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source: palm/trunk/SCRIPTS/mrun @ 352

Last change on this file since 352 was 352, checked in by raasch, 15 years ago
+option -e in subjob
Property svn:keywords set to `Id Rev`
File size: 164.3 KB

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1	#!/bin/ksh
2	# mrun - Plot-Shellskript
3	# $Id: mrun 352 2009-07-08 16:26:02Z raasch $
4
5	# Prozedur zum Starten von Modellaeufen
6
7	# letzte Aenderung:
8	# 03/03/94 - Siggi - Entwicklungsbeginn
9	# 21/03/94 - Siggi - Entwicklungsabschluss (Version 1.0)
10	# 09/12/94 - Siggi - allexport unterbunden; statt dessen werden jetzt ein-
11	# zelne Variable exportiert. Dies ist noetig, weil an-
12	# sonsten irgendein Speicher ueberlaeuft und von mrun
13	# aufgerufene Programme (z.B. stageout) mit Fehlern
14	# abbrechen (too many arguments)
15	# 20/06/95 - Siggi - noclobber muss explizit abgeschaltet, da jetzt
16	# defaultmaessig im RRZN-Profile eingeschaltet
17	# 10/06/97 - Siggi - Zusaetzliche Option -C bei cpp, damit // nicht
18	# wegfallen
19	# 25/04/00 - Siggi - Version 1.5
20	# remote_addres und remote_user in return_addres bzw.
21	# return_username umbenannt, return_username wird dem
22	# mrun-Aufruf im Job ueber Option -U mitgegeben.
23	# Neue Variable remote_username, die beim interaktiven
24	# mrun-Aufruf zwingend ueber die neue Option -u oder
25	# in der Konfigurationsdatei angegeben werden muss.
26	# 08/02/01 - Siggi - Alle mrun-Meldungen ins englische uebersetzt,
27	# Version 1.7
28	# 05/05/02 - Siggi - Uebersetzungen mittels make-Mechanismus moeglich
29	# 21/11/02 - Siggi - ENV-Variable XLFRTEOPTS wird vor Ausfuehrung auf
30	# IBM gesetzt, um Record-Laenge der NAMELIST-Dateien,
31	# zu bestimmen; Praeprozessoroptionen haben nun alle
32	# die Form -Dtext=text, weil auf IBM sonst text durch
33	# die leere Zeichenkette ersetzt wird
34	# 01/08/03 - Siggi - Test of implementing dvrp+1PE on ibm
35	# 07/01/04 - Siggi - additional preprocessor directive for ibm included
36	# (-D$OMP=OMP) in order to avoid problems with
37	# OMP_NUM_THREADS
38	# 04/01/05 - Siggi - archiving on hanni and berni is done in separate
39	# tar files, one for each node used
40	# 07/01/04 - Siggi - old code for t3e, vpp and hpcs eliminated
41	# 09/01/05 - Siggi - workaround for getting the IP address on gfdl3
42	# 17/01/05 - Siggi - job for data transfer to local machine now within
43	# job class c1 (HLRN)
44	# 27/01/05 - Siggi - IP address workaround for gfdl3 removed
45	# 28/01/05 - Siggi - tar-filenames on $PERM (HLRN) now include the
46	# base filename and cycle number
47	# 16/02/05 - Gerald - hababai validated
48	# 14/03/05 - Siggi - abort on NEC after first runtime error (F_ERRCNT)
49	# 29/03/05 - Marcus - berni*-en0 validated
50	# 21/04/05 - Siggi - transfer-job-protocol for avs-data is no more stored
51	# 24/04/05 - Siggi - netcdf support on lcmuk
52	# 25/04/05 - Siggi - netcdf support on gfld3 (decalpha)
53	# 11/05/05 - Siggi - files with non-numeric extensions (.xxx after cycle
54	# number) can now be used within interactive runs
55	# 12/05/05 - Siggi - netcdf support on ibm
56	# 13/05/05 - Siggi - error in tar-filenames on $PERM (HLRN) removed
57	# 18/05/05 - Siggi - netcdf support on nec
58	# 24/05/05 - Siggi - netcdf support on ibms
59	# 14/06/05 - Siggi - sleep interval after submit of restart job increased
60	# to 30 seconds
61	# 28/06/05 - Siggi - bora adjusted to new intel compiler (LD_LIBRARY_
62	# PATH is temporarily set)
63	# 07/09/05 - Siggi - setting of MP_EAGER_LIMIT switched off because it
64	# caused warnings in the job protocol
65	# 20/10/05 - Siggi - update of netcdf-version on decalpha (gfdl3)
66	# 25/10/05 - Siggi - error in listing files for getting the cycle number
67	# removed
68	# 26/10/05 - Siggi - new paths for dvrp-library, transfer of catalogs
69	# realized by file attribute trpe
70	# 28/10/05 - Siggi - if existing, the file extension is output in case
71	# of missing input file - no job abort in case of
72	# missing input files with file extensions
73	# (preliminary solution)
74	# 31/10/05 - Siggi - data transfer from nech now within seperate job
75	# 04/11/05 - Siggi - netcdf 3.6.0-p1 on ibmh/ibmb
76	# 07/12/05 - Siggi - gallego and elephanta admitted
77	# 30/12/05 - Siggi - gfdl5 (ibmy) admitted
78	# 10/01/06 - Siggi - cpp directive for NetCDF 64bit support
79	# 20/01/06 - Siggi - cpp directive for ibmy
80	# 09/02/06 - Siggi - ibmy admitted for batch mode
81	# 13/04/06 - Siggi - ostria admitted
82	# 18/04/06 - Siggi - usage of OpenMP implemented (additional option -O)
83	# 10/05/06 - Siggi - environment variable XLSMPOPTS set on IBM for
84	# optimization of OpenMP runs (option stacksize is
85	# necessary for large gridpoint numbers because
86	# otherwise a segmentation fault occurs)
87	# 23/05/05 - Siggi - lctit (SUN Fire X4600) admitted
88	# 21/08/06 - Siggi - standard mrun path on scirocco is as on bora
89	# 23/08/06 - Siggi - netcdf support for scirocco (notebook)
90	# 20/09/06 - Marcus - add DVRP library on nech
91	# 24/10/06 - Siggi - Environment variables for PALM steering are written
92	# on local NAMELIST file ENVPAR
93	# 24/11/06 - Siggi - levanto admitted, maestro switched to ifc 9.1
94	# 28/11/06 - Siggi - call to interpret_config.x_levanto because of SuSe 10
95	# 06/02/07 - Siggi - add DVRP library on lcmuk
96	# 07/02/07 - Siggi - revision of source code handling, source code is
97	# now expected in directory given by source_path and
98	# not in the current working directory, source code
99	# files provided in add_source_path are allways
100	# compiled, source code to be compiled is allways
101	# sampled in SOURCES_FOR_RUN_$fname which is a
102	# subdirectory of the current working directory,
103	# -s TEST changed to -s WRITE_PERMIT or -s WP,
104	# adapted for RIAM (neck)
105	# bugfix for cycle number of output file (extout)
106	# all hpmuk-related code removed
107	# 14/02/07 - Siggi - dvrp support for neck added
108	# 28/02/07 - Siggi - empty lines in configuration file are accepted
109	# mrun_path replaced by PALM_BIN,
110	# all machines are calling interpret_config.x
111	# 14/03/07 - Siggi - fimm admitted, revision number added to terminal
112	# output
113	# 16/03/07 - Siggi - adjustments for lctit
114	# 29/03/07 - Siggi - global revision transfered to batch job by new
115	# option -G
116	# 30/03/07 - Siggi - compilation "by hand" removed, cpp-directives/options
117	# + netcdf/dvrp-options are read from configuration
118	# file, host identifier (local_host) is read from
119	# config file, code related to ftp filetransfer
120	# removed (incl. option -f)
121	# 19/06/07 - Siggi - time limit for cdata jobs increased
122	# 25/07/07 - Siggi - two sets of executables can be started on lcmuk,
123	# if new option -Y (coupling) is given,
124	# output of executables to aout_output removed,
125	# messages are immediately written to stdout instead
126	# 03/08/07 - Marcus - add XOPT="-X $numprocs" for lcfimm
127	# 09/08/07 - Marcus - workaround on lcfimm to propagate environment
128	# variables out to the nodes in coupled mode -disabled-
129	# 13/08/07 - Marcus - start local restart jobs per ssh on lcfimm
130	# 28/08/07 - Marcus - completely remove workaround on lcfimm to propagate
131	# environment variables out to the nodes in coupled mode
132	# 15/10/07 - Siggi - Preliminary adjustments for lctit, based on Jin's
133	# suggestions
134	# 19/10/07 - Marcus - further adjustments for lctit: add new optional
135	# argument -g group_number, admit all sla* node_usage
136	# queues
137	# 30/10/07 - Marcus - further adjustments for queues on lctit
138	# 14/02/08 - Bjoern - link of restart files with long file name possible
139	# 28/02/08 - Marcus - If environment variable link_local_output is set to
140	# true, mrun tries "ln -f" on local output and resorts
141	# to "cp" or "cp -r" on error
142	# 15/04/08 - Siggi - argument -c introduced to most of the subjob calls,
143	# which allows the user to choose his own job catalog
144	# by setting job_catalog in the configuration file
145	# (default is ~/job_queue),
146	# workaround for mpiexec with -env option,
147	# adjustments for lcxt4 (Bergen Center for Computational
148	# Science)
149	# 22/05/08 - Marcus - If environment variable link_local_input is set to
150	# true, mrun tries "ln -f" on local input and resorts
151	# to "cp" or "cp -r" on error
152	# 27/05/08 - Siggi - PATH is set to PALM_BIN everywhere (missing so far)
153	# 14/07/08 - Siggi - adjustments for lcsgih
154	# 08/08/08 - Marcus - typo removed in lcxt4 branch
155	# 17/09/08 - Siggi - restart mechanism adjusted for lcsgi
156	# 02/10/08 - BjornM - argument "-Y" modified, adjustments for coupled runs
157	# 21/10/08 - Siggi - bugfix for the case that -K has more than one
158	# argument
159	# 08/11/08 - Siggi - bugfix for depository path settings in configuration
160	# file
161	# 11/11/08 - Siggi - rules for using user code files changed: user
162	# code splitted into one file per subroutine,
163	# user can provide his/her own makefile, only
164	# default source-code filenames are allowed
165	# 14/11/08 - Siggi - cond1 and cond2 are part of the depository name
166	# 08/01/09 - Siggi - mpi module on sgi machines to be used can be set
167	# with environment variable mpilib
168	# 13/01/09 - Siggi - totalview on hice/bice can be used in debug mode
169	# using environment variable totalview
170	# 25/02/09 - Siggi - cputime-option (-t) is allowed to be omitted for
171	# interactive runs
172	# 05/03/09 - Siggi - adjustments for new NEC-SX9 at RIAM (necriam)
173	# 16/03/09 - Siggi - dvrp_lib, dvrp_inc replaced by dvr_lib, dvr_inc,
174	# dvr streaming server is automatically started using
175	# new variable dvr_server and a configuration file
176	# .dvrserver.config,
177	# processing of dvr output files using new script
178	# process_dvr_output implemented, in order to make
179	# dvr application more user friendly
180	# 20/03/09 - Marcus - update of n1ge command for lctit
181	# 16/04/09 - Siggi - new option -y for precursor (uncoupled) ocean runs
182	# to be followed by a coupled atmosphere-ocean run
183	# 21/04/09 - Siggi - adjustments for new IBM at DKRZ, which is now ibmh
184	# 24/06/09 - BjornM - adjustments for coupled/precursor runs on ibmy
185	# 08/07/09 - Siggi - default value for email_notification is none,
186	# option -e added to subjob
187
188
189	# VARIABLENVEREINBARUNGEN + DEFAULTWERTE
190
191	set +o allexport # SICHERHEITSHALBER UNTERBINDEN, DA SONST EVTL. STAGEOUT
192	# NICHT LAUEFT (TOO MANY ARGUMENTS - PROBLEM)
193	set +o noclobber # EXISTIERENDE DATEIEN DUERFEN UEBERSCHRIEBEN WERDEN
194
195	AddFilenames=""
196	additional_conditions=""
197	add_source_path=""
198	afname=""
199	archive_save=true
200	archive_system=none
201	compiler_name=""
202	cond1=""
203	cond2=""
204	config_file=.mrun.config
205	coupled_dist=""
206	coupled_mode="mpi1"
207	cpp_opts=""
208	cpp_options=""
209	cpumax=0
210	cpurest=0
211	delete_temporary_catalog=true
212	do_batch=false
213	do_compile=true
214	do_remote=false
215	do_stagein=true
216	do_stageout=true
217	do_trace=false
218	email_notification="none"
219	exclude=""
220	executable=""
221	execution_error=false
222	fimm=false
223	fname=test
224	fromhost=""
225	global_revision=""
226	group_number=none
227	host=""
228	host_file=""
229	hp=""
230	ignore_archive_error=false
231	input_list=""
232	interpreted_config_file=""
233	job_catalog="~/job_queue"
234	job_on_file=""
235	keep_data_from_previous_run=false
236	link_local_input=false
237	link_local_output=false
238	localhost_realname=$(hostname)
239	local_compile=false
240	local_dvrserver_running=.FALSE.
241	locat=normal
242	mainprog=""
243	makefile=""
244	mc=$0
245	while [[ $(echo $mc \| grep -c "/") != 0 ]]
246	do
247	mc=`echo $mc \| cut -f2- -d"/"`
248	done
249	module_files=""
250	mrun_script_name=$mc
251	netcdf_inc=""
252	netcdf_lib=""
253	netcdf_support=false
254	node_usage=default
255	numprocs=""
256	numprocs_atmos=0
257	numprocs_ocean=0
258	OOPT=""
259	openmp=false
260	output_list=""
261	package_list=""
262	punkte="..........................................................."
263	queue=none
264	read_from_config=""
265	restart_run=false
266	return_addres=$(nslookup `hostname` 2>&1 \| grep "Address:" \| tail -1 \| awk '{print $2}')
267	if [[ $return_addres = 130.75.105.158 ]]
268	then
269	return_addres=172.20.25.41
270	echo "+++ WARNING: return_addres changed to $return_addres !!!!!"
271	fi
272	return_password=""
273	return_username=$LOGNAME
274	remotecall=false
275	remote_username=""
276	run_coupled_model=false
277	run_mode=""
278	scirocco=false
279	store_on_archive_system=true
280	striche=" ----------------------------------------------------------------------------"
281	silent=false
282	source_list=""
283	source_path=SOURCE
284	tasks_per_node=""
285	threads_per_task=1
286	tmpcreate=false
287	tmp_data_catalog=""
288	transfer_problems=false
289	usern=$LOGNAME
290	working_directory=`pwd`
291	TOPT=""
292	XOPT=""
293	zeit=$( date \| cut -c 12-19 )
294
295	typeset -i iec=0 iic=0 iin=0 ioc=0 iout=0 memory=0 stagein_anz=0 stageout_anz=0
296	typeset -i cputime i ii iia iii iio icycle inode ival jobges jobsek maxcycle minuten nodes pes sekunden tp1
297
298	typeset -R30 calltime
299	typeset -L20 spalte1
300	typeset -L40 spalte2
301	typeset -L60 spalte3
302	typeset -L35 string1=`date`
303	typeset -L12 string2=$usern
304	typeset -L12 string3=$localhost_realname
305	typeset -L12 string4
306	typeset -L12 string5
307	typeset -L30 version="MRUN 2.0 Rev$Rev: 352 $"
308
309
310
311	# EINZELNE VARIABLE FUER HAUPTPROGRAMM EXPORTIEREN
312	export cpurest fname host localhost return_addres return_username remotecall tasks_per_node
313
314	# FOLGENDE VARIABLEN MUESSEN FUER DIE INTERPRETATION DER KONFIGURATIONSDATEI
315	# EXPORTIERT WERDEN
316	export afname config_file cpp_opts cpumax do_batch do_trace fname fromhost
317	export group_number input_list memory numprocs output_list queue run_mode
318
319
320
321	# FEHLERBEHANDLUNG
322	# BEI EXIT:
323	trap 'rm -rf $working_directory/tmp_mrun
324	if [[ $locat != localhost ]]
325	then
326	# if [[ ! -f ${mrun_path}/statistik/mrun_statistik ]]
327	# then
328	# cat > ${mrun_path}/statistik/mrun_statistik << %STATEND%
329	#MRUN-calls on $localhost
330	#
331	#date and time user localhost remotehost termination mrun-command
332	#--------------------------------------------------------------------------------------------------------------------
333	#%STATEND%
334	# chmod 666 ${mrun_path}/statistik/mrun_statistik
335	# fi
336	#
337	# # EINTRAG IN DIE STATISTIK-DATEI
338	# string4=$host
339	# string5=$locat
340	# if [[ "$job_on_file" = "" && $locat != control_c && $locat != user_abort ]]
341	# then
342	# if [[ $do_batch = true ]]
343	# then
344	# printf "$string1$string2$string3$string4$string5$mrun_com \n" >> ${mrun_path}/statistik/mrun_statistik
345	# else
346	# printf "$string1$string2$string3$string4$string5$mc \n" >> ${mrun_path}/statistik/mrun_statistik
347	# fi
348	# fi
349	echo " " > /dev/null
350	fi
351
352	if [[ $locat != normal && $locat != control_c && $locat != local_compile ]]
353	then
354
355	# EVENTUELLE ERROR-KOMMANDOS ABARBEITEN
356	(( i = 0 ))
357	while (( i < iec ))
358	do
359	(( i = i + 1 ))
360	printf "\n *** Execution of ERROR-command:\n"
361	printf " >>> ${err_command[$i]}\n"
362	eval ${err_command[$i]}
363	done
364	if [[ -n $interpreted_config_file ]] then
365	rm -rf $interpreted_config_file
366	fi
367	if [[ -n .mrun_environment ]] then
368	rm -rf .mrun_environment
369	fi
370	if [[ $tmpcreate = true ]]
371	then
372	printf "\n *** Contents of \"$TEMPDIR\":\n"
373	ls -al; cd
374	[[ $delete_temporary_catalog = true ]] && rm -rf $TEMPDIR
375	fi
376	if [[ "$dvrserver_id" != "" ]]
377	then
378	echo "+++ killing dvrserver_id=$dvrserver_id"
379	kill $dvrserver_id
380	fi
381	if [[ -f ~/job_queue/JOBINFO.$QSUB_REQID ]]
382	then
383	rm -rf ~/job_queue/JOBINFO.$QSUB_REQID
384	fi
385	printf "\n\n+++ MRUN killed \n\n"
386	elif [[ $locat != control_c ]]
387	then
388	printf "\n\n --> all actions finished\n\n"
389	printf " Bye, bye $usern !!\n\n"
390	fi' exit
391
392
393	# BEI TERMINAL-BREAK:
394	trap 'rm -rf $working_directory/tmp_mrun
395	[[ $tmpcreate = true ]] && (cd; rm -rf $TEMPDIR)
396	if [[ -f ~/job_queue/JOBINFO.$QSUB_REQID ]]
397	then
398	rm -rf ~/job_queue/JOBINFO.$QSUB_REQID
399	fi
400	if [[ "$dvrserver_id" != "" ]]
401	then
402	echo "+++ killing dvrserver_id=$dvrserver_id"
403	kill $dvrserver_id
404	fi
405	printf "\n+++ MRUN killed by \"^C\" \n\n"
406	locat=control_c
407	exit
408	' 2
409
410
411	# CHECK IF THE PATH FOR THE PALM BINARIES (SCRIPTS+UTILITY-PROGRAMS) HAS
412	# BEEN SET
413	if [[ "$PALM_BIN" = "" ]]
414	then
415	printf "\n +++ environment variable PALM_BIN has not been set"
416	printf "\n please set it to the directory where the PALM scripts are located"
417	locat=palm_bin; exit
418	fi
419	export PATH=$PALM_BIN:$PATH
420
421
422
423	# SHELLSCRIPT-OPTIONEN EINLESEN UND KOMMANDO NEU ZUSAMMENSETZEN, FALLS ES
424	# FUER FOLGEJOBS BENOETIGT WIRD
425	while getopts :a:AbBc:Cd:D:Fg:G:h:H:i:IkK:m:M:n:o:Op:P:q:r:R:s:St:T:u:U:vxX:yY: option
426	do
427	case $option in
428	(a) afname=$OPTARG;;
429	(A) store_on_archive_system=false; mc="$mc -A";;
430	(b) do_batch=true; mc="$mc -b";;
431	(B) delete_temporary_catalog=false; mc="$mc -B";;
432	(c) config_file=$OPTARG; mc="$mc -c$OPTARG";;
433	(C) restart_run=true; mc="$mc -C";;
434	(d) fname=$OPTARG; mc="$mc -d$OPTARG";;
435	(D) cpp_opts="$cpp_opts $OPTARG"; mc="$mc -D'$OPTARG'";;
436	(F) job_on_file="-D"; mc="$mc -F";;
437	(g) group_number=$OPTARG; mc="$mc -g$OPTARG";;
438	(G) global_revision=$OPTARG; mc="$mc -G'$OPTARG'";;
439	(h) host=$OPTARG; mc="$mc -h$OPTARG";;
440	(H) fromhost=$OPTARG; mc="$mc -H$OPTARG";;
441	(i) input_list=$OPTARG; mc="$mc -i'$OPTARG'";;
442	(I) ignore_archive_error=true; mc="$mc -I";;
443	(k) keep_data_from_previous_run=true; mc="$mc -k";;
444	(K) additional_conditions="$OPTARG"; mc="$mc -K'$OPTARG'";;
445	(m) memory=$OPTARG; mc="$mc -m$OPTARG";;
446	(M) makefile=$OPTARG; mc="$mc -M$OPTARG";;
447	(n) node_usage=$OPTARG; mc="$mc -n$OPTARG";;
448	(o) output_list=$OPTARG; mc="$mc -o'$OPTARG'";;
449	(O) use_openmp=true; mc="$mc -O";;
450	(p) package_list=$OPTARG; mc="$mc -p'$OPTARG'";;
451	(P) return_password=$OPTARG; mc="$mc -P$OPTARG";;
452	(q) queue=$OPTARG; mc="$mc -q$OPTARG";;
453	(r) run_mode=$OPTARG; mc="$mc -r'$OPTARG'";;
454	(R) remotecall=true;return_addres=$OPTARG; mc="$mc -R$OPTARG";;
455	(s) source_list=$OPTARG; mc="$mc -s'$OPTARG'";;
456	(S) read_from_config=false; mc="$mc -S";;
457	(t) cpumax=$OPTARG; mc="$mc -t$OPTARG";;
458	(T) tasks_per_node=$OPTARG; mc="$mc -T$OPTARG";;
459	(u) remote_username=$OPTARG; mc="$mc -u$OPTARG";;
460	(U) return_username=$OPTARG; mc="$mc -U$OPTARG";;
461	(v) silent=true; mc="$mc -v";;
462	(x) do_trace=true;set -x; mc="$mc -x";;
463	(X) numprocs=$OPTARG; mc="$mc -X$OPTARG";;
464	(y) ocean_file_appendix=true; mc="$mc -y";;
465	(Y) run_coupled_model=true; coupled_dist=$OPTARG; mc="$mc -Y'$OPTARG'";;
466	(\?) printf "\n +++ unknown option $OPTARG \n"
467	printf "\n --> type \"$0 ?\" for available options \n"
468	locat=parameter;exit;;
469	esac
470	done
471
472
473	# EVTL. POSITIONSPARAMETER EINLESEN
474	# ZUR ZEIT GIBT ES NUR DEN PARAMETER ? (=KURZINFO)
475	shift OPTIND-1
476
477
478	# KURZE AUFRUFBESCHREIBUNG WIRD HIER AUSGEGEBEN
479	if [[ "$1" = "?" ]]
480	then
481	(printf "\n *** mrun can be called as follows:\n"
482	printf "\n $mrun_script_name -b -c.. -d.. -D.. -f.. -F -h.. -i.. -I -K.. -m.. -o.. -p.. -r.. -R -s.. -t.. -T.. -v -x -X.. -y -Y.. <modus>\n"
483	printf "\n Description of available options:\n"
484	printf "\n Option Description Default-Value"
485	printf "\n -a base name of input files equiv. -d"
486	printf "\n -A no archiving when using file-attribute fl"
487	printf "\n -b batch-job on local machine ---"
488	printf "\n -B do not delete temporary directory at end ---"
489	printf "\n -c configuration file .mrun.config"
490	printf "\n -d base name of files attached to program test"
491	printf "\n -D preprocessor(cpp)-directives \"\" "
492	printf "\n -F create remote job file only ---"
493	printf "\n -h execution host $localhost_realname"
494	printf "\n -i INPUT control list \"\" "
495	printf "\n -I archiving errors of previous batch-jobs"
496	printf "\n will be ignored"
497	printf "\n -k keep data from previous run"
498	printf "\n -K additional conditions for controling"
499	printf "\n usage of conditional code and"
500	printf "\n env-variables in configuration file \"\" "
501	printf "\n -m memory demand in MB (batch-jobs) 0 MB"
502	printf "\n -M Makefile name Makefile"
503	printf "\n -n node usage (shared/not_shared) depending on -h"
504	printf "\n -o OUTPUT control list \"\" "
505	printf "\n -O use OpenMP ---"
506	printf "\n -p software package list \"\" "
507	printf "\n -q queue \"$queue\" "
508	printf "\n -r run control list (combines -i -o) \"\" "
509	printf "\n -s filenames of routines to be compiled \"\" "
510	printf "\n must end with .f, .f90, .F, or .c !"
