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source: palm/trunk/SCRIPTS/mrun @ 126

Last change on this file since 126 was 126, checked in by letzel, 17 years ago
Further adjustments for queues on lctit
Property svn:keywords set to `Rev`
File size: 139.7 KB

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1	#!/bin/ksh
2	# mrun - Plot-Shellskript
3	# $Id: mrun 61 2007-03-12 05:42:06Z raasch $
4
5	# Prozedur zum Starten von Modellaeufen
6
7	# letzte Aenderung:
8	# 03/03/94 - Siggi - Entwicklungsbeginn
9	# 21/03/94 - Siggi - Entwicklungsabschluss (Version 1.0)
10	# 09/12/94 - Siggi - allexport unterbunden; statt dessen werden jetzt ein-
11	# zelne Variable exportiert. Dies ist noetig, weil an-
12	# sonsten irgendein Speicher ueberlaeuft und von mrun
13	# aufgerufene Programme (z.B. stageout) mit Fehlern
14	# abbrechen (too many arguments)
15	# 20/06/95 - Siggi - noclobber muss explizit abgeschaltet, da jetzt
16	# defaultmaessig im RRZN-Profile eingeschaltet
17	# 10/06/97 - Siggi - Zusaetzliche Option -C bei cpp, damit // nicht
18	# wegfallen
19	# 25/04/00 - Siggi - Version 1.5
20	# remote_addres und remote_user in return_addres bzw.
21	# return_username umbenannt, return_username wird dem
22	# mrun-Aufruf im Job ueber Option -U mitgegeben.
23	# Neue Variable remote_username, die beim interaktiven
24	# mrun-Aufruf zwingend ueber die neue Option -u oder
25	# in der Konfigurationsdatei angegeben werden muss.
26	# 08/02/01 - Siggi - Alle mrun-Meldungen ins englische uebersetzt,
27	# Version 1.7
28	# 05/05/02 - Siggi - Uebersetzungen mittels make-Mechanismus moeglich
29	# 21/11/02 - Siggi - ENV-Variable XLFRTEOPTS wird vor Ausfuehrung auf
30	# IBM gesetzt, um Record-Laenge der NAMELIST-Dateien,
31	# zu bestimmen; Praeprozessoroptionen haben nun alle
32	# die Form -Dtext=text, weil auf IBM sonst text durch
33	# die leere Zeichenkette ersetzt wird
34	# 01/08/03 - Siggi - Test of implementing dvrp+1PE on ibm
35	# 07/01/04 - Siggi - additional preprocessor directive for ibm included
36	# (-D$OMP=OMP) in order to avoid problems with
37	# OMP_NUM_THREADS
38	# 04/01/05 - Siggi - archiving on hanni and berni is done in separate
39	# tar files, one for each node used
40	# 07/01/04 - Siggi - old code for t3e, vpp and hpcs eliminated
41	# 09/01/05 - Siggi - workaround for getting the IP address on gfdl3
42	# 17/01/05 - Siggi - job for data transfer to local machine now within
43	# job class c1 (HLRN)
44	# 27/01/05 - Siggi - IP address workaround for gfdl3 removed
45	# 28/01/05 - Siggi - tar-filenames on $PERM (HLRN) now include the
46	# base filename and cycle number
47	# 16/02/05 - Gerald - hababai validated
48	# 14/03/05 - Siggi - abort on NEC after first runtime error (F_ERRCNT)
49	# 29/03/05 - Marcus - berni*-en0 validated
50	# 21/04/05 - Siggi - transfer-job-protocol for avs-data is no more stored
51	# 24/04/05 - Siggi - netcdf support on lcmuk
52	# 25/04/05 - Siggi - netcdf support on gfld3 (decalpha)
53	# 11/05/05 - Siggi - files with non-numeric extensions (.xxx after cycle
54	# number) can now be used within interactive runs
55	# 12/05/05 - Siggi - netcdf support on ibm
56	# 13/05/05 - Siggi - error in tar-filenames on $PERM (HLRN) removed
57	# 18/05/05 - Siggi - netcdf support on nec
58	# 24/05/05 - Siggi - netcdf support on ibms
59	# 14/06/05 - Siggi - sleep interval after submit of restart job increased
60	# to 30 seconds
61	# 28/06/05 - Siggi - bora adjusted to new intel compiler (LD_LIBRARY_
62	# PATH is temporarily set)
63	# 07/09/05 - Siggi - setting of MP_EAGER_LIMIT switched off because it
64	# caused warnings in the job protocol
65	# 20/10/05 - Siggi - update of netcdf-version on decalpha (gfdl3)
66	# 25/10/05 - Siggi - error in listing files for getting the cycle number
67	# removed
68	# 26/10/05 - Siggi - new paths for dvrp-library, transfer of catalogs
69	# realized by file attribute trpe
70	# 28/10/05 - Siggi - if existing, the file extension is output in case
71	# of missing input file - no job abort in case of
72	# missing input files with file extensions
73	# (preliminary solution)
74	# 31/10/05 - Siggi - data transfer from nech now within seperate job
75	# 04/11/05 - Siggi - netcdf 3.6.0-p1 on ibmh/ibmb
76	# 07/12/05 - Siggi - gallego and elephanta admitted
77	# 30/12/05 - Siggi - gfdl5 (ibmy) admitted
78	# 10/01/06 - Siggi - cpp directive for NetCDF 64bit support
79	# 20/01/06 - Siggi - cpp directive for ibmy
80	# 09/02/06 - Siggi - ibmy admitted for batch mode
81	# 13/04/06 - Siggi - ostria admitted
82	# 18/04/06 - Siggi - usage of OpenMP implemented (additional option -O)
83	# 10/05/06 - Siggi - environment variable XLSMPOPTS set on IBM for
84	# optimization of OpenMP runs (option stacksize is
85	# necessary for large gridpoint numbers because
86	# otherwise a segmentation fault occurs)
87	# 23/05/05 - Siggi - lctit (SUN Fire X4600) admitted
88	# 21/08/06 - Siggi - standard mrun path on scirocco is as on bora
89	# 23/08/06 - Siggi - netcdf support for scirocco (notebook)
90	# 20/09/06 - Marcus - add DVRP library on nech
91	# 24/10/06 - Siggi - Environment variables for PALM steering are written
92	# on local NAMELIST file ENVPAR
93	# 24/11/06 - Siggi - levanto admitted, maestro switched to ifc 9.1
94	# 28/11/06 - Siggi - call to interpret_config.x_levanto because of SuSe 10
95	# 06/02/07 - Siggi - add DVRP library on lcmuk
96	# 07/02/07 - Siggi - revision of source code handling, source code is
97	# now expected in directory given by source_path and
98	# not in the current working directory, source code
99	# files provided in add_source_path are allways
100	# compiled, source code to be compiled is allways
101	# sampled in SOURCES_FOR_RUN_$fname which is a
102	# subdirectory of the current working directory,
103	# -s TEST changed to -s WRITE_PERMIT or -s WP,
104	# adapted for RIAM (neck)
105	# bugfix for cycle number of output file (extout)
106	# all hpmuk-related code removed
107	# 14/02/07 - Siggi - dvrp support for neck added
108	# 28/02/07 - Siggi - empty lines in configuration file are accepted
109	# mrun_path replaced by PALM_BIN,
110	# all machines are calling interpret_config.x
111	# 14/03/07 - Siggi - fimm admitted, revision number added to terminal
112	# output
113	# 16/03/07 - Siggi - adjustments for lctit
114	# 29/03/07 - Siggi - global revision transfered to batch job by new
115	# option -G
116	# 30/03/07 - Siggi - compilation "by hand" removed, cpp-directives/options
117	# + netcdf/dvrp-options are read from configuration
118	# file, host identifier (local_host) is read from
119	# config file, code related to ftp filetransfer
120	# removed (incl. option -f)
121	# 19/06/07 - Siggi - time limit for cdata jobs increased
122	# 25/07/07 - Siggi - two sets of executables can be started on lcmuk,
123	# if new option -Y (coupling) is given,
124	# output of executables to aout_output removed,
125	# messages are immediately written to stdout instead
126	# 03/08/07 - Marcus - add XOPT="-X $numprocs" for lcfimm
127	# 09/08/07 - Marcus - workaround on lcfimm to propagate environment
128	# variables out to the nodes in coupled mode -disabled-
129	# 13/08/07 - Marcus - start local restart jobs per ssh on lcfimm
130	# 28/08/07 - Marcus - completely remove workaround on lcfimm to propagate
131	# environment variables out to the nodes in coupled mode
132	# 15/10/07 - Siggi - Preliminary adjustments for lctit, based on Jin's
133	# suggestions
134	# 19/10/07 - Marcus - further adjustments for lctit: add new optional
135	# argument -g group_number, admit all sla* node_usage
136	# queues
137	# 23/10/07 - Marcus - further adjustments for queues on lctit
138
139
140	# VARIABLENVEREINBARUNGEN + DEFAULTWERTE
141
142	set +o allexport # SICHERHEITSHALBER UNTERBINDEN, DA SONST EVTL. STAGEOUT
143	# NICHT LAUEFT (TOO MANY ARGUMENTS - PROBLEM)
144	set +o noclobber # EXISTIERENDE DATEIEN DUERFEN UEBERSCHRIEBEN WERDEN
145
146	AddFilenames=""
147	additional_conditions=""
148	add_source_path=""
149	afname=""
150	archive_save=true
151	archive_system=none
152	compiler_name=""
153	cond1=""
154	cond2=""
155	config_file=.mrun.config
156	cpp_opts=""
157	cpp_options=""
158	cpumax=0
159	cpurest=0
160	delete_temporary_catalog=true
161	do_batch=false
162	do_compile=true
163	do_remote=false
164	do_stagein=true
165	do_stageout=true
166	do_trace=false
167	email_notification=""
168	exclude=""
169	executable=""
170	execution_error=false
171	fimm=false
172	fname=test
173	fromhost=""
174	global_revision=""
175	group_number=none
176	host=""
177	host_file=""
178	hp=""
179	ignore_archive_error=false
180	input_list=""
181	interpreted_config_file=""
182	job_on_file=""
183	keep_data_from_previous_run=false
184	localhost_realname=$(hostname)
185	local_compile=false
186	locat=normal
187	mainprog=""
188	makefile=""
189	mc=$0
190	while [[ $(echo $mc \| grep -c "/") != 0 ]]
191	do
192	mc=`echo $mc \| cut -f2- -d"/"`
193	done
194	module_files=""
195	mrun_script_name=$mc
196	netcdf_inc=""
197	netcdf_lib=""
198	netcdf_support=false
199	node_usage=default
200	numprocs=""
201	OOPT=""
202	openmp=false
203	output_list=""
204	package_list=""
205	punkte="..........................................................."
206	queue=none
207	read_from_config=""
208	restart_run=false
209	return_addres=$(nslookup `hostname` 2>&1 \| grep "Address:" \| tail -1 \| awk '{print $2}')
210	if [[ $return_addres = 130.75.105.158 ]]
211	then
212	return_addres=172.20.25.41
213	echo "+++ WARNING: return_addres changed to $return_addres !!!!!"
214	fi
215	# if [[ $return_addres = 210.117.65.1 ]]
216	# if [[ $(nslookup `hostname` 2>&1 \| grep -c 210.117.65.1) = 1 ]]
217	# then
218	# [[ $localhost_realname = gfdl3.yonsei.ac.kr ]] && return_addres=165.132.26.56
219	# fi
220	return_password=""
221	return_username=$LOGNAME
222	remotecall=false
223	remote_username=""
224	run_coupled_model=false
225	run_mode=""
226	scirocco=false
227	store_on_archive_system=true
228	striche=" ----------------------------------------------------------------------------"
229	silent=false
230	source_list=""
231	source_path=SOURCE
232	tasks_per_node=""
233	threads_per_task=1
234	tmpcreate=false
235	tmp_data_catalog=""
236	transfer_problems=false
237	usern=$LOGNAME
238	working_directory=`pwd`
239	TOPT=""
240	XOPT=""
241	zeit=$( date \| cut -c 12-19 )
242
243	typeset -i iec=0 iic=0 iin=0 ioc=0 iout=0 memory=0 stagein_anz=0 stageout_anz=0
244	typeset -i cputime i ii iii icycle inode ival jobges jobsek maxcycle minuten nodes pes sekunden tp1
245
246	typeset -R30 calltime
247	typeset -L20 spalte1
248	typeset -L40 spalte2
249	typeset -L60 spalte3
250	typeset -L35 string1=`date`
251	typeset -L12 string2=$usern
252	typeset -L12 string3=$localhost_realname
253	typeset -L12 string4
254	typeset -L12 string5
255	typeset -L30 version="MRUN 2.0 Rev$Rev: 126 $"
256
257
258
259	# EINZELNE VARIABLE FUER HAUPTPROGRAMM EXPORTIEREN
260	export cpurest fname host localhost return_addres return_username remotecall tasks_per_node
261
262	# FOLGENDE VARIABLEN MUESSEN FUER DIE INTERPRETATION DER KONFIGURATIONSDATEI
263	# EXPORTIERT WERDEN
264	export afname config_file cpp_opts cpumax do_batch do_trace fname fromhost
265	export input_list memory numprocs output_list queue run_mode
266
267
268
269	# FEHLERBEHANDLUNG
270	# BEI EXIT:
271	trap 'rm -rf $working_directory/tmp_mrun
272	if [[ $locat != localhost ]]
273	then
274	# if [[ ! -f ${mrun_path}/statistik/mrun_statistik ]]
275	# then
276	# cat > ${mrun_path}/statistik/mrun_statistik << %STATEND%
277	#MRUN-calls on $localhost
278	#
279	#date and time user localhost remotehost termination mrun-command
280	#--------------------------------------------------------------------------------------------------------------------
281	#%STATEND%
282	# chmod 666 ${mrun_path}/statistik/mrun_statistik
283	# fi
284	#
285	# # EINTRAG IN DIE STATISTIK-DATEI
286	# string4=$host
287	# string5=$locat
288	# if [[ "$job_on_file" = "" && $locat != control_c && $locat != user_abort ]]
289	# then
290	# if [[ $do_batch = true ]]
291	# then
292	# printf "$string1$string2$string3$string4$string5$mrun_com \n" >> ${mrun_path}/statistik/mrun_statistik
293	# else
294	# printf "$string1$string2$string3$string4$string5$mc \n" >> ${mrun_path}/statistik/mrun_statistik
295	# fi
296	# fi
297	echo " " > /dev/null
298	fi
299
300	if [[ $locat != normal && $locat != control_c && $locat != local_compile ]]
301	then
302
303	# EVENTUELLE ERROR-KOMMANDOS ABARBEITEN
304	(( i = 0 ))
305	while (( i < iec ))
306	do
307	(( i = i + 1 ))
308	printf "\n *** Execution of ERROR-command:\n"
309	printf " >>> ${err_command[$i]}\n"
310	eval ${err_command[$i]}
311	done
312	if [[ -n $interpreted_config_file ]] then
313	rm -rf $interpreted_config_file
314	fi
315	if [[ -n .mrun_environment ]] then
316	rm -rf .mrun_environment
317	fi
318	if [[ $tmpcreate = true ]]
319	then
320	printf "\n *** Contents of \"$TEMPDIR\":\n"
321	ls -al; cd
322	[[ $delete_temporary_catalog = true ]] && rm -rf $TEMPDIR
323	fi
324	if [[ -f ~/job_queue/JOBINFO.$QSUB_REQID ]]
325	then
326	rm -rf ~/job_queue/JOBINFO.$QSUB_REQID
327	fi
328	printf "\n\n+++ MRUN killed \n\n"
329	elif [[ $locat != control_c ]]
330	then
331	printf "\n\n --> all actions finished\n\n"
332	printf " Bye, bye $usern !!\n\n"
333	fi' exit
334
335
336	# BEI TERMINAL-BREAK:
337	trap 'rm -rf $working_directory/tmp_mrun
338	[[ $tmpcreate = true ]] && (cd; rm -rf $TEMPDIR)
339	if [[ -f ~/job_queue/JOBINFO.$QSUB_REQID ]]
340	then
341	rm -rf ~/job_queue/JOBINFO.$QSUB_REQID
342	fi
343	printf "\n+++ MRUN killed by \"^C\" \n\n"
344	locat=control_c
345	exit
346	' 2
347
348
349	# CHECK IF THE PATH FOR THE PALM BINARIES (SCRIPTS+UTILITY-PROGRAMS) HAS
350	# BEEN SET
351	if [[ "$PALM_BIN" = "" ]]
352	then
353	printf "\n +++ environment variable PALM_BIN has not been set"
354	printf "\n please set it to the directory where the PALM scripts are located"
355	locat=palm_bin; exit
356	fi
357
358
359
360	# SHELLSCRIPT-OPTIONEN EINLESEN UND KOMMANDO NEU ZUSAMMENSETZEN, FALLS ES
361	# FUER FOLGEJOBS BENOETIGT WIRD
362	while getopts :a:AbBc:Cd:D:Fg:G:h:H:i:IkK:m:M:n:o:Op:P:q:r:R:s:St:T:u:U:vxX:Y option
363	do
364	case $option in
365	(a) afname=$OPTARG;;
366	(A) store_on_archive_system=false; mc="$mc -A";;
367	(b) do_batch=true; mc="$mc -b";;
368	(B) delete_temporary_catalog=false; mc="$mc -B";;
369	(c) config_file=$OPTARG; mc="$mc -c$OPTARG";;
370	(C) restart_run=true; mc="$mc -C";;
371	(d) fname=$OPTARG; mc="$mc -d$OPTARG";;
372	(D) cpp_opts="$cpp_opts $OPTARG"; mc="$mc -D$OPTARG";;
373	(F) job_on_file="-D"; mc="$mc -F";;
374	(g) group_number=$OPTARG; mc="$mc -g$OPTARG";;
375	(G) global_revision=$OPTARG; mc="$mc -G'$OPTARG'";;
376	(h) host=$OPTARG; mc="$mc -h$OPTARG";;
377	(H) fromhost=$OPTARG; mc="$mc -H$OPTARG";;
378	(i) input_list=$OPTARG; mc="$mc -i'$OPTARG'";;
379	(I) ignore_archive_error=true; mc="$mc -I";;
380	(k) keep_data_from_previous_run=true; mc="$mc -k";;
381	(K) additional_conditions="$OPTARG"; mc="$mc -K$OPTARG";;
382	(m) memory=$OPTARG; mc="$mc -m$OPTARG";;
383	(M) makefile=$OPTARG; mc="$mc -M$OPTARG";;
384	(n) node_usage=$OPTARG; mc="$mc -n$OPTARG";;
385	(o) output_list=$OPTARG; mc="$mc -o'$OPTARG'";;
386	(O) use_openmp=true; mc="$mc -O";;
387	(p) package_list=$OPTARG; mc="$mc -p'$OPTARG'";;
388	(P) return_password=$OPTARG; mc="$mc -P$OPTARG";;
389	(q) queue=$OPTARG; mc="$mc -q$OPTARG";;
390	(r) run_mode=$OPTARG; mc="$mc -r'$OPTARG'";;
391	(R) remotecall=true;return_addres=$OPTARG; mc="$mc -R$OPTARG";;
392	(s) source_list=$OPTARG; mc="$mc -s'$OPTARG'";;
393	(S) read_from_config=false; mc="$mc -S";;
394	(t) cpumax=$OPTARG; mc="$mc -t$OPTARG";;
395	(T) tasks_per_node=$OPTARG; mc="$mc -T$OPTARG";;
396	(u) remote_username=$OPTARG; mc="$mc -u$OPTARG";;
397	(U) return_username=$OPTARG; mc="$mc -U$OPTARG";;
398	(v) silent=true; mc="$mc -v";;
399	(x) do_trace=true;set -x; mc="$mc -x";;
400	(X) numprocs=$OPTARG; mc="$mc -X$OPTARG";;
401	(Y) run_coupled_model=true; mc="$mc -Y";;
402	(\?) printf "\n +++ unknown option $OPTARG \n"
403	printf "\n --> type \"$0 ?\" for available options \n"
404	locat=parameter;exit;;
405	esac
406	done
407
408
409	# EVTL. POSITIONSPARAMETER EINLESEN
410	# ZUR ZEIT GIBT ES NUR DEN PARAMETER ? (=KURZINFO)
411	shift OPTIND-1
412
413
414	# KURZE AUFRUFBESCHREIBUNG WIRD HIER AUSGEGEBEN
415	if [[ "$1" = "?" ]]
416	then
417	(printf "\n *** mrun can be called as follows:\n"
418	printf "\n $mrun_script_name -b -c.. -d.. -D.. -f.. -F -h.. -i.. -I -K.. -m.. -o.. -p.. -r.. -R -s.. -t.. -T.. -v -x -X.. <modus>\n"
419	printf "\n Description of available options:\n"
420	printf "\n Option Description Default-Value"
421	printf "\n -a base name of input files equiv. -d"
422	printf "\n -A no archiving when using file-attribute fl"
423	printf "\n -b batch-job on local machine ---"
424	printf "\n -B do not delete temporary directory at end ---"
425	printf "\n -c configuration file .mrun.config"
426	printf "\n -d base name of files attached to program test"
427	printf "\n -D preprocessor(cpp)-directives \"\" "
428	printf "\n -F create remote job file only ---"
429	printf "\n -h execution host $localhost_realname"
430	printf "\n -i INPUT control list \"\" "
431	printf "\n -I archiving errors of previous batch-jobs"
432	printf "\n will be ignored"
433	printf "\n -k keep data from previous run"
434	printf "\n -K additional conditions for controling"
435	printf "\n usage of conditional code and"
436	printf "\n env-variables in configuration file \"\" "
437	printf "\n -m memory demand in MB (batch-jobs) 0 MB"
438	printf "\n -M Makefile name Makefile"
439	printf "\n -n node usage (shared/not_shared) depending on -h"
440	printf "\n -o OUTPUT control list \"\" "
441	printf "\n -O use OpenMP ---"
442	printf "\n -p software package list \"\" "
443	printf "\n -q queue \"$queue\" "
444	printf "\n -r run control list (combines -i -o) \"\" "
445	printf "\n -s filenames of routines to be compiled \"\" "
446	printf "\n must end with .f, .f90, .F, or .c !"
