
3657	then
3658	rm -r $tmp_data_catalog/${frelin[$i]}
3659	fi
3660	done
3661
3662	else
3663
3664	printf "\n +++ no restart-run possible, since errors occured"
3665	printf "\n during the archive process"
3666	fi
3667
3668	fi
3669
3670
3671
3672	# EVTL. EMAIL-BENACHRICHTIGUNG UEBER ABGESCHLOSSENEN LAUF
3673	if [[ "$email_notification" != "" ]]
3674	then
3675
3676	if [[ $localhost != $fromhost ]]
3677	then
3678	if [[ -f CONTINUE_RUN ]]
3679	then
3680	echo "PALM restart run necessary" > email_text
3681	echo "description header of actual run:" >> email_text
3682	cat CONTINUE_RUN >> email_text
3683	echo "mrun-command to restart:" >> email_text
3684	echo "$mc" >> email_text
3685	else
3686	echo "PALM run with base filename \"$fname\" on host \"$localhost\" finished" > email_text
3687	fi
3688	mail $email_notification < email_text
3689	printf "\n *** email notification sent to \"$email_notification\" "
3690	fi
3691	fi
3692
3693
3694
3695	# ALLE ARBEITEN BEENDET. TEMPORAERER KATALOG KANN GELOESCHT WERDEN
3696	cd $HOME
3697	[[ $delete_temporary_catalog = true ]] && rm -rf $TEMPDIR
3698
3699	else
3700
3701
3702	# FALLS AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL, WERDEN JETZT ENTSPRE-
3703	# CHENDE AKTIONEN DURCHGEFUEHRT
3704
3705	# MRUN-BEFEHL FUER REMOTE-MASCHINE ZUSAMMENSTELLEN
3706	mrun_com="$mrun_script_name -a $afname -c $config_file -d $fname -f $filetransfer_protocol -h $host -H $fromhost -m $memory -t $cpumax -q $queue -R $return_addres -U $return_username -u $remote_username"
3707	[[ "$cpp_opts" != "" ]] && mrun_com=${mrun_com}" -D \"$cpp_opts\""
3708	[[ $do_compile = true ]] && mrun_com=${mrun_com}" -s \"$source_list\""
3709	[[ "$input_list" != "" ]] && mrun_com=${mrun_com}" -i \"$input_list\""
3710	[[ $ignore_archive_error = true ]] && mrun_com=${mrun_com}" -I"
3711	[[ $keep_data_from_previous_run = true ]] && mrun_com=${mrun_com}" -k"
3712	[[ "$additional_conditions" != "" ]] && mrun_com=${mrun_com}" -K \"$additional_conditions\""
3713	# [[ "$makefile" != "$source_path/Makefile" ]] && mrun_com=${mrun_com}" -M \"$makefile\""
3714	[[ "$output_list" != "" ]] && mrun_com=${mrun_com}" -o \"$output_list\""
3715	[[ "$read_from_config" = false ]] && mrun_com=${mrun_com}" -S"
3716	[[ $do_trace = true ]] && mrun_com=${mrun_com}" -x"
3717	[[ "$numprocs" != "" ]] && mrun_com=${mrun_com}" -X $numprocs"
3718	if [[ $use_openmp = true ]]
3719	then
3720	mrun_com=${mrun_com}" -O"
3721	[[ "$tasks_per_node" != "" ]] && mrun_com=${mrun_com}" -T $threads_per_task"
3722	else
3723	[[ "$tasks_per_node" != "" ]] && mrun_com=${mrun_com}" -T $tasks_per_node"
3724	fi
3725	[[ $store_on_archive_system = false ]] && mrun_com=${mrun_com}" -A"
3726	[[ $package_list != "" ]] && mrun_com=${mrun_com}" -p \"$package_list\""