511	printf "\n use \"..\" for more than one file and wildcards"
512	printf "\n -s TEST compiles all files with w-permit"
513	printf "\n -S config file interpreted by shellscript ---"
514	printf "\n -t allowed cpu-time in seconds (batch) 0"
515	printf "\n -T tasks per node depending on -h"
516	printf "\n -u username on remote machine \"\" "
517	printf "\n -v no prompt for confirmation ---"
518	printf "\n -x tracing of mrun for debug purposes ---"
519	printf "\n -X # of processors (on parallel machines) 1"
520	printf "\n -y add appendix \"_O\" to all local output"
521	printf "\n files (ocean precursor runs followed by"
522	printf "\n coupled atmosphere-ocean runs) ---"
523	printf "\n -Y run coupled model, \"#1 #2\" with"
524	printf "\n #1 atmosphere and #2 ocean processors \"#/2 #/2\" depending on -X"
525	printf "\n "
526	printf "\n Possible values of positional parameter <modus>:"
527	printf "\n \"?\" - this outline \n\n") \| more
528	exit
529	elif [[ "$1" != "" ]]
530	then
531	printf "\n +++ positional parameter $1 unknown \n"
532	locat=parameter; exit
533	fi
534
535
536
537	# KURZE STARTMELDUNG
538	printf "\n*** $version "
539	printf "\n will be executed. Please wait ..."
540
541
542
543	# PRUEFEN, OB KONFIGURATIONS-DATEI VORHANDEN
544	if [[ ! -f $config_file ]]
545	then
546	printf "\n\n +++ configuration file: "
547	printf "\n $config_file"
548	printf "\n does not exist"
549	locat=connect; exit
550	fi
551
552
553	# HOST-IDENTIFIER (local_host) AUS KONFIGURATIONSDATEI BESTIMMEN
554	line=""
555	grep "%host_identifier" $config_file > tmp_mrun
556	while read line
557	do
558	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
559	then
560	HOSTNAME=`echo $line \| cut -d" " -s -f2`
561	host_identifier=`echo $line \| cut -d" " -s -f3`
562	if [[ $localhost_realname = $HOSTNAME ]]
563	then
564	localhost=$host_identifier
565	break
566	fi
567	fi
568	done < tmp_mrun
569
570	if [[ "$localhost" = "" ]]
571	then
572	printf "\n\n +++ no host identifier found in configuration file \"$config_file\""
573	printf "\n for local host \"$localhost_realname\"."
574	printf "\n Please add line"
575	printf "\n \"\%host_identifier $localhost_realname <identifier>\""
576	printf "\n to the configuration file."
577	locat=localhost; exit
578	fi
579
580
581	# HOSTSPEZIFISCHE VARIABLEN SETZEN
582	case $localhost_realname in
583	(breg-en0\|berni-en0) archive_system=tivoli;;
584	(cs*) archive_system=ut;;
585	(fimm.bccs.uib.no) fimm=true;;
586	(gate\|n-sx) PATH=$PALM_BIN:$PATH:/usr/bin/nqsII;;
587	(hreg-en0\|hanni-en0) archive_system=tivoli;;
588	(scirocco) scirocco=true;;
589	esac
590
591
592
593	# BASISNAME DER INPUT-DATEIEN GLEICH ALLGEMEINEM BASISNAMEN SETZEN,
594	# WENN NICHT VOM BENUTZER ANDERS BESTIMMT
595	[[ "$afname" = "" ]] && afname=$fname
596
597
598	# EVTL. RUN-MODUS DEN I/O-LISTEN HINZUFUEGEN
599	if [[ "$run_mode" != "" ]]
600	then
601	input_list="$input_list $run_mode"
602	output_list="$output_list $run_mode"
603	fi
604
605
606	# RECHNERNAMEN ABSPEICHERN, VON DEM AUS JOB GESTARTET WIRD,
607	# ALLERDINGS NUR DANN, WENN NICHT PER OPTION -H BEREITS EIN WERT
608	# ZUGEWIESEN WURDE (MRUN MACHT DIES IMMER, WENN ES SELBST BATCH-JOBS
609	# STARTET)
610	if [[ "$fromhost" = "" ]]
611	then
612	fromhost=$localhost
613	fi
614
615
616	# PRUEFEN, OB MRUN NUR TESTWEISE AUF DER LOKALEN MASCHINE KOMPILIEREN SOLL
617	if [[ "$source_list" = LOCAL_COMPILE_TEST ]]
618	then
619	source_list=TEST
620	local_compile=true
621	host=$localhost
622	fi
623
624
625	# PRUEFEN, OB AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL
626	# WERT VON do_remote WIRD FUER DATEIVERBINDUNGEN BENOETIGT.
627	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
628	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
629	if [[ -n $host && "$host" != $localhost ]]
630	then
631	do_batch=true
632	do_remote=true
633	case $host in
634	(ibm\|ibmb\|ibmh\|ibms\|ibmy\|nech\|necriam\|lcsgib\|lcsgih\|lctit\|unics\|lcxt4) true;;
635	(*) printf "\n"
636	printf "\n +++ sorry: execution of batch jobs on remote host \"$host\""
637	printf "\n is not available"
638	locat=nqs; (( iec = 0 )); exit;;
639	esac
640	else
641	host=$localhost
642	fi
643
644
645	# ZUSATZBEDINGUNGEN (OPTION -K) AUSWERTEN
646	if [[ -n $additional_conditions ]]
647	then
648	# echo $additional_conditions \| cut -d" " -f1-3 \| read cond1 cond2 dummy
649	cond1=`echo $additional_conditions \| cut -d" " -f1`
650	cond2=`echo $additional_conditions \| cut -d" " -s -f2`
651	dummy=`echo $additional_conditions \| cut -d" " -s -f3`
652	if [[ -n $dummy ]]
653	then
654	printf "\n +++ more than 2 additional conditions given for Option \"-K\""
655	locat=options; exit
656	fi
657	fi
658
659
660	# KOPPLUNGSEIGENSCHAFTEN (-Y) AUSWERTEN UND coupled_mode BESTIMMEN
661	if [[ $run_coupled_model = true ]]
662	then
663
664	if [[ -n $coupled_dist ]]
665	then
666
667	numprocs_atmos=`echo $coupled_dist \| cut -d" " -s -f1`
668	numprocs_ocean=`echo $coupled_dist \| cut -d" " -s -f2`
669
670	if (( $numprocs_ocean + $numprocs_atmos != $numprocs ))
671	then
672
673	printf "\n +++ number of processors does not fit to specification by \"-Y\"."
674	printf "\n PEs (total) : $numprocs"
675	printf "\n PEs (atmosphere): $numprocs_atmos"
676	printf "\n PEs (ocean) : $numprocs_ocean"
677	locat=coupling; exit
678
679	# REARRANGING BECAUSE CURRENTLY ONLY 1:1 TOPOLOGIES ARE SUPPORTED
680	# THIS SHOULD BE REMOVED IN FUTURE
681	elif (( $numprocs_ocean != $numprocs_atmos ))
682	then
683
684	printf "\n +++ currently only 1:1 topologies are supported"
685	printf "\n PEs (total) : $numprocs"
686	printf "\n PEs (atmosphere): $numprocs_atmos"
687	printf "\n PEs (ocean) : $numprocs_ocean"
688	(( numprocs_atmos = $numprocs / 2 ))
689	(( numprocs_ocean = $numprocs / 2 ))
690	printf "\n +++ rearranged topology to $numprocs_atmos:$numprocs_ocean"
691
692	fi
693
694	else
695
696	(( numprocs_ocean = $numprocs / 2 ))
697	(( numprocs_atmos = $numprocs / 2 ))
698
699	fi
700	coupled_dist=`echo "$numprocs_atmos $numprocs_ocean"`
701
702	# GET coupled_mode FROM THE CONFIG FILE
703	line=""
704	grep "%cpp_options.-D__mpi2.$host" $config_file > tmp_mrun
705	while read line
706	do
707	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" && ( $(echo $line \| cut -d" " -s -f4) = $cond1 \|\| $(echo $line \| cut -d" " -s -f4) = $cond2 ) ]]
708	then
709	coupled_mode="mpi2"
710	fi
711	done < tmp_mrun
712
713	fi
714
715
716	# PRUEFEN, OB EVTL. BEI VORHERGEHENDEM LAUF (KETTENJOB) EINE
717	# ARCHIVIERUNG FEHLGESCHLAGEN IST
718	if [[ -f ~/job_queue/ARCHIVE_ERROR_$fname ]]
719	then
720	if [[ $ignore_archive_error = false ]]
721	then
722	printf "\n +++ data archiving of previous run failed"
723	printf "\n see directory \~/job_queue on remote machine"
724	locat=archive; exit
725	else
726	printf "\n +++ warning: data archiving in a previous run failed"
727	printf "\n MRUN continues, trying to get backup copy"
728	fi
729	fi
730
731
732
733	# LESEN UND INTERPRETIEREN DER KONFIGURATIONS-DATEI VOM SHELLSCRIPT AUS
734	# VORUEBERGEHEND ZWINGEND AUF LINUX-RECHNERN
735	if [[ "$read_from_config" = false ]]
736	then
737
738	[[ $silent = false ]] && printf "\n Reading the configuration file... "
739	while read zeile
740	do
741	[[ $silent = false ]] && printf "."
742
743
744	# ZUERST EVENTUELL VORKOMMENDE ENVIRONMENT-VARIABLEN DURCH IHRE WERTE
745	# ERSETZEN
746	eval zeile=\"$zeile\"
747
748
749	# INTERPRETATION DER ZEILE
750	if [[ "$(echo $zeile)" = "" ]]
751	then
752	# LEERZEILE, KEINE AKTION
753	continue
754
755	elif [[ "$(echo $zeile \| cut -c1)" = "#" ]]
756	then
757
758	# ZEILE IST KOMMENTARZEILE
759	true
760
761	elif [[ "$(echo $zeile \| cut -c1)" = "%" ]]
762	then
763
764	# ZEILE DEFINIERT ENVIRONMENT-VARIABLE
765	zeile=$(echo $zeile \| cut -c2-)
766	# echo $zeile \| cut -d" " -f1-5 \| read var value for_host for_cond1 for_cond2
767	var=`echo $zeile \| cut -d" " -f1`
768	value=`echo $zeile \| cut -d" " -s -f2`
769	for_host=`echo $zeile \| cut -d" " -s -f3`
770	for_cond1=`echo $zeile \| cut -d" " -s -f4`
771	for_cond2=`echo $zeile \| cut -d" " -s -f5`
772
773	if [[ "$for_host" = "" \|\| ( "$for_host" = $host && "$for_cond1" = "$cond1" && "$for_cond2" = "$cond2" ) \|\| $(echo "$input_list$output_list"\|grep -c "$for_host") != 0 ]]
774	then
775
776	# BEI COMPILER- CPP- ODER LINKEROPTIONEN EVTL ":" DURCH " "
777	# ERSETZEN. "::" WIRD DURCH ":" ERSETZT.
778	value=`echo $value \| sed 's/::/%DUM%/g' \| sed 's/:/ /g' \| sed 's/%DUM%/:/g'`
779
780
781	# ENVIRONMENT-VARIABLE WIRD WERT AUS KONFIGURATIONSDATEI
782	# ZUGEWIESEN, WENN SIE SELBST NOCH KEINEN WERT UEBER DIE
783	# ENTSPRECHENDE SCRIPT-OPTION ERHALTEN HAT. SOLCHE
784	# VARIABLEN HAETTEN DANN DEN WERT "" ODER IM INTEGER-FALL DEN
785	# WERT 0. ALLGEMEINE REGEL ALSO: SCRIPT-OPTION GEHT UEBER
786	# KONFIGURATIONSDATEI
787	if [[ "$(eval echo \$$var)" = "" \|\| "$(eval echo \$$var)" = "0" ]]
788	then
789	eval $var=\$value
790
791	# EVTL. BILDSCHIRMAUSGABEN DER ENVIRONMENT-VARIABLEN
792	if [[ $do_trace = true ]]
793	then
794	printf "\n*** ENVIRONMENT-VARIABLE $var = $value"
795	fi
796	fi
797
798	# WENN ENVIRONMENT-VARIABLE HOST VEREINBART, DANN SOFORT AUSWERTEN
799	# WERT VON do-remote WIRD BEI DATEIVERBINDUNGEN BENOETIGT
800	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
801	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
802	if [[ $var = host ]]
803	then
804	if [[ -n $host && "$host" != $localhost ]]
805	then
806	do_batch=true
807	do_remote=true
808	case $host in
809	(ibm\|ibms\|ibmy\|lcsgib\|lcsgih\|lctit\|nech\|necriam\|unics\|lcxt4) true;;
810	(*) printf "\n +++ sorry: execution of batch jobs on remote host \"$host\""
811	printf "\n is not available"
812	locat=nqs; exit;;
813	esac
814	else
815	host=$localhost
816	fi
817	fi
818
819	# VOM BENUTZER DEFINIERTE ENVIRONMENT VARIABLEN MUESSEN PRINZIPIELL
820	# EXPORTIERT WERDEN, DA SIE VIELLEICHT IN WEITER UNTEN AUFZURUFEN-
821	# DEN PROGRAMMEN BENOETIGT WERDEN
822	export $var
823	fi
824
825
826
827
828	elif [[ "$(echo $zeile \| cut -c1-3)" = "EC:" ]]
829	then
830
831	# ZEILE DEFINIERT ERROR-KOMMANDO
832	(( iec = iec + 1 ))
833	zeile=$(echo $zeile \| cut -c4-)
834	err_command[$iec]="$zeile"
835
836	elif [[ "$(echo $zeile \| cut -c1-3)" = "IC:" ]]
837	then
838
839	# ZEILE DEFINIERT INPUT-KOMMANDO
840	(( iic = iic + 1 ))
841	zeile=$(echo $zeile \| cut -c4-)
842	in_command[$iic]="$zeile"
843
844	elif [[ "$(echo $zeile \| cut -c1-3)" = "OC:" ]]
845	then
846
847	# ZEILE DEFINIERT OUTPUT-KOMMANDO
848	(( ioc = ioc + 1 ))
849	zeile=$(echo $zeile \| cut -c4-)
850	out_command[$ioc]="$zeile"
851
852	else
853
854	# ZEILE DEFINIERT DATEIVERBINDUNG. EINLESEN DER DATEIEIGENSCHAFTEN
855	# s2a: in/out - Feld
856	# s2b: loc - Feld (optional)
857	# s2c: tr/ar - Feld (optional)
858	# echo $zeile \| cut -d" " -f1-2 \| read s1 s2
859	s1=`echo $zeile \| cut -d" " -f1`
860	s2=`echo $zeile \| cut -d" " -s -f2`
861	s2a=$(echo $s2 \| cut -d":" -f1)
862	if [[ $(echo $s2 \| grep -c ":") = 0 ]]
863	then
864	s2b=""
865	s2c=""
866	else
867	# echo $s2 \| cut -d":" -f2-3 \| sed 's/:/ /g' \| read s2b s2c
868	s2b=`echo $s2 \| cut -d":" -f2 \| sed 's/:/ /g'`
869	s2c=`echo $s2 \| cut -d":" -s -f3 \| sed 's/:/ /g'`
870	fi
871	# echo $zeile \| cut -d" " -f3-6 \| read s3 s4 s5 s6
872	s3=`echo $zeile \| cut -d" " -f3`
873	s4=`echo $zeile \| cut -d" " -s -f4`
874	s5=`echo $zeile \| cut -d" " -s -f5`
875	s6=`echo $zeile \| cut -d" " -s -f6`
876
877
878	# ABSPEICHERN DER DATEIVERBINDUNG, FALLS IN INPUT- ODER OUTPUT-LIST
879	# VERMERKT. VARIABLE S3 KANN AUCH LISTE ENTHALTEN (FELDTRENNER ":")
880	# DATEIVERBINDUNG WIRD DANN NICHT ABGESPEICHERT UND GEPRUEFT, WENN
881	# PROGRAMMLAUF AUF REMOTE-MASCHINE ERFOLGT UND DATEI NUR LOKAL VOR-
882	# HANDEN SEIN MUSS (D.H. s2b = loc)
883	IFSALT="$IFS"; IFS="$IFS:"
884	if [[ "$s2a" = in && ! ( $do_remote = true && ( "$s2b" = loc \|\| "$s2b" = locopt ) ) ]]
885	then
886	found=false
887	for actual in $input_list
888	do
889	for formal in $s3
890	do
891	[[ $actual = $formal \|\| "$formal" = "-" ]] && found=true
892	done
893	done
894	if [[ $found = true ]]
895	then
896	(( iin = iin + 1 ))
897	localin[$iin]=$s1; transin[$iin]=$s2b; actionin[$iin]=$s2c;
898	typein[$iin]=$s3; pathin[$iin]=$s4; endin[$iin]=$s5;
899	extin[$iin]=$s6
900	fi
901	elif [[ "$s2a" = out && ! ( $do_remote = true && "$s2b" = loc ) ]]
902	then
903	found=false
904	for actual in $output_list
905	do
906	for formal in $s3
907	do
908	[[ $actual = $formal \|\| "$formal" = "-" ]] && found=true
909	done
910	done
911	if [[ $found = true ]]
912	then
913	(( iout = iout + 1 ))
914	localout[$iout]=$s1; actionout[$iout]=$s2c; typeout[$iout]=$s3;
915	pathout[$iout]=$s4; endout[$iout]=$s5; extout[$iout]=$s6
916	fi
917	elif [[ "$s2a" != in && "$s2a" != out ]]
918	then
919	printf "\n +++ I/O-attribute in configuration file $config_file has the invalid"
920	printf "\n value \"$s2\". Only \"in\" and \"out\" are allowed!"
921	locat=connect; exit
922	fi
923	IFS="$IFSALT"
924	fi
925	done < $config_file
926
927	else
928
929
930	# INTERPRETATION DER KONFIGURATIONSDATEI MITTELS FORTRAN 90 - PROGRAMM
931	[[ $silent = false ]] && printf "..."
932	export cond1 cond2 config_file do_remote do_trace input_list localhost output_list
933	export interpreted_config_file=.icf.$RANDOM
934
935
936
937	# ENVIRONMENT-VARIABLEN FUER INTERPRET_CONFIG UEBER NAMELIST_DATEI ZUR
938	# VERFUEGUNG STELLEN
939	cat > .mrun_environment << %%END%%
940	&mrun_environment cond1 = '$cond1', cond2 = '$cond2',
941	config_file = '$config_file', do_remote = '$do_remote',
942	do_trace = '$do_trace', host = '$host',
943	input_list = '$input_list', icf = '$interpreted_config_file',
944	localhost = '$localhost', output_list = '$output_list' /
945
946	%%END%%
947
948	# WERTE VON MRUN-OPTIONEN SICHERN UND DAMIT GEGEBENENFALLS SPAETER DIE
949	# IN DER KONFIGURAIONSDATEI ANGEGEBENEN WERTE UEBERSTEUERN
950	mrun_memory=$memory
951	mrun_group_number=$group_number
952	mrun_cpumax=$cpumax
953	mrun_numprocs=$numprocs
954
955	if [[ $localhost_realname = "sx-fep" ]]
956	then
957	/home/COAR/NC/raasch/pub/interpret_config_necriam.x
958	else
959	interpret_config.x
960	fi
961	rm .mrun_environment
962
963
964	# AUSFUEHRUNG DER GENERIERTEN SHELL-KOMMANDOS IN DIESER SHELL
965	chmod u+x $interpreted_config_file
966	export PATH=$PATH:.
967	. $interpreted_config_file
968	rm $interpreted_config_file
969
970
971	# OPTIONSWERTE UEBERSTEUERN KONFIGURATIONSDATEI
972	[[ $mrun_memory != 0 ]] && memory=$mrun_memory
973	[[ "$mrun_group_number" != "none" ]] && group_number=$mrun_group_number
974	[[ $mrun_cpumax != 0 ]] && cpumax=$mrun_cpumax
975	[[ "$mrun_numprocs" != "" ]] && numprocs=$mrun_numprocs
976
977	fi
978
979
980	# QUELLTEXTVERZEICHNIS AUF LOKALER MASCHINE AUS KONFIGURATIONSDATEI
981	# BESTIMMEN (WUERDE SONST EVTL. DAS VERZEICHNIS DES JEWEILS UNTER -h
982	# ANGEGEBENEN REMOTE-RECHNERS SEIN)
983	# BEI BATCH-JOBS SIND DIE ZU UEBERSETZENDEN PROGRAMMTEILE SCHON KOMPLETT
984	if [[ "$SOURCES_COMPLETE" = "" ]]
985	then
986
987	# ZUERST PRUEFEN, OB EIN GLOBALER QUELLTEXTPFAD FUER ALLE RECHNER
988	# VEREINBART WURDE
989	source_path=""
990	line=""
991	grep "%source_path" $config_file > tmp_mrun
992	while read line
993	do
994	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
995	then
996	if [[ "$(echo $line \| cut -d" " -f3)" = "" ]]
997	then
998	global_source_path=`echo $line \| cut -d" " -f2`
999	fi
1000	fi
1001	done < tmp_mrun
1002
1003	line=""
1004	found=false
1005	grep " $localhost" $config_file \| grep "%source_path" > tmp_mrun
1006	while read line
1007	do
1008	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
1009	then
1010	if [[ $found = true ]]
1011	then
1012	printf "\n\n +++ more than one source path found in configuration file"
1013	printf "\n for local host \"$localhost\" "
1014	locat=source_path; exit
1015	fi
1016	source_path=`echo $line \| cut -d" " -f2`
1017	found=true
1018	fi
1019	done < tmp_mrun
1020	rm tmp_mrun
1021
1022	if [[ "$source_path" = "" ]]
1023	then
1024	if [[ "$global_source_path" != "" ]]
1025	then
1026	source_path=$global_source_path
1027	else
1028	printf "\n\n +++ no source path found in configuration file"
1029	printf "\n for local host \"$localhost\" "
1030	locat=source_path; exit
1031	fi
1032	fi
1033	eval source_path=$source_path
1034
1035	if [[ ! -d $source_path ]]
1036	then
1037	printf "\n\n +++ source path \"$source_path\" on local host"
1038	printf "\n \"$localhost\" does not exist"
1039	locat=source_path; exit
1040	fi
1041
1042	fi
1043
1044
1045	# GLOBALE REVISIONSNUMMER ERMITTELN (FORTSETZUNGSLAEUFEN WIRD DIESE
1046	# DURCH OPTION -G MITGETEILT)
1047	if [[ "$global_revision" = "" ]]
1048	then
1049	global_revision=`svnversion $source_path 2>/dev/null`
1050	global_revision="Rev: $global_revision"
1051	fi
1052
1053
1054	# NOCHMAL PRUEFEN, OB AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL
1055	# (HOST KANN IN KONFIGURATIONSDATEI ANDERS FESTGELEGT WORDEN SEIN)
1056	# WERT VON do_remote WIRD FUER DATEIVERBINDUNGEN BENOETIGT.