447	printf "\n use \"..\" for more than one file and wildcards"
448	printf "\n -s TEST compiles all files with w-permit"
449	printf "\n -S config file interpreted by shellscript ---"
450	printf "\n -t allowed cpu-time in seconds (batch) 0"
451	printf "\n -T tasks per node depending on -h"
452	printf "\n -u username on remote machine \"\" "
453	printf "\n -v no prompt for confirmation ---"
454	printf "\n -x tracing of mrun for debug purposes ---"
455	printf "\n -X # of processors (on parallel machines) 1"
456	printf "\n -Y run coupled model ---"
457	printf "\n "
458	printf "\n Possible values of positional parameter <modus>:"
459	printf "\n \"?\" - this outline \n\n") \| more
460	exit
461	elif [[ "$1" != "" ]]
462	then
463	printf "\n +++ positional parameter $1 unknown \n"
464	locat=parameter; exit
465	fi
466
467
468
469	# KURZE STARTMELDUNG
470	printf "\n*** $version "
471	printf "\n will be executed. Please wait ..."
472
473
474
475	# PRUEFEN, OB KONFIGURATIONS-DATEI VORHANDEN
476	if [[ ! -f $config_file ]]
477	then
478	printf "\n\n +++ configuration file: "
479	printf "\n $config_file"
480	printf "\n does not exist"
481	locat=connect; exit
482	fi
483
484
485	# HOST-IDENTIFIER (local_host) AUS KONFIGURATIONSDATEI BESTIMMEN
486	line=""
487	grep "%host_identifier" $config_file > tmp_mrun
488	while read line
489	do
490	if [[ "$line" != "" \|\| $(echo $line \| cut -c1) != "#" ]]
491	then
492	HOSTNAME=`echo $line \| cut -d" " -s -f2`
493	host_identifier=`echo $line \| cut -d" " -s -f3`
494	if [[ $localhost_realname = $HOSTNAME ]]
495	then
496	localhost=$host_identifier
497	break
498	fi
499	fi
500	done < tmp_mrun
501
502	if [[ "$localhost" = "" ]]
503	then
504	printf "\n\n +++ no host identifier found in configuration file \"$config_file\""
505	printf "\n for local host \"$localhost_realname\"."
506	printf "\n Please add line"
507	printf "\n \"\%host_identifier $localhost_realname <identifier>\""
508	printf "\n to the configuration file."
509	locat=localhost; exit
510	fi
511
512
513
514	# HOSTSPEZIFISCHE VARIABLEN SETZEN
515	case $localhost_realname in
516	(breg-en0\|berni-en0) archive_system=tivoli;;
517	(cs*) archive_system=ut;;
518	(fimm.bccs.uib.no) fimm=true;;
519	(gate\|n-sx) PATH=$PALM_BIN:$PATH:/usr/bin/nqsII;;
520	(hreg-en0\|hanni-en0) archive_system=tivoli;;
521	(scirocco) scirocco=true;;
522	esac
523
524
525
526	# BASISNAME DER INPUT-DATEIEN GLEICH ALLGEMEINEM BASISNAMEN SETZEN,
527	# WENN NICHT VOM BENUTZER ANDERS BESTIMMT
528	[[ "$afname" = "" ]] && afname=$fname
529
530
531	# EVTL. RUN-MODUS DEN I/O-LISTEN HINZUFUEGEN
532	if [[ "$run_mode" != "" ]]
533	then
534	input_list="$input_list $run_mode"
535	output_list="$output_list $run_mode"
536	fi
537
538
539	# RECHNERNAMEN ABSPEICHERN, VON DEM AUS JOB GESTARTET WIRD,
540	# ALLERDINGS NUR DANN, WENN NICHT PER OPTION -H BEREITS EIN WERT
541	# ZUGEWIESEN WURDE (MRUN MACHT DIES IMMER, WENN ES SELBST BATCH-JOBS
542	# STARTET)
543	if [[ "$fromhost" = "" ]]
544	then
545	fromhost=$localhost
546	fi
547
548
549	# PRUEFEN, OB MRUN NUR TESTWEISE AUF DER LOKALEN MASCHINE KOMPILIEREN SOLL
550	if [[ "$source_list" = LOCAL_COMPILE_TEST ]]
551	then
552	source_list=TEST
553	local_compile=true
554	host=$localhost
555	fi
556
557
558	# PRUEFEN, OB AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL
559	# WERT VON do_remote WIRD FUER DATEIVERBINDUNGEN BENOETIGT.
560	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
561	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
562	if [[ -n $host && "$host" != $localhost ]]
563	then
564	do_batch=true
565	do_remote=true
566	case $host in
567	(ibm\|ibmb\|ibmh\|ibms\|ibmy\|nech\|neck\|lctit\|unics) true;;
568	(*) printf "\n"
569	printf "\n +++ sorry: execution of batch jobs on remote host \"$host\""
570	printf "\n is not available"
571	locat=nqs; (( iec = 0 )); exit;;
572	esac
573	else
574	host=$localhost
575	fi
576
577
578	# ZUSATZBEDINGUNGEN (OPTION -K) AUSWERTEN
579	if [[ -n $additional_conditions ]]
580	then
581	# echo $additional_conditions \| cut -d" " -f1-3 \| read cond1 cond2 dummy
582	cond1=`echo $additional_conditions \| cut -d" " -f1`
583	cond2=`echo $additional_conditions \| cut -d" " -s -f2`
584	dummy=`echo $additional_conditions \| cut -d" " -s -f3`
585	if [[ -n $dummy ]]
586	then
587	printf "\n +++ more than 2 additional conditions given for Option \"-K\""
588	locat=options; exit
589	fi
590	fi
591
592
593	# PRUEFEN, OB EVTL. BEI VORHERGEHENDEM LAUF (KETTENJOB) EINE
594	# ARCHIVIERUNG FEHLGESCHLAGEN IST
595	if [[ -f ~/job_queue/ARCHIVE_ERROR_$fname ]]
596	then
597	if [[ $ignore_archive_error = false ]]
598	then
599	printf "\n +++ data archiving of previous run failed"
600	printf "\n see directory \~/job_queue on remote machine"
601	locat=archive; exit
602	else
603	printf "\n +++ warning: data archiving in a previous run failed"
604	printf "\n MRUN continues, trying to get backup copy"
605	fi
606	fi
607
608
609
610	# LESEN UND INTERPRETIEREN DER KONFIGURATIONS-DATEI VOM SHELLSCRIPT AUS
611	# VORUEBERGEHEND ZWINGEND AUF LINUX-RECHNERN
612	if [[ "$read_from_config" = false ]]
613	then
614
615	[[ $silent = false ]] && printf "\n Reading the configuration file... "
616	while read zeile
617	do
618	[[ $silent = false ]] && printf "."
619
620
621	# ZUERST EVENTUELL VORKOMMENDE ENVIRONMENT-VARIABLEN DURCH IHRE WERTE
622	# ERSETZEN
623	eval zeile=\"$zeile\"
624
625
626	# INTERPRETATION DER ZEILE
627	if [[ "$(echo $zeile)" = "" ]]
628	then
629	# LEERZEILE, KEINE AKTION
630	continue
631
632	elif [[ "$(echo $zeile \| cut -c1)" = "#" ]]
633	then
634
635	# ZEILE IST KOMMENTARZEILE
636	true
637
638	elif [[ "$(echo $zeile \| cut -c1)" = "%" ]]
639	then
640
641	# ZEILE DEFINIERT ENVIRONMENT-VARIABLE
642	zeile=$(echo $zeile \| cut -c2-)
643	# echo $zeile \| cut -d" " -f1-5 \| read var value for_host for_cond1 for_cond2
644	var=`echo $zeile \| cut -d" " -f1`
645	value=`echo $zeile \| cut -d" " -s -f2`
646	for_host=`echo $zeile \| cut -d" " -s -f3`
647	for_cond1=`echo $zeile \| cut -d" " -s -f4`
648	for_cond2=`echo $zeile \| cut -d" " -s -f5`
649
650	if [[ "$for_host" = "" \|\| ( "$for_host" = $host && "$for_cond1" = "$cond1" && "$for_cond2" = "$cond2" ) \|\| $(echo "$input_list$output_list"\|grep -c "$for_host") != 0 ]]
651	then
652
653	# BEI COMPILER- CPP- ODER LINKEROPTIONEN EVTL ":" DURCH " "
654	# ERSETZEN. "::" WIRD DURCH ":" ERSETZT.
655	value=`echo $value \| sed 's/::/%DUM%/g' \| sed 's/:/ /g' \| sed 's/%DUM%/:/g'`
656
657
658	# ENVIRONMENT-VARIABLE WIRD WERT AUS KONFIGURATIONSDATEI
659	# ZUGEWIESEN, WENN SIE SELBST NOCH KEINEN WERT UEBER DIE
660	# ENTSPRECHENDE SCRIPT-OPTION ERHALTEN HAT. SOLCHE
661	# VARIABLEN HAETTEN DANN DEN WERT "" ODER IM INTEGER-FALL DEN
662	# WERT 0. ALLGEMEINE REGEL ALSO: SCRIPT-OPTION GEHT UEBER
663	# KONFIGURATIONSDATEI
664	if [[ "$(eval echo \$$var)" = "" \|\| "$(eval echo \$$var)" = "0" ]]
665	then
666	eval $var=\$value
667
668	# EVTL. BILDSCHIRMAUSGABEN DER ENVIRONMENT-VARIABLEN
669	if [[ $do_trace = true ]]
670	then
671	printf "\n*** ENVIRONMENT-VARIABLE $var = $value"
672	fi
673	fi
674
675	# WENN ENVIRONMENT-VARIABLE HOST VEREINBART, DANN SOFORT AUSWERTEN
676	# WERT VON do-remote WIRD BEI DATEIVERBINDUNGEN BENOETIGT
677	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
678	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
679	if [[ $var = host ]]
680	then
681	if [[ -n $host && "$host" != $localhost ]]
682	then
683	do_batch=true
684	do_remote=true
685	case $host in
686	(ibm\|ibms\|ibmy\|lctit\|nech\|neck\|unics) true;;
687	(*) printf "\n +++ sorry: execution of batch jobs on remote host \"$host\""
688	printf "\n is not available"
689	locat=nqs; exit;;
690	esac
691	else
692	host=$localhost
693	fi
694	fi
695
696	# VOM BENUTZER DEFINIERTE ENVIRONMENT VARIABLEN MUESSEN PRINZIPIELL
697	# EXPORTIERT WERDEN, DA SIE VIELLEICHT IN WEITER UNTEN AUFZURUFEN-
698	# DEN PROGRAMMEN BENOETIGT WERDEN
699	export $var
700	fi
701
702
703
704
705	elif [[ "$(echo $zeile \| cut -c1-3)" = "EC:" ]]
706	then
707
708	# ZEILE DEFINIERT ERROR-KOMMANDO
709	(( iec = iec + 1 ))
710	zeile=$(echo $zeile \| cut -c4-)
711	err_command[$iec]="$zeile"
712
713	elif [[ "$(echo $zeile \| cut -c1-3)" = "IC:" ]]
714	then
715
716	# ZEILE DEFINIERT INPUT-KOMMANDO
717	(( iic = iic + 1 ))
718	zeile=$(echo $zeile \| cut -c4-)
719	in_command[$iic]="$zeile"
720
721	elif [[ "$(echo $zeile \| cut -c1-3)" = "OC:" ]]
722	then
723
724	# ZEILE DEFINIERT OUTPUT-KOMMANDO
725	(( ioc = ioc + 1 ))
726	zeile=$(echo $zeile \| cut -c4-)
727	out_command[$ioc]="$zeile"
728
729	else
730
731	# ZEILE DEFINIERT DATEIVERBINDUNG. EINLESEN DER DATEIEIGENSCHAFTEN
732	# s2a: in/out - Feld
733	# s2b: loc - Feld (optional)
734	# s2c: tr/ar - Feld (optional)
735	# echo $zeile \| cut -d" " -f1-2 \| read s1 s2
736	s1=`echo $zeile \| cut -d" " -f1`
737	s2=`echo $zeile \| cut -d" " -s -f2`
738	s2a=$(echo $s2 \| cut -d":" -f1)
739	if [[ $(echo $s2 \| grep -c ":") = 0 ]]
740	then
741	s2b=""
742	s2c=""
743	else
744	# echo $s2 \| cut -d":" -f2-3 \| sed 's/:/ /g' \| read s2b s2c
745	s2b=`echo $s2 \| cut -d":" -f2 \| sed 's/:/ /g'`
746	s2c=`echo $s2 \| cut -d":" -s -f3 \| sed 's/:/ /g'`
747	fi
748	# echo $zeile \| cut -d" " -f3-6 \| read s3 s4 s5 s6
749	s3=`echo $zeile \| cut -d" " -f3`
750	s4=`echo $zeile \| cut -d" " -s -f4`
751	s5=`echo $zeile \| cut -d" " -s -f5`
752	s6=`echo $zeile \| cut -d" " -s -f6`
753
754
755	# ABSPEICHERN DER DATEIVERBINDUNG, FALLS IN INPUT- ODER OUTPUT-LIST
756	# VERMERKT. VARIABLE S3 KANN AUCH LISTE ENTHALTEN (FELDTRENNER ":")
757	# DATEIVERBINDUNG WIRD DANN NICHT ABGESPEICHERT UND GEPRUEFT, WENN
758	# PROGRAMMLAUF AUF REMOTE-MASCHINE ERFOLGT UND DATEI NUR LOKAL VOR-
759	# HANDEN SEIN MUSS (D.H. s2b = loc)
760	IFSALT="$IFS"; IFS="$IFS:"
761	if [[ "$s2a" = in && ! ( $do_remote = true && ( "$s2b" = loc \|\| "$s2b" = locopt ) ) ]]
762	then
763	found=false
764	for actual in $input_list
765	do
766	for formal in $s3
767	do
768	[[ $actual = $formal \|\| "$formal" = "-" ]] && found=true
769	done
770	done
771	if [[ $found = true ]]
772	then
773	(( iin = iin + 1 ))
774	localin[$iin]=$s1; transin[$iin]=$s2b; actionin[$iin]=$s2c;
775	typein[$iin]=$s3; pathin[$iin]=$s4; endin[$iin]=$s5;
776	extin[$iin]=$s6
777	fi
778	elif [[ "$s2a" = out && ! ( $do_remote = true && "$s2b" = loc ) ]]
779	then
780	found=false
781	for actual in $output_list
782	do
783	for formal in $s3
784	do
785	[[ $actual = $formal \|\| "$formal" = "-" ]] && found=true
786	done
787	done
788	if [[ $found = true ]]
789	then
790	(( iout = iout + 1 ))
791	localout[$iout]=$s1; actionout[$iout]=$s2c; typeout[$iout]=$s3;
792	pathout[$iout]=$s4; endout[$iout]=$s5; extout[$iout]=$s6
793	fi
794	elif [[ "$s2a" != in && "$s2a" != out ]]
795	then
796	printf "\n +++ I/O-attribute in configuration file $config_file has the invalid"
797	printf "\n value \"$s2\". Only \"in\" and \"out\" are allowed!"
798	locat=connect; exit
799	fi
800	IFS="$IFSALT"
801	fi
802	done < $config_file
803
804	else
805
806
807	# INTERPRETATION DER KONFIGURATIONSDATEI MITTELS FORTRAN 90 - PROGRAMM
808	[[ $silent = false ]] && printf "..."
809	export cond1 cond2 config_file do_remote do_trace input_list localhost output_list
810	export interpreted_config_file=.icf.$RANDOM
811
812
813
814	# ENVIRONMENT-VARIABLEN FUER INTERPRET_CONFIG UEBER NAMELIST_DATEI ZUR
815	# VERFUEGUNG STELLEN
816	cat > .mrun_environment << %%END%%
817	&mrun_environment cond1 = '$cond1', cond2 = '$cond2',
818	config_file = '$config_file', do_remote = '$do_remote',
819	do_trace = '$do_trace', host = '$host',
820	input_list = '$input_list', icf = '$interpreted_config_file',
821	localhost = '$localhost', output_list = '$output_list' /
822
823	%%END%%
824
825	# WERTE VON MRUN-OPTIONEN SICHERN UND DAMIT GEGEBENENFALLS SPAETER DIE
826	# IN DER KONFIGURAIONSDATEI ANGEGEBENEN WERTE UEBERSTEUERN
827	mrun_memory=$memory
828	mrun_cpumax=$cpumax
829	mrun_numprocs=$numprocs
830
831	if [[ $localhost_realname = "gate" ]]
832	then
833	interpret_config_gate.x
834	else
835	interpret_config.x
836	fi
837	rm .mrun_environment
838
839
840	# AUSFUEHRUNG DER GENERIERTEN SHELL-KOMMANDOS IN DIESER SHELL
841	chmod u+x $interpreted_config_file
842	export PATH=$PATH:.
843	. $interpreted_config_file
844	rm $interpreted_config_file
845
846
847	# OPTIONSWERTE UEBERSTEUERN KONFIGURATIONSDATEI
848	[[ $mrun_memory != 0 ]] && memory=$mrun_memory
849	[[ $mrun_cpumax != 0 ]] && cpumax=$mrun_cpumax
850	[[ "$mrun_numprocs" != "" ]] && numprocs=$mrun_numprocs
851
852	fi
853
854
855	# QUELLTEXTVERZEICHNIS AUF LOKALER MASCHINE AUS KONFIGURATIONSDATEI
856	# BESTIMMEN (WUERDE SONST EVTL. DAS VERZEICHNIS DES JEWEILS UNTER -h
857	# ANGEGEBENEN REMOTE-RECHNERS SEIN)
858	# BEI BATCH-JOBS SIND DIE ZU UEBERSETZENDEN PROGRAMMTEILE SCHON KOMPLETT
859	if [[ "$SOURCES_COMPLETE" = "" ]]
860	then
861
862	# ZUERST PRUEFEN, OB EIN GLOBALER QUELLTEXTPFAD FUER ALLE RECHNER
863	# VEREINBART WURDE
864	source_path=""
865	line=""
866	grep "%source_path" $config_file > tmp_mrun
867	while read line
868	do
869	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
870	then
871	if [[ "$(echo $line \| cut -d" " -f3)" = "" ]]
872	then
873	global_source_path=`echo $line \| cut -d" " -f2`
874	fi
875	fi
876	done < tmp_mrun
877
878	line=""
879	found=false
880	grep " $localhost" $config_file \| grep "%source_path" > tmp_mrun
881	while read line
882	do
883	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
884	then
885	if [[ $found = true ]]
886	then
887	printf "\n\n +++ more than one source path found in configuration file"
888	printf "\n for local host \"$localhost\" "
889	locat=source_path; exit
890	fi
891	source_path=`echo $line \| cut -d" " -f2`
892	found=true
893	fi
894	done < tmp_mrun
895	rm tmp_mrun
896
897	if [[ "$source_path" = "" ]]
898	then
899	if [[ "$global_source_path" != "" ]]
900	then
901	source_path=$global_source_path
902	else
903	printf "\n\n +++ no source path found in configuration file"
904	printf "\n for local host \"$localhost\" "
905	locat=source_path; exit
906	fi
907	fi
908	eval source_path=$source_path
909
910	if [[ ! -d $source_path ]]
911	then
912	printf "\n\n +++ source path \"$source_path\" on local host"
913	printf "\n \"$localhost\" does not exist"
914	locat=source_path; exit
915	fi
916
917	fi
918
919
920	# GLOBALE REVISIONSNUMMER ERMITTELN (FORTSETZUNGSLAEUFEN WIRD DIESE
921	# DURCH OPTION -G MITGETEILT)
922	if [[ "$global_revision" = "" ]]
923	then
924	global_revision=`svnversion $source_path 2>/dev/null`
925	global_revision="Rev: $global_revision"
926	fi
927
928
929	# NOCHMAL PRUEFEN, OB AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL
930	# (HOST KANN IN KONFIGURATIONSDATEI ANDERS FESTGELEGT WORDEN SEIN)
931	# WERT VON do_remote WIRD FUER DATEIVERBINDUNGEN BENOETIGT.