3727	[[ $return_password != "" ]] && mrun_com=${mrun_com}" -P $return_password"
3728	[[ $delete_temporary_catalog = false ]] && mrun_com=${mrun_com}" -B"
3729	[[ $node_usage != default ]] && mrun_com=${mrun_com}" -n $node_usage"
3730	if [[ $do_remote = true ]]
3731	then
3732	printf "\n>>>> MRUN-command on execution host:\n>>>> $mrun_com \n"
3733	fi
3734
3735
3736	# ZUSAMMENSTELLUNG DES JOBSCRIPTS AUF DATEI jobfile
3737	jobfile=jobfile.$RANDOM
3738
3739
3740	# TEMPORAERES VERZEICHNIS GENERIEREN UND NACH DORT WECHSELN
3741	echo "mkdir $TEMPDIR" >> $jobfile
3742	echo "cd $TEMPDIR" >> $jobfile
3743
3744
3745	# EVENTUELL FEHLERVERFOLGUNG AKTIVIEREN
3746	if [[ $do_trace = true ]]
3747	then
3748	echo "set -x" >> $jobfile
3749	else
3750	echo "set +vx" >> $jobfile
3751	fi
3752
3753
3754	# ABSPEICHERN DER QUELLTEXTE (NUR FALLS UEBERSETZT WERDEN SOLL)
3755	# SOWIE GEGEBENENFALLS DES MAKEFILES
3756	if [[ $do_compile = true ]]
3757	then
3758
3759	source_catalog=SOURCES_FOR_RUN_$fname
3760
3761	# UNTERVERZEICHNIS FUER QUELLTEXTE UND MAKEFILE ANLEGEN
3762	# MRUN WIRD DIESES VRZEICHNIS UEBER ENVIRONMENT VARIABLE
3763	# MITGETEILT (UEBERSTEUERT ANGABE IN KONFIGURATIONSDATEI)
3764	echo "mkdir SOURCES_FOR_RUN_$fname" >> $jobfile
3765	echo "export SOURCES_COMPLETE=true" >> $jobfile
3766	echo "cd SOURCES_FOR_RUN_$fname" >> $jobfile
3767
3768	for filename in $source_list
3769	do
3770	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
3771	echo "cat > $filename << \"%END%\"" >> $jobfile
3772	cat $source_catalog/$filename >> $jobfile
3773	echo " " >> $jobfile
3774	echo "%END%" >> $jobfile
3775	echo " " >> $jobfile
3776	done
3777
3778	if [[ "$use_makefile" = true ]]
3779	then
3780	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
3781	echo "cat > Makefile << \"%END%\"" >> $jobfile
3782	cat $source_catalog/Makefile >> $jobfile
3783	echo " " >> $jobfile
3784	echo "%END%" >> $jobfile
3785	echo " " >> $jobfile
3786	fi
3787
3788	echo "cd - > /dev/null" >> $jobfile
3789
3790	fi
3791
3792
3793	# ABSPEICHERN DER KONFIGURATIONSDATEI
3794	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
3795	echo "cat > $config_file << \"%END%\"" >> $jobfile
3796	cat $config_file >> $jobfile
3797	echo "%END%" >> $jobfile
3798	echo " " >> $jobfile
3799
3800
3801	# ABSPEICHERN DER AKTUELLEN MRUN-VERSION
3802	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
3803	echo "cat > $mrun_script_name <<\"%END%\"" >> $jobfile
3804	cat ${PALM_BIN}/$mrun_script_name >> $jobfile
3805	echo "%END%" >> $jobfile
3806	if [[ $host = lctit ]]
3807	then
3808	echo "sed 's/bin\/ksh/home2\/usr5\/mkanda\/pub\/ksh/' < $mrun_script_name > mrun_new" >> $jobfile
3809	echo "mv mrun_new $mrun_script_name" >> $jobfile
3810	fi
3811	echo "chmod u+x $mrun_script_name" >> $jobfile
3812	echo "execute_mrun=true" >> $jobfile
3813	echo " " >> $jobfile