1057	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
1058	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
1059	if [[ -n $host && "$host" != $localhost ]]
1060	then
1061	do_batch=true
1062	do_remote=true
1063	case $host in
1064	(ibm\|ibmb\|ibmh\|ibms\|ibmy\|lcsgib\|lcsgih\|lctit\|nech\|necriam\|unics\|lcxt4) true;;
1065	(*) printf "\n"
1066	printf "\n +++ sorry: execution of batch jobs on remote host \"$host\""
1067	printf "\n is not available"
1068	locat=nqs; (( iec = 0 )); exit;;
1069	esac
1070	else
1071	host=$localhost
1072	fi
1073
1074
1075	# PRUEFUNG EINIGER PROZESSORZAHLANGABEN BEI RECHNUNGEN AUF PARALLELRECHNERN
1076	if [[ "$cond1" = parallel \|\| "$cond2" = parallel ]]
1077	then
1078
1079	# PRUEFEN, OB DIE ANZAHL DER ZU VERWENDENDEN PES ANGEGEBEN WURDE
1080	if [[ ! -n $numprocs ]]
1081	then
1082	printf "\n"
1083	printf "\n +++ option \"-K parallel\" requires additional specification"
1084	printf "\n of the number of processors to be used by"
1085	printf "\n mrun-option \"-X\" or by environment-variable"
1086	printf "\n \"numprocs\" in the configuration file"
1087	locat=numprocs; (( iec = 0 )); exit
1088	fi
1089
1090	# PRUEFEN, OB DIE PROZESSORANZAHL PRO KNOTEN ANGEGEBEN WURDE (GGF.
1091	# DEFAULT-WERT SETZEN) UND OB SIE EIN GANZZAHLIGER TEILER DER
1092	# GESAMTPROZESSORANZAHL IST
1093	if [[ $host = nech \|\| $host = necriam \|\| $host = ibmh \|\| $host = ibmb \|\| $host = ibms ]]
1094	then
1095	[[ "$tasks_per_node" = "" ]] && tasks_per_node=6
1096	(( ival = $tasks_per_node ))
1097	(( pes = numprocs ))
1098	# if [[ $(echo $package_list \| grep -c dvrp_graphics+1PE) = 1 ]]
1099	# then
1100	# (( pes = pes - 1 ))
1101	# fi
1102	(( ii = pes / ival ))
1103	if (( pes - ii * ival > 0 ))
1104	then
1105	printf "\n"
1106	printf "\n +++ tasks per node (option \"-T\") must be an integral"
1107	printf "\n divisor of the total number of processors (option \"-X\")"
1108	printf "\n values of this mrun-call: \"-T $tasks_per_node\" \"-X $numprocs\""
1109	locat=tasks_per_node; (( iec = 0 )); exit
1110	fi
1111	fi
1112
1113	# IBMY HAT NUR EINEN KNOTEN
1114	if [[ $host = ibmy ]]
1115	then
1116	if [[ "$tasks_per_node" != "" && "$tasks_per_node" != "$numprocs" ]]
1117	then
1118	printf "\n"
1119	printf "\n +++ on ibmy, tasks per node (option \"-T\") must be equal to the"
1120	printf "\n total number of processors (option \"-X\")"
1121	printf "\n values of this mrun-call: \"-T $tasks_per_node\" \"-X $numprocs\""
1122	locat=tasks_per_node; (( iec = 0 )); exit
1123	fi
1124	fi
1125
1126	# FALLS OPENMP PARALLELISIERUNG VERWENDET WERDEN SOLL, ANZAHL VON THREADS
1127	# SETZEN UND ZAHL DER TASKS PRO KNOTEN AUF 1 SETZEN
1128	if [[ $use_openmp = true ]]
1129	then
1130	threads_per_task=$tasks_per_node
1131	tasks_per_node=1
1132	fi
1133	OOPT="-O $threads_per_task"
1134	TOPT="-T $tasks_per_node"
1135
1136	# GESAMTZAHL DER KNOTEN BESTIMMEN
1137	if [[ "$tasks_per_node" != "" ]]
1138	then
1139	(( nodes = numprocs / ( tasks_per_node * threads_per_task ) ))
1140	fi
1141
1142	# PRUEFEN, OB NODE USAGE EINEN ERLAUBTEN WERT HAT BZW. DEN DEFAULT
1143	# SETZEN
1144	if [[ $node_usage = default ]]
1145	then
1146	if [[ $host = ibms ]]
1147	then
1148	node_usage=shared
1149	elif [[ $host = lctit ]]
1150	then
1151	node_usage=RAM64GB
1152	elif [[ $(echo $host \| cut -c1-5) = lcsgi ]]
1153	then
1154	node_usage=singlejob
1155	else
1156	node_usage=not_shared
1157	fi
1158	fi
1159
1160	if [[ $node_usage != shared && $node_usage != not_shared && $node_usage != singlejob && "$(echo $node_usage \| cut -c1-3)" != "sla" && $node_usage != RAM64GB ]]
1161	then
1162	printf "\n"
1163	printf "\n +++ node usage (option \"-n\") is only allowed to be set"
1164	printf "\n \"shared\" or \"not_shared\""
1165	locat=tasks_per_node; (( iec = 0 )); exit
1166	fi
1167
1168	fi
1169
1170	# PRUEFEN, OB HOSTFILE EXISTIERT
1171	if [[ -n $hostfile ]]
1172	then
1173	if [[ ! -f $hostfile ]]
1174	then
1175	printf "\n"
1176	printf "\n +++ hostfile \"$hostfile\" does not exist"
1177	locat=hostfile; exit
1178	fi
1179	fi
1180
1181	# PRUEFEN, OB RHOSTS DATEI EXISTIERT. GEGEBENENFALLS ANLEGEN BZW. ERWEITERN
1182	if [[ $host = ibmy && $do_remote = false ]]
1183	then
1184	if [[ ! -f $HOME/.rhosts ]]
1185	then
1186	echo "gfdl5.yonsei.ac.kr" > $HOME/.rhosts
1187	printf "\n\n *** file:"
1188	printf "\n $HOME/.rhosts"
1189	printf "\n was created\n"
1190	fi
1191	if [[ $(grep -c gfdl5.yonsei.ac.kr $HOME/.rhosts) = 0 ]]
1192	then
1193	echo "gfdl5.yonsei.ac.kr" >> $HOME/.rhosts
1194	printf "\n\n *** file:"
1195	printf "\n $HOME/.rhosts"
1196	printf "\n was extended by the name of the current host\n"
1197	fi
1198	fi
1199
1200
1201
1202	# FALLS NICHT VORGEGEBEN, DEFAULT-QUEUE AUF DER ZIELMASCHINE FESTLEGEN
1203	if [[ $queue = none ]]
1204	then
1205	case $host in
1206	(ibmb) if [[ $node_usage = shared ]]
1207	then
1208	queue=cshare
1209	else
1210	queue=csolo
1211	fi;;
1212	(ibmh) queue=no_class;;
1213	(ibmy) queue=parallel;;
1214	(lcsgib) queue=bigq;;
1215	(lcsgih) queue=bigq;;
1216	(lctit) queue=RAM64GB;;
1217	(nech) queue=none;;
1218	(necriam) queue=SP;;
1219	(unics) queue=unics;;
1220	esac
1221	fi
1222
1223
1224	# VOLLSTAENDIGE DATEINAMEN DER INPUT-FILES BILDEN,
1225	# INPUT-DATEIEN AUF VORHANDENSEIN PRUEFEN UND EVTL. HOECHSTE ZYKLUSNUMMER
1226	# ERMITTELN
1227	(( i = 0 ))
1228	while (( i < iin ))
1229	do
1230	(( i = i + 1 ))
1231	(( maxcycle = 0 ))
1232
1233	# NAMENSBILDUNG (EVTL. IST FESTER DATEINAME VORGEGEBEN)
1234	if [[ "${actionin[$i]}" = di ]]
1235	then
1236	remotepathin[$i]=${pathin[$i]}/${endin[$i]} # REMOTE-PFAD ERST AUF
1237	# REM-MASCHINE AUSWERTEN
1238	eval filename=${pathin[$i]}/${endin[$i]}
1239	else
1240	remotepathin[$i]=${pathin[$i]}/${afname}${endin[$i]} # REMOTE-PFAD ERST AUF
1241	# REM-MASCHINE AUSWERTEN
1242	eval filename=${pathin[$i]}/${afname}${endin[$i]}
1243	fi
1244
1245	# PRUEFEN AUF VORHANDENSEIN
1246	if [[ $(ls $filename* 2>&1 \| grep -c "not found") = 1 \|\| \
1247	$(ls $filename* 2>&1 \| grep -c "No such file") = 1 \|\| \
1248	$(ls $filename* 2>&1 \| grep -c "does not exist") = 1 ]]
1249	then
1250	# DATEIEN MIT EXTENSION (Z.B. NC) MUESSEN NICHT ZWINGEND VORHANDEN
1251	# SEIN, DESHALB IN SOLCHEN FAELLEN KEIN ABBRUCH. DIES IST NUR EINE
1252	# VORUEBERGEHENDE LOESUNG (OKT 05). NICHT ZWINGEND BENOETIGTE
1253	# EINGABEDATEIEN SOLLTEN EINE SPEZIELLE OPTION IN DER DATEI-
1254	# VERBINDUNGSANWEISUNG BEKOMMEN (Z.B. inopt?)
1255	if [[ "${transin[$i]}" != "locopt" ]]
1256	then
1257	printf "\n\n +++ INPUT-file: "
1258	if [[ "${extin[$i]}" = "" ]]
1259	then
1260	printf "\n $filename"
1261	else
1262	printf "\n $filename.${extin[$i]}"
1263	fi
1264	printf "\n does not exist\n"
1265	locat=input; exit
1266	else
1267	transin[$i]="unavailable"
1268	fi
1269	else
1270
1271	# ZYKLUSNUMMER FESTSTELLEN
1272	ls -1 -d $filename > filelist 2>/dev/null
1273	ls -1 -d $filename.* >> filelist 2>/dev/null
1274	while read zeile
1275	do
1276	cycle=$(print $zeile \| cut -f2 -d".")
1277	if [[ "$cycle" = "$zeile" ]]
1278	then
1279	(( icycle = 0 ))
1280	elif [[ "$cycle" = "${extin[$i]}" ]]
1281	then
1282	(( icycle = 0 ))
1283	else
1284	(( icycle = $cycle ))
1285	fi
1286	if (( icycle > maxcycle ))
1287	then
1288	(( maxcycle = icycle ))
1289	file_to_be_used=$zeile
1290	fi
1291	done <filelist
1292	rm filelist
1293
1294	# EVTL. ZYKLUSNUMMER AN DATEINAMEN ANFUEGEN
1295	if (( maxcycle > 0 ))
1296	then
1297	if [[ "${extin[$i]}" != " " && "${extin[$i]}" != "" ]]
1298	then
1299	filename=${filename}.$maxcycle.${extin[$i]}
1300	else
1301	filename=${filename}.$maxcycle
1302	fi
1303	else
1304	if [[ "${extin[$i]}" != " " && "${extin[$i]}" != "" ]]
1305	then
1306	filename=${filename}.${extin[$i]}
1307	fi
1308	fi
1309
1310	# DATEINAMEN OHNE PFAD ABER MIT ZYKLUSNUMMER ABSPEICHERN,
1311	# DA SPAETER BEI RUECKSPEICHERN VOM ARCHIVSYSTEM EVTL. BENOETIGT
1312	absnamein[$i]=$filename
1313	if (( maxcycle > 0 ))
1314	then
1315	if [[ "${actionin[$i]}" = di ]]
1316	then
1317	frelin[$i]=${endin[$i]}.$maxcycle
1318	else
1319	frelin[$i]=${afname}${endin[$i]}.$maxcycle
1320	fi
1321	else
1322	if [[ "${actionin[$i]}" = di ]]
1323	then
1324	frelin[$i]=${endin[$i]}
1325	else
1326	frelin[$i]=${afname}${endin[$i]}
1327	fi
1328	fi
1329
1330	fi
1331	done
1332
1333
1334	# VOLLSTAENDIGE DATEINAMEN (OHNE $ ODER ~) DER OUTPUT-FILES BILDEN,
1335	# OUTPUT-DATEIEN AUF VORHANDENSEIN PRUEFEN UND EVTL. HOECHSTE ZYKLUSNUMMER
1336	# ERMITTELN ODER, FALLS NICHT VORHANDEN, PRUEFEN, OB SIE SICH ANLEGEN LASSEN
1337	# DIESE AKTIONEN FINDEN NICHT STATT, WENN PROGRAMM AUF REMOTE-MASCHINE
1338	# RECHNET UND DATEI ANSCHLIESSEND TRANSFERIERT WERDEN SOLL!
1339	(( i = 0 ))
1340	while (( i < iout ))
1341	do
1342	(( i = i + 1 ))
1343	if [[ ! ( $fromhost != $localhost && ( "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = tra \|\| "${actionout[$i]}" = trpe ) ) ]]
1344	then
1345	if [[ "${actionout[$i]}" = tr ]]
1346	then
1347	actionout[$i]=""
1348	elif [[ "${actionout[$i]}" = trpe ]]
1349	then
1350	actionout[$i]=pe
1351	elif [[ "${actionout[$i]}" = tra ]]
1352	then
1353	actionout[$i]=a
1354	fi
1355	(( maxcycle = 0 ))
1356	eval filename=${pathout[$i]}/${fname}${endout[$i]}
1357	eval catalogname=${pathout[$i]}
1358	if [[ $(ls $filename* 2>&1 \| grep -c "not found") = 1 \|\| \
1359	$(ls $filename* 2>&1 \| grep -c "No such file") = 1 \|\| \
1360	$(ls $filename* 2>&1 \| grep -c "does not exist") = 1 ]]
1361	then
1362
1363	# OUTPUT-DATEI NICHT VORHANDEN. PRUEFEN, OB ANLEGEN MOEGLICH.
1364	if cat /dev/null > $filename
1365	then
1366	rm $filename
1367	else
1368
1369	# PRUEFEN, OB KATALOG VORHANDEN UND EVTL. DIESEN ANLEGEN
1370	if [[ ! -d $catalogname ]]
1371	then
1372	if mkdir -p $catalogname
1373	then
1374	printf "\n\n *** directory:"
1375	printf "\n $catalogname"
1376	printf "\n was created\n"
1377	else
1378	printf "\n\n +++ OUTPUT-file:"
1379	printf "\n $filename"
1380	printf "\n cannot be created, because directory does not exist"
1381	printf "\n and cannot be created either"
1382	printf "\n"
1383	locat=output ; exit
1384	fi 2>/dev/null
1385	else
1386	printf "\n\n +++ OUTPUT-file:"
1387	printf "\n $filename"
1388	printf "\n cannot be created, although directory exists"
1389	printf "\n"
1390	locat=output ; exit
1391	fi
1392	fi 2>/dev/null
1393	else
1394
1395	# ZYKLUSNUMMER FESTSTELLEN
1396	ls -1 -d $filename > filelist 2>/dev/null
1397	ls -1 -d $filename.* >> filelist 2>/dev/null
1398	while read zeile
1399	do
1400	cycle=$(print $zeile \| cut -f2 -d".")
1401	if [[ "$cycle" = "$zeile" \|\| "$cycle" = ${extout[$i]} ]]
1402	then
1403	(( icycle = 1 ))
1404	else
1405	(( icycle = $cycle + 1 ))
1406	fi
1407	if (( icycle > maxcycle ))
1408	then
1409	(( maxcycle = icycle ))
1410	fi
1411	done <filelist
1412	rm filelist
1413	fi
1414
1415	# EVTL. ZYKLUSNUMMER AN DATEINAMEN ANFUEGEN UND PRUEFEN, OB SICH
1416	# DATEI AUCH WIRKLICH ANLEGEN LAESST. IM APPEND-FALL MUSS AN DEN
1417	# HOECHSTEN VORHANDENEN ZYKLUS-ANGEHAENGT WERDEN. ANLAGEPRUEFUNG
1418	# IST DANN NATUERLICH NICHT ZULAESSIG BZW. MOEGLICH
1419	if [[ "${actionout[$i]}" != a ]]
1420	then
1421	if (( maxcycle > 0 ))
1422	then
1423	filename=${filename}.$maxcycle
1424	if cat /dev/null > $filename
1425	then
1426	rm $filename
1427	else
1428	printf "\n +++ OUTPUT-file:"
1429	printf "\n $filename"
1430	printf "\n cannot be created"
1431	locat=output ; exit
1432	fi
1433	fi
1434	else
1435	(( maxcycle = maxcycle - 1 ))
1436	if (( maxcycle > 0 ))
1437	then
1438	filename=${filename}.$maxcycle
1439	fi
1440	fi
1441
1442	# DATEINAMEN OHNE PFAD ABER MIT ZYKLUSNUMMER ABSPEICHERN,
1443	# DA SPAETER BEI ABLAGE AUF ARCHIVSYSTEM BZW. FUER
1444	# DATEI OUTPUT_FILE_CONNECTIONS EVTL. BENOETIGT
1445	pathout[$i]=$filename
1446	if (( maxcycle > 0 ))
1447	then
1448	frelout[$i]=${fname}${endout[$i]}.$maxcycle
1449	else
1450	frelout[$i]=${fname}${endout[$i]}
1451	fi
1452
1453	fi
1454	done
1455
1456
1457	# DAS DVR-PAKET ERFORDERT EINE ENTSPRECHENDE BIBLIOTHEK
1458	if [[ $(echo $package_list \| grep -c dvrp_graphics) != 0 ]]
1459	then
1460	if [[ "$dvr_inc" = "" ]]
1461	then
1462	printf "\n\n +++ no value for \"dvr_inc\" given in configuration file"
1463	printf "\n This is required for the dvrp_graphics package.\n"
1464	locat=dvr; exit
1465	fi
1466	if [[ "$dvr_lib" = "" ]]
1467	then
1468	printf "\n\n +++ no value for \"dvr_lib\" given in configuration file"
1469	printf "\n This is required for the dvrp_graphics package.\n"
1470	locat=dvr; exit
1471	fi
1472	fi
1473
1474
1475	# PRUEFEN, OB ENTWEDER HAUPTPROGRAMM ODER NUR EIN AUSFUEHRBARES
1476	# PROGRAMM VEREINBART WURDE (IN DIESEM FALL BRAUCHT IM WEITEREN NICHT
1477	# UEBERSETZT ZU WERDEN)
1478	if [[ "$mainprog" = "" && "$executable" = "" ]]
1479	then
1480	printf "\n +++ neither main program nor executable defined"
1481	locat=source; exit
1482	elif [[ "$mainprog" != "" && "$executable" != "" ]]
1483	then
1484	printf "\n +++ main program as well as executable defined"
1485	locat=source; exit
1486	elif [[ "$mainprog" = "" && "$executable" != "" ]]
1487	then
1488	do_compile=false
1489	fi
1490
1491
1492	# SOURCE-VERZEICHNIS ZUM AUFSAMMELN DER ZU UEBERSETZENDEN PROGRAMMTEILE
1493	# ERZEUGEN. HIERHIN WERDEN SPAETER IM FALL VON BATCH-JOBS AUCH DAS MRUN-
1494	# SCRIPTS SOWIE DIE KONFIGURATIONSDATEI KOPIERT
1495	if [[ $restart_run != true && "$SOURCES_COMPLETE" = "" ]]
1496	then
1497	rm -rf SOURCES_FOR_RUN_$fname
1498	mkdir SOURCES_FOR_RUN_$fname
1499	fi
1500
1501
1502	# ALLE ZU UEBERSETZENDEN PROGRAMMTEILE ZUSAMMENSAMMELN
1503	# BEI BATCH-JOBS IST DIES NICHT NOETIG, WEIL DIE PROGRAMMTEILE BEREITS DURCH
1504	# DEN MRUN-AUFRUF ERMITTELT SIND, DER DEN BATCH-JOB GENERIERT HAT, UND
1505	# IM VERZEICHNIS SOURCES_FOR_RUN_... ABGELEGT SIND
1506	if [[ $do_compile = true && "$SOURCES_COMPLETE" = "" ]]
1507	then
1508
1509	[[ "$source_list" = LM ]] && source_list=LOCALLY_MODIFIED
1510	[[ "$source_list" = WP ]] && source_list=WRITE_PERMIT
1511
1512
1513	# EVTL. ZU UEBERSETZENDE PROGRAMMTEILE DADURCH BESTIMMEN, DASS GEPRUEFT
1514	# WIRD, WELCHE DATEIEN WRITE-PERMIT BESITZEN (DATEIEN SOLLTEN DESHALB
1515	# UNTER RCS-KONTROLLE STEHEN). MIT DER VARIABLEN EXCLUDE KOENNEN
1516	# BESTIMMTE DATEIEN GRUNDSAETZLICH VON DER UEBERSETZUNG AUSGESCHLOSSEN
1517	# WERDEN. DIES IST NUR BEI MANUELLEM START VON MRUN DURCH DEN BENUTZER
1518	# MOEGLICH, DA BEI AUTOMATISCHEN RESTARTS TEST DURCH DIE TATSAECHLICH
1519	# ZU UBERSETZENDEN DATEIEN ERSETZT IST.
1520	# ALLE ERMITTELTEN DATEIEN WERDEN IM VERZEICHNIS SOURCES_FOR_RUN_...
1521	# GESAMMELT
1522	if [[ "$source_list" = WRITE_PERMIT ]]
1523	then
1524
1525	source_list=""
1526	cd $source_path
1527
1528
1529	# ALLE MOEGLICHEN QUELLCODEDATEIEN AUFLISTEN
1530	Names=$(ls -1 *.f90 2>&1)
1531	[[ $(echo $Names \| grep -c '*.f90') = 0 ]] && Filenames="$Names"
1532	Names=$(ls -1 *.F90 2>&1)
1533	[[ $(echo $Names \| grep -c '*.F90') = 0 ]] && Filenames="$Filenames $Names"
1534	Names=$(ls -1 *.F 2>&1)
1535	[[ $(echo $Names \| grep -c '*.F') = 0 ]] && Filenames="$Filenames $Names"
1536	Names=$(ls -1 *.f 2>&1)
1537	[[ $(echo $Names \| grep -c '*.f') = 0 ]] && Filenames="$Filenames $Names"
1538	Names=$(ls -1 *.c 2>&1)
1539	[[ $(echo $Names \| grep -c '*.c') = 0 ]] && Filenames="$Filenames $Names"
1540
1541
1542	# DATEIEN MIT WRITE-PERMIT NACH SOURCES_FOR_RUN_... KOPIEREN
1543	for dateiname in $Filenames
1544	do
1545	if [[ -w $dateiname ]]
1546	then
1547	if [[ "$exclude" = "" \|\| $(echo $exclude \| grep -c $dateiname) = 0 ]]
1548	then
1549	cp $dateiname $working_directory/SOURCES_FOR_RUN_$fname
1550	source_list=$source_list"$dateiname "
1551	fi
1552	fi
1553	done
1554
1555	cd - > /dev/null
1556
1557
1558	elif [[ "$source_list" = LOCALLY_MODIFIED ]]
1559	then
1560
1561	# MODIFIZIERTE DATEIEN DER SVN-ARBEITSKOPIE BESTIMMEN
1562	source_list=""
1563	cd $source_path
1564
1565
1566	# PRUEFEN, OB VERZEICHNIS UEBERHAUPT UNTER SVN-KONTROLLE STEHT
1567	if [[ ! -d .svn ]]
1568	then
1569	printf "\n\n +++ source directory"
1570	printf "\n \"$source_path\" "
1571	printf "\n is not under control of \"subversion\"."