932	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
933	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
934	if [[ -n $host && "$host" != $localhost ]]
935	then
936	do_batch=true
937	do_remote=true
938	case $host in
939	(ibm\|ibmb\|ibmh\|ibms\|ibmy\|lctit\|nech\|neck\|unics) true;;
940	(*) printf "\n"
941	printf "\n +++ sorry: execution of batch jobs on remote host \"$host\""
942	printf "\n is not available"
943	locat=nqs; (( iec = 0 )); exit;;
944	esac
945	else
946	host=$localhost
947	fi
948
949
950	# PRUEFUNG EINIGER PROZESSORZAHLANGABEN BEI RECHNUNGEN AUF PARALLELRECHNERN
951	if [[ "$cond1" = parallel \|\| "$cond2" = parallel ]]
952	then
953
954	# PRUEFEN, OB DIE ANZAHL DER ZU VERWENDENDEN PES ANGEGEBEN WURDE
955	if [[ ! -n $numprocs ]]
956	then
957	printf "\n"
958	printf "\n +++ option \"-K parallel\" requires additional specification"
959	printf "\n of the number of processors to be used by"
960	printf "\n mrun-option \"-X\" or by environment-variable"
961	printf "\n \"numprocs\" in the configuration file"
962	locat=numprocs; (( iec = 0 )); exit
963	fi
964
965	# PRUEFEN, OB DIE PROZESSORANZAHL PRO KNOTEN ANGEGEBEN WURDE (GGF.
966	# DEFAULT-WERT SETZEN) UND OB SIE EIN GANZZAHLIGER TEILER DER
967	# GESAMTPROZESSORANZAHL IST
968	if [[ $host = nech \|\| $host = neck \|\| $host = ibmh \|\| $host = ibmb \|\| $host = ibms ]]
969	then
970	[[ "$tasks_per_node" = "" ]] && tasks_per_node=6
971	(( ival = $tasks_per_node ))
972	(( pes = numprocs ))
973	# if [[ $(echo $package_list \| grep -c dvrp_graphics+1PE) = 1 ]]
974	# then
975	# (( pes = pes - 1 ))
976	# fi
977	(( ii = pes / ival ))
978	if (( pes - ii * ival > 0 ))
979	then
980	printf "\n"
981	printf "\n +++ tasks per node (option \"-T\") must be an integral"
982	printf "\n divisor of the total number of processors (option \"-X\")"
983	printf "\n values of this mrun-call: \"-T $tasks_per_node\" \"-X $numprocs\""
984	locat=tasks_per_node; (( iec = 0 )); exit
985	fi
986	fi
987
988	# IBMY HAT NUR EINEN KNOTEN
989	if [[ $host = ibmy ]]
990	then
991	if [[ "$tasks_per_node" != "" && "$tasks_per_node" != "$numprocs" ]]
992	then
993	printf "\n"
994	printf "\n +++ on ibmy, tasks per node (option \"-T\") must be equal to the"
995	printf "\n total number of processors (option \"-X\")"
996	printf "\n values of this mrun-call: \"-T $tasks_per_node\" \"-X $numprocs\""
997	locat=tasks_per_node; (( iec = 0 )); exit
998	fi
999	fi
1000
1001	# FALLS OPENMP PARALLELISIERUNG VERWENDET WERDEN SOLL, ANZAHL VON THREADS
1002	# SETZEN UND ZAHL DER TASKS PRO KNOTEN AUF 1 SETZEN
1003	if [[ $use_openmp = true ]]
1004	then
1005	threads_per_task=$tasks_per_node
1006	tasks_per_node=1
1007	fi
1008	OOPT="-O $threads_per_task"
1009	TOPT="-T $tasks_per_node"
1010
1011	# GESAMTZAHL DER KNOTEN BESTIMMEN
1012	if [[ "$tasks_per_node" != "" ]]
1013	then
1014	(( nodes = numprocs / ( tasks_per_node * threads_per_task ) ))
1015	fi
1016
1017	# PRUEFEN, OB NODE USAGE EINEN ERLAUBTEN WERT HAT BZW. DEN DEFAULT
1018	# SETZEN
1019	if [[ $node_usage = default ]]
1020	then
1021	if [[ $host = ibms ]]
1022	then
1023	node_usage=shared
1024	elif [[ $host = lctit ]]
1025	then
1026	node_usage=novice
1027	else
1028	node_usage=not_shared
1029	fi
1030	fi
1031	if [[ $node_usage != shared && $node_usage != not_shared && "$(echo $node_usage \| cut -c1-3)" != "sla" && $node_usage != novice ]]
1032	then
1033	printf "\n"
1034	printf "\n +++ node usage (option \"-n\") is only allowed to be set"
1035	printf "\n \"shared\" or \"not_shared\""
1036	locat=tasks_per_node; (( iec = 0 )); exit
1037	fi
1038
1039	fi
1040
1041	# PRUEFEN, OB HOSTFILE EXISTIERT
1042	if [[ -n $hostfile ]]
1043	then
1044	if [[ ! -f $hostfile ]]
1045	then
1046	printf "\n"
1047	printf "\n +++ hostfile \"$hostfile\" does not exist"
1048	locat=hostfile; exit
1049	fi
1050	fi
1051
1052	# PRUEFEN, OB RHOSTS DATEI EXISTIERT. GEGEBENENFALLS ANLEGEN BZW. ERWEITERN
1053	if [[ $host = ibmy && $do_remote = false ]]
1054	then
1055	if [[ ! -f $HOME/.rhosts ]]
1056	then
1057	echo "gfdl5.yonsei.ac.kr" > $HOME/.rhosts
1058	printf "\n\n *** file:"
1059	printf "\n $HOME/.rhosts"
1060	printf "\n was created\n"
1061	fi
1062	if [[ $(grep -c gfdl5.yonsei.ac.kr $HOME/.rhosts) = 0 ]]
1063	then
1064	echo "gfdl5.yonsei.ac.kr" >> $HOME/.rhosts
1065	printf "\n\n *** file:"
1066	printf "\n $HOME/.rhosts"
1067	printf "\n was extended by the name of the current host\n"
1068	fi
1069	fi
1070
1071
1072
1073	# FALLS NICHT VORGEGEBEN, DEFAULT-QUEUE AUF DER ZIELMASCHINE FESTLEGEN
1074	if [[ $queue = none ]]
1075	then
1076	case $host in
1077	(ibmb) if [[ $node_usage = shared ]]
1078	then
1079	queue=cshare
1080	else
1081	queue=csolo
1082	fi;;
1083	(ibmh) if [[ $node_usage = shared ]]
1084	then
1085	queue=cshare
1086	else
1087	queue=csolo
1088	fi;;
1089	(ibmy) queue=parallel;;
1090	(lctit) queue=novice;;
1091	(nech) queue=none;;
1092	(neck) queue=P;;
1093	(unics) queue=unics;;
1094	esac
1095	fi
1096
1097
1098	# VOLLSTAENDIGE DATEINAMEN DER INPUT-FILES BILDEN,
1099	# INPUT-DATEIEN AUF VORHANDENSEIN PRUEFEN UND EVTL. HOECHSTE ZYKLUSNUMMER
1100	# ERMITTELN
1101	(( i = 0 ))
1102	while (( i < iin ))
1103	do
1104	(( i = i + 1 ))
1105	(( maxcycle = 0 ))
1106
1107	# NAMENSBILDUNG (EVTL. IST FESTER DATEINAME VORGEGEBEN)
1108	if [[ "${actionin[$i]}" = di ]]
1109	then
1110	remotepathin[$i]=${pathin[$i]}/${endin[$i]} # REMOTE-PFAD ERST AUF
1111	# REM-MASCHINE AUSWERTEN
1112	eval filename=${pathin[$i]}/${endin[$i]}
1113	else
1114	remotepathin[$i]=${pathin[$i]}/${afname}${endin[$i]} # REMOTE-PFAD ERST AUF
1115	# REM-MASCHINE AUSWERTEN
1116	eval filename=${pathin[$i]}/${afname}${endin[$i]}
1117	fi
1118
1119	# PRUEFEN AUF VORHANDENSEIN
1120	if [[ $(ls $filename* 2>&1 \| grep -c "not found") = 1 \|\| \
1121	$(ls $filename* 2>&1 \| grep -c "No such file") = 1 \|\| \
1122	$(ls $filename* 2>&1 \| grep -c "does not exist") = 1 ]]
1123	then
1124	# DATEIEN MIT EXTENSION (Z.B. NC) MUESSEN NICHT ZWINGEND VORHANDEN
1125	# SEIN, DESHALB IN SOLCHEN FAELLEN KEIN ABBRUCH. DIES IST NUR EINE
1126	# VORUEBERGEHENDE LOESUNG (OKT 05). NICHT ZWINGEND BENOETIGTE
1127	# EINGABEDATEIEN SOLLTEN EINE SPEZIELLE OPTION IN DER DATEI-
1128	# VERBINDUNGSANWEISUNG BEKOMMEN (Z.B. inopt?)
1129	if [[ "${transin[$i]}" != "locopt" ]]
1130	then
1131	printf "\n\n +++ INPUT-file: "
1132	if [[ "${extin[$i]}" = "" ]]
1133	then
1134	printf "\n $filename"
1135	else
1136	printf "\n $filename.${extin[$i]}"
1137	fi
1138	printf "\n does not exist\n"
1139	locat=input; exit
1140	else
1141	transin[$i]="unavailable"
1142	fi
1143	else
1144
1145	# ZYKLUSNUMMER FESTSTELLEN
1146	ls -1 -d $filename > filelist 2>/dev/null
1147	ls -1 -d $filename.* >> filelist 2>/dev/null
1148	while read zeile
1149	do
1150	cycle=$(print $zeile \| cut -f2 -d".")
1151	if [[ "$cycle" = "$zeile" ]]
1152	then
1153	(( icycle = 0 ))
1154	elif [[ "$cycle" = "${extin[$i]}" ]]
1155	then
1156	(( icycle = 0 ))
1157	else
1158	(( icycle = $cycle ))
1159	fi
1160	if (( icycle > maxcycle ))
1161	then
1162	(( maxcycle = icycle ))
1163	file_to_be_used=$zeile
1164	fi
1165	done <filelist
1166	rm filelist
1167
1168	# EVTL. ZYKLUSNUMMER AN DATEINAMEN ANFUEGEN
1169	if (( maxcycle > 0 ))
1170	then
1171	if [[ "${extin[$i]}" != " " && "${extin[$i]}" != "" ]]
1172	then
1173	filename=${filename}.$maxcycle.${extin[$i]}
1174	else
1175	filename=${filename}.$maxcycle
1176	fi
1177	else
1178	if [[ "${extin[$i]}" != " " && "${extin[$i]}" != "" ]]
1179	then
1180	filename=${filename}.${extin[$i]}
1181	fi
1182	fi
1183
1184	# DATEINAMEN OHNE PFAD ABER MIT ZYKLUSNUMMER ABSPEICHERN,
1185	# DA SPAETER BEI RUECKSPEICHERN VOM ARCHIVSYSTEM EVTL. BENOETIGT
1186	absnamein[$i]=$filename
1187	if (( maxcycle > 0 ))
1188	then
1189	if [[ "${actionin[$i]}" = di ]]
1190	then
1191	frelin[$i]=${endin[$i]}.$maxcycle
1192	else
1193	frelin[$i]=${afname}${endin[$i]}.$maxcycle
1194	fi
1195	else
1196	if [[ "${actionin[$i]}" = di ]]
1197	then
1198	frelin[$i]=${endin[$i]}
1199	else
1200	frelin[$i]=${afname}${endin[$i]}
1201	fi
1202	fi
1203
1204	fi
1205	done
1206
1207
1208	# VOLLSTAENDIGE DATEINAMEN (OHNE $ ODER ~) DER OUTPUT-FILES BILDEN,
1209	# OUTPUT-DATEIEN AUF VORHANDENSEIN PRUEFEN UND EVTL. HOECHSTE ZYKLUSNUMMER
1210	# ERMITTELN ODER, FALLS NICHT VORHANDEN, PRUEFEN, OB SIE SICH ANLEGEN LASSEN
1211	# DIESE AKTIONEN FINDEN NICHT STATT, WENN PROGRAMM AUF REMOTE-MASCHINE
1212	# RECHNET UND DATEI ANSCHLIESSEND TRANSFERIERT WERDEN SOLL!
1213	(( i = 0 ))
1214	while (( i < iout ))
1215	do
1216	(( i = i + 1 ))
1217	if [[ ! ( $fromhost != $localhost && ( "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = tra \|\| "${actionout[$i]}" = trpe ) ) ]]
1218	then
1219	if [[ "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = trpe ]]
1220	then
1221	actionout[$i]=""
1222	elif [[ "${actionout[$i]}" = tra ]]
1223	then
1224	actionout[$i]=a
1225	fi
1226	(( maxcycle = 0 ))
1227	eval filename=${pathout[$i]}/${fname}${endout[$i]}
1228	eval catalogname=${pathout[$i]}
1229	if [[ $(ls $filename* 2>&1 \| grep -c "not found") = 1 \|\| \
1230	$(ls $filename* 2>&1 \| grep -c "No such file") = 1 \|\| \
1231	$(ls $filename* 2>&1 \| grep -c "does not exist") = 1 ]]
1232	then
1233
1234	# OUTPUT-DATEI NICHT VORHANDEN. PRUEFEN, OB ANLEGEN MOEGLICH.
1235	if cat /dev/null > $filename
1236	then
1237	rm $filename
1238	else
1239
1240	# PRUEFEN, OB KATALOG VORHANDEN UND EVTL. DIESEN ANLEGEN
1241	if [[ ! -d $catalogname ]]
1242	then
1243	if mkdir -p $catalogname
1244	then
1245	printf "\n\n *** directory:"
1246	printf "\n $catalogname"
1247	printf "\n was created\n"
1248	else
1249	printf "\n\n +++ OUTPUT-file:"
1250	printf "\n $filename"
1251	printf "\n cannot be created, because directory does not exist"
1252	printf "\n and cannot be created either"
1253	printf "\n"
1254	locat=output ; exit
1255	fi 2>/dev/null
1256	else
1257	printf "\n\n +++ OUTPUT-file:"
1258	printf "\n $filename"
1259	printf "\n cannot be created, although directory exists"
1260	printf "\n"
1261	locat=output ; exit
1262	fi
1263	fi 2>/dev/null
1264	else
1265
1266	# ZYKLUSNUMMER FESTSTELLEN
1267	ls -1 -d $filename > filelist 2>/dev/null
1268	ls -1 -d $filename.* >> filelist 2>/dev/null
1269	while read zeile
1270	do
1271	cycle=$(print $zeile \| cut -f2 -d".")
1272	if [[ "$cycle" = "$zeile" \|\| "$cycle" = ${extout[$i]} ]]
1273	then
1274	(( icycle = 1 ))
1275	else
1276	(( icycle = $cycle + 1 ))
1277	fi
1278	if (( icycle > maxcycle ))
1279	then
1280	(( maxcycle = icycle ))
1281	fi
1282	done <filelist
1283	rm filelist
1284	fi
1285
1286	# EVTL. ZYKLUSNUMMER AN DATEINAMEN ANFUEGEN UND PRUEFEN, OB SICH
1287	# DATEI AUCH WIRKLICH ANLEGEN LAESST. IM APPEND-FALL MUSS AN DEN
1288	# HOECHSTEN VORHANDENEN ZYKLUS-ANGEHAENGT WERDEN. ANLAGEPRUEFUNG
1289	# IST DANN NATUERLICH NICHT ZULAESSIG BZW. MOEGLICH
1290	if [[ "${actionout[$i]}" != a ]]
1291	then
1292	if (( maxcycle > 0 ))
1293	then
1294	filename=${filename}.$maxcycle
1295	if cat /dev/null > $filename
1296	then
1297	rm $filename
1298	else
1299	printf "\n +++ OUTPUT-file:"
1300	printf "\n $filename"
1301	printf "\n cannot be created"
1302	locat=output ; exit
1303	fi
1304	fi
1305	else
1306	(( maxcycle = maxcycle - 1 ))
1307	if (( maxcycle > 0 ))
1308	then
1309	filename=${filename}.$maxcycle
1310	fi
1311	fi
1312
1313	# DATEINAMEN OHNE PFAD ABER MIT ZYKLUSNUMMER ABSPEICHERN,
1314	# DA SPAETER BEI ABLAGE AUF ARCHIVSYSTEM BZW. FUER
1315	# DATEI OUTPUT_FILE_CONNECTIONS EVTL. BENOETIGT
1316	pathout[$i]=$filename
1317	if (( maxcycle > 0 ))
1318	then
1319	frelout[$i]=${fname}${endout[$i]}.$maxcycle
1320	else
1321	frelout[$i]=${fname}${endout[$i]}
1322	fi
1323
1324	fi
1325	done
1326
1327
1328	# DAS DVRP-PAKET ERFORDERT EINE ENTSPRECHENDE BIBLIOTHEK
1329	if [[ $(echo $package_list \| grep -c dvrp_graphics) != 0 ]]
1330	then
1331	if [[ "$dvrp_inc" = "" ]]
1332	then
1333	printf "\n\n +++ no value for \"dvrp_inc\" given in configuration file"
1334	printf "\n This is required for the dvrp_graphics package.\n"
1335	locat=dvrp; exit
1336	fi
1337	if [[ "$dvrp_lib" = "" ]]
1338	then
1339	printf "\n\n +++ no value for \"dvrp_lib\" given in configuration file"
1340	printf "\n This is required for the dvrp_graphics package.\n"
1341	locat=dvrp; exit
1342	fi
1343	fi
1344
1345
1346	# PRUEFEN, OB ENTWEDER HAUPTPROGRAMM ODER NUR EIN AUSFUEHRBARES
1347	# PROGRAMM VEREINBART WURDE (IN DIESEM FALL BRAUCHT IM WEITEREN NICHT
1348	# UEBERSETZT ZU WERDEN)
1349	if [[ "$mainprog" = "" && "$executable" = "" ]]
1350	then
1351	printf "\n +++ neither main program nor executable defined"
1352	locat=source; exit
1353	elif [[ "$mainprog" != "" && "$executable" != "" ]]
1354	then
1355	printf "\n +++ main program as well as executable defined"
1356	locat=source; exit
1357	elif [[ "$mainprog" = "" && "$executable" != "" ]]
1358	then
1359	do_compile=false
1360	fi
1361
1362
1363	# ALLE ZU UEBERSETZENDEN PROGRAMMTEILE ZUSAMMENSAMMELN
1364	# BEI BATCH-JOBS IST DIES NICHT NOETIG, WEIL DIE PROGRAMMTEILE BEREITS DURCH
1365	# DEN MRUN-AUFRUF ERMITTELT SIND, DER DEN BATCH-JOB GENERIERT HAT, UND
1366	# IM VERZEICHNIS SOURCES_FOR_RUN_... ABGELEGT SIND
1367	if [[ $do_compile = true && "$SOURCES_COMPLETE" = "" ]]
1368	then
1369
1370	[[ "$source_list" = LM ]] && source_list=LOCALLY_MODIFIED
1371	[[ "$source_list" = WP ]] && source_list=WRITE_PERMIT
1372
1373	if [[ $restart_run != true ]]
1374	then
1375	rm -rf SOURCES_FOR_RUN_$fname
1376	mkdir SOURCES_FOR_RUN_$fname
1377	fi
1378
1379
1380	# EVTL. ZU UEBERSETZENDE PROGRAMMTEILE DADURCH BESTIMMEN, DASS GEPRUEFT
1381	# WIRD, WELCHE DATEIEN WRITE-PERMIT BESITZEN (DATEIEN SOLLTEN DESHALB
1382	# UNTER RCS-KONTROLLE STEHEN). MIT DER VARIABLEN EXCLUDE KOENNEN
1383	# BESTIMMTE DATEIEN GRUNDSAETZLICH VON DER UEBERSETZUNG AUSGESCHLOSSEN
1384	# WERDEN. DIES IST NUR BEI MANUELLEM START VON MRUN DURCH DEN BENUTZER
1385	# MOEGLICH, DA BEI AUTOMATISCHEN RESTARTS TEST DURCH DIE TATSAECHLICH
1386	# ZU UBERSETZENDEN DATEIEN ERSETZT IST.