3814
3815	# EVTL. BENOETIGTE INPUT-DATEIEN PER FTP HOLEN ODER DEM JOB DIREKT
3816	# MITGEBEN UND AUF DEM REMOTE-RECHNER IM BENUTZERVERZEICHNIS ABLEGEN
3817	# FALLS DIESES NICHT EXISTIERT, WIRD VERSUCHT, DAS JEWEILS LETZTE
3818	# UNTERVERZEICHNIS DES PFADNAMENS ANZULEGEN
3819	if [[ $do_remote = true ]]
3820	then
3821	(( i = 0 ))
3822	while (( i < iin ))
3823	do
3824	(( i = i + 1 ))
3825	echo "[[ ! -d ${pathin[$i]} ]] && mkdir -p ${pathin[$i]}" >> $jobfile
3826	if [[ "${transin[$i]}" = job ]]
3827	then
3828	echo "cat > ${remotepathin[$i]} <<\"%END%\"" >> $jobfile
3829	eval cat ${pathin[$i]}/${frelin[$i]} >> $jobfile
3830	echo " " >> $jobfile
3831	echo "%END%" >> $jobfile
3832	else
3833	if [[ $filetransfer_protocol = ftp ]]
3834	then
3835	echo "ftpcopy -b -o -g -s $return_addres ${remotepathin[$i]} \"${pathin[$i]}\" ${frelin[$i]}" >> $jobfile
3836	else
3837	echo "batch_scp -b -o -g -s -u $return_username $return_addres ${remotepathin[$i]} \"${pathin[$i]}\" ${frelin[$i]}" >> $jobfile
3838	fi
3839	fi
3840
3841	# UEBERPRUEFEN, OB DATEI ANGELEGT WERDEN KONNTE
3842	echo "if [[ \$? = 1 ]]" >> $jobfile
3843	echo "then" >> $jobfile
3844	echo " echo \" \" " >> $jobfile
3845	echo " echo \"+++ file ${remotepathin[$i]} could not be created\" " >> $jobfile
3846	echo " echo \" please check, if directory exists on $host!\" " >> $jobfile
3847	echo " echo \"+++ MRUN will not be continued\" " >> $jobfile
3848	echo " execute_mrun=false" >> $jobfile
3849	echo "fi" >> $jobfile
3850	done
3851	fi
3852
3853	# ARBEITSKATALOG AUF DER LOKALEN MASCHINE FUER EVENTUELLE
3854	# FORTSETZUNGSLAUEFE PER ENV-VARIABLE UEBERGEBEN
3855	echo "LOCAL_PWD=$working_directory" >> $jobfile
3856	echo "export LOCAL_PWD" >> $jobfile
3857
3858	# EBENSO LOKALEN MRUN-KATALOG UEBERGEBEN
3859	echo "LOCAL_MRUN_PATH=$PALM_BIN" >> $jobfile
3860	echo "export LOCAL_MRUN_PATH" >> $jobfile
3861
3862	# WORKAROUND FUER RIAM-NEC-JOBS WEGEN PROFILE-SCHWIERIGKEITEN
3863	if [[ $localhost_realname = "gate" ]]
3864	then
3865	echo "export PALM_BIN=$PALM_BIN" >> $jobfile
3866	fi
3867
3868	# MRUN AUF ZIELRECHNER AUFRUFEN
3869	echo "set -x" >> $jobfile
3870	echo "[[ \$execute_mrun = true ]] && ./$mrun_com" >> $jobfile
3871
3872	echo 'ls -al; echo `pwd`' >> $jobfile
3873	echo "cd \$HOME" >> $jobfile
3874	echo "rm -rf $TEMPDIR" >> $jobfile
3875
3876
3877
3878
3879	# JOB PER SUBJOB STARTEN
3880	if [[ $silent = false ]]
3881	then
3882	printf "\n "
3883	else
3884	printf "\n\n"
3885	fi
3886
3887	subjob $job_on_file -h $host -u $remote_username -q $queue -m $memory -N $node_usage -t $cpumax $XOPT $TOPT $OOPT -n $fname -f $filetransfer_protocol -v $jobfile
3888	rm -rf $jobfile
3889
3890
3891	fi # ENDE REMOTE-TEIL
3892
3893
3894
3895	# ENDE DER PROZEDUR

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