1572	printf "\n Please do not use mrun-option \"-s LOCALLY_MODIFIED\"\n"
1573	fi
1574
1575
1576	# ALLE MODIFIZIERTEN QUELLCODEDATEIEN AUFLISTEN
1577	Filenames=""
1578	svn status > tmp_mrun
1579	while read line
1580	do
1581	firstc=`echo $line \| cut -c1`
1582	if [[ $firstc = M \|\| $firstc = "?" ]]
1583	then
1584	Name=`echo "$line" \| cut -c8-`
1585	extension=`echo $Name \| cut -d. -f2`
1586	if [[ "$extension" = f90 \|\| "$extension" = F90 \|\| "$extension" = f \|\| "$extension" = F \|\| "$extension" = c ]]
1587	then
1588	Filenames="$Filenames "$Name
1589	fi
1590	fi
1591	done < tmp_mrun
1592
1593
1594	# DATEIEN NACH SOURCES_FOR_RUN_... KOPIEREN
1595	for dateiname in $Filenames
1596	do
1597	cp $dateiname $working_directory/SOURCES_FOR_RUN_$fname
1598	source_list=$source_list"$dateiname "
1599	done
1600
1601	cd - > /dev/null
1602
1603
1604	# MITTELS OPTION -s ANGEGEBENE DATEIEN NACH SOURCES_FOR_RUN_... KOPIEREN
1605	# BEI AUTOMATISCHEN FORTSETZUNGSLAEUFEN SIND DORT SCHON ALLE DATEIEN
1606	# VORHANDEN
1607	elif [[ "$source_list" != "" && $restart_run != true ]]
1608	then
1609
1610	cd $source_path
1611
1612	for filename in $source_list
1613	do
1614
1615	# QUELLTEXT-DATEI DARF KEINE PFADE BEINHALTEN
1616	if [[ $(print $filename \| grep -c "/") != 0 ]]
1617	then
1618	printf "\n +++ source code file: $filename"
1619	printf "\n must not contain (\"/\") "
1620	locat=source; exit
1621	fi
1622
1623	if [[ ! -f $filename ]]
1624	then
1625	printf "\n +++ source code file: $filename"
1626	printf "\n does not exist"
1627	locat=source; exit
1628	else
1629	cp $filename $working_directory/SOURCES_FOR_RUN_$fname
1630	fi
1631
1632	done
1633
1634	cd - > /dev/null
1635
1636	fi
1637
1638
1639	# PRUEFEN, OB ENTWEDER HAUPTPROGRAMM VORHANDEN UND ES EVTL. IN DER
1640	# LISTE DER ZU UEBERSETZENDEN PROGRAMMTEILE MIT ENTHALTEN IST (WENN
1641	# NICHT, WIRD ES DIESER LISTE HINZUGEFUEGT)
1642	if [[ $restart_run != true ]]
1643	then
1644
1645	if [[ ! -f "$source_path/$mainprog" ]]
1646	then
1647	printf "\n\n +++ main program: $mainprog"
1648	printf "\n does not exist in source directory"
1649	printf "\n \"$source_path\"\n"
1650	locat=source; exit
1651	else
1652	if [[ $(echo $source_list \| grep -c $mainprog) = 0 ]]
1653	then
1654	cp $source_path/$mainprog SOURCES_FOR_RUN_$fname
1655	source_list=${mainprog}" $source_list"
1656	fi
1657	fi
1658	fi
1659
1660
1661	# MAKEFILE AUF VORHANDENSEIN PRUEFEN UND KOPIEREN
1662	# BEI RESTART-LAEUFEN LIEGT ES SCHON IM VERZEICHNIS SOURCES_FOR_RUN...
1663	if [[ "$restart_run" != true ]]
1664	then
1665	[[ "$makefile" = "" ]] && makefile=$source_path/Makefile
1666	if [[ ! -f $makefile ]]
1667	then
1668	printf "\n +++ file \"$makefile\" does not exist"
1669	locat=make; exit
1670	else
1671	cp $makefile SOURCES_FOR_RUN_$fname/Makefile
1672	fi
1673	fi
1674
1675
1676	# DATEIEN AUS ZUSAETZLICHEM QUELLVERZEICHNIS HINZUFUEGEN
1677	if [[ $restart_run != true && "$add_source_path" != "" ]]
1678	then
1679
1680	# GIBT ES DAS VERZEICHNIS UEBERHAUPT?
1681	if [[ ! -d $add_source_path ]]
1682	then
1683	printf "\n\n +++ WARNING: additional source code directory"
1684	printf "\n \"$add_source_path\" "
1685	printf "\n does not exist or is not a directory."
1686	printf "\n No source code will be used from this directory!\n"
1687	add_source_path=""
1688	sleep 3
1689	else
1690
1691	cd $add_source_path
1692	found=false
1693
1694	Names=$(ls -1 *.f90 2>&1)
1695	[[ $(echo $Names \| grep -c '*.f90') = 0 ]] && AddFilenames="$Names"
1696	Names=$(ls -1 *.F90 2>&1)
1697	[[ $(echo $Names \| grep -c '*.F90') = 0 ]] && AddFilenames="$AddFilenames $Names"
1698	Names=$(ls -1 *.F 2>&1)
1699	[[ $(echo $Names \| grep -c '*.F') = 0 ]] && AddFilenames="$AddFilenames $Names"
1700	Names=$(ls -1 *.f 2>&1)
1701	[[ $(echo $Names \| grep -c '*.f') = 0 ]] && AddFilenames="$AddFilenames $Names"
1702	Names=$(ls -1 *.c 2>&1)
1703	[[ $(echo $Names \| grep -c '*.c') = 0 ]] && AddFilenames="$AddFilenames $Names"
1704
1705	cd - > /dev/null
1706	cd SOURCES_FOR_RUN_$fname
1707
1708	# COPY MAKEFILE IF EXISTING
1709	if [[ -f $add_source_path/Makefile ]]
1710	then
1711	printf "\n\n *** user Makefile from directory"
1712	printf "\n \"$add_source_path\" is used \n"
1713	sleep 1
1714	cp $add_source_path/Makefile .
1715	fi
1716
1717	for dateiname in $AddFilenames
1718	do
1719	if [[ -f $dateiname ]]
1720	then
1721	printf "\n +++ source code file \"$dateiname\" found in additional"
1722	printf "\n source code directory \"$add_source_path\" "
1723	printf "\n but was also given with option \"-s\" which means that it should be taken"
1724	printf "\n from directory \"$source_path\"."
1725	locat=source; exit
1726	fi
1727
1728	cp $add_source_path/$dateiname .
1729	source_list="$source_list $dateiname"
1730
1731	# CHECK IF FILE IS CONTAINED IN MAKEFILE
1732	if [[ $(grep -c $dateiname Makefile) = 0 ]]
1733	then
1734	printf "\n\n +++ user file \"$dateiname\" "
1735	printf "\n is not listed in Makefile \n"
1736	locat=source; exit
1737	else
1738
1739	# Default User-Interface von der Liste entfernen, falls Datei
1740	# ein User-Interface enthaelt
1741	# if [[ $( cat $dateiname \| grep -c "END SUBROUTINE user_parin" ) != 0 ]]
1742	# then
1743	# if [[ $dateiname != user_interface.f90 && -f user_interface.f90 ]]
1744	# then
1745	# rm -rf user_interface.f90
1746	# source_list=`echo $source_list \| sed -e 's/user_interface.f90//'`
1747	# printf "\n\n *** default \"user_interface.f90\" removed from the files to be translated"
1748	# printf "\n since a user-interface is found in file"
1749	# printf "\n \"$add_source_path/$dateiname\" \n"
1750	# sleep 3
1751	# else
1752	if [[ $found = false ]]
1753	then
1754	found=true
1755	printf "\n\n *** following user file(s) added to the"
1756	printf " files to be translated:\n "
1757	fi
1758	printf "$dateiname "
1759	sleep 0.5
1760	fi
1761	done
1762	[[ $found = true ]] && printf "\n"
1763	cd - > /dev/null
1764	fi
1765	fi
1766
1767
1768	# ALLE UNTERPROGRAMME, DIE ZU VEREINBARTEN SOFTWAREPAKETEN GEHOEREN,
1769	# DER LISTE DER ZU UEBERSETZENDEN DATEIEN HINZUFUEGEN
1770	if [[ $restart_run != true && -n $package_list ]]
1771	then
1772
1773	cd $source_path
1774
1775	for package in $package_list
1776	do
1777
1778	[[ $package = "dvrp_graphics+1PE" ]] && package=dvrp_graphics
1779
1780	# ERMITTELE ALLE DATEIEN, DIE ZUM PAKET GEHOEREN
1781	# FEHLERMELDUNGEN WERDEN ABGEFANGEN, DA * AUCH VERZEICHNISSNAMEN
1782	# LIEFERT
1783	package_source_list=`grep "defined( __$package " * 2>/dev/null \| cut -f1 -d:`
1784
1785
1786	# FUEGE DIESE DATEIEN DER LISTE DER ZU UEBERSETZENDEN DATEIEN
1787	# HINZU, FALLS SIE NOCH NICHT DAZUGEHOEREN
1788	for source_list_name in $package_source_list
1789	do
1790	if [[ $(echo $source_list \| grep -c $source_list_name) = 0 ]]
1791	then
1792
1793	# NUR DATEIEN MIT GUELTIGEN ENDUNGEN VERWENDEN
1794	ending=`echo $source_list_name \| cut -f2 -d.`
1795	if [[ "$ending" = f90 \|\| "$ending" = F90 \|\| "$ending" = f \|\| "$ending" = F \|\| "$ending" = c ]]
1796	then
1797	cp $source_list_name $working_directory/SOURCES_FOR_RUN_$fname
1798	source_list="$source_list $source_list_name"
1799	fi
1800	fi
1801	done
1802	done
1803
1804	cd - > /dev/null
1805	fi
1806
1807
1808	# MAKEFILE AUF VORHANDENSEIN PRUEFEN UND KOPIEREN
1809	# BEI RESTART-LAEUFEN LIEGT ES SCHON IM VERZEICHNIS SOURCES_FOR_RUN...
1810	# if [[ "$restart_run" != true ]]
1811	# then
1812	# [[ "$makefile" = "" ]] && makefile=$source_path/Makefile
1813	# if [[ ! -f $makefile ]]
1814	# then
1815	# printf "\n +++ file \"$makefile\" does not exist"
1816	# locat=make; exit
1817	# else
1818	# cp $makefile SOURCES_FOR_RUN_$fname/Makefile
1819	# fi
1820	# fi
1821
1822	fi # do_compile=true
1823
1824
1825	# FALLS PROGRAMMTEILE UEBERSETZT WERDEN SOLLEN, FOLGEN JETZT EINIGE
1826	# UEBERPRUEFUNGEN UND DAS SETZEN DER PRAEPROZESSOR-DIREKTIVEN
1827	if [[ $do_compile = true ]]
1828	then
1829
1830	# PRAEPROZESSOR-DIREKTIVEN ZUM SELEKTIVEN AUSWAEHLEN VON CODETEILEN
1831	# ZUSAMMENSETZEN
1832	# DIREKTIVEN ZUM AKTIVIEREN VON RECHNERSPEZIFISCHEM CODE
1833	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1834	then
1835	cpp_options="${cpp_options},-D__ibm=__ibm"
1836	elif [[ $(echo $localhost \| cut -c1-3) = nec ]]
1837	then
1838	cpp_options="$cpp_options -D__nec"
1839	elif [[ $(echo $localhost \| cut -c1-2) = lc ]]
1840	then
1841	cpp_options="$cpp_options -D__lc"
1842	else
1843	cpp_options="$cpp_options -D__$localhost"
1844	fi
1845
1846	# DIREKTIVEN DIE DURCH OPTION -K BESTIMMT WERDEN (Z.B. PARALLEL)
1847	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1848	then
1849	[[ -n $cond1 ]] && cpp_options="${cpp_options},-D__$cond1=__$cond1"
1850	[[ -n $cond2 ]] && cpp_options="${cpp_options},-D__$cond2=__$cond2"
1851	else
1852	[[ -n $cond1 ]] && cpp_options="$cpp_options -D__$cond1"
1853	[[ -n $cond2 ]] && cpp_options="$cpp_options -D__$cond2"
1854	fi
1855
1856	# DIREKTIVEN DIE SOFTWAREPAKETE AKTIVIEREN (OPTION -p)
1857	if [[ -n $package_list ]]
1858	then
1859	for package in $package_list
1860	do
1861	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1862	then
1863	if [[ $package != "dvrp_graphics+1PE" ]]
1864	then
1865	cpp_options="${cpp_options},-D__$package=__$package"
1866	else
1867	cpp_options="${cpp_options},-D__dvrp_graphics=__dvrp_graphics"
1868	export use_seperate_pe_for_dvrp_output=true
1869	fi
1870	else
1871	if [[ $package != "dvrp_graphics+1PE" ]]
1872	then
1873	cpp_options="$cpp_options -D__$package"
1874	else
1875	cpp_options="$cpp_options -D__dvrp_graphics"
1876	export use_seperate_pe_for_dvrp_output=true
1877	fi
1878	fi
1879	done
1880	fi
1881
1882	# DIREKTIVEN DIE DURCH OPTION -D FESTGELEGT SIND
1883	if [[ -n $cpp_opts ]]
1884	then
1885	for popts in $cpp_opts
1886	do
1887	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1888	then
1889	cpp_options="${cpp_options},-D__$popts=__$popts"
1890	else
1891	cpp_options="$cpp_options -D__$popts"
1892	fi
1893	done
1894	fi
1895
1896	else
1897
1898
1899	# BEI LOKALEN RECHNUNGEN PRUEFEN, OB EXECUTABLE VORHANDEN
1900	if [[ $do_remote = false ]]
1901	then
1902	if [[ ! -f $executable ]]
1903	then
1904	printf "\n +++ executable file: $executable"
1905	printf "\n does not exist"
1906	locat=executable; exit
1907	fi
1908	fi
1909	fi
1910
1911
1912	# JOBMODUS FESTSTELLEN
1913	if [[ "$ENVIRONMENT" = BATCH && $localhost != lctit \|\| "$QUEUE" != interactive && $localhost = lctit ]]
1914	then
1915	jobmo=BATCH
1916	else
1917	jobmo=INTERACTIVE
1918	fi
1919
1920
1921	# HOSTSPEZIFISCHE DEFAULT-COMPILER SETZEN, FALLS NICHT BEREITS
1922	# DURCH BENUTZER ANDERWEITIG VEREINBART
1923	if [[ "$compiler_name" = "" ]]
1924	then
1925
1926	printf "\n +++ no compiler specified for \"$host $cond1 $cond2\""
1927	locat=compiler_name; exit
1928
1929	fi
1930
1931
1932	# COMPILER AUF RIAMS NEC UEBERSCHREIBEN
1933	[[ $localhost = necriam ]] && compiler_name=mpif90
1934
1935
1936
1937	# TEMPORAEREN KATALOGNAMEN BESTIMMEN
1938	kennung=$RANDOM
1939	if [[ "$tmp_user_catalog" = "" ]]
1940	then
1941	if [[ $localhost = ibmh ]]
1942	then
1943	tmp_user_catalog=$SCRATCH
1944	elif [[ $localhost = nech ]]
1945	then
1946	tmp_user_catalog=$WRKSHR
1947	else
1948	tmp_user_catalog=/tmp
1949	fi
1950	fi
1951	TEMPDIR=$tmp_user_catalog/${usern}.$kennung
1952
1953
1954	# KATALOGNAMEN FUER ZWISCHENSPEICHERUNG VON FORTSETZUNGSLAUFDATEIEN
1955	# BESTIMMEN
1956	if [[ "$tmp_data_catalog" = "" ]]
1957	then
1958	if [[ $localhost = ibmb ]]
1959	then
1960	tmp_data_catalog=$WORK/mrun_restart_data
1961	elif [[ $localhost = nech ]]
1962	then
1963	tmp_data_catalog=$WRKSHR/mrun_restart_data
1964	else
1965	tmp_data_catalog=/tmp/mrun_restart_data
1966	fi
1967	fi
1968
1969
1970	# EVENTUELL BEI LOKALEN RECHNUNGEN $-ZEICHEN IN ENVIRONMENT-VARIABLEN
1971	# ERSETZEN
1972	if [[ $do_remote = false && $do_compile = true ]]
1973	then
1974	eval fopts=\"$fopts\"
1975	eval lopts=\"$lopts\"
1976	fi
1977
1978
1979
1980	# COMPILE- UND LINK-OPTIONEN BESTIMMEN
1981	fopts="$fopts $netcdf_inc $dvr_inc"
1982	lopts="$lopts $netcdf_lib $dvr_lib"
1983	ROPTS="$ropts"
1984	if [[ ( $(echo $host \| cut -c1-3) = nec \|\| $(echo $host \| cut -c1-3) = ibm \|\| $host = lcsgih \|\| $host = lcsgib \|\| $host = lctit \|\| $host = lcfimm \|\| $host = lcxt4 ) && -n $numprocs ]]
1985	then
1986	XOPT="-X $numprocs"
1987	fi
1988
1989
1990
1991	# PRUEFEN DER CPU-ZEIT. (CPUMAX WIRD ALS ENV-VARIABLE VOM HAUTPRO-
1992	# GRAMM BENOETIGT
1993	done=false
1994	while [[ $done = false ]]
1995	do
1996	cputime=$cpumax
1997	if (( $cputime == 0 ))
1998	then
1999	if [[ $do_batch = true ]]
2000	then
2001	printf "\n +++ cpu-time is undefined"
2002	printf "\n >>> Please type CPU-time in seconds as INTEGER:"
2003	printf "\n >>> "
2004	read cputime 1>/dev/null 2>&1
2005	else
2006	cputime=10000000 # NO CPU LIMIT FOR INTERACTIVE RUNS
2007	fi
2008	else
2009	done=true
2010	fi
2011	cpumax=$cputime
2012	done
2013
2014	(( minuten = cputime / 60 ))
2015	(( sekunden = cputime - minuten * 60 ))
2016
2017
2018	# PRUEFEN DER KERNSPEICHERANFORDERUNG
2019	if [[ $do_batch = true ]]
2020	then
2021	done=false
2022	while [[ $done = false ]]
2023	do
2024	if (( memory == 0 ))
2025	then
2026	printf "\n +++ memory demand is undefined"
2027	printf "\n >>> Please type memory in MByte per process as INTEGER:"
2028	printf "\n >>> "
2029	read memory 1>/dev/null 2>&1
2030	else
2031	done=true
2032	fi
2033	done
2034	fi
2035
2036
2037	# PRUEFEN, OB FUER REMOTE-RECHNUNGEN EIN BENUTZERNAME ANGEGEBEN WURDE
2038	if [[ $do_remote = true && -z $remote_username ]]
2039	then
2040	while [[ -z $remote_username ]]
2041	do
2042	printf "\n +++ username on remote host \"$host\" is undefined"
2043	printf "\n >>> Please type username:"
2044	printf "\n >>> "
2045	read remote_username
2046	done
2047	mc="$mc -u$remote_username"
2048	fi
2049
2050
2051	# SET DEFAULT VALUE FOR MPI MODULE TO BE USED ON SGI-ALTIX
2052	if [[ $host = lcsgib \|\| $host = lcsgih ]]
2053	then
2054	[[ "$mpilib" = "" ]] && export mpilib=mpt
2055	fi
2056
2057
2058
2059	###########################################################################
2060	# HEADER-AUSGABE
2061	###########################################################################
2062
2063
2064	calltime=$(date)
2065	printf "\n"
2066	# [[ $silent = false ]] && clear
2067	printf "#--------------------------------------------------------------# \n"
2068	printf "\| $version$calltime \| \n"
2069	printf "\| \| \n"
2070	spalte1="called on:"; spalte2=$localhost_realname
2071	printf "\| $spalte1$spalte2 \| \n"
2072	if [[ $local_compile = false ]]
2073	then
2074	if [[ $do_remote = true ]]
2075	then
2076	spalte1="execution on:"; spalte2="$host (username: $remote_username)"
2077	else
2078	spalte1="execution on:"; spalte2="$host ($localhost_realname)"
2079	fi
2080	else
2081	spalte1="compiling test only!"; spalte2=""
2082	fi
2083	printf "\| $spalte1$spalte2 \| \n"
2084	if [[ -n $numprocs ]]
2085	then
2086	spalte1="number of PEs:"; spalte2=$numprocs
2087	printf "\| $spalte1$spalte2 \| \n"
2088	fi
2089	if [[ -n $tasks_per_node ]]
2090	then
2091	spalte1="tasks per node:"; spalte2="$tasks_per_node (number of nodes: $nodes)"
2092	printf "\| $spalte1$spalte2 \| \n"
2093	fi
2094	if [[ $threads_per_task != 1 ]]
2095	then
2096	spalte1="threads per task:"; spalte2="$threads_per_task"
2097	printf "\| $spalte1$spalte2 \| \n"
2098	fi
2099	printf "\| \| \n"
2100	if [[ $do_compile = true ]]
2101	then
2102	spalte1=cpp-directives:; spalte2=$cpp_options
2103	printf "\| $spalte1$spalte2 \| \n"
2104	zeile=$(echo "$cpp_options" \| cut -c41-)
2105	while [[ "$zeile" != "" ]]
2106	do
2107	spalte1=""
2108	spalte2=$zeile
2109	printf "\| $spalte1$spalte2 \| \n"
2110	zeile=$(echo "$zeile" \| cut -c41-)
2111	done
2112
2113	spalte1=compiler-options:; spalte2="$fopts"
2114	printf "\| $spalte1$spalte2 \| \n"
2115	zeile=$(echo "$fopts" \| cut -c41-)
2116	while [[ "$zeile" != "" ]]
2117	do
2118	spalte1=""
2119	spalte2=$zeile
2120	printf "\| $spalte1$spalte2 \| \n"
2121	zeile=$(echo "$zeile" \| cut -c41-)
2122	done
2123
2124	spalte1=linker-options:; spalte2=$lopts
2125	printf "\| $spalte1$spalte2 \| \n"
2126	zeile=$(echo "$lopts" \| cut -c41-)
2127	while [[ "$zeile" != "" ]]
2128	do
2129	spalte1=""
2130	spalte2=$zeile
2131	printf "\| $spalte1$spalte2 \| \n"
2132	zeile=$(echo "$zeile" \| cut -c41-)
2133	done
2134
2135	spalte1="main program":; spalte2=$mainprog
2136	printf "\| $spalte1$spalte2 \| \n"
2137	else
2138	spalte1=executable:; spalte2=$executable
2139	printf "\| $spalte1$spalte2 \| \n"
2140	fi
2141	printf "\| \| \n"
2142	spalte1="base name of files":; spalte2=$fname
2143	printf "\| $spalte1$spalte2 \| \n"
2144	if [[ $fname != $afname ]]
2145	then
2146	spalte1="base name of input files":; spalte2=$afname
2147	printf "\| $spalte1$spalte2 \| \n"
2148	fi
2149	spalte1="INPUT control list":; spalte2=$input_list
2150	printf "\| $spalte1$spalte2 \| \n"
2151	spalte1="OUTPUT control list":; spalte2=$output_list
2152	printf "\| $spalte1$spalte2 \| \n"
2153
2154	if [[ $do_batch = true \|\| "$LOADLBATCH" = yes ]]
2155	then
2156	spalte1="memory demand / PE":; spalte2="$memory MB"
2157	printf "\| $spalte1$spalte2 \| \n"
2158	spalte1=CPU-time:; spalte2="$minuten:$sekunden"
2159	printf "\| $spalte1$spalte2 \| \n"
2160	fi
2161
2162	if [[ $do_compile = true ]]
2163	then
2164	printf "\| \| \n"
2165	printf "\| Files to be compiled: \| \n"
2166	zeile=$source_list
2167	while [[ "$zeile" != "" ]]
2168	do
2169	spalte3=$zeile
2170	printf "\| $spalte3 \| \n"
2171	zeile=$(echo "$zeile" \| cut -c61-)
2172	done
2173	fi
2174	printf "#--------------------------------------------------------------#"
2175
2176
2177
2178	# BEDINGTE AUSGABE DER DATEIVERBINDUNGEN
2179	if [[ $do_trace = true ]]
2180	then
2181	(( i = 0 ))
2182	while (( i < iin ))
2183	do
2184	(( i = i + 1 ))
2185	if (( i == 1 ))
2186	then
2187	printf "\n\n >>> INPUT-file assignments:\n"
2188	fi
2189	printf "\n ${localin[$i]} : ${absnamein[$i]}"
2190	done
2191	(( i = 0 ))
2192	while (( i < iout ))
2193	do
2194	(( i = i + 1 ))
2195	if (( i == 1 ))
2196	then
2197	printf "\n\n >>> OUTPUT-file assignments:\n"
2198	fi
2199	printf "\n ${localout[$i]} : ${pathout[$i]}"
2200	done
2201	(( i = 0 ))
2202	while (( i < iic ))
2203	do
2204	(( i = i + 1 ))
2205	if (( i == 1 ))