1387	# ALLE ERMITTELTEN DATEIEN WERDEN IM VERZEICHNIS SOURCES_FOR_RUN_...
1388	# GESAMMELT
1389	if [[ "$source_list" = WRITE_PERMIT ]]
1390	then
1391
1392	source_list=""
1393	cd $source_path
1394
1395
1396	# ALLE MOEGLICHEN QUELLCODEDATEIEN AUFLISTEN
1397	Names=$(ls -1 *.f90 2>&1)
1398	[[ $(echo $Names \| grep -c '*.f90') = 0 ]] && Filenames="$Names"
1399	Names=$(ls -1 *.F90 2>&1)
1400	[[ $(echo $Names \| grep -c '*.F90') = 0 ]] && Filenames="$Filenames $Names"
1401	Names=$(ls -1 *.F 2>&1)
1402	[[ $(echo $Names \| grep -c '*.F') = 0 ]] && Filenames="$Filenames $Names"
1403	Names=$(ls -1 *.f 2>&1)
1404	[[ $(echo $Names \| grep -c '*.f') = 0 ]] && Filenames="$Filenames $Names"
1405	Names=$(ls -1 *.c 2>&1)
1406	[[ $(echo $Names \| grep -c '*.c') = 0 ]] && Filenames="$Filenames $Names"
1407
1408
1409	# DATEIEN MIT WRITE-PERMIT NACH SOURCES_FOR_RUN_... KOPIEREN
1410	for dateiname in $Filenames
1411	do
1412	if [[ -w $dateiname ]]
1413	then
1414	if [[ "$exclude" = "" \|\| $(echo $exclude \| grep -c $dateiname) = 0 ]]
1415	then
1416	cp $dateiname $working_directory/SOURCES_FOR_RUN_$fname
1417	source_list=$source_list"$dateiname "
1418	fi
1419	fi
1420	done
1421
1422	cd - > /dev/null
1423
1424
1425	elif [[ "$source_list" = LOCALLY_MODIFIED ]]
1426	then
1427
1428	# MODIFIZIERTE DATEIEN DER SVN-ARBEITSKOPIE BESTIMMEN
1429	source_list=""
1430	cd $source_path
1431
1432
1433	# PRUEFEN, OB VERZEICHNIS UEBERHAUPT UNTER SVN-KONTROLLE STEHT
1434	if [[ ! -d .svn ]]
1435	then
1436	printf "\n\n +++ source directory"
1437	printf "\n \"$source_path\" "
1438	printf "\n is not under control of \"subversion\"."
1439	printf "\n Please do not use mrun-option \"-s LOCALLY MODIFIED\"\n"
1440	fi
1441
1442
1443	# ALLE MODIFIZIERTEN QUELLCODEDATEIEN AUFLISTEN
1444	Filenames=""
1445	svn status > tmp_mrun
1446	while read line
1447	do
1448	firstc=`echo $line \| cut -c1`
1449	if [[ $firstc = M \|\| $firstc = "?" ]]
1450	then
1451	Name=`echo "$line" \| cut -c8-`
1452	extension=`echo $Name \| cut -d. -f2`
1453	if [[ "$extension" = f90 \|\| "$extension" = F90 \|\| "$extension" = f \|\| "$extension" = F \|\| "$extension" = c ]]
1454	then
1455	Filenames="$Filenames "$Name
1456	fi
1457	fi
1458	done < tmp_mrun
1459
1460
1461	# DATEIEN NACH SOURCES_FOR_RUN_... KOPIEREN
1462	for dateiname in $Filenames
1463	do
1464	cp $dateiname $working_directory/SOURCES_FOR_RUN_$fname
1465	source_list=$source_list"$dateiname "
1466	done
1467
1468	cd - > /dev/null
1469
1470
1471	# MITTELS OPTION -s ANGEGEBENE DATEIEN NACH SOURCES_FOR_RUN_... KOPIEREN
1472	# BEI AUTOMATISCHEN FORTSETZUNGSLAEUFEN SIND DORT SCHON ALLE DATEIEN
1473	# VORHANDEN
1474	elif [[ "$source_list" != "" && $restart_run != true ]]
1475	then
1476
1477	cd $source_path
1478
1479	for filename in $source_list
1480	do
1481
1482	# QUELLTEXT-DATEI DARF KEINE PFADE BEINHALTEN
1483	if [[ $(print $filename \| grep -c "/") != 0 ]]
1484	then
1485	printf "\n +++ source code file: $filename"
1486	printf "\n must not contain (\"/\") "
1487	locat=source; exit
1488	fi
1489
1490	if [[ ! -f $filename ]]
1491	then
1492	printf "\n +++ source code file: $filename"
1493	printf "\n does not exist"
1494	locat=source; exit
1495	else
1496	cp $filename $working_directory/SOURCES_FOR_RUN_$fname
1497	fi
1498
1499	done
1500
1501	cd - > /dev/null
1502
1503	fi
1504
1505
1506	# PRUEFEN, OB ENTWEDER HAUPTPROGRAMM VORHANDEN UND ES EVTL. IN DER
1507	# LISTE DER ZU UEBERSETZENDEN PROGRAMMTEILE MIT ENTHALTEN IST (WENN
1508	# NICHT, WIRD ES DIESER LISTE HINZUGEFUEGT)
1509	if [[ $restart_run != true ]]
1510	then
1511
1512	if [[ ! -f "$source_path/$mainprog" ]]
1513	then
1514	printf "\n\n +++ main program: $mainprog"
1515	printf "\n does not exist in source directory"
1516	printf "\n \"$source_path\"\n"
1517	locat=source; exit
1518	else
1519	if [[ $(echo $source_list \| grep -c $mainprog) = 0 ]]
1520	then
1521	cp $source_path/$mainprog SOURCES_FOR_RUN_$fname
1522	source_list=${mainprog}" $source_list"
1523	fi
1524	fi
1525	fi
1526
1527
1528	# DATEIEN AUS ZUSAETZLICHEM QUELLVERZEICHNIS HINZUFUEGEN
1529	if [[ $restart_run != true && "$add_source_path" != "" ]]
1530	then
1531
1532	# GIBT ES DAS VERZEICHNIS UEBERHAUPT?
1533	if [[ ! -d $add_source_path ]]
1534	then
1535	printf "\n\n +++ WARNING: additional source code directory"
1536	printf "\n \"$add_source_path\" "
1537	printf "\n does not exist or is not a directory."
1538	printf "\n No source code will be used from this directory!\n"
1539	add_source_path=""
1540	sleep 3
1541	else
1542
1543	cd $add_source_path
1544
1545	Names=$(ls -1 *.f90 2>&1)
1546	[[ $(echo $Names \| grep -c '*.f90') = 0 ]] && AddFilenames="$Names"
1547	Names=$(ls -1 *.F90 2>&1)
1548	[[ $(echo $Names \| grep -c '*.F90') = 0 ]] && AddFilenames="$AddFilenames $Names"
1549	Names=$(ls -1 *.F 2>&1)
1550	[[ $(echo $Names \| grep -c '*.F') = 0 ]] && AddFilenames="$AddFilenames $Names"
1551	Names=$(ls -1 *.f 2>&1)
1552	[[ $(echo $Names \| grep -c '*.f') = 0 ]] && AddFilenames="$AddFilenames $Names"
1553	Names=$(ls -1 *.c 2>&1)
1554	[[ $(echo $Names \| grep -c '*.c') = 0 ]] && AddFilenames="$AddFilenames $Names"
1555
1556	cd - > /dev/null
1557	cd SOURCES_FOR_RUN_$fname
1558
1559	for dateiname in $AddFilenames
1560	do
1561	if [[ -f $dateiname ]]
1562	then
1563	printf "\n +++ source code file \"$dateiname\" found in additional"
1564	printf "\n source code directory \"$add_source_path\" "
1565	printf "\n as well as in directory \"$source_path\"."
1566	locat=source; exit
1567	fi
1568
1569	cp $add_source_path/$dateiname .
1570	source_list="$source_list $dateiname"
1571
1572	# Default User-Interface von der Liste entfernen, falls Datei
1573	# ein User-Interface enthaelt
1574	if [[ $( cat $dateiname \| grep -c "END SUBROUTINE user_parin" ) != 0 ]]
1575	then
1576	if [[ $dateiname != user_interface.f90 && -f user_interface.f90 ]]
1577	then
1578	rm -rf user_interface.f90
1579	source_list=`echo $source_list \| sed -e 's/user_interface.f90//'`
1580	printf "\n\n *** default \"user_interface.f90\" removed from the files to be translated"
1581	printf "\n since a user-interface is found in file"
1582	printf "\n \"$add_source_path/$dateiname\" \n"
1583	sleep 3
1584	else
1585	printf "\n\n *** user-interface file \"$dateiname\" "
1586	printf "\n added to the files to be translated \n"
1587	sleep 3
1588	fi
1589	fi
1590	done
1591
1592	cd - > /dev/null
1593	fi
1594	fi
1595
1596
1597	# ALLE UNTERPROGRAMME, DIE ZU VEREINBARTEN SOFTWAREPAKETEN GEHOEREN,
1598	# DER LISTE DER ZU UEBERSETZENDEN DATEIEN HINZUFUEGEN
1599	if [[ $restart_run != true && -n $package_list ]]
1600	then
1601
1602	cd $source_path
1603
1604	for package in $package_list
1605	do
1606
1607	[[ $package = "dvrp_graphics+1PE" ]] && package=dvrp_graphics
1608
1609	# ERMITTELE ALLE DATEIEN, DIE ZUM PAKET GEHOEREN
1610	# FEHLERMELDUNGEN WERDEN ABGEFANGEN, DA * AUCH VERZEICHNISSNAMEN
1611	# LIEFERT
1612	package_source_list=`grep "defined( __$package " * 2>/dev/null \| cut -f1 -d:`
1613
1614
1615	# FUEGE DIESE DATEIEN DER LISTE DER ZU UEBERSETZENDEN DATEIEN
1616	# HINZU, FALLS SIE NOCH NICHT DAZUGEHOEREN
1617	for source_list_name in $package_source_list
1618	do
1619	if [[ $(echo $source_list \| grep -c $source_list_name) = 0 ]]
1620	then
1621
1622	# NUR DATEIEN MIT GUELTIGEN ENDUNGEN VERWENDEN
1623	ending=`echo $source_list_name \| cut -f2 -d.`
1624	if [[ "$ending" = f90 \|\| "$ending" = F90 \|\| "$ending" = f \|\| "$ending" = F \|\| "$ending" = c ]]
1625	then
1626	cp $source_list_name $working_directory/SOURCES_FOR_RUN_$fname
1627	source_list="$source_list $source_list_name"
1628	fi
1629	fi
1630	done
1631	done
1632
1633	cd - > /dev/null
1634	fi
1635
1636
1637	# MAKEFILE AUF VORHANDENSEIN PRUEFEN UND KOPIEREN
1638	# BEI RESTART-LAEUFEN LIEGT ES SCHON IM VERZEICHNIS SOURCES_FOR_RUN...
1639	if [[ "$restart_run" != true ]]
1640	then
1641	[[ "$makefile" = "" ]] && makefile=$source_path/Makefile
1642	if [[ ! -f $makefile ]]
1643	then
1644	printf "\n +++ file \"$makefile\" does not exist"
1645	locat=make; exit
1646	else
1647	cp $makefile SOURCES_FOR_RUN_$fname/Makefile
1648	fi
1649	fi
1650
1651	fi # do_compile=true
1652
1653
1654	# FALLS PROGRAMMTEILE UEBERSETZT WERDEN SOLLEN, FOLGEN JETZT EINIGE
1655	# UEBERPRUEFUNGEN UND DAS SETZEN DER PRAEPROZESSOR-DIREKTIVEN
1656	if [[ $do_compile = true ]]
1657	then
1658
1659	# PRAEPROZESSOR-DIREKTIVEN ZUM SELEKTIVEN AUSWAEHLEN VON CODETEILEN
1660	# ZUSAMMENSETZEN
1661	# DIREKTIVEN ZUM AKTIVIEREN VON RECHNERSPEZIFISCHEM CODE
1662	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1663	then
1664	cpp_options="${cpp_options},-D__ibm=__ibm"
1665	elif [[ $(echo $localhost \| cut -c1-3) = nec ]]
1666	then
1667	cpp_options="$cpp_options -D__nec"
1668	elif [[ $(echo $localhost \| cut -c1-2) = lc ]]
1669	then
1670	cpp_options="$cpp_options -D__lc"
1671	else
1672	cpp_options="$cpp_options -D__$localhost"
1673	fi
1674
1675	# DIREKTIVEN DIE DURCH OPTION -K BESTIMMT WERDEN (Z.B. PARALLEL)
1676	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1677	then
1678	[[ -n $cond1 ]] && cpp_options="${cpp_options},-D__$cond1=__$cond1"
1679	[[ -n $cond2 ]] && cpp_options="${cpp_options},-D__$cond2=__$cond2"
1680	else
1681	[[ -n $cond1 ]] && cpp_options="$cpp_options -D__$cond1"
1682	[[ -n $cond2 ]] && cpp_options="$cpp_options -D__$cond2"
1683	fi
1684
1685	# DIREKTIVEN DIE SOFTWAREPAKETE AKTIVIEREN (OPTION -p)
1686	if [[ -n $package_list ]]
1687	then
1688	for package in $package_list
1689	do
1690	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1691	then
1692	if [[ $package != "dvrp_graphics+1PE" ]]
1693	then
1694	cpp_options="${cpp_options},-D__$package=__$package"
1695	else
1696	cpp_options="${cpp_options},-D__dvrp_graphics=__dvrp_graphics"
1697	export use_seperate_pe_for_dvrp_output=true
1698	fi
1699	else
1700	if [[ $package != "dvrp_graphics+1PE" ]]
1701	then
1702	cpp_options="$cpp_options -D__$package"
1703	else
1704	cpp_options="$cpp_options -D__dvrp_graphics"
1705	export use_seperate_pe_for_dvrp_output=true
1706	fi
1707	fi
1708	done
1709	fi
1710
1711	# DIREKTIVEN DIE DURCH OPTION -D FESTGELEGT SIND
1712	if [[ -n $cpp_opts ]]
1713	then
1714	for popts in $cpp_opts
1715	do
1716	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1717	then
1718	cpp_options="${cpp_options},-D__$popts=__$popts"
1719	else
1720	cpp_options="$cpp_options -D__$popts"
1721	fi
1722	done
1723	fi
1724
1725	else
1726
1727
1728	# BEI LOKALEN RECHNUNGEN PRUEFEN, OB EXECUTABLE VORHANDEN
1729	if [[ $do_remote = false ]]
1730	then
1731	if [[ ! -f $executable ]]
1732	then
1733	printf "\n +++ executable file: $executable"
1734	printf "\n does not exist"
1735	locat=executable; exit
1736	fi
1737	fi
1738	fi
1739
1740
1741	# JOBMODUS FESTSTELLEN
1742	if [[ "$ENVIRONMENT" = BATCH && $localhost != lctit \|\| "$QUEUE" != interactive && $localhost = lctit ]]
1743	then
1744	jobmo=BATCH
1745	else
1746	jobmo=INTERACTIVE
1747	fi
1748
1749
1750	# HOSTSPEZIFISCHE DEFAULT-COMPILER SETZEN, FALLS NICHT BEREITS
1751	# DURCH BENUTZER ANDERWEITIG VEREINBART
1752	if [[ "$compiler_name" = "" ]]
1753	then
1754
1755	printf "\n +++ no compiler specified for \"$localhost $cond1 $cond2\""
1756	locat=compiler_name; exit
1757
1758	fi
1759
1760
1761	# COMPILER AUF NECK UEBERSCHREIBEN
1762	[[ $localhost = neck ]] && compiler_name=mpif90
1763
1764
1765
1766	# TEMPORAEREN KATALOGNAMEN BESTIMMEN
1767	kennung=$RANDOM
1768	if [[ "$tmp_user_catalog" = "" ]]
1769	then
1770	if [[ $localhost = ibmb \|\| $localhost = ibmh ]]
1771	then
1772	tmp_user_catalog=$TMPDIR
1773	elif [[ $localhost = nech ]]
1774	then
1775	tmp_user_catalog=$WRKSHR
1776	else
1777	tmp_user_catalog=/tmp
1778	fi
1779	fi
1780	TEMPDIR=$tmp_user_catalog/${usern}.$kennung
1781
1782
1783	# KATALOGNAMEN FUER ZWISCHENSPEICHERUNG VON FORTSETZUNGSLAUFDATEIEN
1784	# BESTIMMEN
1785	if [[ "$tmp_data_catalog" = "" ]]
1786	then
1787	if [[ $localhost = ibmb \|\| $localhost = ibmh ]]
1788	then
1789	tmp_data_catalog=$WORK/mrun_restart_data
1790	elif [[ $localhost = nech ]]
1791	then
1792	tmp_data_catalog=$WRKSHR/mrun_restart_data
1793	else
1794	tmp_data_catalog=/tmp/mrun_restart_data
1795	fi
1796	fi
1797
1798
1799	# EVENTUELL BEI LOKALEN RECHNUNGEN $-ZEICHEN IN ENVIRONMENT-VARIABLEN
1800	# ERSETZEN
1801	if [[ $do_remote = false && $do_compile = true ]]
1802	then
1803	eval fopts=\"$fopts\"
1804	eval lopts=\"$lopts\"
1805	fi
1806
1807
1808
1809	# COMPILE- UND LINK-OPTIONEN BESTIMMEN
1810	fopts="$fopts $netcdf_inc $dvrp_inc"
1811	lopts="$lopts $netcdf_lib $dvrp_lib"
1812	ROPTS="$ropts"
1813	if [[ ( $(echo $host \| cut -c1-3) = nec \|\| $(echo $host \| cut -c1-3) = ibm \|\| $host = lctit \|\| $host = lcfimm ) && -n $numprocs ]]
1814	then
1815	XOPT="-X $numprocs"
1816	fi
1817
1818
1819
1820	# PRUEFEN DER CPU-ZEIT. (CPUMAX WIRD ALS ENV-VARIABLE VOM HAUTPRO-
1821	# GRAMM BENOETIGT
1822	done=false
1823	while [[ $done = false ]]
1824	do
1825	cputime=$cpumax
1826	if (( $cputime == 0 ))
1827	then
1828	printf "\n +++ cpu-time is undefined"
1829	printf "\n >>> Please type CPU-time in seconds as INTEGER:"
1830	printf "\n >>> "
1831	read cputime 1>/dev/null 2>&1
1832	else
1833	done=true
1834	fi
1835	cpumax=$cputime
1836	done
1837
1838	(( minuten = cputime / 60 ))
1839	(( sekunden = cputime - minuten * 60 ))
1840
1841
1842	# PRUEFEN DER KERNSPEICHERANFORDERUNG
1843	if [[ $do_batch = true ]]
1844	then
1845	done=false
1846	while [[ $done = false ]]
1847	do
1848	if (( memory == 0 ))
1849	then
1850	printf "\n +++ memory demand is undefined"
1851	printf "\n >>> Please type memory in MByte per process as INTEGER:"
1852	printf "\n >>> "
1853	read memory 1>/dev/null 2>&1
1854	else
1855	done=true
1856	fi
1857	done
1858	fi
1859
1860
1861	# PRUEFEN, OB FUER REMOTE-RECHNUNGEN EIN BENUTZERNAME ANGEGEBEN WURDE
1862	if [[ $do_remote = true && -z $remote_username ]]
1863	then
1864	while [[ -z $remote_username ]]
1865	do
1866	printf "\n +++ username on remote host \"$host\" is undefined"
1867	printf "\n >>> Please type username:"
1868	printf "\n >>> "
1869	read remote_username
1870	done
1871	mc="$mc -u$remote_username"
1872	fi
1873
1874	###########################################################################
1875	# HEADER-AUSGABE
1876	###########################################################################
1877
1878
1879	calltime=$(date)
1880	printf "\n"
1881	# [[ $silent = false ]] && clear
1882	printf "#--------------------------------------------------------------# \n"
1883	printf "\| $version$calltime \| \n"