2206	then
2207	printf "\n\n >>> INPUT-commands:\n"
2208	fi
2209	printf "\n ${in_command[$i]}"
2210	done
2211	(( i = 0 ))
2212	while (( i < ioc ))
2213	do
2214	(( i = i + 1 ))
2215	if (( i == 1 ))
2216	then
2217	printf "\n\n >>> OUTPUT-commands:\n"
2218	fi
2219	printf "\n ${out_command[$i]}"
2220	done
2221	fi
2222
2223
2224	# ABFRAGEN BEI AUFRUF AUF LOKALER MASCHINE
2225	if [[ $remotecall = false && $silent = false && $jobmo != BATCH ]]
2226	then
2227	antwort=dummy
2228	printf "\n\n"
2229	while [[ "$antwort" != y && "$antwort" != Y && "$antwort" != n && "$antwort" != N ]]
2230	do
2231	printf " >>> everything o.k. (y/n) ? "
2232	read antwort
2233	done
2234	if [[ $antwort = n \|\| $antwort = N ]]
2235	then
2236	locat=user_abort; (( iec = 0 )); exit
2237	fi
2238	if [[ $do_batch = true ]]
2239	then
2240	printf " >>> batch-job will be created and submitted"
2241	else
2242	if [[ $local_compile = false ]]
2243	then
2244	printf " >>> MRUN will now continue to execute on this machine"
2245	else
2246	printf " >>> a test compilation will now be carried out on this machine"
2247	fi
2248	fi
2249	fi
2250
2251
2252
2253
2254	# FALLS AUF DIESER MASCHINE GERECHNET WERDEN SOLL, WERDEN JETZT ENTSPRE-
2255	# CHENDE AKTIONEN DURCHGEFUEHRT
2256	if [[ $do_batch = false ]]
2257	then
2258
2259
2260	# TEMPORAEREN KATALOG ERZEUGEN
2261	mkdir -p $TEMPDIR
2262	chmod go+rx $TEMPDIR
2263	tmpcreate=true
2264
2265
2266	# SAEMTLICHE QUELLTEXT-DATEIEN BZW. AUSFUEHRBARES PROGRAMM IN
2267	# TEMPORAERES VERZEICHNIS KOPIEREN
2268	if [[ $do_compile = true ]]
2269	then
2270
2271	# ON NEC, COMPILATION IS DONE ON HOST CROSS VIA CROSS COMPILING
2272	# CREATE A TEMPORARY DIRECTORY ON THAT MACHINE (HOME MOUNTED VIA NFS)
2273	if [[ $localhost = nech ]]
2274	then
2275	TEMPDIR_COMPILE=$HOME/work/${usern}.$kennung
2276	if mkdir -p $TEMPDIR_COMPILE
2277	then
2278	printf "\n *** \"$TEMPDIR_COMPILE\" "
2279	printf "\n is generated as temporary directory for cross compiling\n"
2280	else
2281	printf "\n +++ creating directory \"$TEMPDIR_COMPILE\" "
2282	printf "\n needed for cross compilation failed"
2283	locat=compile
2284	exit
2285	fi
2286	else
2287	TEMPDIR_COMPILE=$TEMPDIR
2288	fi
2289
2290
2291	# PFADNAMEN FUER DAS MAKE-DEPOSITORY ERMITTELN
2292	line=""
2293	grep "%depository_path" $config_file > tmp_mrun
2294	while read line
2295	do
2296	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
2297	then
2298	if [[ "$(echo $line \| cut -d" " -s -f3)" = "" ]]
2299	then
2300	global_depository_path=`echo $line \| cut -d" " -s -f2`
2301	fi
2302	fi
2303	done < tmp_mrun
2304
2305	line=""
2306	grep " $localhost" $config_file \| grep "%depository_path" > tmp_mrun
2307	while read line
2308	do
2309	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
2310	then
2311	if [[ "$(echo $line \| cut -d" " -s -f4)" = "$cond1" && "$(echo $line \| cut -d" " -s -f5)" = "$cond2" ]]
2312	then
2313	local_depository_path=`echo $line \| cut -d" " -s -f2`
2314	fi
2315	fi
2316	done < tmp_mrun
2317
2318	if [[ "$local_depository_path" = "" ]]
2319	then
2320	if [[ "$global_depository_path" != "" ]]
2321	then
2322	local_depository_path=$global_depository_path
2323	else
2324	printf "\n\n +++ no depository path found in configuration file"
2325	printf "\n for local host \"$localhost\" "
2326	printf "\n please set \"\%depository_path\" in configuration file\n"
2327	locat=config_file; exit
2328	fi
2329	fi
2330	eval local_depository_path=$local_depository_path
2331	[[ "$cond1" != "" ]] && local_depository_path=${local_depository_path}_$cond1
2332	[[ "$cond2" != "" ]] && local_depository_path=${local_depository_path}_$cond2
2333
2334
2335	basename=`print $mainprog \| cut -f1 -d"."`
2336	eval make_depository=${local_depository_path}/${basename}_current_version.tar
2337	if [[ ! -f $make_depository ]]
2338	then
2339	printf "\n"
2340	printf "\n *** WARNING: make depository \"$make_depository\" not found"
2341	printf "\n \"make\" will fail, if the Makefile or other source files are missing\n"
2342	else
2343	cp $make_depository $TEMPDIR_COMPILE
2344	cd $TEMPDIR_COMPILE
2345	tar -xf $make_depository > /dev/null 2>&1
2346	cd - > /dev/null
2347	fi
2348
2349	cp SOURCES_FOR_RUN_$fname/* $TEMPDIR_COMPILE
2350
2351	# FALLS USER-INTERFACE VORHANDEN UND AUF DATEI MIT ANDEREM NAMEN
2352	# ALS user_interface.f90 LIEGT, DIESEN GEAENDERTEN NAMEN INS
2353	# MAKEFILE EINTRAGEN
2354	# cd $TEMPDIR_COMPILE
2355	# interface_file=`grep -l "END SUBROUTINE user_parin" $source_list`
2356	# if [[ "$interface_file" != "" ]]
2357	# then
2358	# interface_file=`echo $interface_file \| cut -d"." -f1`
2359	# mv Makefile Makefile_old
2360	# sed "s/user_interface/$interface_file/g" Makefile_old > Makefile
2361	# fi
2362	# cd - > /dev/null
2363	else
2364	cp $executable ${TEMPDIR}/a.out
2365	fi
2366
2367
2368	# WECHSEL IN TEMPORAEREN KATALOG
2369	cd $TEMPDIR
2370	printf "\n *** changed to temporary directory: $TEMPDIR"
2371
2372
2373	# OUTPUT-DATEI-VERBINDUNGEN AUF TEMPORAERER DATEI ABLEGEN
2374	# DIESE DATEI KANN VON SPAETER AUFZURUFENDEN BENUTZERPROZEDUREN GELESEN
2375	# WERDEN, UM ZU LOKALEN DATEINAMEN GEHOERENDE PERMANENTE NAMEN ZU
2376	# ERMITTELN
2377	(( i = 0 ))
2378	while (( i < iout ))
2379	do
2380	(( i = i + 1 ))
2381	if [[ "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = tra \|\| "${actionout[$i]}" = trpe ]]
2382	then
2383	printf "${localout[$i]} ${actionout[$i]}\n${pathout[$i]}\n${localhost}_${fname}${endout[$i]}\n" >> OUTPUT_FILE_CONNECTIONS
2384	else
2385	printf "${localout[$i]} ${actionout[$i]}\n${pathout[$i]}\n${frelout[$i]}\n" >> OUTPUT_FILE_CONNECTIONS
2386	fi
2387	done
2388
2389
2390	# EVTL. UEBERSETZUNGSAKTIONEN STARTEN
2391	if [[ $do_compile = true ]]
2392	then
2393
2394
2395	# COMPILING WITH MAKE (ON NEC COMPILER IS CALLED ON HOST CROSS)
2396	printf "\n\n\n *** compilation starts \n$striche\n"
2397	printf " *** compilation with make using following options:\n"
2398	printf " make depository: $make_depository"
2399	printf " compilername: $compiler_name\n"
2400	printf " options: $fopts\n"
2401	printf " preprocessor-directives: $cpp_options \n"
2402	printf " linker-options: $lopts \n"
2403	printf " source code files: $source_list \n"
2404
2405	if [[ $localhost = nech ]]
2406	then
2407	ssh 136.172.44.192 -l $usern ". /SX/opt/etc/initsx.sh; cd \$HOME/work/${usern}.$kennung; sxmake -f Makefile PROG=a.out F90=$compiler_name COPT=\"$cpp_options\" F90FLAGS=\"$fopts\" LDFLAGS=\"$lopts\" "
2408	cp $TEMPDIR_COMPILE/a.out .
2409	[[ $? != 0 ]] && compile_error=true
2410	rm -rf $TEMPDIR_COMPILE
2411	elif [[ $localhost = ibmh ]]
2412	then
2413	printf " compiler is called via ssh on \"plogin1\" \n"
2414	ssh plogin1 -l $usern "export PATH=/sw/ibm/xlf/12.1.0.3/usr/bin:$PATH; cd $TEMPDIR; make -f Makefile PROG=a.out F90=$compiler_name COPT=\"$cpp_options\" F90FLAGS=\"$fopts\" LDFLAGS=\"$lopts\" "
2415	[[ ! -f a.out ]] && compile_error=true
2416	continue # ANDERENFALLS IST STATUS=1, FALLS A.OUT VORHANDEN
2417	elif [[ $localhost = lcsgib ]]
2418	then
2419	printf " compiler is called via ssh on \"bicegate\" using module \"$mpilib\" \n"
2420	ssh 130.73.232.103 -l $usern ". /usr/share/modules/init/bash; module load $mpilib; cd $TEMPDIR; make -f Makefile PROG=a.out F90=$compiler_name COPT=\"$cpp_options\" F90FLAGS=\"$fopts\" LDFLAGS=\"$lopts\" "
2421	[[ ! -f a.out ]] && compile_error=true
2422	continue # ANDERENFALLS IST STATUS=1, FALLS A.OUT VORHANDEN
2423	elif [[ $localhost = lcsgih ]]
2424	then
2425	printf " compiler is called via ssh on \"hicegate2\" using module \"$mpilib\" \n"
2426	ssh 130.75.4.103 -l $usern ". /usr/share/modules/init/bash; module load $mpilib; cd $TEMPDIR; make -f Makefile PROG=a.out F90=$compiler_name COPT=\"$cpp_options\" F90FLAGS=\"$fopts\" LDFLAGS=\"$lopts\" 2>&1 "
2427	[[ ! -f a.out ]] && compile_error=true
2428	continue # ANDERENFALLS IST STATUS=1, FALLS A.OUT VORHANDEN
2429	else
2430	[[ $localhost = lctit ]] && export LM_LICENSE_FILE=27050@tggls
2431	make -f Makefile PROG=a.out F90=$compiler_name COPT="$cpp_options" F90FLAGS="$fopts" LDFLAGS="$lopts"
2432	fi
2433
2434	if [[ $? != 0 \|\| "$compile_error" = true \|\| "$module_compile_error" = true ]]
2435	then
2436	printf "\n +++ error occured while compiling or linking"
2437	locat=compile
2438
2439	# WORKAROUND: REMOVE IF CONSTRUCT LATER, BUT KEEP THE EXIT!
2440	# if [[ $localhost != lcsgib && $localhost != lcsgih ]]
2441	# then
2442	exit
2443	# else
2444	# locat=normal
2445	# fi
2446	else
2447	printf "$striche\n *** compilation finished \n"
2448	fi
2449	fi
2450
2451
2452	# FALLS NUR TESTWEISE KOMPILIERT WERDEN SOLLTE, IST MRUN JETZT FERTIG
2453	if [[ $local_compile = true ]]
2454	then
2455	cd $HOME
2456	rm -rf $TEMPDIR
2457	locat=local_compile; exit
2458	fi
2459
2460
2461	# BEREITSTELLEN DER INPUT-DATEIEN
2462	# SCHLEIFE UEBER ALLE VOM BENUTZER ANGEGEBENEN DATEIEN
2463	(( i = 0 ))
2464	while (( i < iin ))
2465	do
2466	(( i = i + 1 ))
2467	if (( i == 1 ))
2468	then
2469	printf "\n\n *** providing INPUT-files:\n$striche"
2470	fi
2471
2472
2473	# OPTIONALE DATEIEN BEI NICHTVORHANDENSEIN UEBERGEHEN
2474	if [[ "${transin[$i]}" = unavailable ]]
2475	then
2476	if [[ "${extin[$i]}" = "" \|\| "${extin[$i]}" = " " ]]
2477	then
2478	printf "\n +++ WARNING: input file \"${pathin[$i]}/${afname}${endin[$i]}\" "
2479	printf "\n is not available!"
2480	else
2481	printf "\n +++ WARNING: input file \"${pathin[$i]}/${afname}${endin[$i]}.${extin[$i]}\" "
2482	printf "\n is not available!"
2483	fi
2484	continue
2485	fi
2486
2487	# PRUEFEN, OB EINZELDATEI ODER DATEI PRO PROZESSOR
2488	files_for_pes=false; datentyp=file
2489	if [[ "${actionin[$i]}" = pe && -n $numprocs ]]
2490	then
2491	files_for_pes=true; datentyp=directory
2492	actionin[$i]=""
2493	elif [[ "${actionin[$i]}" = pe && ! -n $numprocs ]]
2494	then
2495	actionin[$i]=""
2496	elif [[ "${actionin[$i]}" = arpe && -n $numprocs ]]
2497	then
2498	files_for_pes=true; datentyp=directory
2499	actionin[$i]="ar"
2500	elif [[ "${actionin[$i]}" = arpe && ! -n $numprocs ]]
2501	then
2502	actionin[$i]="ar"
2503	elif [[ "${actionin[$i]}" = flpe && -n $numprocs ]]
2504	then
2505	files_for_pes=true; datentyp=directory
2506	actionin[$i]="fl"
2507	elif [[ "${actionin[$i]}" = flpe && ! -n $numprocs ]]
2508	then
2509	actionin[$i]="fl"
2510	fi
2511
2512	if [[ $files_for_pes = true ]]
2513	then
2514	printf "\n >>> INPUT: ${absnamein[$i]}/.... to ${localin[$i]}"
2515	else
2516	printf "\n >>> INPUT: ${absnamein[$i]} to ${localin[$i]}"
2517	fi
2518
2519	# INPUT-DATEI FUER EINEN FORTSETZUNGSLAUF. ES WIRD GEPRUEFT,
2520	# OB DIESE DATEI NOCH AUF DEM TEMPORAEREN DATENKATALOG VORHANDEN
2521	# IST. FALLS NICHT, WIRD VERSUCHT, SIE ANSCHLIESSEND VOM ARCHIV-
2522	# SERVER ZU HOLEN
2523	if [[ "${actionin[$i]}" = fl ]]
2524	then
2525	printf "\n $datentyp will be fetched from temporary directory \"${tmp_data_catalog}\" !"
2526	if [[ $files_for_pes = false ]]
2527	then
2528	if [[ -f "$tmp_data_catalog/${frelin[$i]}" ]]
2529	then
2530	ln $tmp_data_catalog/${frelin[$i]} ${localin[$i]}
2531	got_tmp[$i]=true
2532	elif [[ -f "$WORK/${frelin[$i]}" && $ignore_archive_error = true ]]
2533	then
2534	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" !"
2535	printf "\n *** trying to use backup copy in \"$WORK\" "
2536	cp $WORK/${frelin[$i]} ${localin[$i]}
2537	else
2538	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" "
2539	printf "\n or \"$tmp_data_catalog\" does not exist!"
2540	printf "\n *** trying to get copy from archive"
2541	actionin[$i]=ar
2542	fi
2543	else
2544	if [[ -d "$tmp_data_catalog/${frelin[$i]}" ]]
2545	then
2546	mkdir ${localin[$i]}
2547	cd $tmp_data_catalog/${frelin[$i]}
2548	for file in $(ls *)
2549	do
2550	ln $file $TEMPDIR/${localin[$i]}
2551	done
2552	cd $TEMPDIR
2553	got_tmp[$i]=true
2554	elif [[ -d "$WORK/${frelin[$i]}" && $ignore_archive_error = true ]]
2555	then
2556	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" !"
2557	printf "\n *** trying to use backup copy in \"$WORK\" "
2558	cp -r $WORK/${frelin[$i]} ${localin[$i]}
2559	else
2560	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" "
2561	printf "\n or \"$tmp_data_catalog\" does not exist!"
2562	printf "\n *** trying to get copy from archive"
2563	actionin[$i]=ar
2564	fi
2565	fi
2566	fi
2567
2568
2569	# DATEI LIEGT AUF ARCHIV-SERVER
2570	if [[ "${actionin[$i]}" = ar ]]
2571	then
2572
2573	if [[ $files_for_pes = false ]]
2574	then
2575	printf "\n file will be restored from archive-system ($archive_system)!"
2576	else
2577	printf "\n directory will be restored from archive-system ($archive_system)!"
2578	fi
2579
2580	file_restored=false
2581
2582	if [[ $archive_system = asterix ]]
2583	then
2584	do_stagein=true
2585	(( stagein_anz = 0 ))
2586	while [[ $do_stagein = true ]]
2587	do
2588	if [[ $files_for_pes = false ]]
2589	then
2590	stagein -O ${frelin[$i]} > STAGEIN_OUTPUT
2591	else
2592	stagein -t -O ${frelin[$i]} > STAGEIN_OUTPUT
2593	fi
2594	cat STAGEIN_OUTPUT
2595	if [[ $(grep -c "st.msg:i24" STAGEIN_OUTPUT) != 0 ]]
2596	then
2597	file_restored=true
2598	do_stagein=false
2599	else
2600	(( stagein_anz = stagein_anz + 1 ))
2601	if (( stagein_anz == 10 ))
2602	then
2603	printf "\n +++ stagein stoped after 10 tries"
2604	locat=stage
2605	exit
2606	fi
2607	printf "\n +++ restoring from archive failed, trying again:"
2608	sleep 900
2609	fi
2610	done
2611	elif [[ $archive_system = DMF ]]
2612	then
2613	if [[ $files_for_pes = false ]]
2614	then
2615	printf "\n +++ restoring of single files impossible with $archive_system !\n"
2616	locat=DMF
2617	exit
2618	else
2619	find $ARCHIVE/${frelin[$i]} -type m -print \| dmget
2620	cp -r $ARCHIVE/${frelin[$i]} $PWD
2621	file_restored=true
2622	fi
2623	elif [[ $archive_system = tivoli ]]
2624	then
2625	if [[ $files_for_pes = false ]]
2626	then
2627	if [[ $localhost = ibmh ]]
2628	then
2629	ssh $usern@hdata.hlrn.de "cp $PERM/${frelin[$i]} $PWD"
2630	else
2631	ssh $usern@bdata.hlrn.de "cp $PERM/${frelin[$i]} $PWD"
2632	fi
2633	else
2634	(( inode = 0 ))
2635	while (( inode < nodes ))
2636	do
2637	if [[ $localhost = ibmh ]]
2638	then
2639	ssh $usern@hdata.hlrn.de "cd $PWD; tar xf $PERM/${frelin[$i]}/${frelin[$i]}.node_$inode.tar"
2640	else
2641	ssh $usern@bdata.hlrn.de "cd $PWD; tar xf $PERM/${frelin[$i]}/${frelin[$i]}.node_$inode.tar"
2642	fi
2643	(( inode = inode + 1 ))
2644	done
2645	fi
2646	file_restored=true
2647	elif [[ $archive_system = ut ]]
2648	then
2649	if [[ $files_for_pes = false ]]
2650	then
2651	cp $UT/${frelin[$i]} .
2652	else
2653	(( inode = 0 ))
2654	while (( inode < nodes ))
2655	do
2656	tar xf $UT/${frelin[$i]}/${frelin[$i]}.node_$inode.tar
2657	(( inode = inode + 1 ))
2658	done
2659	fi
2660	file_restored=true
2661	else
2662	printf "\n +++ archive_system=\"$archive_system\" restore impossible!"
2663	locat=rearchive
2664	exit
2665	fi
2666
2667	if [[ $file_restored = true ]]
2668	then
2669
2670	# DATEI AUCH AUF TEMPORAERES DATENVERZEICHNIS LEGEN, DAMIT
2671	# SIE BEI WEITEREN ZUGRIFFEN NOCH VORHANDEN IST
2672	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog; chmod g+rx $tmp_data_catalog
2673	if [[ $files_for_pes = false ]]
2674	then
2675	ln -f ${frelin[$i]} $tmp_data_catalog/${frelin[$i]}
2676	else
2677	mkdir $tmp_data_catalog/${frelin[$i]}
2678	ln -f ${frelin[$i]}/* $tmp_data_catalog/${frelin[$i]}
2679	fi
2680	got_tmp[$i]=true
2681
2682	# DATEI UNTER LOKALEM NAMEN ZUR VERFUEGUNG STELLEN
2683	mv ${frelin[$i]} ${localin[$i]}
2684
2685	fi
2686	fi
2687
2688
2689	# DATEI LIEGT IM VOM BENUTZER ANGEGEBENEN VERZEICHNIS
2690	if [[ "${actionin[$i]}" = "" \|\| "${actionin[$i]}" = "di" \|\| "${actionin[$i]}" = "npe" ]]
2691	then
2692
2693	if [[ "${actionin[$i]}" = "npe" && -n $numprocs ]]
2694	then
2695
2696	# DATEI WIRD FUER DIE PROZESSOREN EINES PARALLERECHNERS BEREITGESTELLT
2697	printf "\n file will be provided for $numprocs processors"
2698	mkdir ${localin[$i]}
2699	ival=$numprocs
2700	(( ii = 0 ))
2701	while (( ii <= ival-1 ))
2702	do
2703	if (( ii < 10 ))
2704	then
2705	cp ${absnamein[$i]} ${localin[$i]}/_000$ii
2706	elif (( ii < 100 ))
2707	then
2708	cp ${absnamein[$i]} ${localin[$i]}/_00$ii
2709	elif (( ii < 1000 ))
2710	then
2711	cp ${absnamein[$i]} ${localin[$i]}/_0$ii
2712	else
2713	cp ${absnamein[$i]} ${localin[$i]}/_$ii
2714	fi
2715	(( ii = ii + 1 ))
2716	done
2717
2718	else
2719
2720	if [[ $files_for_pes = true ]]
2721	then
2722
2723	# DIE DEN PROZESSOREN EINES PARALLELRECHNERS ZUGEHOERIGEN
2724	# DATEIEN WERDEN BEREITGESTELLT, INDEM ZUERST DER GESAMTE
2725	# KATALOGINHALT KOPIERT UND DANN DIE EINZELNEN DATEIEN
2726	# PER MOVE UMBENANNT WERDEN
2727	printf "\n providing $numprocs files for the respective processors"
2728	mkdir ${localin[$i]}
2729	if [[ $link_local_input = true ]]
2730	then
2731	printf " using ln -f\n"
2732	cd ${absnamein[$i]}
2733	for file in $(ls *)
2734	do
2735	ln -f $file ${localin[$i]}
2736	done
2737	cd $TEMPDIR
2738	fi
2739	# If "ln -f" fails of if "$link_local_input = false" do a normal "cp -r"
2740	if [[ ! -f "${localin[$i]}/_0000" ]]
2741	then
2742	if [[ $link_local_input = true ]]
2743	then
2744	printf " ln failed for .../_0000, using cp...\n"
2745	fi
2746	cp -r ${absnamein[$i]}/* ${localin[$i]}
2747	fi
2748
2749	else
2750	# BEREITSTELLUNG AUF EINPROZESSORRECHNERN
2751	if [[ $link_local_input = true ]]
2752	then
2753	printf " using ln -f\n"
2754	ln -f ${absnamein[$i]} ${localin[$i]}
2755	fi
2756	# If "ln -f" fails of if "$link_local_input = false" do a normal "cp"
2757	if [[ ! -f "${localin[$i]}" ]]
2758	then
2759	if [[ $link_local_input = true ]]
2760	then
2761	printf " ln failed, using cp...\n"
2762	fi
2763	cp ${absnamein[$i]} ${localin[$i]}
2764	fi
2765	fi
2766	fi
2767	fi
2768
2769	done
2770	if (( i != 0 ))
2771	then
2772	printf "\n$striche\n *** all INPUT-files provided \n"
2773	fi
2774
2775
2776	# EVENTUELLE INPUT-KOMMANDOS ABARBEITEN
2777	(( i = 0 ))
2778	while (( i < iic ))
2779	do
2780	(( i = i + 1 ))
2781	if (( i == 1 ))
2782	then
2783	printf "\n\n *** execution of INPUT-commands:\n$striche"
2784	fi
2785	printf "\n >>> ${in_command[$i]}"
2786	eval ${in_command[$i]}
2787	if (( i == iic ))
2788	then
2789	printf "\n$striche\n"
2790	fi
2791	done
2792
2793
2794	# VERBLEIBENDE CPU-ZEIT BERECHNEN
2795	cpurest=${cpumax}.
2796
2797
2798	# START DVR STREAMING SERVER
2799	if [[ $(echo $package_list \| grep -c dvrp_graphics) != 0 ]]
2800	then
2801	if [[ "$dvr_server" != "" ]]
2802	then
2803
2804	printf "\n\n *** preparing the dvr streaming server configuration file"
2805
2806	# Check, if a dvr server is already running
2807	running_dvrserver_id=`echo $(ps -edaf \| grep .dvrserver.config \| grep -v grep) \| cut -d" " -f2`
2808	if [[ "$running_dvrserver_id" != "" ]]
2809	then
2810
2811	printf "\n\n +++ WARNING: A dvr server with id=$running_dvrserver_id is already running!"
2812	printf "\n This server is used instead starting a new one!"
2813	printf "\n If required, script \"process_dvr_output\" has to be run manually."
2814
2815	else
2816
2817	# COPY CONFIGURATION FILE FOR STREAMING SERVER FROM REPOSITORY TO HERE
2818	if [[ -f ${PALM_BIN}/.dvrserver.config ]]
2819	then
2820	cp ${PALM_BIN}/.dvrserver.config .
2821
2822	# Entering the BASEDIR, UID and GID into this file
2823	user_id=`id -u`
2824	group_id=`id -g`
2825	# & is needed as seperator, because TEMPDIR contains /
2826	sed "s&<replace by dvr data directory>&${TEMPDIR}&g" .dvrserver.config > .dvrserver.1
2827	sed "s/<replace by user id>/$user_id/g" .dvrserver.1 > .dvrserver.2
2828	sed "s/<replace by group id>/$group_id/g" .dvrserver.2 > .dvrserver.3
2829	mv .dvrserver.3 .dvrserver.config
2830	rm .dvrserver.1 .dvrserver.2
2831
2832	# Start dvr server in background, get his id and print on terminal
2833	$dvr_server .dvrserver.config >> DVR_LOGFILE 2>&1 &
2834	dvrserver_id=`echo $(ps -edaf \| grep .dvrserver.config) \| cut -d" " -f2`
2835	printf "\n *** streaming server with id=$dvrserver_id is started in background"
2836	local_dvrserver_running=.TRUE.
2837	else
2838	printf "\n +++ missing file \".dvrserver.config\" in directory:"
2839	printf "\n \"$PALM_BIN\" "
2840	locat=dvr
2841	exit
2842	fi
2843
2844	fi
2845
2846	else
2847	printf "\n\n --- INFORMATIVE: no dvr streaming server will be started"
2848	fi
2849	fi
2850
2851
2852	# NAMELIST-DATEI MIT WERTEN VON ENVIRONMENT-VARIABLEN ERZEUGEN (ZU
2853	# LESEN VON PALM)
2854	cat > ENVPAR << %%END%%
2855	&envpar run_identifier = '$fname', host = '$localhost',
2856	write_binary = '$write_binary', tasks_per_node = $tasks_per_node,
2857	maximum_cpu_time_allowed = ${cpumax}.,
2858	revision = '$global_revision',
2859	local_dvrserver_running = $local_dvrserver_running /
2860
2861	%%END%%
2862
2863
2864	# PROGRAMMSTART
2865	printf "\n\n *** execution starts in directory\n \"`pwd`\"\n$striche\n"
2866	PATH=$PATH:$TEMPDIR
2867
2868	if [[ "$cond1" = debug \|\| "$cond2" = debug ]]
2869	then
2870	if [[ "$ENVIRONMENT" = BATCH ]]
2871	then
2872	if [[ $(echo $localhost \| cut -c1-5) != lcsgi ]]
2873	then
2874	printf "\n +++ debug is allowed in interactive mode only"
2875	locat=debug
2876	exit
2877	fi
2878	fi
2879	if [[ $localhost = decalpha ]]
2880	then
2881	dxladebug a.out
2882	elif [[ $localhost = ibmb \|\| $localhost = ibmh ]]
2883	then
2884
2885	# SETUP THE IBM MPI ENVIRONMENT
2886	export MP_SHARED_MEMORY=yes
2887	export AIXTHREADS_SCOPE=S
2888	export OMP_NUM_THREADS=$threads_per_task
2889	export AUTHSTATE=files
2890	export XLFRTEOPTS="nlwidth=132:err_recovery=no" # RECORD-LENGTH OF NAMELIST-OUTPUT
2891
2892	# FOLLOWING OPTIONS ARE MANDATORY FOR TOTALVIEW
2893	export MP_ADAPTER_USE=shared
2894	export MP_CPU_USE=multiple
2895	export MP_TIMEOUT=1200
2896
2897	unset MP_TASK_AFFINITY
2898
2899	# SO FAR, TOTALVIEW NEEDS HOSTFILE MECHANISM FOR EXECUTION
2900	#(( ii = 1 ))
2901	#while (( ii <= $numprocs ))
2902	#do
2903	# echo $localhost_realname >> hostfile
2904	# (( ii = ii + 1 ))
2905	#done
2906	#export MP_HOSTFILE=hostfile
2907
2908	if [[ "$LOADLBATCH" = yes ]]
2909	then
2910	totalview poe a.out $ROPTS
2911	else
2912	echo totalview poe -a a.out -procs $numprocs -rmpool 0 -nodes 1 $ROPTS
2913	export TVDSVRLAUNCHCMD=ssh
2914	totalview poe -a a.out -procs $numprocs -rmpool 0 -nodes 1 $ROPTS
2915	fi
2916	elif [[ $(echo $localhost \| cut -c1-5) = lcsgi ]]
2917	then
2918	# CURRENTLY NO DEBUGGER ON LCSGI
2919	if [[ $run_coupled_model = true ]]
2920	then
2921	printf "\n +++ no debug in coupled mode available on \"$localhost\" "
2922	locat=debug
2923	exit
2924	else
2925	echo "no_coupling" > runfile_atmos
2926	fi
2927	(( ii = $numprocs / $threads_per_task ))
2928	export OMP_NUM_THREADS=$threads_per_task
2929	echo "OMP_NUM_THREADS=$OMP_NUM_THREADS"
2930	if [[ $threads_per_task != 1 ]]
2931	then
2932	printf "\n threads per task: $threads_per_task"
2933	fi
2934	printf "\n\n"
2935	if [[ $( echo $mpilib \| cut -c1-3 ) = mpt ]]
2936	then
2937	# export MPI_LAUNCH_TIMEOUT=360
2938	if [[ "$totalview" = true ]]
2939	then
2940	printf "\n running totalview debugger"
2941	mpiexec_mpt -tv -n $ii ./a.out $ROPTS < runfile_atmos
2942	else
2943	mpiexec_mpt -np $ii ./a.out $ROPTS < runfile_atmos
2944	fi
2945	elif [[ $( echo $mpilib \| cut -c1-3 ) = mva ]]
2946	then
2947	# ulimit -s 300000 # A too large stack size causes problems
2948	# export MV2_NUM_PORTS=2
2949	# export MV2_CPU_MAPPING=0:1:2:3
2950	mpiexec ./a.out $ROPTS < runfile_atmos
2951	fi
2952	else
2953	printf "\n +++ no debug available on \"$localhost\" "
2954	printf "\n or not implemented in mrun so far"
2955	locat=debug
2956	exit
2957	fi
2958	else
2959	if [[ -n $numprocs ]]
2960	then
2961	# RUNNING THE PROGRAM ON PARALLEL MACHINES
2962	if [[ $(echo $host \| cut -c1-3) = ibm ]]
2963	then
2964	# SETUP THE IBM MPI ENVIRONMENT
2965	if [[ $host != ibmh ]]
2966	then
2967	export MP_SHARED_MEMORY=yes
2968	export AIXTHREAD_SCOPE=S
2969	export OMP_NUM_THREADS=$threads_per_task
2970	export XLSMPOPTS="spins=0:yields=0:stack=20000000"
2971	export AUTHSTATE=files
2972	export XLFRTEOPTS="nlwidth=132:err_recovery=no" # RECORD-LENGTH OF NAMELIST-OUTPUT
2973	# export MP_PRINTENV=yes
2974
2975	# TUNING-VARIABLEN ZUR VERBESSERUNG DER KOMMUNIKATION
2976	# ZEIGEN ABER DERZEIT (SEP 04, FEDERATION) KAUM WIRKUNG
2977	export MP_WAIT_MODE=poll
2978	[[ $node_usage = not_shared ]] && export MP_SINGLE_THREAD=yes
2979	fi
2980	if [[ "$LOADLBATCH" = yes ]]
2981	then
2982	printf "\n--- Control: OMP_NUM_THREADS = \"$OMP_NUM_THREADS\" \n"
2983	if [[ "$cond1" = hpmcount \|\| "$cond2" = hpmcount ]]
2984	then
2985	/opt/optibm/HPM_2_4_1/bin/hpmcount a.out $ROPTS
2986	else
2987	if [[ $run_coupled_model = false ]]
2988	then
2989	if [[ "$ocean_file_appendix" = true ]]
2990	then
2991	echo "precursor_ocean" > runfile_atmos
2992	else
2993	echo "precursor_atmos" > runfile_atmos
2994	fi
2995	else
2996	(( iia = $numprocs_atmos / $threads_per_task ))
2997	(( iio = $numprocs_ocean / $threads_per_task ))
2998	printf "\n coupled run ($iia atmosphere, $iio ocean)"
2999	printf "\n using $coupled_mode coupling"
3000	printf "\n\n"
3001	echo "coupled_run $iia $iio" > runfile_atmos
3002	fi
3003	poe ./a.out $ROPTS < runfile_atmos
3004	fi
3005	else
3006	if [[ $localhost = ibmb \|\| $localhost = ibmh \|\| $localhost = ibms ]]
3007	then
3008	poe a.out -procs $numprocs -nodes 1 -rmpool 0 $ROPTS
3009	elif [[ $localhost = ibmy ]]
3010	then
3011	if [[ -f $hostfile ]]
3012	then
3013	cp $hostfile hostfile
3014	else
3015	(( ii = 1 ))
3016	while (( ii <= $numprocs ))
3017	do
3018	echo $localhost_realname >> hostfile
3019	(( ii = ii + 1 ))
3020	done
3021	fi
3022	export MP_HOSTFILE=hostfile
3023	if [[ $run_coupled_model = false ]]
3024	then
3025	if [[ "$ocean_file_appendix" = true ]]
3026	then
3027	echo "precursor_ocean" > runfile_atmos
3028	else
3029	echo "precursor_atmos" > runfile_atmos
3030	fi
3031	else
3032	(( iia = $numprocs_atmos / $threads_per_task ))
3033	(( iio = $numprocs_ocean / $threads_per_task ))
3034	printf "\n coupled run ($iia atmosphere, $iio ocean)"
3035	printf "\n using $coupled_mode coupling"
3036	printf "\n\n"
3037	echo "coupled_run $iia $iio" > runfile_atmos
3038	fi
3039	./a.out -procs $tasks_per_node $ROPTS < runfile_atmos
3040
3041	else
3042	if [[ "$host_file" = "" ]]
3043	then
3044	printf "\n +++ no hostfile given in configuration file"
3045	locat=config_file
3046	exit
3047	else
3048	eval host_file=$host_file
3049	fi
3050	export MP_HOSTFILE=$host_file
3051	poe a.out -procs $numprocs -tasks_per_node $numprocs $ROPTS
3052	fi
3053	fi
3054	elif [[ $host = nech \|\| $host = necriam ]]
3055	then
3056	(( ii = nodes ))
3057	if [[ $ii = 1 ]]
3058	then
3059	export F_ERRCNT=0 # acceptable number of errors before program is stopped
3060	export MPIPROGINF=YES
3061	# export F_TRACE=YES\|FMT1\|FMT2 # output of ftrace informations to job protocol
3062	echo "*** execution on single node with mpirun"
3063	mpirun -np $numprocs ./a.out $ROPTS
3064	else
3065	(( i = 0 ))
3066	while (( i < ii ))
3067	do
3068	echo "-h $i -p $tasks_per_node -e ./mpi_exec_shell" >> multinode_config
3069	(( i = i + 1 ))
3070	done
3071
3072	echo "#!/bin/sh" > mpi_exec_shell
3073	echo " " >> mpi_exec_shell
3074	echo "set -u" >> mpi_exec_shell
3075	echo "F_ERRCNT=0" >> mpi_exec_shell
3076	echo "MPIPROGINV=YES" >> mpi_exec_shell
3077	echo "OMP_NUM_THREADS=$threads_per_task" >> mpi_exec_shell
3078	echo "cpurest=$cpurest" >> mpi_exec_shell
3079	echo "fname=$fname" >> mpi_exec_shell
3080	echo "localhost=$localhost" >> mpi_exec_shell
3081	echo "return_addres=$return_addres" >> mpi_exec_shell
3082	echo "return_username=$return_username" >> mpi_exec_shell
3083	echo "tasks_per_node=$tasks_per_node" >> mpi_exec_shell
3084	echo "write_binary=$write_binary" >> mpi_exec_shell
3085	echo "use_seperate_pe_for_dvrp_output=$use_seperate_pe_for_dvrp_output" >> mpi_exec_shell
3086	echo " " >> mpi_exec_shell
3087	echo "export F_ERRCNT" >> mpi_exec_shell
3088	echo "export MPIPROGINV" >> mpi_exec_shell
3089	echo "export OMP_NUM_THREADS" >> mpi_exec_shell
3090	echo "export cpurest" >> mpi_exec_shell
3091	echo "export fname" >> mpi_exec_shell
3092	echo "export localhost" >> mpi_exec_shell
3093	echo "export return_addres" >> mpi_exec_shell
3094	echo "export return_username" >> mpi_exec_shell
3095	echo "export tasks_per_node" >> mpi_exec_shell
3096	echo "export write_binary" >> mpi_exec_shell
3097	echo "export use_seperate_pe_for_dvrp_output" >> mpi_exec_shell
3098	echo " " >> mpi_exec_shell
3099	echo "exec ./a.out" >> mpi_exec_shell
3100
3101	chmod u+x mpi_exec_shell
3102	export MPIPROGINF=YES
3103	mpirun -f multinode_config &
3104	wait
3105
3106	fi
3107	elif [[ $(echo $host \| cut -c1-2) = lc && $host != lctit ]]
3108	then
3109
3110	# COPY HOSTFILE FROM SOURCE DIRECTORY OR CREATE IT, IF IT
3111	# DOES NOT EXIST
3112	if [[ $host != lcsgih && $host != lcsgib ]]
3113	then
3114	if [[ -f $hostfile ]]
3115	then
3116	cp $hostfile hostfile
3117	else
3118	(( ii = 1 ))
3119	while (( ii <= $numprocs / $threads_per_task ))
3120	do
3121	echo $localhost_realname >> hostfile
3122	(( ii = ii + 1 ))
3123	done
3124	fi
3125	eval zeile=\"`head -n $ii hostfile`\"
3126	printf "\n *** running on: $zeile"
3127	fi
3128
3129	(( ii = $numprocs / $threads_per_task ))
3130	export OMP_NUM_THREADS=$threads_per_task
3131	# echo "OMP_NUM_THREADS=$OMP_NUM_THREADS"
3132	if [[ $threads_per_task != 1 ]]
3133	then
3134	printf "\n threads per task: $threads_per_task"
3135	fi
3136	if [[ $run_coupled_model = false ]]
3137	then
3138	if [[ "$ocean_file_appendix" = true ]]
3139	then
3140	echo "precursor_ocean" > runfile_atmos
3141	else
3142	echo "precursor_atmos" > runfile_atmos
3143	fi
3144	printf "\n\n"
3145	if [[ $host = lcsgih \|\| $host = lcsgib ]]
3146	then
3147	if [[ $( echo $mpilib \| cut -c1-3 ) = mpt ]]
3148	then
3149	# export MPI_LAUNCH_TIMEOUT=360
3150	mpiexec_mpt -np $ii ./a.out $ROPTS < runfile_atmos
3151	elif [[ $( echo $mpilib \| cut -c1-3 ) = mva ]]
3152	then
3153	# ulimit -s 300000 # A too large stack size causes problems
3154	# export MV2_NUM_PORTS=2
3155	# export MV2_CPU_MAPPING=0:1:2:3
3156	mpiexec -np $ii ./a.out $ROPTS < runfile_atmos
3157	fi
3158	elif [[ $host = lcxt4 ]]
3159	then
3160	aprun -n $ii -N $tasks_per_node a.out $ROPTS < runfile_atmos
3161	else
3162	mpiexec -machinefile hostfile -n $ii a.out < runfile_atmos $ROPTS
3163	fi
3164	else
3165
3166	# currently there is no full MPI-2 support on ICE and XT4
3167	(( iia = $numprocs_atmos / $threads_per_task ))
3168	(( iio = $numprocs_ocean / $threads_per_task ))
3169	printf "\n coupled run ($iia atmosphere, $iio ocean)"
3170	printf "\n using $coupled_mode coupling"
3171	printf "\n\n"
3172
3173	if [[ $coupled_mode = "mpi2" ]]
3174	then
3175	echo "atmosphere_to_ocean $iia $iio" > runfile_atmos
3176	echo "ocean_to_atmosphere $iia $iio" > runfile_ocean
3177	if [[ $host = lcsgih \|\| $host = lcsgib ]]
3178	then
3179
3180	if [[ $( echo $mpilib \| cut -c1-3 ) = mpt ]]
3181	then
3182	# export MPI_LAUNCH_TIMEOUT=360
3183	mpiexec_mpt -np $iia ./a.out $ROPTS < runfile_atmos &
3184	mpiexec_mpt -np $iio ./a.out $ROPTS < runfile_ocean &
3185	elif [[ $( echo $mpilib \| cut -c1-3 ) = mva ]]
3186	then
3187	# ulimit -s 300000 # A too large stack size causes problems
3188	# export MV2_NUM_PORTS=2
3189	# export MV2_CPU_MAPPING=0:1:2:3
3190	mpiexec -n $iia ./a.out $ROPTS < runfile_atmos &
3191	mpiexec -n $iio ./a.out $ROPTS < runfile_ocean &
3192	fi
3193
3194	elif [[ $host = lcxt4 ]]
3195	then
3196
3197	aprun -n $iia -N $tasks_per_node a.out < runfile_atmos $ROPTS &
3198	aprun -n $iio -N $tasks_per_node a.out < runfile_ocean $ROPTS &
3199
3200	else
3201	# WORKAROUND BECAUSE mpiexec WITH -env option IS NOT AVAILABLE ON SOME SYSTEMS
3202	mpiexec -machinefile hostfile -n $iia a.out $ROPTS < runfile_atmos &
3203	mpiexec -machinefile hostfile -n $iio a.out $ROPTS < runfile_ocean &
3204	# mpiexec -machinefile hostfile -n $iia -env coupling_mode atmosphere_to_ocean a.out $ROPTS &
3205	# mpiexec -machinefile hostfile -n $iio -env coupling_mode ocean_to_atmosphere a.out $ROPTS &
3206	fi
3207	wait
3208
3209	else
3210
3211	echo "coupled_run $iia $iio" > runfile_atmos
3212	if [[ $host = lcsgih \|\| $host = lcsgib ]]
3213	then
3214
3215	if [[ $( echo $mpilib \| cut -c1-3 ) = mpt ]]
3216	then
3217	# export MPI_LAUNCH_TIMEOUT=360
3218	mpiexec_mpt -np $ii ./a.out $ROPTS < runfile_atmos
3219	elif [[ $( echo $mpilib \| cut -c1-3 ) = mva ]]
3220	then
3221	# ulimit -s 300000 # A too large stack size causes problems
3222	# export MV2_NUM_PORTS=2
3223	# export MV2_CPU_MAPPING=0:1:2:3
3224	mpiexec ./a.out $ROPTS < runfile_atmos
3225	fi
3226
3227	elif [[ $host = lcxt4 ]]
3228	then
3229
3230	aprun -n $ii -N $tasks_per_node a.out < runfile_atmos $ROPTS
3231
3232	fi
3233	wait
3234	fi
3235
3236	# if [[ $scirocco = true ]]
3237	# then
3238	# mpiexec -machinefile hostfile -n $ii a.out $ROPTS
3239	# else
3240	# mpirun -machinefile hostfile -np $ii a.out $ROPTS
3241	# fi
3242	fi
3243	elif [[ $host = decalpha ]]
3244	then
3245	dmpirun -np $numprocs a.out $ROPTS
3246	elif [[ $host = lctit ]]
3247	then
3248	export runfile=runfile.$kennung
3249
3250	echo "cd $PWD" > $runfile
3251	echo "export OMP_NUM_THREADS=$OMP_NUM_THREADS" >> $runfile
3252	echo "export cpurest=$cpurest" >> $runfile
3253	echo "export fname=$fname" >> $runfile
3254	echo "export localhost=$localhost" >> $runfile
3255	echo "export return_addres=$return_addres" >> $runfile
3256	echo "export return_username=$return_username" >> $runfile
3257	echo "export tasks_per_node=$tasks_per_node" >> $runfile
3258	echo "export write_binary=$write_binary" >> $runfile
3259	echo "export use_seperate_pe_for_dvrp_output=$use_seperate_pe_for_dvrp_output" >> $runfile
3260	echo "./a.out" >> $runfile
3261	chmod u+x $runfile
3262
3263	if [[ "$QUEUE" = interactive ]]
3264	then
3265	mpirun -np $numprocs a.out $ROPTS
3266	else
3267	(( mem_tsubame = $memory / 1024.0 ))
3268	echo "Memory for Tsubame for each process in GB:", $mem_tsubame
3269	# n1ge -fore -g 1S060156 -mpi $numprocs -mem 4 -N palm -q $queue a.out $ROPTS
3270	# /n1ge/TITECH_GRID/tools/bin/n1ge -fore -g $group_number -mpi ${numprocs}:$tasks_per_node -mem $mem_tsubame -N palm -rt $minuten -q $queue a.out $ROPTS
3271	n1ge -fore -g $group_number -mpi ${numprocs}:$tasks_per_node -mem $mem_tsubame -N palm -rt $minuten -q $queue a.out $ROPTS
3272	fi
3273
3274	rm $runfile
3275	else
3276	mpprun -n $numprocs a.out $ROPTS
3277	fi
3278	[[ $? != 0 ]] && execution_error=true
3279
3280
3281	# PERFORMANCE-AUSWERTUNG MIT APPRENTICE
3282	if [[ "$cond1" = apprentice \|\| "$cond2" = apprentice ]]
3283	then
3284	apprentice
3285	fi
3286	else
3287	a.out $ROPTS
3288	fi
3289	fi
3290	if [[ $? != 0 \|\| $execution_error = true ]]
3291	then
3292
3293	# ABBRUCH BEI LAUFZEITFEHLER
3294	# [[ ! ( "$cond1" = debug \|\| "$cond2" = debug ) ]] && cat aout_output*
3295	printf "\n +++ runtime error occured"
3296	locat=execution
3297	exit
3298	else
3299	# [[ ! ( "$cond1" = debug \|\| "$cond2" = debug ) ]] && cat aout_output*
3300	printf "\n$striche\n *** execution finished \n"
3301
3302	# Stop the dvr streaming server and process the dvr output in order
3303	# to create dvrs- and html-files containing all streams
3304	if [[ "$dvrserver_id" != "" ]]
3305	then
3306	kill $dvrserver_id
3307	printf "\n *** dvr server with id=$dvrserver_id has been stopped"
3308
3309	# If there is a directory, data have been output by the
3310	# streaming server. Otherwise, user has chosen dvrp_output=local
3311	if [[ -d DATA_DVR ]]
3312	then
3313
3314	# Add the current dvr configuration file to the dvr output