1884	printf "\| \| \n"
1885	spalte1="called on:"; spalte2=$localhost_realname
1886	printf "\| $spalte1$spalte2 \| \n"
1887	if [[ $local_compile = false ]]
1888	then
1889	if [[ $do_remote = true ]]
1890	then
1891	spalte1="execution on:"; spalte2="$host (username: $remote_username)"
1892	else
1893	spalte1="execution on:"; spalte2="$host ($localhost_realname)"
1894	fi
1895	else
1896	spalte1="compiling test only!"; spalte2=""
1897	fi
1898	printf "\| $spalte1$spalte2 \| \n"
1899	if [[ -n $numprocs ]]
1900	then
1901	spalte1="number of PEs:"; spalte2=$numprocs
1902	printf "\| $spalte1$spalte2 \| \n"
1903	fi
1904	if [[ -n $tasks_per_node ]]
1905	then
1906	spalte1="tasks per node:"; spalte2="$tasks_per_node (number of nodes: $nodes)"
1907	printf "\| $spalte1$spalte2 \| \n"
1908	fi
1909	if [[ $threads_per_task != 1 ]]
1910	then
1911	spalte1="threads per task:"; spalte2="$threads_per_task"
1912	printf "\| $spalte1$spalte2 \| \n"
1913	fi
1914	printf "\| \| \n"
1915	if [[ $do_compile = true ]]
1916	then
1917	spalte1=cpp-directives:; spalte2=$cpp_options
1918	printf "\| $spalte1$spalte2 \| \n"
1919	zeile=$(echo "$cpp_options" \| cut -c41-)
1920	while [[ "$zeile" != "" ]]
1921	do
1922	spalte1=""
1923	spalte2=$zeile
1924	printf "\| $spalte1$spalte2 \| \n"
1925	zeile=$(echo "$zeile" \| cut -c41-)
1926	done
1927
1928	spalte1=compiler-options:; spalte2="$fopts"
1929	printf "\| $spalte1$spalte2 \| \n"
1930	zeile=$(echo "$fopts" \| cut -c41-)
1931	while [[ "$zeile" != "" ]]
1932	do
1933	spalte1=""
1934	spalte2=$zeile
1935	printf "\| $spalte1$spalte2 \| \n"
1936	zeile=$(echo "$zeile" \| cut -c41-)
1937	done
1938
1939	spalte1=linker-options:; spalte2=$lopts
1940	printf "\| $spalte1$spalte2 \| \n"
1941	zeile=$(echo "$lopts" \| cut -c41-)
1942	while [[ "$zeile" != "" ]]
1943	do
1944	spalte1=""
1945	spalte2=$zeile
1946	printf "\| $spalte1$spalte2 \| \n"
1947	zeile=$(echo "$zeile" \| cut -c41-)
1948	done
1949
1950	spalte1="main program":; spalte2=$mainprog
1951	printf "\| $spalte1$spalte2 \| \n"
1952	else
1953	spalte1=executable:; spalte2=$executable
1954	printf "\| $spalte1$spalte2 \| \n"
1955	fi
1956	printf "\| \| \n"
1957	spalte1="base name of files":; spalte2=$fname
1958	printf "\| $spalte1$spalte2 \| \n"
1959	if [[ $fname != $afname ]]
1960	then
1961	spalte1="base name of input files":; spalte2=$afname
1962	printf "\| $spalte1$spalte2 \| \n"
1963	fi
1964	spalte1="INPUT control list":; spalte2=$input_list
1965	printf "\| $spalte1$spalte2 \| \n"
1966	spalte1="OUTPUT control list":; spalte2=$output_list
1967	printf "\| $spalte1$spalte2 \| \n"
1968
1969	if [[ $do_batch = true \|\| "$LOADLBATCH" = yes ]]
1970	then
1971	spalte1="memory demand / PE":; spalte2="$memory MB"
1972	printf "\| $spalte1$spalte2 \| \n"
1973	spalte1=CPU-time:; spalte2="$minuten:$sekunden"
1974	printf "\| $spalte1$spalte2 \| \n"
1975	fi
1976
1977	if [[ $do_compile = true ]]
1978	then
1979	printf "\| \| \n"
1980	printf "\| Files to be compiled: \| \n"
1981	zeile=$source_list
1982	while [[ "$zeile" != "" ]]
1983	do
1984	spalte3=$zeile
1985	printf "\| $spalte3 \| \n"
1986	zeile=$(echo "$zeile" \| cut -c61-)
1987	done
1988	fi
1989	printf "#--------------------------------------------------------------#"
1990
1991
1992
1993	# BEDINGTE AUSGABE DER DATEIVERBINDUNGEN
1994	if [[ $do_trace = true ]]
1995	then
1996	(( i = 0 ))
1997	while (( i < iin ))
1998	do
1999	(( i = i + 1 ))
2000	if (( i == 1 ))
2001	then
2002	printf "\n\n >>> INPUT-file assignments:\n"
2003	fi
2004	printf "\n ${localin[$i]} : ${absnamein[$i]}"
2005	done
2006	(( i = 0 ))
2007	while (( i < iout ))
2008	do
2009	(( i = i + 1 ))
2010	if (( i == 1 ))
2011	then
2012	printf "\n\n >>> OUTPUT-file assignments:\n"
2013	fi
2014	printf "\n ${localout[$i]} : ${pathout[$i]}"
2015	done
2016	(( i = 0 ))
2017	while (( i < iic ))
2018	do
2019	(( i = i + 1 ))
2020	if (( i == 1 ))
2021	then
2022	printf "\n\n >>> INPUT-commands:\n"
2023	fi
2024	printf "\n ${in_command[$i]}"
2025	done
2026	(( i = 0 ))
2027	while (( i < ioc ))
2028	do
2029	(( i = i + 1 ))
2030	if (( i == 1 ))
2031	then
2032	printf "\n\n >>> OUTPUT-commands:\n"
2033	fi
2034	printf "\n ${out_command[$i]}"
2035	done
2036	fi
2037
2038
2039	# ABFRAGEN BEI AUFRUF AUF LOKALER MASCHINE
2040	if [[ $remotecall = false && $silent = false && $jobmo != BATCH ]]
2041	then
2042	antwort=dummy
2043	printf "\n\n"
2044	while [[ "$antwort" != y && "$antwort" != Y && "$antwort" != n && "$antwort" != N ]]
2045	do
2046	printf " >>> everything o.k. (y/n) ? "
2047	read antwort
2048	done
2049	if [[ $antwort = n \|\| $antwort = N ]]
2050	then
2051	locat=user_abort; (( iec = 0 )); exit
2052	fi
2053	if [[ $do_batch = true ]]
2054	then
2055	printf " >>> batch-job will be created and submitted"
2056	else
2057	if [[ $local_compile = false ]]
2058	then
2059	printf " >>> MRUN will now continue to execute on this machine"
2060	else
2061	printf " >>> a test compilation will now be carried out on this machine"
2062	fi
2063	fi
2064	fi
2065
2066
2067
2068
2069	# FALLS AUF DIESER MASCHINE GERECHNET WERDEN SOLL, WERDEN JETZT ENTSPRE-
2070	# CHENDE AKTIONEN DURCHGEFUEHRT
2071	if [[ $do_batch = false ]]
2072	then
2073
2074
2075	# TEMPORAEREN KATALOG ERZEUGEN
2076	mkdir -p $TEMPDIR
2077	chmod go+rx $TEMPDIR
2078	tmpcreate=true
2079
2080
2081	# SAEMTLICHE QUELLTEXT-DATEIEN BZW. AUSFUEHRBARES PROGRAMM IN
2082	# TEMPORAERES VERZEICHNIS KOPIEREN
2083	if [[ $do_compile = true ]]
2084	then
2085
2086	# ON NEC, COMPILATION IS DONE ON HOST CROSS VIA CROSS COMPILING
2087	# CREATE A TEMPORARY DIRECTORY ON THAT MACHINE (HOME MOUNTED VIA NFS)
2088	if [[ $localhost = nech ]]
2089	then
2090	TEMPDIR_COMPILE=$HOME/work/${usern}.$kennung
2091	if mkdir -p $TEMPDIR_COMPILE
2092	then
2093	printf "\n *** \"$TEMPDIR_COMPILE\" "
2094	printf "\n is generated as temporary directory for cross compiling\n"
2095	else
2096	printf "\n +++ creating directory \"$TEMPDIR_COMPILE\" "
2097	printf "\n needed for cross compilation failed"
2098	locat=compile
2099	exit
2100	fi
2101	else
2102	TEMPDIR_COMPILE=$TEMPDIR
2103	fi
2104
2105
2106	# PFADNAMEN FUER DAS MAKE-DEPOSITORY ERMITTELN
2107	line=""
2108	grep "%depository_path" $config_file > tmp_mrun
2109	while read line
2110	do
2111	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
2112	then
2113	if [[ "$(echo $line \| cut -d" " -s -f3)" = "" ]]
2114	then
2115	global_depository_path=`echo $line \| cut -d" " -s -f2`
2116	fi
2117	fi
2118	done < tmp_mrun
2119
2120	line=""
2121	grep " $localhost" $config_file \| grep "%depository_path" > tmp_mrun
2122	while read line
2123	do
2124	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
2125	then
2126	local_depository_path=`echo $line \| cut -d" " -s -f2`
2127	fi
2128	done < tmp_mrun
2129
2130	if [[ "$local_depository_path" = "" ]]
2131	then
2132	if [[ "$global_depository_path" != "" ]]
2133	then
2134	local_depository_path=$global_depository_path
2135	else
2136	printf "\n\n +++ no depository path found in configuration file"
2137	printf "\n for local host \"$localhost\" "
2138	printf "\n please set \"\%depository_path\" in configuration file\n"
2139	locat=config_file; exit
2140	fi
2141	fi
2142	eval local_depository_path=$local_depository_path
2143
2144	basename=`print $mainprog \| cut -f1 -d"."`
2145	eval make_depository=${local_depository_path}/${basename}_current_version.tar
2146	if [[ ! -f $make_depository ]]
2147	then
2148	printf "\n"
2149	printf "\n *** WARNING: make depository \"$make_depository\" not found"
2150	printf "\n \"make\" will fail, if the Makefile or other source files are missing\n"
2151	else
2152	cp $make_depository $TEMPDIR_COMPILE
2153	cd $TEMPDIR_COMPILE
2154	tar -xf $make_depository > /dev/null 2>&1
2155	cd - > /dev/null
2156	fi
2157
2158	cp SOURCES_FOR_RUN_$fname/* $TEMPDIR_COMPILE
2159
2160	# FALLS USER-INTERFACE VORHANDEN UND AUF DATEI MIT ANDEREM NAMEN
2161	# ALS user_interface.f90 LIEGT, DIESEN GEAENDERTEN NAMEN INS
2162	# MAKEFILE EINTRAGEN
2163	cd $TEMPDIR_COMPILE
2164	interface_file=`grep -l "END SUBROUTINE user_parin" $source_list`
2165	if [[ "$interface_file" != "" ]]
2166	then
2167	interface_file=`echo $interface_file \| cut -d"." -f1`
2168	mv Makefile Makefile_old
2169	sed "s/user_interface/$interface_file/g" Makefile_old > Makefile
2170	fi
2171	cd - > /dev/null
2172	else
2173	cp $executable ${TEMPDIR}/a.out
2174	fi
2175
2176
2177	# WECHSEL IN TEMPORAEREN KATALOG
2178	cd $TEMPDIR
2179	printf "\n *** changed to temporary directory: $TEMPDIR"
2180
2181
2182	# OUTPUT-DATEI-VERBINDUNGEN AUF TEMPORAERER DATEI ABLEGEN
2183	# DIESE DATEI KANN VON SPAETER AUFZURUFENDEN BENUTZERPROZEDUREN GELESEN
2184	# WERDEN, UM ZU LOKALEN DATEINAMEN GEHOERENDE PERMANENTE NAMEN ZU
2185	# ERMITTELN
2186	(( i = 0 ))
2187	while (( i < iout ))
2188	do
2189	(( i = i + 1 ))
2190	if [[ "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = tra \|\| "${actionout[$i]}" = trpe ]]
2191	then
2192	printf "${localout[$i]} ${actionout[$i]}\n${pathout[$i]}\n${localhost}_${fname}${endout[$i]}\n" >> OUTPUT_FILE_CONNECTIONS
2193	else
2194	printf "${localout[$i]} ${actionout[$i]}\n${pathout[$i]}\n${frelout[$i]}\n" >> OUTPUT_FILE_CONNECTIONS
2195	fi
2196	done
2197
2198
2199	# EVTL. UEBERSETZUNGSAKTIONEN STARTEN
2200	if [[ $do_compile = true ]]
2201	then
2202
2203
2204	# COMPILING WITH MAKE (ON NEC COMPILER IS CALLED ON HOST CROSS)
2205	printf "\n\n\n *** compilation starts \n$striche\n"
2206	printf " *** compilation with make using following options:\n"
2207	printf " compilername: $compiler_name\n"
2208	printf " options: $fopts\n"
2209	printf " preprocessor-directives: $cpp_options \n"
2210	printf " linker-options: $lopts \n"
2211	printf " source code files: $source_list \n"
2212
2213	if [[ $localhost = nech ]]
2214	then
2215	ssh 136.172.44.192 -l $usern ". /SX/opt/etc/initsx.sh; cd \$HOME/work/${usern}.$kennung; sxmake -f Makefile PROG=a.out F90=$compiler_name COPT=\"$cpp_options\" F90FLAGS=\"$fopts\" LDFLAGS=\"$lopts\" "
2216	cp $TEMPDIR_COMPILE/a.out .
2217	[[ $? != 0 ]] && compile_error=true
2218	rm -rf $TEMPDIR_COMPILE
2219	else
2220	[[ $localhost = lctit ]] && export LM_LICENSE_FILE=27050@tggls
2221	make -f Makefile PROG=a.out F90=$compiler_name COPT="$cpp_options" F90FLAGS="$fopts" LDFLAGS="$lopts"
2222	fi
2223
2224	if [[ $? != 0 \|\| "$compile_error" = true \|\| "$module_compile_error" = true ]]
2225	then
2226	printf "\n +++ error occured while compiling or linking"
2227	locat=compile
2228	exit
2229	else
2230	printf "$striche\n *** compilation finished \n"
2231	fi
2232	fi
2233
2234
2235	# FALLS NUR TESTWEISE KOMPILIERT WERDEN SOLLTE, IST MRUN JETZT FERTIG
2236	if [[ $local_compile = true ]]
2237	then
2238	cd $HOME
2239	rm -rf $TEMPDIR
2240	locat=local_compile; exit
2241	fi
2242
2243
2244	# BEREITSTELLEN DER INPUT-DATEIEN
2245	# SCHLEIFE UEBER ALLE VOM BENUTZER ANGEGEBENEN DATEIEN
2246	(( i = 0 ))
2247	while (( i < iin ))
2248	do
2249	(( i = i + 1 ))
2250	if (( i == 1 ))
2251	then
2252	printf "\n\n *** providing INPUT-files:\n$striche"
2253	fi
2254
2255
2256	# OPTIONALE DATEIEN BEI NICHTVORHANDENSEIN UEBERGEHEN
2257	if [[ "${transin[$i]}" = unavailable ]]
2258	then
2259	if [[ "${extin[$i]}" = "" \|\| "${extin[$i]}" = " " ]]
2260	then
2261	printf "\n +++ WARNING: input file \"${pathin[$i]}/${afname}${endin[$i]}\" "
2262	printf "\n is not available!"
2263	else
2264	printf "\n +++ WARNING: input file \"${pathin[$i]}/${afname}${endin[$i]}.${extin[$i]}\" "
2265	printf "\n is not available!"
2266	fi
2267	continue
2268	fi
2269
2270	# PRUEFEN, OB EINZELDATEI ODER DATEI PRO PROZESSOR
2271	files_for_pes=false; datentyp=file
2272	if [[ "${actionin[$i]}" = pe && -n $numprocs ]]
2273	then
2274	files_for_pes=true; datentyp=directory
2275	actionin[$i]=""
2276	elif [[ "${actionin[$i]}" = pe && ! -n $numprocs ]]
2277	then
2278	actionin[$i]=""
2279	elif [[ "${actionin[$i]}" = arpe && -n $numprocs ]]
2280	then
2281	files_for_pes=true; datentyp=directory
2282	actionin[$i]="ar"
2283	elif [[ "${actionin[$i]}" = arpe && ! -n $numprocs ]]
2284	then
2285	actionin[$i]="ar"
2286	elif [[ "${actionin[$i]}" = flpe && -n $numprocs ]]
2287	then
2288	files_for_pes=true; datentyp=directory
2289	actionin[$i]="fl"
2290	elif [[ "${actionin[$i]}" = flpe && ! -n $numprocs ]]
2291	then
2292	actionin[$i]="fl"
2293	fi
2294
2295	if [[ $files_for_pes = true ]]
2296	then
2297	printf "\n >>> INPUT: ${absnamein[$i]}/.... to ${localin[$i]}"
2298	else
2299	printf "\n >>> INPUT: ${absnamein[$i]} to ${localin[$i]}"
2300	fi
2301
2302	# INPUT-DATEI FUER EINEN FORTSETZUNGSLAUF. ES WIRD GEPRUEFT,
2303	# OB DIESE DATEI NOCH AUF DEM TEMPORAEREN DATENKATALOG VORHANDEN
2304	# IST. FALLS NICHT, WIRD VERSUCHT, SIE ANSCHLIESSEND VOM ARCHIV-
2305	# SERVER ZU HOLEN
2306	if [[ "${actionin[$i]}" = fl ]]
2307	then
2308	printf "\n $datentyp will be fetched from temporary directory \"${tmp_data_catalog}\" !"
2309	if [[ $files_for_pes = false ]]
2310	then
2311	if [[ -f "$tmp_data_catalog/${frelin[$i]}" ]]
2312	then
2313	ln $tmp_data_catalog/${frelin[$i]} ${localin[$i]}
2314	got_tmp[$i]=true
2315	elif [[ -f "$WORK/${frelin[$i]}" && $ignore_archive_error = true ]]
2316	then
2317	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" !"
2318	printf "\n *** trying to use backup copy in \"$WORK\" "
2319	cp $WORK/${frelin[$i]} ${localin[$i]}
2320	else
2321	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" "
2322	printf "\n or \"$tmp_data_catalog\" does not exist!"
2323	printf "\n *** trying to get copy from archive"
2324	actionin[$i]=ar
2325	fi
2326	else
2327	if [[ -d "$tmp_data_catalog/${frelin[$i]}" ]]
2328	then
2329	mkdir ${localin[$i]}
2330	ln $tmp_data_catalog/${frelin[$i]}/* ${localin[$i]}
2331	got_tmp[$i]=true
2332	elif [[ -d "$WORK/${frelin[$i]}" && $ignore_archive_error = true ]]
2333	then
2334	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" !"
2335	printf "\n *** trying to use backup copy in \"$WORK\" "
2336	cp -r $WORK/${frelin[$i]} ${localin[$i]}
2337	else
2338	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" "
2339	printf "\n or \"$tmp_data_catalog\" does not exist!"
2340	printf "\n *** trying to get copy from archive"
2341	actionin[$i]=ar
2342	fi
2343	fi
2344	fi
2345
2346
2347	# DATEI LIEGT AUF ARCHIV-SERVER
2348	if [[ "${actionin[$i]}" = ar ]]
2349	then
2350
2351	if [[ $files_for_pes = false ]]
2352	then
2353	printf "\n file will be restored from archive-system ($archive_system)!"
2354	else
2355	printf "\n directory will be restored from archive-system ($archive_system)!"