3315	# directory
3316	cp .dvrserver.config DATA_DVR
3317
3318	# Process the dvr output (option -s for also generating
3319	# sequence mode data)
3320	process_dvr_output -d DATA_DVR -f $fname -s
3321
3322	else
3323
3324	# Process the local output
3325	process_dvr_output -l -d DATA_DVR -f $fname
3326
3327	fi
3328
3329	elif [[ $(echo $package_list \| grep -c dvrp_graphics) != 0 ]]
3330	then
3331
3332	# Process dvr output generated in local mode (dvrp_output=local)
3333	process_dvr_output -l -d DATA_DVR -f $fname
3334
3335	fi
3336	fi
3337
3338
3339
3340	# EVENTUELLE OUTPUT-KOMMANDOS ABARBEITEN
3341	(( i = 0 ))
3342	while (( i < ioc ))
3343	do
3344	(( i = i + 1 ))
3345	if (( i == 1 ))
3346	then
3347	printf "\n\n *** execution of OUTPUT-commands:\n$striche"
3348	fi
3349	printf "\n >>> ${out_command[$i]}"
3350	eval ${out_command[$i]}
3351	if (( i == ioc ))
3352	then
3353	printf "\n$striche\n"
3354	fi
3355	done
3356
3357
3358	# EVTL. INHALT DES AKTUELLEN VERZEICHNISSES AUSGEBEN
3359	if [[ $do_trace = true ]]
3360	then
3361	printf "\n\n"
3362	ls -al
3363	fi
3364
3365
3366
3367	# OUTPUT-DATEIEN AN IHRE ZIELORTE KOPIEREN
3368	(( i = 0 ))
3369	while (( i < iout ))
3370	do
3371	(( i = i + 1 ))
3372	if (( i == 1 ))
3373	then
3374	printf "\n\n *** saving OUTPUT-files:\n$striche"
3375	fi
3376
3377	# PRUEFEN, OB EINZELDATEI ODER DATEI PRO PROZESSOR
3378	files_for_pes=false; filetyp=file
3379	if [[ "${actionout[$i]}" = pe && -n $numprocs ]]
3380	then
3381	files_for_pes=true; filetyp=directory
3382	actionout[$i]=""
3383	elif [[ "${actionout[$i]}" = pe && ! -n $numprocs ]]
3384	then
3385	actionout[$i]=""
3386	elif [[ "${actionout[$i]}" = arpe && -n $numprocs ]]
3387	then
3388	files_for_pes=true; filetyp=directory
3389	actionout[$i]="ar"
3390	elif [[ "${actionout[$i]}" = arpe && ! -n $numprocs ]]
3391	then
3392	actionout[$i]="ar"
3393	elif [[ "${actionout[$i]}" = flpe && -n $numprocs ]]
3394	then
3395	files_for_pes=true; filetyp=directory
3396	actionout[$i]="fl"
3397	elif [[ "${actionout[$i]}" = flpe && ! -n $numprocs ]]
3398	then
3399	actionout[$i]="fl"
3400	elif [[ "${actionout[$i]}" = trpe && -n $numprocs ]]
3401	then
3402	files_for_pes=true; filetyp=directory
3403	actionout[$i]="tr"
3404	elif [[ "${actionout[$i]}" = trpe && ! -n $numprocs ]]
3405	then
3406	actionout[$i]="tr"
3407	fi
3408
3409	if [[ ! -f ${localout[$i]} && $files_for_pes = false ]]
3410	then
3411	printf "\n +++ temporary OUTPUT-file ${localout[$i]} does not exist\n"
3412	elif [[ ! -d ${localout[$i]} && $files_for_pes = true ]]
3413	then
3414	printf "\n +++ temporary OUTPUT-file ${localout[$i]}/.... does not exist\n"
3415	else
3416
3417
3418	# KOPIEREN PER FTP/SCP (IMMER IM BINAERMODUS, -M: FALLS ZIELKATALOG
3419	# NICHT VORHANDEN, WIRD VERSUCHT, IHN ANZULEGEN), ABER NUR BEI
3420	# REMOTE-RECHNUNGEN
3421	if [[ "${actionout[$i]}" = tr ]]
3422	then
3423	if [[ $localhost != $fromhost ]]
3424	then
3425	if [[ $files_for_pes = false ]]
3426	then
3427	cps=""
3428	cst=""
3429	else
3430	cps=-c
3431	cst="/"
3432	fi
3433	if [[ $localhost = ibmb \|\| $localhost = nech ]]
3434	then
3435
3436	# TRANSFER IN EIGENSTAENDIGEM JOB
3437	# ZUERST KOPIE DER DATEI INS TEMPORAERE DATENVERZEICHNIS
3438	[[ ! -d $tmp_data_catalog/TRANSFER ]] && mkdir -p $tmp_data_catalog/TRANSFER
3439	file_to_transfer=${fname}_${localout[$i]}_to_transfer_$kennung
3440	if [[ $files_for_pes = false ]]
3441	then
3442	ln -f ${localout[$i]} $tmp_data_catalog/TRANSFER/$file_to_transfer
3443	else
3444	mkdir $tmp_data_catalog/TRANSFER/$file_to_transfer
3445	ln ${localout[$i]}/* $tmp_data_catalog/TRANSFER/$file_to_transfer
3446	fi
3447
3448	echo "set -x" > transfer_${localout[$i]}
3449	echo "cd $tmp_data_catalog/TRANSFER" >> transfer_${localout[$i]}
3450
3451	printf "\n >>> OUTPUT: ${localout[$i]}$cst by SCP in seperate job to"
3452	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}$cst"
3453	printf "\n or higher cycle\n"
3454	echo "batch_scp $cps -b -m -u $return_username $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
3455
3456	echo "[[ \$? = 0 ]] && rm $file_to_transfer" >> transfer_${localout[$i]}
3457
3458	if [[ $localhost = nech ]]
3459	then
3460	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 900 transfer_${localout[$i]}
3461	else
3462	if [[ "$LOGNAME" = b323013 ]]
3463	then
3464	subjob -v -q c1 -X 0 -m 1000 -t 900 -c $job_catalog transfer_${localout[$i]}
3465	else
3466	subjob -d -v -q c1 -X 0 -m 1000 -t 900 -c $job_catalog transfer_${localout[$i]}
3467	fi
3468	fi
3469
3470	else
3471
3472	# TRANSFER INNERHALB DIESES JOBS
3473	transfer_failed=false
3474	printf "\n >>> OUTPUT: ${localout[$i]}$cst by SCP to"
3475	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}$cst\n"
3476	batch_scp $cps -b -m -u $return_username $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
3477	[[ $? != 0 ]] && transfer_failed=true
3478
3479	# BEI FEHLGESCHLAGENEM TRANSFER SICHERUNGSKOPIE AUF
3480	# LOKALER MASCHINE ANLEGEN
3481	if [[ $transfer_failed = true ]]
3482	then
3483	printf " +++ transfer failed. Trying to save a copy on the local host under:\n"
3484	printf " ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung\n"
3485
3486	# ERSTMAL PRUEFEN, OB VERZEICHNIS EXISTIERT. GEGEBENENFALLS
3487	# ANLEGEN.
3488	eval local_catalog=${pathout[$i]}
3489	if [[ ! -d $local_catalog ]]
3490	then
3491	printf " *** local directory does not exist. Trying to create:\n"
3492	printf " $local_catalog \n"
3493	mkdir -p $local_catalog
3494	fi
3495	eval cp ${localout[$i]} ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung
3496	transfer_problems=true
3497	fi
3498	fi
3499	else
3500
3501	# WERTZUWEISUNG, SO DASS WEITER UNTEN NUR KOPIERT WIRD
3502	actionout[$i]=""
3503	fi
3504	fi
3505
3506
3507	# APPEND PER FTP/SCP (IMMER IM BINAERMODUS, -M: FALLS ZIELKATALOG
3508	# NICHT VORHANDEN, WIRD VERSUCHT, IHN ANZULEGEN), ABER NUR BEI
3509	# REMOTE-RECHNUNGEN
3510	if [[ "${actionout[$i]}" = tra ]]
3511	then
3512	if [[ $localhost != $fromhost ]]
3513	then
3514	if [[ $localhost = ibmh \|\| $localhost = ibmb \|\| $localhost = nech ]]
3515	then
3516
3517	# TRANSFER IN EIGENSTAENDIGEM JOB
3518	# ZUERST KOPIE DER DATEI INS TEMPORAERE DATENVERZEICHNIS
3519	[[ ! -d $tmp_data_catalog/TRANSFER ]] && mkdir -p $tmp_data_catalog/TRANSFER
3520	file_to_transfer=${fname}_${localout[$i]}_to_transfer_$kennung
3521	ln -f ${localout[$i]} $tmp_data_catalog/TRANSFER/$file_to_transfer
3522
3523	echo "set -x" > transfer_${localout[$i]}
3524	echo "cd $tmp_data_catalog/TRANSFER" >> transfer_${localout[$i]}
3525
3526	printf "\n >>> OUTPUT: ${localout[$i]} append by SCP in seperate job to"
3527	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}"
3528	printf "\n or higher cycle\n"
3529	echo "batch_scp -A -b -m -u $return_username $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
3530
3531	echo "[[ \$? = 0 ]] && rm $file_to_transfer" >> transfer_${localout[$i]}
3532
3533	if [[ $localhost = nech ]]
3534	then
3535	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 900 transfer_${localout[$i]}
3536	else
3537	if [[ $LOGNAME = b323013 ]]
3538	then
3539	subjob -v -q c1 -X 0 -m 1000 -t 900 -c $job_catalog transfer_${localout[$i]}
3540	else
3541	subjob -d -v -q c1 -X 0 -m 1000 -t 900 -c $job_catalog transfer_${localout[$i]}
3542	fi
3543	fi
3544
3545	else
3546
3547	# TRANSFER INNERHALB DIESES JOBS
3548	transfer_failed=false
3549	printf "\n >>> OUTPUT: ${localout[$i]} append by SCP to"
3550	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}\n"
3551	batch_scp -A -b -m -u $return_username $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
3552	[[ $? != 0 ]] && transfer_failed=true
3553
3554	# BEI FEHLGESCHLAGENEM TRANSFER SICHERUNGSKOPIE AUF
3555	# LOKALER MASCHINE ANLEGEN
3556	if [[ $transfer_failed = true ]]
3557	then
3558	printf " +++ transfer failed. Trying to save a copy on the local host under:\n"
3559	printf " ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung\n"
3560
3561	# ERSTMAL PRUEFEN, OB VERZEICHNIS EXISTIERT. GEGEBENENFALLS
3562	# ANLEGEN
3563	eval local_catalog=${pathout[$i]}
3564	if [[ ! -d $local_catalog ]]
3565	then
3566	printf " *** local directory does not exist. Trying to create:\n"
3567	printf " $local_catalog \n"
3568	mkdir -p $local_catalog
3569	fi
3570
3571	eval cp ${localout[$i]} ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung
3572	transfer_problems=true
3573	fi
3574	fi
3575	else
3576
3577	# WERTZUWEISUNG, SO DASS WEITER UNTEN NUR APPEND AUF
3578	# LOKALER MASCHINE DURCHGEFUEHRT WIRD
3579	actionout[$i]=a
3580	fi
3581	fi
3582
3583
3584	# OUTPUT-DATEI FUER EINEN FORTSETZUNGSLAUF. DATEI WIRD PER
3585	# LINK AUF DEN TEMPORAEREN DATENKATALOG GELEGT. OPTION -f WIRD
3586	# VERWENDET, FALLS DORT NOCH EINE DATEI GLEICHEN NAMENS VORHANDEN
3587	# SEIN SOLLTE. ANSCHLIESSEND WIRD SEINE ARCHIVIERUNG ANGESTOSSEN
3588	if [[ "${actionout[$i]}" = fl ]]
3589	then
3590	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
3591	chmod g+rx $tmp_data_catalog
3592	if [[ $files_for_pes = false ]]
3593	then
3594	printf "\n >>> OUTPUT: ${localout[$i]} to"
3595	printf "\n $tmp_data_catalog/${frelout[$i]} (temporary data catalog)\n"
3596	ln -f ${localout[$i]} $tmp_data_catalog/${frelout[$i]}
3597	else
3598	printf "\n >>> OUTPUT: ${localout[$i]}/.... to"
3599	printf "\n $tmp_data_catalog/${frelout[$i]} (temporary data catalog)\n"
3600	mkdir $tmp_data_catalog/${frelout[$i]}
3601	cd ${localout[$i]}
3602	for file in $(ls *)
3603	do
3604	ln -f $file $tmp_data_catalog/${frelout[$i]}
3605	done
3606	cd $TEMPDIR
3607	fi
3608
3609
3610	# ARCHIVIERUNGSJOB WIRD ERZEUGT UND ABGESCHICKT
3611	if [[ $store_on_archive_system = true ]]
3612	then
3613
3614	if [[ $archive_system = asterix ]]
3615	then
3616	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3617	if [[ $files_for_pes = false ]]
3618	then
3619	echo "stageout ${frelout[$i]} > STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3620	else
3621	echo "stageout -t ${frelout[$i]} > STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3622	fi
3623	echo "cat STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3624	echo "if [[ \$(grep -c \"st.msg:150\" STAGE_OUTPUT${i}_$kennung) != 0 ]]" >> archive_${frelout[$i]}
3625	echo "then" >> archive_${frelout[$i]}
3626	echo " do_stageout=false" >> archive_${frelout[$i]}
3627	echo "else" >> archive_${frelout[$i]}
3628	echo " echo \" +++ $filetyp ${frelout[$i]} could not be stored on archive-system\" " >> archive_${frelout[$i]}
3629	echo " cat /dev/null > ~/job_queue/ARCHIVE_ERROR_$fname" >> archive_${frelout[$i]}
3630	echo " cat STAGE_OUTPUT${i}_$kennung > ~/job_queue/archive_${frelout[$i]}_error" >> archive_${frelout[$i]}
3631	echo " echo \" *** $filetyp ${frelout[$i]} will be copied to \$WORK as backup\" " >> archive_${frelout[$i]}
3632	if [[ $files_for_pes = false ]]
3633	then
3634	echo " cp ${frelout[$i]} \$WORK" >> archive_${frelout[$i]}
3635	else
3636	echo " cp -r ${frelout[$i]} \$WORK/${frelout[$i]}" >> archive_${frelout[$i]}
3637	fi
3638	echo " echo \" *** $filetyp ${frelout[$i]} saved\" " >> archive_${frelout[$i]}
3639	echo "fi" >> archive_${frelout[$i]}
3640	echo "rm STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3641	elif [[ $archive_system = DMF ]]
3642	then
3643	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3644	if [[ $files_for_pes = false ]]
3645	then
3646	printf "\n +++ archiving of single files impossible with $archive_system !\n"
3647	locat=DMF
3648	exit
3649	else
3650	# FUER RECHNER IN JUELICH. DORT KOENNTEN AUCH
3651	# EINZELNE DATEIEN GESICHERT WERDEN (SPAETER KORR.)
3652	echo "rm -rf \$ARCHIVE/${frelout[$i]}" >> archive_${frelout[$i]}
3653	echo "cp -r ${frelout[$i]} \$ARCHIVE" >> archive_${frelout[$i]}
3654	fi
3655	elif [[ $archive_system = tivoli ]]
3656	then
3657	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3658	if [[ $files_for_pes = false ]]
3659	then
3660	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3661	echo "set -x" >> archive_${frelout[$i]}
3662	echo "rm -rf \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3663	echo "cp ${frelout[$i]} \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3664	else
3665
3666	echo "set -x" >> archive_${frelout[$i]}
3667	echo "rm -rf \$PERM/${frelout[$i]}/*" >> archive_${frelout[$i]}
3668	echo "[[ ! -d \$PERM/${frelout[$i]} ]] && mkdir $PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3669	cd $tmp_data_catalog
3670	all_files=`ls -1 ${frelout[$i]}/*`
3671	cd - > /dev/null
3672	(( inode = 0 ))
3673	(( tp1 = tasks_per_node + 1 ))
3674	while (( inode < nodes ))
3675	do
3676	# echo "*** all_files = \"$all_files\" "
3677	files=`echo $all_files \| cut -d" " -f1-$tasks_per_node`
3678	all_files=`echo $all_files \| cut -d" " -f$tp1-`
3679	# echo "*** tasks_per_node = \"$tasks_per_node\" "
3680	# echo "*** files = \"$files\" "
3681	# echo "*** all_files = \"$all_files\" "
3682	echo "tar cvf \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar $files" >> archive_${frelout[$i]}
3683	echo "dsmc incremental \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar" >> archive_${frelout[$i]}
3684	echo "dsmmigrate \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar" >> archive_${frelout[$i]}
3685	(( inode = inode + 1 ))
3686	done
3687	# echo "rm -rf \$PERM/${frelout[$i]}.tar" >> archive_${frelout[$i]}
3688	# echo "tar cvf \$PERM/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
3689	fi
3690	elif [[ $archive_system = ut ]]
3691	then
3692	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3693	if [[ $files_for_pes = false ]]
3694	then
3695	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3696	echo "set -x" >> archive_${frelout[$i]}
3697	echo "rm -rf \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3698	echo "cp ${frelout[$i]} \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3699	else
3700
3701	echo "set -x" >> archive_${frelout[$i]}
3702	echo "rm -rf \$UT/${frelout[$i]}/*" >> archive_${frelout[$i]}
3703	echo "[[ ! -d \$UT/${frelout[$i]} ]] && mkdir $UT/${frelout[$i]}" >> archive_${frelout[$i]}
3704	cd $tmp_data_catalog
3705	all_files=`ls -1 ${frelout[$i]}/*`
3706	cd - > /dev/null
3707	(( inode = 0 ))
3708	(( tp1 = tasks_per_node + 1 ))
3709	while (( inode < nodes ))
3710	do
3711	files=`echo $all_files \| cut -d" " -f1-$tasks_per_node`
3712	all_files=`echo $all_files \| cut -d" " -f$tp1-`
3713	echo "tar cvf \$UT/${frelout[$i]}/${frelout[$i]}.node_$inode.tar $files" >> archive_${frelout[$i]}
3714	(( inode = inode + 1 ))
3715	done
3716	fi
3717	elif [[ $archive_system = none ]]
3718	then
3719	printf " +++ archiving on $localhost not available!\n"
3720	fi
3721
3722	if [[ $archive_system != none ]]
3723	then
3724	if [[ $localhost = ibmh \|\| $localhost = ibmb ]]
3725	then
3726	# subjob -d -v -q cdata -X 0 -m 1000 -t 43200 -c $job_catalog archive_${frelout[$i]}
3727	subjob -v -q cdata -X 0 -m 1000 -t 43200 -c $job_catalog archive_${frelout[$i]}
3728	elif [[ $localhost = nech ]]
3729	then
3730	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 7200 archive_${frelout[$i]}
3731	fi
3732	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
3733	fi
3734	else
3735	printf " +++ caution: option -A is switched on. No archiving on $archive_system!\n"
3736	fi
3737
3738
3739	# LEERDATEI IM BENUTZERVERZEICHNIS ANLEGEN, DAMIT BEKANNT IST,
3740	# WIE DIE HOECHSTE ZYKLUSNUMMER AUF DEM ARCHIV-SYSTEM LAUTET
3741	if [[ $files_for_pes = false ]]
3742	then
3743	cat /dev/null > ${pathout[$i]}
3744	else
3745	mkdir -p ${pathout[$i]}
3746	fi
3747
3748	fi
3749
3750
3751	# KOPIEREN AUF LOKALER MASCHINE ZUM ARCHIV-SYSTEM
3752	# AUSSERDEM MUSS LEERDATEI ANGELEGT WERDEN, DAMIT BEKANNT IST,
3753	# WIE DIE HOECHSTE ZYKLUSNUMMER AUF DEM ARCHIV-SYSTEM LAUTET
3754	# FALLS IRGENDEINE (VON MEHREREN) ARCHIVIERUNGEN SCHIEF GEHT,
3755	# WIRD FLAG GESETZT UND BLEIBT AUCH BEI WEITEREN ORDNUNGS-
3756	# GEMAESSEN ARCHIVIERUNGEN GESETZT
3757	if [[ "${actionout[$i]}" = ar ]]
3758	then
3759	if [[ $files_for_pes = false ]]
3760	then
3761	printf "\n >>> OUTPUT: ${localout[$i]} to"
3762	printf "\n ${pathout[$i]}"
3763	printf "\n File will be copied to archive-system ($archive_system) !\n"
3764	else
3765	printf "\n >>> OUTPUT: ${localout[$i]}/_.... to"
3766	printf "\n ${pathout[$i]}"
3767	printf "\n Directory will be copied to archive-system ($archive_system) !\n"
3768	fi
3769	mv ${localout[$i]} ${frelout[$i]}
3770
3771	file_saved=false
3772
3773	if [[ $archive_system = asterix ]]
3774	then
3775	do_stageout=true
3776	(( stageout_anz = 0 ))
3777	while [[ $do_stageout = true ]]
3778	do
3779	if [[ $files_for_pes = false ]]
3780	then
3781	stageout ${frelout[$i]} > STAGE_OUTPUT
3782	else
3783	stageout -t ${frelout[$i]} > STAGE_OUTPUT
3784	fi
3785	cat STAGE_OUTPUT
3786	if [[ $(grep -c "st.msg:150" STAGE_OUTPUT) != 0 ]]
3787	then
3788	file_saved=true
3789	do_stageout=false
3790	else
3791	if [[ $files_for_pes = false ]]
3792	then
3793	printf "\n +++ file ${frelout[$i]} could not be saved on archive-system"
3794	else
3795	printf "\n +++ directory ${frelout[$i]} could not be saved on archive-system"
3796	fi
3797	(( stageout_anz = stageout_anz + 1 ))
3798	if (( stageout_anz == 10 ))
3799	then
3800	printf "\n +++ stoped after 10 unsuccessful tries!"
3801	archive_save=false
3802	do_stageout=false
3803	else
3804	printf "\n *** new try to store on archive after 15 min:"
3805	sleep 900
3806	fi
3807	fi
3808	done
3809	elif [[ $archive_system = DMF ]]
3810	then
3811	if [[ $files_for_pes = false ]]
3812	then
3813	printf "\n +++ archiving of single files impossible on $archive_system!\n"
3814	locat=DMF
3815	exit
3816	else
3817	rm -rf $ARCHIVE/${frelout[$i]}
3818	cp -r ${frelout[$i]} $ARCHIVE
3819	fi
3820	file_saved=true
3821	elif [[ $archive_system = tivoli ]]
3822	then
3823	# ARCHIVIERUNG NUR PER BATCH-JOB MOEGLICH
3824	# DATEI MUSS ZWISCHENZEITLICH INS TEMPORAERE DATENVERZEICHNIS
3825	# GELEGT WERDEN
3826	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
3827	chmod g+rx $tmp_data_catalog
3828	if [[ $files_for_pes = false ]]
3829	then
3830	ln -f ${frelout[$i]} $tmp_data_catalog/${frelout[$i]}
3831	else
3832	mkdir $tmp_data_catalog/${frelout[$i]}
3833	ln -f ${frelout[$i]}/* $tmp_data_catalog/${frelout[$i]}
3834	fi
3835
3836	# BATCH JOB GENERIEREN UND ABSCHICKEN; DATEI MUSS WIEDER
3837	# AUS TEMPORAEREM DATENVERZEICHNIS ENTFERNT WERDEN
3838	echo "cd $tmp_data_catalog" > archive_${frelout[$i]}
3839	if [[ $files_for_pes = false ]]
3840	then
3841	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3842	echo "rm -rf \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3843	echo "cp ${frelout[$i]} \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3844	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3845	else
3846	echo "rm -rf \$PERM/${frelout[$i]}.tar" >> archive_${frelout[$i]}
3847	echo "tar cvf \$PERM/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
3848	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3849	fi
3850
3851	subjob -v -d -q cdata -X 0 -m 1000 -t 43200 -c $job_catalog archive_${frelout[$i]}
3852	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
3853	file_saved=true
3854
3855	elif [[ $archive_system = ut ]]
3856	then
3857	# ARCHIVIERUNG NUR PER BATCH-JOB MOEGLICH
3858	# DATEI MUSS ZWISCHENZEITLICH INS TEMPORAERE DATENVERZEICHNIS
3859	# GELEGT WERDEN
3860	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
3861	chmod g+rx $tmp_data_catalog
3862	if [[ $files_for_pes = false ]]
3863	then
3864	ln -f ${frelout[$i]} $tmp_data_catalog/${frelout[$i]}
3865	else
3866	mkdir $tmp_data_catalog/${frelout[$i]}
3867	ln -f ${frelout[$i]}/* $tmp_data_catalog/${frelout[$i]}
3868	fi
3869
3870	# BATCH JOB GENERIEREN UND ABSCHICKEN; DATEI MUSS WIEDER
3871	# AUS TEMPORAEREM DATENVERZEICHNIS ENTFERNT WERDEN
3872	echo "cd $tmp_data_catalog" > archive_${frelout[$i]}
3873	if [[ $files_for_pes = false ]]
3874	then
3875	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3876	echo "rm -rf \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3877	echo "cp ${frelout[$i]} \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3878	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3879	else
3880	echo "rm -rf \$UT/${frelout[$i]}.tar" >> archive_${frelout[$i]}
3881	echo "tar cvf \$UT/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
3882	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3883	fi
3884
3885	subjob -v -c /pf/b/$usern/job_queue -d -q pp -X 0 -m 1000 -t 7200 archive_${frelout[$i]}
3886	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
3887	file_saved=true
3888
3889	else
3890	printf "\n +++ archive_system=\"$archive_system\" archiving impossible!"
3891	archive_save=false
3892	fi
3893	if [[ $file_saved = true ]]
3894	then
3895	if [[ $files_for_pes = false ]]
3896	then
3897	cat /dev/null > ${pathout[$i]}
3898	else
3899	mkdir -p ${pathout[$i]}
3900	fi
3901	fi
3902	fi
3903
3904	# APPEND AUF LOKALER MASCHINE
3905	if [[ "${actionout[$i]}" = "a" ]]
3906	then
3907	printf "\n >>> OUTPUT: ${localout[$i]} append to ${pathout[$i]}\n"
3908	cat ${localout[$i]} >> ${pathout[$i]}
3909	fi
3910
3911	# KOPIEREN AUF LOKALER MASCHINE
3912	# ES MUSS KOPIERT WERDEN, DA MOVE NICHT UEBER FILESYSTEM HINAUS MOEGLICH
3913	if [[ "${actionout[$i]}" = "" && $files_for_pes = false ]]
3914	then
3915
3916	# KOPIEREN AUF EINPROZESSORMASCHINE
3917	if [[ "${extout[$i]}" != " " && "${extout[$i]}" != "" ]]
3918	then
3919	printf "\n >>> OUTPUT: ${localout[$i]} to ${pathout[$i]}.${extout[$i]}\n"
3920	if [[ $link_local_output = true ]]
3921	then
3922	printf " using ln -f\n"
3923	ln -f ${localout[$i]} ${pathout[$i]}.${extout[$i]}
3924	fi
3925	# If "ln -f" fails of if "$link_local_output = false" do a normal "cp"
3926	if [[ ! -f "${pathout[$i]}.${extout[$i]}" ]]
3927	then
3928	if [[ $link_local_output = true ]]
3929	then
3930	printf " ln failed, using cp...\n"
3931	fi
3932	cp ${localout[$i]} ${pathout[$i]}.${extout[$i]}
3933	fi
3934	else
3935	printf "\n >>> OUTPUT: ${localout[$i]} to ${pathout[$i]}\n"
3936	if [[ $link_local_output = true ]]
3937	then
3938	printf " using ln -f\n"
3939	ln -f ${localout[$i]} ${pathout[$i]}
3940	fi
3941	# If "ln -f" fails of if "$link_local_output = false" do a normal "cp"
3942	if [[ ! -f "${pathout[$i]}" ]]
3943	then
3944	if [[ $link_local_output = true ]]
3945	then
3946	printf " ln failed, using cp...\n"
3947	fi
3948	cp ${localout[$i]} ${pathout[$i]}
3949	fi
3950	fi
3951
3952	elif [[ "${actionout[$i]}" = "" && $files_for_pes = true ]]
3953	then
3954
3955	# DIE DEN PROZESSOREN EINES PARALLELRECHNERS ZUGEHOERIGEN
3956	# DATEIEN WERDEN ERST IN EINEM KATALOG GESAMMELT UND DIESER
3957	# WIRD DANN KOPIERT
3958	# PER MOVE UMBENANNT WERDEN
3959	printf "\n >>> OUTPUT: ${localout[$i]}/_.... to ${pathout[$i]}\n"
3960	if [[ $link_local_output = true ]]
3961	then
3962	printf " using ln -f\n"
3963	mkdir ${pathout[$i]}
3964	cd ${localout[$i]}
3965	for file in $(ls *)
3966	do
3967	ln -f $file ${pathout[$i]}
3968	done
3969	cd $TEMPDIR
3970	fi
3971	# If "ln -f" fails of if "$link_local_output = false" do a normal "cp -r"
3972	if [[ ! -f "${pathout[$i]}/_0000" ]]
3973	then
3974	if [[ $link_local_output = true ]]
3975	then
3976	printf " ln failed for .../_0000, using cp...\n"
3977	fi
3978	cp -r ${localout[$i]} ${pathout[$i]}
3979	fi
3980
3981	fi
3982	fi
3983	done
3984	if (( i != 0 ))
3985	then
3986	if [[ $transfer_problems = true ]]
3987	then
3988	printf "\n$striche\n *** OUTPUT-files saved"
3989	printf "\n +++ WARNING: some data transfers failed! \n"
3990	else
3991	printf "\n$striche\n *** all OUTPUT-files saved \n"
3992	fi
3993	fi
3994
3995
3996	# EVENTUELL FOLGEJOB STARTEN
3997	# DATEI CONTINUE_RUN MUSS VOM BENUTZERPROGRAMM AUS ERZEUGT WERDEN
3998	if [[ -f CONTINUE_RUN ]]
3999	then
4000
4001	if [[ $archive_save = true ]]
4002	then
4003
4004	# ZUERST IN MRUN-AUFRUF OPTIONEN FUER FORTSETZUNGSLAUF, FUER
4005	# STILLES ABARBEITEN (OHNE INTERAKTIVE RUECKFAGEN) UND FUER
4006	# BATCH-BETRIEB (NUR WICHTIG, FALLS BATCH AUF LOKALER MASCHINE
4007	# DURCHGEFUEHRT WERDEN SOLL) EINFUEGEN, FALLS NICHT BEREITS VOR-
4008	# HANDEN
4009	[[ $(echo $mc \| grep -c "\-C") = 0 ]] && mc="$mc -C"
4010	[[ $(echo $mc \| grep -c "\-v") = 0 ]] && mc="$mc -v"
4011	[[ $(echo $mc \| grep -c "\-b") = 0 ]] && mc="$mc -b"
4012	if [[ $(echo $mc \| grep -c "#") != 0 ]]
4013	then
4014	mc=`echo $mc \| sed 's/#/f/g'`
4015	fi
4016
4017
4018	# JOB STARTEN
4019	printf "\n\n *** initiating restart-run on \"$return_addres\" using command:\n"
4020	echo " $mc"
4021	printf "\n$striche\n"
4022	if [[ $localhost != $fromhost ]]
4023	then
4024
4025	if [[ $localhost = lcsgih \|\| $localhost = lcsgib \|\| $localhost = nech \|\| $localhost = ibmb \|\| $localhost = ibmh \|\| $localhost = ibms \|\| $localhost = lctit ]]
4026	then
4027	echo "*** ssh will be used to initiate restart-runs!"
4028	echo " return_addres=\"$return_addres\" "
4029	echo " return_username=\"$return_username\" "
4030	if [[ $return_addres = 172.20.25.41 ]]
4031	then
4032	# WORKAROUND AUF SCIROCCO AM TIT
4033	print "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc " \| ssh $return_addres -l $return_username
4034	else
4035	ssh $return_addres -l $return_username "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc "
4036	fi
4037	else
4038	printf "\n +++ no restart mechanism available for host \"$localhost\" "
4039	locat=restart; exit
4040	fi
4041
4042	# WARTEN, DAMIT SICH RESTART JOB IN QUEUE EINREIHEN KANN, BEVOR
4043	# DER AKTUELLE JOB ENDET
4044	sleep 30
4045
4046	else
4047
4048	# BEI RECHNUNGEN AUF LOKALER MASCHINE KANN MRUN DIREKT AUFGE-
4049	# RUFEN WERDEN, AUSSER AUF lcfimm
4050	cd $LOCAL_PWD
4051	if [[ $localhost = lcfimm ]]
4052	then
4053	ssh $return_addres -l $return_username "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc "
4054	else
4055	eval $mc # ' MUESSEN AUSGEWERTET WERDEN
4056	fi
4057	cd - > /dev/null
4058	fi
4059	printf "\n$striche\n *** restart-run initiated \n"
4060
4061
4062	# EVENTUELL INPUT-DATEIEN, DIE VON TEMPORAEREM DATENVERZEICHNIS
4063	# GEHOLT WORDEN SIND, LOESCHEN
4064	(( i = 0 ))
4065	while (( i < iin ))
4066	do
4067	(( i = i + 1 ))
4068	if [[ "${got_tmp[$i]}" = true && $keep_data_from_previous_run = false ]]
4069	then
4070	rm -r $tmp_data_catalog/${frelin[$i]}
4071	fi
4072	done
4073
4074	else
4075
4076	printf "\n +++ no restart-run possible, since errors occured"
4077	printf "\n during the archive process"
4078	fi
4079
4080	fi
4081
4082
4083
4084	# EVTL. EMAIL-BENACHRICHTIGUNG UEBER ABGESCHLOSSENEN LAUF
4085	if [[ "$email_notification" != "none" ]]
4086	then
4087
4088	if [[ $localhost != $fromhost ]]
4089	then
4090	if [[ -f CONTINUE_RUN ]]
4091	then
4092	echo "PALM restart run necessary" > email_text
4093	echo "description header of actual run:" >> email_text
4094	cat CONTINUE_RUN >> email_text
4095	echo "mrun-command to restart:" >> email_text
4096	echo "$mc" >> email_text
4097	else
4098	echo "PALM run with base filename \"$fname\" on host \"$localhost\" finished" > email_text
4099	fi
4100	mail $email_notification < email_text
4101	printf "\n *** email notification sent to \"$email_notification\" "
4102	fi
4103	fi
4104
4105
4106
4107	# ALLE ARBEITEN BEENDET. TEMPORAERER KATALOG KANN GELOESCHT WERDEN
4108	cd $HOME
4109	[[ $delete_temporary_catalog = true ]] && rm -rf $TEMPDIR
4110
4111	else
4112
4113
4114	# FALLS AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL, WERDEN JETZT ENTSPRE-
4115	# CHENDE AKTIONEN DURCHGEFUEHRT
4116
4117	# MRUN-BEFEHL FUER REMOTE-MASCHINE ZUSAMMENSTELLEN
4118	mrun_com="$mrun_script_name -a $afname -c $config_file -d $fname -h $host -H $fromhost -m $memory -t $cpumax -q $queue -R $return_addres -U $return_username -u $remote_username"
4119	[[ "$cpp_opts" != "" ]] && mrun_com=${mrun_com}" -D \"$cpp_opts\""
4120	[[ "$global_revision" != "" ]] && mrun_com=${mrun_com}" -G \"$global_revision\""
4121	[[ $group_number != none ]] && mrun_com=${mrun_com}" -g $group_number"
4122	[[ $do_compile = true ]] && mrun_com=${mrun_com}" -s \"$source_list\""
4123	[[ "$input_list" != "" ]] && mrun_com=${mrun_com}" -i \"$input_list\""
4124	[[ $ignore_archive_error = true ]] && mrun_com=${mrun_com}" -I"
4125	[[ $keep_data_from_previous_run = true ]] && mrun_com=${mrun_com}" -k"
4126	[[ "$additional_conditions" != "" ]] && mrun_com=${mrun_com}" -K \"$additional_conditions\""
4127	# [[ "$makefile" != "$source_path/Makefile" ]] && mrun_com=${mrun_com}" -M \"$makefile\""
4128	[[ "$output_list" != "" ]] && mrun_com=${mrun_com}" -o \"$output_list\""
4129	[[ "$read_from_config" = false ]] && mrun_com=${mrun_com}" -S"
4130	[[ $do_trace = true ]] && mrun_com=${mrun_com}" -x"
4131	[[ "$numprocs" != "" ]] && mrun_com=${mrun_com}" -X $numprocs"
4132	if [[ $use_openmp = true ]]
4133	then
4134	mrun_com=${mrun_com}" -O"
4135	[[ "$tasks_per_node" != "" ]] && mrun_com=${mrun_com}" -T $threads_per_task"
4136	else
4137	[[ "$tasks_per_node" != "" ]] && mrun_com=${mrun_com}" -T $tasks_per_node"
4138	fi
4139	[[ $store_on_archive_system = false ]] && mrun_com=${mrun_com}" -A"
4140	[[ $package_list != "" ]] && mrun_com=${mrun_com}" -p \"$package_list\""
4141	[[ $return_password != "" ]] && mrun_com=${mrun_com}" -P $return_password"
4142	[[ $delete_temporary_catalog = false ]] && mrun_com=${mrun_com}" -B"
4143	[[ $node_usage != default && "$(echo $node_usage \| cut -c1-3)" != "sla" && $node_usage != novice ]] && mrun_com=${mrun_com}" -n $node_usage"
4144	[[ "$ocean_file_appendix" = true ]] && mrun_com=${mrun_com}" -y"
4145	[[ $run_coupled_model = true ]] && mrun_com=${mrun_com}" -Y \"$coupled_dist\""
4146	if [[ $do_remote = true ]]
4147	then
4148	printf "\n>>>> MRUN-command on execution host:\n>>>> $mrun_com \n"
4149	fi
4150
4151
4152	# ZUSAMMENSTELLUNG DES JOBSCRIPTS AUF DATEI jobfile
4153	jobfile=jobfile.$RANDOM
4154
4155
4156	# TEMPORAERES VERZEICHNIS GENERIEREN UND NACH DORT WECHSELN
4157	echo "mkdir $TEMPDIR" >> $jobfile
4158	echo "cd $TEMPDIR" >> $jobfile
4159
4160
4161	# EVENTUELL FEHLERVERFOLGUNG AKTIVIEREN
4162	if [[ $do_trace = true ]]
4163	then
4164	echo "set -x" >> $jobfile
4165	else
4166	echo "set +vx" >> $jobfile
4167	fi
4168
4169
4170	# BEREITSTELLUNG VON QUELLTEXTEN, MRUN-SCRIPTS UND KONFIGURATIONS-
4171	# DATEI FUER DEN JOB
4172	if [[ $( echo $host \| cut -c1-5 ) = lcsgi ]]
4173	then
4174
4175	# KONFIGURATIONSDATEI UND MRUN_SCRIPT IN DAS SOURCE-VERZEICHNIS
4176	# KOPIEREN
4177	if [[ $restart_run != true ]]
4178	then
4179	cp $config_file $working_directory/SOURCES_FOR_RUN_$fname
4180	cp ${PALM_BIN}/$mrun_script_name $working_directory/SOURCES_FOR_RUN_$fname
4181	fi
4182
4183	# SOURCE-VERZEICHNIS VOM LOKALEN RECHNER PER SCP TRANSFERIEREN
4184	echo "set -x" >> $jobfile
4185	echo "scp -r $return_username@$return_addres:$working_directory/SOURCES_FOR_RUN_$fname ." >> $jobfile
4186	echo "export SOURCES_COMPLETE=true" >> $jobfile
4187
4188	# QUELLTEXTE, MRUN-SCRIPT UND KONFIGURATIONSDATEI IN DAS AKTUELLE
4189	# ARBEITSVERZEICHNIS VERSCHIEBEN
4190	echo "mv SOURCES_FOR_RUN_$fname/$config_file . " >> $jobfile
4191	echo "mv SOURCES_FOR_RUN_$fname/$mrun_script_name . " >> $jobfile
4192	echo "execute_mrun=true" >> $jobfile
4193	echo " " >> $jobfile
4194
4195	else
4196
4197	# ABSPEICHERN DER QUELLTEXTE (NUR FALLS UEBERSETZT WERDEN SOLL)
4198	# SOWIE GEGEBENENFALLS DES MAKEFILES
4199	if [[ $do_compile = true ]]
4200	then
4201
4202	source_catalog=SOURCES_FOR_RUN_$fname
4203
4204	# UNTERVERZEICHNIS FUER QUELLTEXTE UND MAKEFILE ANLEGEN
4205	# MRUN WIRD DIESES VRZEICHNIS UEBER ENVIRONMENT VARIABLE
4206	# MITGETEILT (UEBERSTEUERT ANGABE IN KONFIGURATIONSDATEI)
4207	echo "mkdir SOURCES_FOR_RUN_$fname" >> $jobfile
4208	echo "export SOURCES_COMPLETE=true" >> $jobfile
4209	echo "cd SOURCES_FOR_RUN_$fname" >> $jobfile
4210
4211	for filename in $source_list
4212	do
4213	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
4214	echo "cat > $filename << \"%END%\"" >> $jobfile
4215	cat $source_catalog/$filename >> $jobfile
4216	echo " " >> $jobfile
4217	echo "%END%" >> $jobfile
4218	echo " " >> $jobfile
4219	done
4220
4221	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
4222	echo "cat > Makefile << \"%END%\"" >> $jobfile
4223	cat $source_catalog/Makefile >> $jobfile
4224	echo " " >> $jobfile
4225	echo "%END%" >> $jobfile
4226	echo " " >> $jobfile
4227
4228	echo "cd - > /dev/null" >> $jobfile
4229
4230	fi
4231
4232
4233	# ABSPEICHERN DER KONFIGURATIONSDATEI
4234	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
4235	echo "cat > $config_file << \"%END%\"" >> $jobfile
4236	cat $config_file >> $jobfile
4237	echo "%END%" >> $jobfile
4238	echo " " >> $jobfile
4239
4240
4241	# ABSPEICHERN DER AKTUELLEN MRUN-VERSION
4242	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
4243	echo "cat > $mrun_script_name <<\"%END%\"" >> $jobfile
4244	cat ${PALM_BIN}/$mrun_script_name >> $jobfile
4245	echo "%END%" >> $jobfile
4246	if [[ $host = lctit ]]
4247	then
4248	echo "sed 's/bin\/ksh/home2\/usr5\/mkanda\/pub\/ksh/' < $mrun_script_name > mrun_new" >> $jobfile
4249	echo "mv mrun_new $mrun_script_name" >> $jobfile
4250	fi
4251	echo "chmod u+x $mrun_script_name" >> $jobfile
4252	echo "execute_mrun=true" >> $jobfile
4253	echo " " >> $jobfile
4254
4255	fi
4256
4257
4258	# EVTL. BENOETIGTE INPUT-DATEIEN PER FTP HOLEN ODER DEM JOB DIREKT
4259	# MITGEBEN UND AUF DEM REMOTE-RECHNER IM BENUTZERVERZEICHNIS ABLEGEN
4260	# FALLS DIESES NICHT EXISTIERT, WIRD VERSUCHT, DAS JEWEILS LETZTE
4261	# UNTERVERZEICHNIS DES PFADNAMENS ANZULEGEN
4262	if [[ $do_remote = true ]]
4263	then
4264	(( i = 0 ))
4265	while (( i < iin ))
4266	do
4267	(( i = i + 1 ))
4268	echo "[[ ! -d ${pathin[$i]} ]] && mkdir -p ${pathin[$i]}" >> $jobfile
4269	if [[ "${transin[$i]}" = job ]]
4270	then
4271	echo "cat > ${remotepathin[$i]} <<\"%END%\"" >> $jobfile
4272	eval cat ${pathin[$i]}/${frelin[$i]} >> $jobfile
4273	echo " " >> $jobfile
4274	echo "%END%" >> $jobfile
4275	else
4276	echo "batch_scp -b -o -g -s -u $return_username $return_addres ${remotepathin[$i]} \"${pathin[$i]}\" ${frelin[$i]}" >> $jobfile
4277	fi
4278
4279	# UEBERPRUEFEN, OB DATEI ANGELEGT WERDEN KONNTE
4280	echo "if [[ \$? = 1 ]]" >> $jobfile
4281	echo "then" >> $jobfile
4282	echo " echo \" \" " >> $jobfile
4283	echo " echo \"+++ file ${remotepathin[$i]} could not be created\" " >> $jobfile
4284	echo " echo \" please check, if directory exists on $host!\" " >> $jobfile
4285	echo " echo \"+++ MRUN will not be continued\" " >> $jobfile
4286	echo " execute_mrun=false" >> $jobfile
4287	echo "fi" >> $jobfile
4288	done
4289	fi
4290
4291	# ARBEITSKATALOG AUF DER LOKALEN MASCHINE FUER EVENTUELLE
4292	# FORTSETZUNGSLAUEFE PER ENV-VARIABLE UEBERGEBEN
4293	echo "LOCAL_PWD=$working_directory" >> $jobfile
4294	echo "export LOCAL_PWD" >> $jobfile
4295
4296	# EBENSO LOKALEN MRUN-KATALOG UEBERGEBEN
4297	echo "LOCAL_MRUN_PATH=$PALM_BIN" >> $jobfile
4298	echo "export LOCAL_MRUN_PATH" >> $jobfile
4299
4300	# WORKAROUND FUER RIAM-NEC-JOBS WEGEN PROFILE-SCHWIERIGKEITEN
4301	if [[ $localhost_realname = "gate" \|\| $localhost = lctit ]]
4302	then
4303	echo "export PALM_BIN=$PALM_BIN" >> $jobfile
4304	fi
4305
4306	# MRUN AUF ZIELRECHNER AUFRUFEN
4307	echo "set -x" >> $jobfile
4308	echo "[[ \$execute_mrun = true ]] && ./$mrun_com" >> $jobfile
4309
4310	echo 'ls -al; echo `pwd`' >> $jobfile
4311	echo "cd \$HOME" >> $jobfile
4312	echo "rm -rf $TEMPDIR" >> $jobfile
4313
4314
4315
4316
4317	# JOB PER SUBJOB STARTEN
4318	if [[ $silent = false ]]
4319	then
4320	printf "\n "
4321	else
4322	printf "\n\n"
4323	fi
4324
4325	subjob $job_on_file -h $host -u $remote_username -g $group_number -q $queue -m $memory -N $node_usage -t $cpumax $XOPT $TOPT $OOPT -n $fname -v -c $job_catalog -e $email_notification $jobfile
4326	rm -rf $jobfile
4327
4328
4329	fi # ENDE REMOTE-TEIL
4330
4331
4332
4333	# ENDE DER PROZEDUR

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