2356	fi
2357
2358	file_restored=false
2359
2360	if [[ $archive_system = asterix ]]
2361	then
2362	do_stagein=true
2363	(( stagein_anz = 0 ))
2364	while [[ $do_stagein = true ]]
2365	do
2366	if [[ $files_for_pes = false ]]
2367	then
2368	stagein -O ${frelin[$i]} > STAGEIN_OUTPUT
2369	else
2370	stagein -t -O ${frelin[$i]} > STAGEIN_OUTPUT
2371	fi
2372	cat STAGEIN_OUTPUT
2373	if [[ $(grep -c "st.msg:i24" STAGEIN_OUTPUT) != 0 ]]
2374	then
2375	file_restored=true
2376	do_stagein=false
2377	else
2378	(( stagein_anz = stagein_anz + 1 ))
2379	if (( stagein_anz == 10 ))
2380	then
2381	printf "\n +++ stagein stoped after 10 tries"
2382	locat=stage
2383	exit
2384	fi
2385	printf "\n +++ restoring from archive failed, trying again:"
2386	sleep 900
2387	fi
2388	done
2389	elif [[ $archive_system = DMF ]]
2390	then
2391	if [[ $files_for_pes = false ]]
2392	then
2393	printf "\n +++ restoring of single files impossible with $archive_system !\n"
2394	locat=DMF
2395	exit
2396	else
2397	find $ARCHIVE/${frelin[$i]} -type m -print \| dmget
2398	cp -r $ARCHIVE/${frelin[$i]} $PWD
2399	file_restored=true
2400	fi
2401	elif [[ $archive_system = tivoli ]]
2402	then
2403	if [[ $files_for_pes = false ]]
2404	then
2405	if [[ $localhost = ibmh ]]
2406	then
2407	ssh $usern@hdata.hlrn.de "cp $PERM/${frelin[$i]} $PWD"
2408	else
2409	ssh $usern@bdata.hlrn.de "cp $PERM/${frelin[$i]} $PWD"
2410	fi
2411	else
2412	(( inode = 0 ))
2413	while (( inode < nodes ))
2414	do
2415	if [[ $localhost = ibmh ]]
2416	then
2417	ssh $usern@hdata.hlrn.de "cd $PWD; tar xf $PERM/${frelin[$i]}/${frelin[$i]}.node_$inode.tar"
2418	else
2419	ssh $usern@bdata.hlrn.de "cd $PWD; tar xf $PERM/${frelin[$i]}/${frelin[$i]}.node_$inode.tar"
2420	fi
2421	(( inode = inode + 1 ))
2422	done
2423	fi
2424	file_restored=true
2425	elif [[ $archive_system = ut ]]
2426	then
2427	if [[ $files_for_pes = false ]]
2428	then
2429	cp $UT/${frelin[$i]} .
2430	else
2431	(( inode = 0 ))
2432	while (( inode < nodes ))
2433	do
2434	tar xf $UT/${frelin[$i]}/${frelin[$i]}.node_$inode.tar
2435	(( inode = inode + 1 ))
2436	done
2437	fi
2438	file_restored=true
2439	else
2440	printf "\n +++ archive_system=\"$archive_system\" restore impossible!"
2441	locat=rearchive
2442	exit
2443	fi
2444
2445	if [[ $file_restored = true ]]
2446	then
2447
2448	# DATEI AUCH AUF TEMPORAERES DATENVERZEICHNIS LEGEN, DAMIT
2449	# SIE BEI WEITEREN ZUGRIFFEN NOCH VORHANDEN IST
2450	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog; chmod g+rx $tmp_data_catalog
2451	if [[ $files_for_pes = false ]]
2452	then
2453	ln -f ${frelin[$i]} $tmp_data_catalog/${frelin[$i]}
2454	else
2455	mkdir $tmp_data_catalog/${frelin[$i]}
2456	ln -f ${frelin[$i]}/* $tmp_data_catalog/${frelin[$i]}
2457	fi
2458	got_tmp[$i]=true
2459
2460	# DATEI UNTER LOKALEM NAMEN ZUR VERFUEGUNG STELLEN
2461	mv ${frelin[$i]} ${localin[$i]}
2462
2463	fi
2464	fi
2465
2466
2467	# DATEI LIEGT IM VOM BENUTZER ANGEGEBENEN VERZEICHNIS
2468	if [[ "${actionin[$i]}" = "" \|\| "${actionin[$i]}" = "di" \|\| "${actionin[$i]}" = "npe" ]]
2469	then
2470
2471	if [[ "${actionin[$i]}" = "npe" && -n $numprocs ]]
2472	then
2473
2474	# DATEI WIRD FUER DIE PROZESSOREN EINES PARALLERECHNERS BEREITGESTELLT
2475	printf "\n file will be provided for $numprocs processors"
2476	mkdir ${localin[$i]}
2477	ival=$numprocs
2478	(( ii = 0 ))
2479	while (( ii <= ival-1 ))
2480	do
2481	if (( ii < 10 ))
2482	then
2483	cp ${absnamein[$i]} ${localin[$i]}/_000$ii
2484	elif (( ii < 100 ))
2485	then
2486	cp ${absnamein[$i]} ${localin[$i]}/_00$ii
2487	elif (( ii < 1000 ))
2488	then
2489	cp ${absnamein[$i]} ${localin[$i]}/_0$ii
2490	else
2491	cp ${absnamein[$i]} ${localin[$i]}/_$ii
2492	fi
2493	(( ii = ii + 1 ))
2494	done
2495
2496	else
2497
2498	if [[ $files_for_pes = true ]]
2499	then
2500
2501	# DIE DEN PROZESSOREN EINES PARALLELRECHNERS ZUGEHOERIGEN
2502	# DATEIEN WERDEN BEREITGESTELLT, INDEM ZUERST DER GESAMTE
2503	# KATALOGINHALT KOPIERT UND DANN DIE EINZELNEN DATEIEN
2504	# PER MOVE UMBENANNT WERDEN
2505	printf "\n providing $numprocs files for the respective processors"
2506	mkdir ${localin[$i]}
2507	cp -r ${absnamein[$i]}/* ${localin[$i]}
2508
2509	else
2510	# BEREITSTELLUNG AUF EINPROZESSORRECHNERN
2511	cp ${absnamein[$i]} ${localin[$i]}
2512	fi
2513	fi
2514	fi
2515
2516	done
2517	if (( i != 0 ))
2518	then
2519	printf "\n$striche\n *** all INPUT-files provided \n"
2520	fi
2521
2522
2523	# NAMELIST-DATEI MIT WERTEN VON ENVIRONMENT-VARIABLEN ERZEUGEN (ZU
2524	# LESEN VON PALM)
2525	cat > ENVPAR << %%END%%
2526	&envpar run_identifier = '$fname', host = '$localhost',
2527	write_binary = '$write_binary', tasks_per_node = $tasks_per_node,
2528	maximum_cpu_time_allowed = ${cpumax}.,
2529	revision = '$global_revision' /
2530
2531	%%END%%
2532
2533
2534	# EVENTUELLE INPUT-KOMMANDOS ABARBEITEN
2535	(( i = 0 ))
2536	while (( i < iic ))
2537	do
2538	(( i = i + 1 ))
2539	if (( i == 1 ))
2540	then
2541	printf "\n\n *** execution of INPUT-commands:\n$striche"
2542	fi
2543	printf "\n >>> ${in_command[$i]}"
2544	eval ${in_command[$i]}
2545	if (( i == iic ))
2546	then
2547	printf "\n$striche\n"
2548	fi
2549	done
2550
2551
2552	# VERBLEIBENDE CPU-ZEIT BERECHNEN
2553	cpurest=${cpumax}.
2554
2555
2556	# PROGRAMMSTART
2557	printf "\n\n *** execution starts in directory\n \"`pwd`\"\n$striche\n"
2558	PATH=$PATH:$TEMPDIR
2559
2560	if [[ "$cond1" = debug \|\| "$cond2" = debug ]]
2561	then
2562	if [[ "$ENVIRONMENT" = BATCH ]]
2563	then
2564	printf "\n +++ debug is allowed in interactive mode only"
2565	locat=debug
2566	exit
2567	fi
2568	if [[ $localhost = decalpha ]]
2569	then
2570	dxladebug a.out
2571	elif [[ $localhost = ibmb \|\| $localhost = ibmh ]]
2572	then
2573
2574	# SETUP THE IBM MPI ENVIRONMENT
2575	export MP_SHARED_MEMORY=yes
2576	export AIXTHREADS_SCOPE=S
2577	export OMP_NUM_THREADS=$threads_per_task
2578	export AUTHSTATE=files
2579	export XLFRTEOPTS="nlwidth=132:err_recovery=no" # RECORD-LENGTH OF NAMELIST-OUTPUT
2580
2581	# FOLLOWING OPTIONS ARE MANDATORY FOR TOTALVIEW
2582	export MP_ADAPTER_USE=shared
2583	export MP_CPU_USE=multiple
2584	export MP_TIMEOUT=1200
2585
2586	unset MP_TASK_AFFINITY
2587
2588	# SO FAR, TOTALVIEW NEEDS HOSTFILE MECHANISM FOR EXECUTION
2589	#(( ii = 1 ))
2590	#while (( ii <= $numprocs ))
2591	#do
2592	# echo $localhost_realname >> hostfile
2593	# (( ii = ii + 1 ))
2594	#done
2595	#export MP_HOSTFILE=hostfile
2596
2597	if [[ "$LOADLBATCH" = yes ]]
2598	then
2599	totalview poe a.out $ROPTS
2600	else
2601	echo totalview poe -a a.out -procs $numprocs -rmpool 0 -nodes 1 $ROPTS
2602	export TVDSVRLAUNCHCMD=ssh
2603	totalview poe -a a.out -procs $numprocs -rmpool 0 -nodes 1 $ROPTS
2604	fi
2605	else
2606	printf "\n +++ no debug available on \"$localhost\" "
2607	printf "\n or not implemented in mrun so far"
2608	locat=debug
2609	exit
2610	fi
2611	else
2612	if [[ -n $numprocs ]]
2613	then
2614
2615	# RUNNING THE PROGRAM ON PARALLEL MACHINES
2616	if [[ $(echo $host \| cut -c1-3) = ibm ]]
2617	then
2618	# SETUP THE IBM MPI ENVIRONMENT
2619	export MP_SHARED_MEMORY=yes
2620	export AIXTHREAD_SCOPE=S
2621	export OMP_NUM_THREADS=$threads_per_task
2622	export XLSMPOPTS="spins=0:yields=0:stack=20000000"
2623	export AUTHSTATE=files
2624	export XLFRTEOPTS="nlwidth=132:err_recovery=no" # RECORD-LENGTH OF NAMELIST-OUTPUT
2625	# export MP_PRINTENV=yes
2626
2627	# TUNING-VARIABLEN ZUR VERBESSERUNG DER KOMMUNIKATION
2628	# ZEIGEN ABER DERZEIT (SEP 04, FEDERATION) KAUM WIRKUNG
2629	export MP_WAIT_MODE=poll
2630	[[ $node_usage = not_shared ]] && export MP_SINGLE_THREAD=yes
2631	# export MP_EAGER_LIMIT=65535
2632
2633	# # TESTWEISE FUER TURBOMPI (JAN 05)
2634	# export MPJ_MTAB=128
2635	# export MPJ_ALLTOALL=1
2636	# export MPJ_ALLTOALLV=1
2637
2638	if [[ "$LOADLBATCH" = yes ]]
2639	then
2640	printf "\n--- Control: OMP_NUM_THREADS = \"$OMP_NUM_THREADS\" \n"
2641	if [[ "$cond1" = hpmcount \|\| "$cond2" = hpmcount ]]
2642	then
2643	/opt/optibm/HPM_2_4_1/bin/hpmcount a.out $ROPTS
2644	else
2645	poe ./a.out $ROPTS
2646	fi
2647	else
2648	if [[ $localhost = ibmb \|\| $localhost = ibmh \|\| $localhost = ibms ]]
2649	then
2650	poe a.out -procs $numprocs -nodes 1 -rmpool 0 $ROPTS
2651	elif [[ $localhost = ibmy ]]
2652	then
2653	if [[ -f $hostfile ]]
2654	then
2655	cp $hostfile hostfile
2656	else
2657	(( ii = 1 ))
2658	while (( ii <= $numprocs ))
2659	do
2660	echo $localhost_realname >> hostfile
2661	(( ii = ii + 1 ))
2662	done
2663	fi
2664	export MP_HOSTFILE=hostfile
2665	./a.out -procs $tasks_per_node $ROPTS
2666	else
2667	if [[ "$host_file" = "" ]]
2668	then
2669	printf "\n +++ no hostfile given in configuration file"
2670	locat=config_file
2671	exit
2672	else
2673	eval host_file=$host_file
2674	fi
2675	export MP_HOSTFILE=$host_file
2676	poe a.out -procs $numprocs -tasks_per_node $numprocs $ROPTS
2677	fi
2678	fi
2679	elif [[ $host = nech \|\| $host = neck ]]
2680	then
2681	(( ii = nodes ))
2682	if [[ $ii = 1 ]]
2683	then
2684	export F_ERRCNT=0 # acceptable number of errors before program is stopped
2685	export MPIPROGINF=YES
2686	# export F_TRACE=YES\|FMT1\|FMT2 # output of ftrace informations to job protocol
2687	echo "*** execution on single node with mpirun"
2688	mpirun -np $numprocs ./a.out $ROPTS
2689	else
2690	(( i = 0 ))
2691	while (( i < ii ))
2692	do
2693	echo "-h $i -p $tasks_per_node -e ./mpi_exec_shell" >> multinode_config
2694	(( i = i + 1 ))
2695	done
2696
2697	echo "#!/bin/sh" > mpi_exec_shell
2698	echo " " >> mpi_exec_shell
2699	echo "set -u" >> mpi_exec_shell
2700	echo "F_ERRCNT=0" >> mpi_exec_shell
2701	echo "MPIPROGINV=YES" >> mpi_exec_shell
2702	echo "OMP_NUM_THREADS=$threads_per_task" >> mpi_exec_shell
2703	echo "cpurest=$cpurest" >> mpi_exec_shell
2704	echo "fname=$fname" >> mpi_exec_shell
2705	echo "localhost=$localhost" >> mpi_exec_shell
2706	echo "return_addres=$return_addres" >> mpi_exec_shell
2707	echo "return_username=$return_username" >> mpi_exec_shell
2708	echo "tasks_per_node=$tasks_per_node" >> mpi_exec_shell
2709	echo "write_binary=$write_binary" >> mpi_exec_shell
2710	echo "use_seperate_pe_for_dvrp_output=$use_seperate_pe_for_dvrp_output" >> mpi_exec_shell
2711	echo " " >> mpi_exec_shell
2712	echo "export F_ERRCNT" >> mpi_exec_shell
2713	echo "export MPIPROGINV" >> mpi_exec_shell
2714	echo "export OMP_NUM_THREADS" >> mpi_exec_shell
2715	echo "export cpurest" >> mpi_exec_shell
2716	echo "export fname" >> mpi_exec_shell
2717	echo "export localhost" >> mpi_exec_shell
2718	echo "export return_addres" >> mpi_exec_shell
2719	echo "export return_username" >> mpi_exec_shell
2720	echo "export tasks_per_node" >> mpi_exec_shell
2721	echo "export write_binary" >> mpi_exec_shell
2722	echo "export use_seperate_pe_for_dvrp_output" >> mpi_exec_shell
2723	echo " " >> mpi_exec_shell
2724	echo "exec ./a.out" >> mpi_exec_shell
2725
2726	chmod u+x mpi_exec_shell
2727	export MPIPROGINF=YES
2728	mpirun -f multinode_config &
2729	wait
2730
2731	fi
2732	elif [[ $(echo $host \| cut -c1-2) = lc && $host != lctit ]]
2733	then
2734
2735	# COPY HOSTFILE FROM SOURCE DIRECTORY OR CREATE IT, IF IT
2736	# DOES NOT EXIST
2737	if [[ -f $hostfile ]]
2738	then
2739	cp $hostfile hostfile
2740	else
2741	(( ii = 1 ))
2742	while (( ii <= $numprocs / $threads_per_task ))
2743	do
2744	echo $localhost_realname >> hostfile
2745	(( ii = ii + 1 ))
2746	done
2747	fi
2748	(( ii = $numprocs / $threads_per_task ))
2749	eval zeile=\"`head -n $ii hostfile`\"
2750	printf "\n *** running on: $zeile"
2751	export OMP_NUM_THREADS=$threads_per_task
2752	if [[ $threads_per_task != 1 ]]
2753	then
2754	printf "\n threads per task: $threads_per_task"
2755	fi
2756	if [[ $run_coupled_model = false ]]
2757	then
2758	printf "\n\n"
2759	mpiexec -machinefile hostfile -n $ii a.out $ROPTS
2760	else
2761	(( iii = ii / 2 ))
2762	printf "\n coupled run ($iii atmosphere, $iii ocean)"
2763	printf "\n\n"
2764	mpiexec -machinefile hostfile -n $iii -env coupling_mode atmosphere_to_ocean a.out $ROPTS &
2765	mpiexec -machinefile hostfile -n $iii -env coupling_mode ocean_to_atmosphere a.out $ROPTS &
2766	wait
2767	fi
2768
2769	# if [[ $scirocco = true ]]
2770	# then
2771	# mpiexec -machinefile hostfile -n $ii a.out $ROPTS
2772	# else
2773	# mpirun -machinefile hostfile -np $ii a.out $ROPTS
2774	# fi
2775
2776	elif [[ $host = decalpha ]]
2777	then
2778	dmpirun -np $numprocs a.out $ROPTS
2779	elif [[ $host = lctit ]]
2780	then
2781	export runfile=runfile.$kennung
2782
2783	echo "cd $PWD" > $runfile
2784	echo "export OMP_NUM_THREADS=$OMP_NUM_THREADS" >> $runfile
2785	echo "export cpurest=$cpurest" >> $runfile
2786	echo "export fname=$fname" >> $runfile
2787	echo "export localhost=$localhost" >> $runfile
2788	echo "export return_addres=$return_addres" >> $runfile
2789	echo "export return_username=$return_username" >> $runfile
2790	echo "export tasks_per_node=$tasks_per_node" >> $runfile
2791	echo "export write_binary=$write_binary" >> $runfile
2792	echo "export use_seperate_pe_for_dvrp_output=$use_seperate_pe_for_dvrp_output" >> $runfile
2793	echo "./a.out" >> $runfile
2794	chmod u+x $runfile
2795
2796	if [[ "$QUEUE" = interactive ]]
2797	then
2798	mpirun -np $numprocs a.out $ROPTS
2799	else
2800	(( mem_tsubame = 31.0 / $tasks_per_node ))
2801	echo "Memory for Tsubame in GB:", $mem_tsubame
2802	# n1ge -fore -g 1S060156 -mpi $numprocs -mem 4 -N palm -q $queue a.out $ROPTS
2803	/n1ge/TITECH_GRID/tools/bin/n1ge -fore -g $group_number -mpi ${numprocs}:$tasks_per_node -mem $mem_tsubame -N palm -rt $minuten -q $queue a.out $ROPTS
2804	fi
2805
2806	rm $runfile
2807	else
2808	mpprun -n $numprocs a.out $ROPTS
2809	fi
2810	[[ $? != 0 ]] && execution_error=true
2811
2812
2813	# PERFORMANCE-AUSWERTUNG MIT APPRENTICE
2814	if [[ "$cond1" = apprentice \|\| "$cond2" = apprentice ]]
2815	then
2816	apprentice
2817	fi
2818	else
2819	a.out $ROPTS
2820	fi
2821	fi
2822	if [[ $? != 0 \|\| $execution_error = true ]]
2823	then
2824
2825	# ABBRUCH BEI LAUFZEITFEHLER
2826	# [[ ! ( "$cond1" = debug \|\| "$cond2" = debug ) ]] && cat aout_output*
2827	printf "\n +++ runtime error occured"
2828	locat=execution
2829	exit
2830	else
2831	# [[ ! ( "$cond1" = debug \|\| "$cond2" = debug ) ]] && cat aout_output*
2832	printf "\n$striche\n *** execution finished \n"
2833	fi
2834
2835
2836
2837	# EVENTUELLE OUTPUT-KOMMANDOS ABARBEITEN
2838	(( i = 0 ))
2839	while (( i < ioc ))
2840	do
2841	(( i = i + 1 ))
2842	if (( i == 1 ))
2843	then
2844	printf "\n\n *** execution of OUTPUT-commands:\n$striche"
2845	fi
2846	printf "\n >>> ${out_command[$i]}"
2847	eval ${out_command[$i]}
2848	if (( i == ioc ))
2849	then
2850	printf "\n$striche\n"
2851	fi
2852	done
2853
2854
2855	# EVTL. INHALT DES AKTUELLEN VERZEICHNISSES AUSGEBEN
2856	if [[ $do_trace = true ]]
2857	then
2858	printf "\n\n"
2859	ls -al
2860	fi
2861
2862
2863
2864	# OUTPUT-DATEIEN AN IHRE ZIELORTE KOPIEREN
2865	(( i = 0 ))
2866	while (( i < iout ))
2867	do
2868	(( i = i + 1 ))
2869	if (( i == 1 ))
2870	then
2871	printf "\n\n *** saving OUTPUT-files:\n$striche"
2872	fi
2873
2874	# PRUEFEN, OB EINZELDATEI ODER DATEI PRO PROZESSOR
2875	files_for_pes=false; filetyp=file
2876	if [[ "${actionout[$i]}" = pe && -n $numprocs ]]
2877	then
2878	files_for_pes=true; filetyp=directory
2879	actionout[$i]=""
2880	elif [[ "${actionout[$i]}" = pe && ! -n $numprocs ]]
2881	then
2882	actionout[$i]=""
2883	elif [[ "${actionout[$i]}" = arpe && -n $numprocs ]]
2884	then
2885	files_for_pes=true; filetyp=directory
2886	actionout[$i]="ar"
2887	elif [[ "${actionout[$i]}" = arpe && ! -n $numprocs ]]
2888	then
2889	actionout[$i]="ar"
2890	elif [[ "${actionout[$i]}" = flpe && -n $numprocs ]]
2891	then
2892	files_for_pes=true; filetyp=directory
2893	actionout[$i]="fl"
2894	elif [[ "${actionout[$i]}" = flpe && ! -n $numprocs ]]
2895	then
2896	actionout[$i]="fl"
2897	elif [[ "${actionout[$i]}" = trpe && -n $numprocs ]]
2898	then
2899	files_for_pes=true; filetyp=directory
2900	actionout[$i]="tr"
2901	elif [[ "${actionout[$i]}" = trpe && ! -n $numprocs ]]
2902	then
2903	actionout[$i]="tr"
2904	fi
2905
2906	if [[ ! -f ${localout[$i]} && $files_for_pes = false ]]
2907	then
2908	printf "\n +++ temporary OUTPUT-file ${localout[$i]} does not exist\n"
2909	elif [[ ! -f ${localout[$i]}/_0000 && $files_for_pes = true ]]
2910	then
2911	printf "\n +++ temporary OUTPUT-file ${localout[$i]}/.... does not exist\n"
2912	else
2913
2914
2915	# KOPIEREN PER FTP/SCP (IMMER IM BINAERMODUS, -M: FALLS ZIELKATALOG
2916	# NICHT VORHANDEN, WIRD VERSUCHT, IHN ANZULEGEN), ABER NUR BEI
2917	# REMOTE-RECHNUNGEN
2918	if [[ "${actionout[$i]}" = tr ]]
2919	then
2920	if [[ $localhost != $fromhost ]]
2921	then
2922	if [[ $files_for_pes = false ]]
2923	then
2924	cps=""
2925	cst=""
2926	else
2927	cps=-c
2928	cst="/"
2929	fi
2930	if [[ $localhost = ibmh \|\| $localhost = ibmb \|\| $localhost = nech ]]
2931	then
2932
2933	# TRANSFER IN EIGENSTAENDIGEM JOB
2934	# ZUERST KOPIE DER DATEI INS TEMPORAERE DATENVERZEICHNIS
2935	[[ ! -d $tmp_data_catalog/TRANSFER ]] && mkdir -p $tmp_data_catalog/TRANSFER
2936	file_to_transfer=${fname}_${localout[$i]}_to_transfer_$kennung
2937	if [[ $files_for_pes = false ]]
2938	then
2939	ln -f ${localout[$i]} $tmp_data_catalog/TRANSFER/$file_to_transfer
2940	else
2941	mkdir $tmp_data_catalog/TRANSFER/$file_to_transfer
2942	ln ${localout[$i]}/* $tmp_data_catalog/TRANSFER/$file_to_transfer
2943	fi
2944
2945	echo "set -x" > transfer_${localout[$i]}
2946	echo "cd $tmp_data_catalog/TRANSFER" >> transfer_${localout[$i]}
2947
2948	printf "\n >>> OUTPUT: ${localout[$i]}$cst by SCP in seperate job to"
2949	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}$cst"
2950	printf "\n or higher cycle\n"
2951	echo "batch_scp $cps -b -m -u $return_username $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
2952
2953	echo "[[ \$? = 0 ]] && rm $file_to_transfer" >> transfer_${localout[$i]}
2954
2955	if [[ $localhost = nech ]]
2956	then
2957	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 900 transfer_${localout[$i]}
2958	else
2959	if [[ "$LOGNAME" = b323013 ]]
2960	then
2961	subjob -v -q c1 -X 0 -m 1000 -t 900 transfer_${localout[$i]}
2962	else
2963	subjob -d -v -q c1 -X 0 -m 1000 -t 900 transfer_${localout[$i]}
2964	fi
2965	fi
2966
2967	else
2968
2969	# TRANSFER INNERHALB DIESES JOBS
2970	transfer_failed=false
2971	printf "\n >>> OUTPUT: ${localout[$i]}$cst by SCP to"
2972	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}$cst\n"
2973	batch_scp $cps -b -m -u $return_username $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
2974	[[ $? != 0 ]] && transfer_failed=true
2975
2976	# BEI FEHLGESCHLAGENEM TRANSFER SICHERUNGSKOPIE AUF
2977	# LOKALER MASCHINE ANLEGEN
2978	if [[ $transfer_failed = true ]]
2979	then
2980	printf " +++ transfer failed. Trying to save a copy on the local host under:\n"
2981	printf " ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung\n"
2982
2983	# ERSTMAL PRUEFEN, OB VERZEICHNIS EXISTIERT. GEGEBENENFALLS
2984	# ANLEGEN.
2985	eval local_catalog=${pathout[$i]}
2986	if [[ ! -d $local_catalog ]]
2987	then
2988	printf " *** local directory does not exist. Trying to create:\n"
2989	printf " $local_catalog \n"
2990	mkdir -p $local_catalog
2991	fi
2992	eval cp ${localout[$i]} ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung
2993	transfer_problems=true
2994	fi
2995	fi
2996	else
2997
2998	# WERTZUWEISUNG, SO DASS WEITER UNTEN NUR KOPIERT WIRD
2999	actionout[$i]=""
3000	fi
3001	fi
3002
3003
3004	# APPEND PER FTP/SCP (IMMER IM BINAERMODUS, -M: FALLS ZIELKATALOG
3005	# NICHT VORHANDEN, WIRD VERSUCHT, IHN ANZULEGEN), ABER NUR BEI
3006	# REMOTE-RECHNUNGEN
3007	if [[ "${actionout[$i]}" = tra ]]
3008	then
3009	if [[ $localhost != $fromhost ]]
3010	then
3011	if [[ $localhost = ibmh \|\| $localhost = ibmb \|\| $localhost = nech ]]
3012	then
3013
3014	# TRANSFER IN EIGENSTAENDIGEM JOB
3015	# ZUERST KOPIE DER DATEI INS TEMPORAERE DATENVERZEICHNIS
3016	[[ ! -d $tmp_data_catalog/TRANSFER ]] && mkdir -p $tmp_data_catalog/TRANSFER
3017	file_to_transfer=${fname}_${localout[$i]}_to_transfer_$kennung
3018	ln -f ${localout[$i]} $tmp_data_catalog/TRANSFER/$file_to_transfer
3019
3020	echo "set -x" > transfer_${localout[$i]}
3021	echo "cd $tmp_data_catalog/TRANSFER" >> transfer_${localout[$i]}
3022
3023	printf "\n >>> OUTPUT: ${localout[$i]} append by SCP in seperate job to"
3024	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}"
3025	printf "\n or higher cycle\n"
3026	echo "batch_scp -A -b -m -u $return_username $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
3027
3028	echo "[[ \$? = 0 ]] && rm $file_to_transfer" >> transfer_${localout[$i]}
3029
3030	if [[ $localhost = nech ]]
3031	then
3032	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 900 transfer_${localout[$i]}
3033	else
3034	if [[ $LOGNAME = b323013 ]]
3035	then
3036	subjob -v -q c1 -X 0 -m 1000 -t 900 transfer_${localout[$i]}
3037	else
3038	subjob -d -v -q c1 -X 0 -m 1000 -t 900 transfer_${localout[$i]}
3039	fi
3040	fi
3041
3042	else
3043
3044	# TRANSFER INNERHALB DIESES JOBS
3045	transfer_failed=false
3046	printf "\n >>> OUTPUT: ${localout[$i]} append by SCP to"
3047	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}\n"
3048	batch_scp -A -b -m -u $return_username $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
3049	[[ $? != 0 ]] && transfer_failed=true
3050
3051	# BEI FEHLGESCHLAGENEM TRANSFER SICHERUNGSKOPIE AUF
3052	# LOKALER MASCHINE ANLEGEN
3053	if [[ $transfer_failed = true ]]
3054	then
3055	printf " +++ transfer failed. Trying to save a copy on the local host under:\n"
3056	printf " ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung\n"
3057
3058	# ERSTMAL PRUEFEN, OB VERZEICHNIS EXISTIERT. GEGEBENENFALLS
3059	# ANLEGEN
3060	eval local_catalog=${pathout[$i]}
3061	if [[ ! -d $local_catalog ]]
3062	then
3063	printf " *** local directory does not exist. Trying to create:\n"
3064	printf " $local_catalog \n"
3065	mkdir -p $local_catalog
3066	fi
3067
3068	eval cp ${localout[$i]} ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung
3069	transfer_problems=true
3070	fi
3071	fi
3072	else
3073
3074	# WERTZUWEISUNG, SO DASS WEITER UNTEN NUR APPEND AUF
3075	# LOKALER MASCHINE DURCHGEFUEHRT WIRD
3076	actionout[$i]=a
3077	fi
3078	fi
3079
3080
3081	# OUTPUT-DATEI FUER EINEN FORTSETZUNGSLAUF. DATEI WIRD PER
3082	# LINK AUF DEN TEMPORAEREN DATENKATALOG GELEGT. OPTION -f WIRD
3083	# VERWENDET, FALLS DORT NOCH EINE DATEI GLEICHEN NAMENS VORHANDEN
3084	# SEIN SOLLTE. ANSCHLIESSEND WIRD SEINE ARCHIVIERUNG ANGESTOSSEN
3085	if [[ "${actionout[$i]}" = fl ]]
3086	then
3087	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
3088	chmod g+rx $tmp_data_catalog
3089	if [[ $files_for_pes = false ]]
3090	then
3091	printf "\n >>> OUTPUT: ${localout[$i]} to"
3092	printf "\n $tmp_data_catalog/${frelout[$i]} (temporary data catalog)\n"
3093	ln -f ${localout[$i]} $tmp_data_catalog/${frelout[$i]}
3094	else
3095	printf "\n >>> OUTPUT: ${localout[$i]}/.... to"
3096	printf "\n $tmp_data_catalog/${frelout[$i]} (temporary data catalog)\n"
3097	mkdir $tmp_data_catalog/${frelout[$i]}
3098	ln -f ${localout[$i]}/* $tmp_data_catalog/${frelout[$i]}
3099	fi
3100
3101
3102	# ARCHIVIERUNGSJOB WIRD ERZEUGT UND ABGESCHICKT
3103	if [[ $store_on_archive_system = true ]]
3104	then
3105
3106	if [[ $archive_system = asterix ]]
3107	then
3108	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3109	if [[ $files_for_pes = false ]]
3110	then
3111	echo "stageout ${frelout[$i]} > STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3112	else
3113	echo "stageout -t ${frelout[$i]} > STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3114	fi
3115	echo "cat STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3116	echo "if [[ \$(grep -c \"st.msg:150\" STAGE_OUTPUT${i}_$kennung) != 0 ]]" >> archive_${frelout[$i]}
3117	echo "then" >> archive_${frelout[$i]}
3118	echo " do_stageout=false" >> archive_${frelout[$i]}
3119	echo "else" >> archive_${frelout[$i]}
3120	echo " echo \" +++ $filetyp ${frelout[$i]} could not be stored on archive-system\" " >> archive_${frelout[$i]}
3121	echo " cat /dev/null > ~/job_queue/ARCHIVE_ERROR_$fname" >> archive_${frelout[$i]}
3122	echo " cat STAGE_OUTPUT${i}_$kennung > ~/job_queue/archive_${frelout[$i]}_error" >> archive_${frelout[$i]}
3123	echo " echo \" *** $filetyp ${frelout[$i]} will be copied to \$WORK as backup\" " >> archive_${frelout[$i]}
3124	if [[ $files_for_pes = false ]]
3125	then
3126	echo " cp ${frelout[$i]} \$WORK" >> archive_${frelout[$i]}
3127	else
3128	echo " cp -r ${frelout[$i]} \$WORK/${frelout[$i]}" >> archive_${frelout[$i]}
3129	fi
3130	echo " echo \" *** $filetyp ${frelout[$i]} saved\" " >> archive_${frelout[$i]}
3131	echo "fi" >> archive_${frelout[$i]}
3132	echo "rm STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3133	elif [[ $archive_system = DMF ]]
3134	then
3135	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3136	if [[ $files_for_pes = false ]]
3137	then
3138	printf "\n +++ archiving of single files impossible with $archive_system !\n"
3139	locat=DMF
3140	exit
3141	else
3142	# FUER RECHNER IN JUELICH. DORT KOENNTEN AUCH
3143	# EINZELNE DATEIEN GESICHERT WERDEN (SPAETER KORR.)
3144	echo "rm -rf \$ARCHIVE/${frelout[$i]}" >> archive_${frelout[$i]}
3145	echo "cp -r ${frelout[$i]} \$ARCHIVE" >> archive_${frelout[$i]}
3146	fi
3147	elif [[ $archive_system = tivoli ]]
3148	then
3149	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3150	if [[ $files_for_pes = false ]]
3151	then
3152	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3153	echo "set -x" >> archive_${frelout[$i]}
3154	echo "rm -rf \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3155	echo "cp ${frelout[$i]} \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3156	else
3157
3158	echo "set -x" >> archive_${frelout[$i]}
3159	echo "rm -rf \$PERM/${frelout[$i]}/*" >> archive_${frelout[$i]}
3160	echo "[[ ! -d \$PERM/${frelout[$i]} ]] && mkdir $PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3161	cd $tmp_data_catalog
3162	all_files=`ls -1 ${frelout[$i]}/*`
3163	cd - > /dev/null
3164	(( inode = 0 ))
3165	(( tp1 = tasks_per_node + 1 ))
3166	while (( inode < nodes ))
3167	do
3168	# echo "*** all_files = \"$all_files\" "
3169	files=`echo $all_files \| cut -d" " -f1-$tasks_per_node`
3170	all_files=`echo $all_files \| cut -d" " -f$tp1-`
3171	# echo "*** tasks_per_node = \"$tasks_per_node\" "
3172	# echo "*** files = \"$files\" "
3173	# echo "*** all_files = \"$all_files\" "
3174	echo "tar cvf \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar $files" >> archive_${frelout[$i]}
3175	echo "dsmc incremental \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar" >> archive_${frelout[$i]}
3176	echo "dsmmigrate \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar" >> archive_${frelout[$i]}
3177	(( inode = inode + 1 ))
3178	done
3179	# echo "rm -rf \$PERM/${frelout[$i]}.tar" >> archive_${frelout[$i]}
3180	# echo "tar cvf \$PERM/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
3181	fi
3182	elif [[ $archive_system = ut ]]
3183	then
3184	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3185	if [[ $files_for_pes = false ]]
3186	then
3187	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3188	echo "set -x" >> archive_${frelout[$i]}
3189	echo "rm -rf \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3190	echo "cp ${frelout[$i]} \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3191	else
3192
3193	echo "set -x" >> archive_${frelout[$i]}
3194	echo "rm -rf \$UT/${frelout[$i]}/*" >> archive_${frelout[$i]}
3195	echo "[[ ! -d \$UT/${frelout[$i]} ]] && mkdir $UT/${frelout[$i]}" >> archive_${frelout[$i]}
3196	cd $tmp_data_catalog
3197	all_files=`ls -1 ${frelout[$i]}/*`
3198	cd - > /dev/null
3199	(( inode = 0 ))
3200	(( tp1 = tasks_per_node + 1 ))
3201	while (( inode < nodes ))
3202	do
3203	files=`echo $all_files \| cut -d" " -f1-$tasks_per_node`
3204	all_files=`echo $all_files \| cut -d" " -f$tp1-`
3205	echo "tar cvf \$UT/${frelout[$i]}/${frelout[$i]}.node_$inode.tar $files" >> archive_${frelout[$i]}
3206	(( inode = inode + 1 ))
3207	done
3208	fi
3209	elif [[ $archive_system = none ]]
3210	then
3211	printf " +++ archiving on $localhost not available!\n"
3212	fi
3213
3214	if [[ $archive_system != none ]]
3215	then
3216	if [[ $localhost = ibmh \|\| $localhost = ibmb ]]
3217	then
3218	# subjob -d -v -q cdata -X 0 -m 1000 -t 43200 archive_${frelout[$i]}
3219	subjob -v -q cdata -X 0 -m 1000 -t 43200 archive_${frelout[$i]}
3220	elif [[ $localhost = nech ]]
3221	then
3222	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 7200 archive_${frelout[$i]}
3223	fi
3224	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
3225	fi
3226	else
3227	printf " +++ caution: option -A is switched on. No archiving on $archive_system!\n"
3228	fi
3229
3230
3231	# LEERDATEI IM BENUTZERVERZEICHNIS ANLEGEN, DAMIT BEKANNT IST,
3232	# WIE DIE HOECHSTE ZYKLUSNUMMER AUF DEM ARCHIV-SYSTEM LAUTET
3233	if [[ $files_for_pes = false ]]
3234	then
3235	cat /dev/null > ${pathout[$i]}
3236	else
3237	mkdir -p ${pathout[$i]}
3238	fi
3239
3240	fi
3241
3242
3243	# KOPIEREN AUF LOKALER MASCHINE ZUM ARCHIV-SYSTEM
3244	# AUSSERDEM MUSS LEERDATEI ANGELEGT WERDEN, DAMIT BEKANNT IST,
3245	# WIE DIE HOECHSTE ZYKLUSNUMMER AUF DEM ARCHIV-SYSTEM LAUTET
3246	# FALLS IRGENDEINE (VON MEHREREN) ARCHIVIERUNGEN SCHIEF GEHT,
3247	# WIRD FLAG GESETZT UND BLEIBT AUCH BEI WEITEREN ORDNUNGS-
3248	# GEMAESSEN ARCHIVIERUNGEN GESETZT
3249	if [[ "${actionout[$i]}" = ar ]]
3250	then
3251	if [[ $files_for_pes = false ]]
3252	then
3253	printf "\n >>> OUTPUT: ${localout[$i]} to"
3254	printf "\n ${pathout[$i]}"
3255	printf "\n File will be copied to archive-system ($archive_system) !\n"
3256	else
3257	printf "\n >>> OUTPUT: ${localout[$i]}/_.... to"
3258	printf "\n ${pathout[$i]}"
3259	printf "\n Directory will be copied to archive-system ($archive_system) !\n"
3260	fi
3261	mv ${localout[$i]} ${frelout[$i]}
3262
3263	file_saved=false
3264
3265	if [[ $archive_system = asterix ]]
3266	then
3267	do_stageout=true
3268	(( stageout_anz = 0 ))
3269	while [[ $do_stageout = true ]]
3270	do
3271	if [[ $files_for_pes = false ]]
3272	then
3273	stageout ${frelout[$i]} > STAGE_OUTPUT
3274	else
3275	stageout -t ${frelout[$i]} > STAGE_OUTPUT
3276	fi
3277	cat STAGE_OUTPUT
3278	if [[ $(grep -c "st.msg:150" STAGE_OUTPUT) != 0 ]]
3279	then
3280	file_saved=true
3281	do_stageout=false
3282	else
3283	if [[ $files_for_pes = false ]]
3284	then
3285	printf "\n +++ file ${frelout[$i]} could not be saved on archive-system"
3286	else
3287	printf "\n +++ directory ${frelout[$i]} could not be saved on archive-system"
3288	fi
3289	(( stageout_anz = stageout_anz + 1 ))
3290	if (( stageout_anz == 10 ))
3291	then
3292	printf "\n +++ stoped after 10 unsuccessful tries!"
3293	archive_save=false
3294	do_stageout=false
3295	else
3296	printf "\n *** new try to store on archive after 15 min:"
3297	sleep 900
3298	fi
3299	fi
3300	done
3301	elif [[ $archive_system = DMF ]]
3302	then
3303	if [[ $files_for_pes = false ]]
3304	then
3305	printf "\n +++ archiving of single files impossible on $archive_system!\n"
3306	locat=DMF
3307	exit
3308	else
3309	rm -rf $ARCHIVE/${frelout[$i]}
3310	cp -r ${frelout[$i]} $ARCHIVE
3311	fi
3312	file_saved=true
3313	elif [[ $archive_system = tivoli ]]
3314	then
3315	# ARCHIVIERUNG NUR PER BATCH-JOB MOEGLICH
3316	# DATEI MUSS ZWISCHENZEITLICH INS TEMPORAERE DATENVERZEICHNIS
3317	# GELEGT WERDEN
3318	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
3319	chmod g+rx $tmp_data_catalog
3320	if [[ $files_for_pes = false ]]
3321	then
3322	ln -f ${frelout[$i]} $tmp_data_catalog/${frelout[$i]}
3323	else
3324	mkdir $tmp_data_catalog/${frelout[$i]}
3325	ln -f ${frelout[$i]}/* $tmp_data_catalog/${frelout[$i]}
3326	fi
3327
3328	# BATCH JOB GENERIEREN UND ABSCHICKEN; DATEI MUSS WIEDER
3329	# AUS TEMPORAEREM DATENVERZEICHNIS ENTFERNT WERDEN
3330	echo "cd $tmp_data_catalog" > archive_${frelout[$i]}
3331	if [[ $files_for_pes = false ]]
3332	then
3333	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3334	echo "rm -rf \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3335	echo "cp ${frelout[$i]} \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3336	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3337	else
3338	echo "rm -rf \$PERM/${frelout[$i]}.tar" >> archive_${frelout[$i]}
3339	echo "tar cvf \$PERM/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
3340	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3341	fi
3342
3343	subjob -v -d -q cdata -X 0 -m 1000 -t 43200 archive_${frelout[$i]}
3344	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
3345	file_saved=true
3346
3347	elif [[ $archive_system = ut ]]
3348	then
3349	# ARCHIVIERUNG NUR PER BATCH-JOB MOEGLICH
3350	# DATEI MUSS ZWISCHENZEITLICH INS TEMPORAERE DATENVERZEICHNIS
3351	# GELEGT WERDEN
3352	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
3353	chmod g+rx $tmp_data_catalog
3354	if [[ $files_for_pes = false ]]
3355	then
3356	ln -f ${frelout[$i]} $tmp_data_catalog/${frelout[$i]}
3357	else
3358	mkdir $tmp_data_catalog/${frelout[$i]}
3359	ln -f ${frelout[$i]}/* $tmp_data_catalog/${frelout[$i]}
3360	fi
3361
3362	# BATCH JOB GENERIEREN UND ABSCHICKEN; DATEI MUSS WIEDER
3363	# AUS TEMPORAEREM DATENVERZEICHNIS ENTFERNT WERDEN
3364	echo "cd $tmp_data_catalog" > archive_${frelout[$i]}
3365	if [[ $files_for_pes = false ]]
3366	then
3367	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3368	echo "rm -rf \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3369	echo "cp ${frelout[$i]} \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3370	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3371	else
3372	echo "rm -rf \$UT/${frelout[$i]}.tar" >> archive_${frelout[$i]}
3373	echo "tar cvf \$UT/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
3374	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3375	fi
3376
3377	subjob -v -c /pf/b/$usern/job_queue -d -q pp -X 0 -m 1000 -t 7200 archive_${frelout[$i]}
3378	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
3379	file_saved=true
3380
3381	else
3382	printf "\n +++ archive_system=\"$archive_system\" archiving impossible!"
3383	archive_save=false
3384	fi
3385	if [[ $file_saved = true ]]
3386	then
3387	if [[ $files_for_pes = false ]]
3388	then
3389	cat /dev/null > ${pathout[$i]}
3390	else
3391	mkdir -p ${pathout[$i]}
3392	fi
3393	fi
3394	fi
3395
3396	# APPEND AUF LOKALER MASCHINE
3397	if [[ "${actionout[$i]}" = "a" ]]
3398	then
3399	printf "\n >>> OUTPUT: ${localout[$i]} append to ${pathout[$i]}\n"
3400	cat ${localout[$i]} >> ${pathout[$i]}
3401	fi
3402
3403	# KOPIEREN AUF LOKALER MASCHINE
3404	# ES MUSS KOPIERT WERDEN, DA MOVE NICHT UEBER FILESYSTEM HINAUS MOEGLICH
3405	if [[ "${actionout[$i]}" = "" && $files_for_pes = false ]]
3406	then
3407
3408	# KOPIEREN AUF EINPROZESSORMASCHINE
3409	if [[ "${extout[$i]}" != " " && "${extout[$i]}" != "" ]]
3410	then
3411	printf "\n >>> OUTPUT: ${localout[$i]} to ${pathout[$i]}.${extout[$i]}\n"
3412	cp ${localout[$i]} ${pathout[$i]}.${extout[$i]}
3413	else
3414	printf "\n >>> OUTPUT: ${localout[$i]} to ${pathout[$i]}\n"
3415	cp ${localout[$i]} ${pathout[$i]}
3416	fi
3417
3418	elif [[ "${actionout[$i]}" = "" && $files_for_pes = true ]]
3419	then
3420
3421	# DIE DEN PROZESSOREN EINES PARALLELRECHNERS ZUGEHOERIGEN
3422	# DATEIEN WERDEN ERST IN EINEM KATALOG GESAMMELT UND DIESER
3423	# WIRD DANN KOPIERT
3424	# PER MOVE UMBENANNT WERDEN
3425	printf "\n >>> OUTPUT: ${localout[$i]}/_.... to ${pathout[$i]}\n"
3426	cp -r ${localout[$i]} ${pathout[$i]}
3427
3428	fi
3429	fi
3430	done
3431	if (( i != 0 ))
3432	then
3433	if [[ $transfer_problems = true ]]
3434	then
3435	printf "\n$striche\n *** OUTPUT-files saved"
3436	printf "\n +++ WARNING: some data transfers failed! \n"
3437	else
3438	printf "\n$striche\n *** all OUTPUT-files saved \n"
3439	fi
3440	fi
3441
3442
3443	# EVENTUELL FOLGEJOB STARTEN
3444	# DATEI CONTINUE_RUN MUSS VOM BENUTZERPROGRAMM AUS ERZEUGT WERDEN
3445	if [[ -f CONTINUE_RUN ]]
3446	then
3447
3448	if [[ $archive_save = true ]]
3449	then
3450
3451	# ZUERST IN MRUN-AUFRUF OPTIONEN FUER FORTSETZUNGSLAUF, FUER
3452	# STILLES ABARBEITEN (OHNE INTERAKTIVE RUECKFAGEN) UND FUER
3453	# BATCH-BETRIEB (NUR WICHTIG, FALLS BATCH AUF LOKALER MASCHINE
3454	# DURCHGEFUEHRT WERDEN SOLL) EINFUEGEN, FALLS NICHT BEREITS VOR-
3455	# HANDEN
3456	[[ $(echo $mc \| grep -c "\-C") = 0 ]] && mc="$mc -C"
3457	[[ $(echo $mc \| grep -c "\-v") = 0 ]] && mc="$mc -v"
3458	[[ $(echo $mc \| grep -c "\-b") = 0 ]] && mc="$mc -b"
3459	if [[ $(echo $mc \| grep -c "#") != 0 ]]
3460	then
3461	mc=`echo $mc \| sed 's/#/f/g'`
3462	fi
3463
3464
3465	# JOB STARTEN
3466	printf "\n\n *** initiating restart-run on \"$return_addres\" using command:\n"
3467	echo " $mc"
3468	printf "\n$striche\n"
3469	if [[ $localhost != $fromhost ]]
3470	then
3471
3472	if [[ $localhost = nech \|\| $localhost = ibmb \|\| $localhost = ibmh \|\| $localhost = ibms \|\| $localhost = lctit ]]
3473	then
3474	echo "*** ssh will be used to initiate restart-runs!"
3475	echo " return_addres=\"$return_addres\" "
3476	echo " return_username=\"$return_username\" "
3477	if [[ $return_addres = 172.20.25.41 ]]
3478	then
3479	# WORKAROUND AUF SCIROCCO AM TIT
3480	print "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc " \| ssh $return_addres -l $return_username
3481	else
3482	ssh $return_addres -l $return_username "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc "
3483	fi
3484	else
3485	printf "\n +++ no restart mechanism available for host \"$localhost\" "
3486	locat=restart; exit
3487	fi
3488
3489	# WARTEN, DAMIT SICH RESTART JOB IN QUEUE EINREIHEN KANN, BEVOR
3490	# DER AKTUELLE JOB ENDET
3491	sleep 30
3492
3493	else
3494
3495	# BEI RECHNUNGEN AUF LOKALER MASCHINE KANN MRUN DIREKT AUFGE-
3496	# RUFEN WERDEN, AUSSER AUF lcfimm
3497	cd $LOCAL_PWD
3498	if [[ $localhost = lcfimm ]]
3499	then
3500	ssh $return_addres -l $return_username "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc "
3501	else
3502	eval $mc # ' MUESSEN AUSGEWERTET WERDEN
3503	fi
3504	cd - > /dev/null
3505	fi
3506	printf "\n$striche\n *** restart-run initiated \n"
3507
3508
3509	# EVENTUELL INPUT-DATEIEN, DIE VON TEMPORAEREM DATENVERZEICHNIS
3510	# GEHOLT WORDEN SIND, LOESCHEN
3511	(( i = 0 ))
3512	while (( i < iin ))
3513	do
3514	(( i = i + 1 ))
3515	if [[ "${got_tmp[$i]}" = true && $keep_data_from_previous_run = false ]]
3516	then
3517	rm -r $tmp_data_catalog/${frelin[$i]}
3518	fi
3519	done
3520
3521	else
3522
3523	printf "\n +++ no restart-run possible, since errors occured"
3524	printf "\n during the archive process"
3525	fi
3526
3527	fi
3528
3529
3530
3531	# EVTL. EMAIL-BENACHRICHTIGUNG UEBER ABGESCHLOSSENEN LAUF
3532	if [[ "$email_notification" != "" ]]
3533	then
3534
3535	if [[ $localhost != $fromhost ]]
3536	then
3537	if [[ -f CONTINUE_RUN ]]
3538	then
3539	echo "PALM restart run necessary" > email_text
3540	echo "description header of actual run:" >> email_text
3541	cat CONTINUE_RUN >> email_text
3542	echo "mrun-command to restart:" >> email_text
3543	echo "$mc" >> email_text
3544	else
3545	echo "PALM run with base filename \"$fname\" on host \"$localhost\" finished" > email_text
3546	fi
3547	mail $email_notification < email_text
3548	printf "\n *** email notification sent to \"$email_notification\" "
3549	fi
3550	fi
3551
3552
3553
3554	# ALLE ARBEITEN BEENDET. TEMPORAERER KATALOG KANN GELOESCHT WERDEN
3555	cd $HOME
3556	[[ $delete_temporary_catalog = true ]] && rm -rf $TEMPDIR
3557
3558	else
3559
3560
3561	# FALLS AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL, WERDEN JETZT ENTSPRE-
3562	# CHENDE AKTIONEN DURCHGEFUEHRT
3563
3564	# MRUN-BEFEHL FUER REMOTE-MASCHINE ZUSAMMENSTELLEN
3565	mrun_com="$mrun_script_name -a $afname -c $config_file -d $fname -h $host -H $fromhost -m $memory -t $cpumax -q $queue -R $return_addres -U $return_username -u $remote_username"
3566	[[ "$cpp_opts" != "" ]] && mrun_com=${mrun_com}" -D \"$cpp_opts\""
3567	[[ "$global_revision" != "" ]] && mrun_com=${mrun_com}" -G \"$global_revision\""
3568	[[ $group_number != none ]] && mrun_com=${mrun_com}" -g $group_number"
3569	[[ $do_compile = true ]] && mrun_com=${mrun_com}" -s \"$source_list\""
3570	[[ "$input_list" != "" ]] && mrun_com=${mrun_com}" -i \"$input_list\""
3571	[[ $ignore_archive_error = true ]] && mrun_com=${mrun_com}" -I"
3572	[[ $keep_data_from_previous_run = true ]] && mrun_com=${mrun_com}" -k"
3573	[[ "$additional_conditions" != "" ]] && mrun_com=${mrun_com}" -K \"$additional_conditions\""
3574	# [[ "$makefile" != "$source_path/Makefile" ]] && mrun_com=${mrun_com}" -M \"$makefile\""
3575	[[ "$output_list" != "" ]] && mrun_com=${mrun_com}" -o \"$output_list\""
3576	[[ "$read_from_config" = false ]] && mrun_com=${mrun_com}" -S"
3577	[[ $do_trace = true ]] && mrun_com=${mrun_com}" -x"
3578	[[ "$numprocs" != "" ]] && mrun_com=${mrun_com}" -X $numprocs"
3579	if [[ $use_openmp = true ]]
3580	then
3581	mrun_com=${mrun_com}" -O"
3582	[[ "$tasks_per_node" != "" ]] && mrun_com=${mrun_com}" -T $threads_per_task"
3583	else
3584	[[ "$tasks_per_node" != "" ]] && mrun_com=${mrun_com}" -T $tasks_per_node"
3585	fi
3586	[[ $store_on_archive_system = false ]] && mrun_com=${mrun_com}" -A"
3587	[[ $package_list != "" ]] && mrun_com=${mrun_com}" -p \"$package_list\""
3588	[[ $return_password != "" ]] && mrun_com=${mrun_com}" -P $return_password"
3589	[[ $delete_temporary_catalog = false ]] && mrun_com=${mrun_com}" -B"
3590	[[ $node_usage != default && $node_usage != sla3 ]] && mrun_com=${mrun_com}" -n $node_usage"
3591	[[ $run_coupled_model = true ]] && mrun_com=${mrun_com}" -Y"
3592	if [[ $do_remote = true ]]
3593	then
3594	printf "\n>>>> MRUN-command on execution host:\n>>>> $mrun_com \n"
3595	fi
3596
3597
3598	# ZUSAMMENSTELLUNG DES JOBSCRIPTS AUF DATEI jobfile
3599	jobfile=jobfile.$RANDOM
3600
3601
3602	# TEMPORAERES VERZEICHNIS GENERIEREN UND NACH DORT WECHSELN
3603	echo "mkdir $TEMPDIR" >> $jobfile
3604	echo "cd $TEMPDIR" >> $jobfile
3605
3606
3607	# EVENTUELL FEHLERVERFOLGUNG AKTIVIEREN
3608	if [[ $do_trace = true ]]
3609	then
3610	echo "set -x" >> $jobfile
3611	else
3612	echo "set +vx" >> $jobfile
3613	fi
3614
3615
3616	# ABSPEICHERN DER QUELLTEXTE (NUR FALLS UEBERSETZT WERDEN SOLL)
3617	# SOWIE GEGEBENENFALLS DES MAKEFILES
3618	if [[ $do_compile = true ]]
3619	then
3620
3621	source_catalog=SOURCES_FOR_RUN_$fname
3622
3623	# UNTERVERZEICHNIS FUER QUELLTEXTE UND MAKEFILE ANLEGEN
3624	# MRUN WIRD DIESES VRZEICHNIS UEBER ENVIRONMENT VARIABLE
3625	# MITGETEILT (UEBERSTEUERT ANGABE IN KONFIGURATIONSDATEI)
3626	echo "mkdir SOURCES_FOR_RUN_$fname" >> $jobfile
3627	echo "export SOURCES_COMPLETE=true" >> $jobfile
3628	echo "cd SOURCES_FOR_RUN_$fname" >> $jobfile
3629
3630	for filename in $source_list
3631	do
3632	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
3633	echo "cat > $filename << \"%END%\"" >> $jobfile
3634	cat $source_catalog/$filename >> $jobfile
3635	echo " " >> $jobfile
3636	echo "%END%" >> $jobfile
3637	echo " " >> $jobfile
3638	done
3639
3640	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
3641	echo "cat > Makefile << \"%END%\"" >> $jobfile
3642	cat $source_catalog/Makefile >> $jobfile
3643	echo " " >> $jobfile
3644	echo "%END%" >> $jobfile
3645	echo " " >> $jobfile
3646
3647	echo "cd - > /dev/null" >> $jobfile
3648
3649	fi
3650
3651
3652	# ABSPEICHERN DER KONFIGURATIONSDATEI
3653	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
3654	echo "cat > $config_file << \"%END%\"" >> $jobfile
3655	cat $config_file >> $jobfile
3656	echo "%END%" >> $jobfile
3657	echo " " >> $jobfile
3658
3659
3660	# ABSPEICHERN DER AKTUELLEN MRUN-VERSION
3661	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
3662	echo "cat > $mrun_script_name <<\"%END%\"" >> $jobfile
3663	cat ${PALM_BIN}/$mrun_script_name >> $jobfile
3664	echo "%END%" >> $jobfile
3665	if [[ $host = lctit ]]
3666	then
3667	echo "sed 's/bin\/ksh/home2\/usr5\/mkanda\/pub\/ksh/' < $mrun_script_name > mrun_new" >> $jobfile
3668	echo "mv mrun_new $mrun_script_name" >> $jobfile
3669	fi
3670	echo "chmod u+x $mrun_script_name" >> $jobfile
3671	echo "execute_mrun=true" >> $jobfile
3672	echo " " >> $jobfile
3673
3674	# EVTL. BENOETIGTE INPUT-DATEIEN PER FTP HOLEN ODER DEM JOB DIREKT
3675	# MITGEBEN UND AUF DEM REMOTE-RECHNER IM BENUTZERVERZEICHNIS ABLEGEN
3676	# FALLS DIESES NICHT EXISTIERT, WIRD VERSUCHT, DAS JEWEILS LETZTE
3677	# UNTERVERZEICHNIS DES PFADNAMENS ANZULEGEN
3678	if [[ $do_remote = true ]]
3679	then
3680	(( i = 0 ))
3681	while (( i < iin ))
3682	do
3683	(( i = i + 1 ))
3684	echo "[[ ! -d ${pathin[$i]} ]] && mkdir -p ${pathin[$i]}" >> $jobfile
3685	if [[ "${transin[$i]}" = job ]]
3686	then
3687	echo "cat > ${remotepathin[$i]} <<\"%END%\"" >> $jobfile
3688	eval cat ${pathin[$i]}/${frelin[$i]} >> $jobfile
3689	echo " " >> $jobfile
3690	echo "%END%" >> $jobfile
3691	else
3692	echo "batch_scp -b -o -g -s -u $return_username $return_addres ${remotepathin[$i]} \"${pathin[$i]}\" ${frelin[$i]}" >> $jobfile
3693	fi
3694
3695	# UEBERPRUEFEN, OB DATEI ANGELEGT WERDEN KONNTE
3696	echo "if [[ \$? = 1 ]]" >> $jobfile
3697	echo "then" >> $jobfile
3698	echo " echo \" \" " >> $jobfile
3699	echo " echo \"+++ file ${remotepathin[$i]} could not be created\" " >> $jobfile
3700	echo " echo \" please check, if directory exists on $host!\" " >> $jobfile
3701	echo " echo \"+++ MRUN will not be continued\" " >> $jobfile
3702	echo " execute_mrun=false" >> $jobfile
3703	echo "fi" >> $jobfile
3704	done
3705	fi
3706
3707	# ARBEITSKATALOG AUF DER LOKALEN MASCHINE FUER EVENTUELLE
3708	# FORTSETZUNGSLAUEFE PER ENV-VARIABLE UEBERGEBEN
3709	echo "LOCAL_PWD=$working_directory" >> $jobfile
3710	echo "export LOCAL_PWD" >> $jobfile
3711
3712	# EBENSO LOKALEN MRUN-KATALOG UEBERGEBEN
3713	echo "LOCAL_MRUN_PATH=$PALM_BIN" >> $jobfile
3714	echo "export LOCAL_MRUN_PATH" >> $jobfile
3715
3716	# WORKAROUND FUER RIAM-NEC-JOBS WEGEN PROFILE-SCHWIERIGKEITEN
3717	if [[ $localhost_realname = "gate" \|\| $localhost = lctit ]]
3718	then
3719	echo "export PALM_BIN=$PALM_BIN" >> $jobfile
3720	fi
3721
3722	# MRUN AUF ZIELRECHNER AUFRUFEN
3723	echo "set -x" >> $jobfile
3724	echo "[[ \$execute_mrun = true ]] && ./$mrun_com" >> $jobfile
3725
3726	echo 'ls -al; echo `pwd`' >> $jobfile
3727	echo "cd \$HOME" >> $jobfile
3728	echo "rm -rf $TEMPDIR" >> $jobfile
3729
3730
3731
3732
3733	# JOB PER SUBJOB STARTEN
3734	if [[ $silent = false ]]
3735	then
3736	printf "\n "
3737	else
3738	printf "\n\n"
3739	fi
3740
3741	subjob $job_on_file -h $host -u $remote_username -g $group_number -q $queue -m $memory -N $node_usage -t $cpumax $XOPT $TOPT $OOPT -n $fname -v $jobfile
3742	rm -rf $jobfile
3743
3744
3745	fi # ENDE REMOTE-TEIL
3746
3747
3748
3749	# ENDE DER PROZEDUR

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