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source: palm/trunk/SCRIPTS/mrun @ 123

Last change on this file since 123 was 123, checked in by letzel, 17 years ago
Bugfix for mrun
Property svn:keywords set to `Rev`
File size: 139.6 KB

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1	#!/bin/ksh
2	# mrun - Plot-Shellskript
3	# $Id: mrun 61 2007-03-12 05:42:06Z raasch $
4
5	# Prozedur zum Starten von Modellaeufen
6
7	# letzte Aenderung:
8	# 03/03/94 - Siggi - Entwicklungsbeginn
9	# 21/03/94 - Siggi - Entwicklungsabschluss (Version 1.0)
10	# 09/12/94 - Siggi - allexport unterbunden; statt dessen werden jetzt ein-
11	# zelne Variable exportiert. Dies ist noetig, weil an-
12	# sonsten irgendein Speicher ueberlaeuft und von mrun
13	# aufgerufene Programme (z.B. stageout) mit Fehlern
14	# abbrechen (too many arguments)
15	# 20/06/95 - Siggi - noclobber muss explizit abgeschaltet, da jetzt
16	# defaultmaessig im RRZN-Profile eingeschaltet
17	# 10/06/97 - Siggi - Zusaetzliche Option -C bei cpp, damit // nicht
18	# wegfallen
19	# 25/04/00 - Siggi - Version 1.5
20	# remote_addres und remote_user in return_addres bzw.
21	# return_username umbenannt, return_username wird dem
22	# mrun-Aufruf im Job ueber Option -U mitgegeben.
23	# Neue Variable remote_username, die beim interaktiven
24	# mrun-Aufruf zwingend ueber die neue Option -u oder
25	# in der Konfigurationsdatei angegeben werden muss.
26	# 08/02/01 - Siggi - Alle mrun-Meldungen ins englische uebersetzt,
27	# Version 1.7
28	# 05/05/02 - Siggi - Uebersetzungen mittels make-Mechanismus moeglich
29	# 21/11/02 - Siggi - ENV-Variable XLFRTEOPTS wird vor Ausfuehrung auf
30	# IBM gesetzt, um Record-Laenge der NAMELIST-Dateien,
31	# zu bestimmen; Praeprozessoroptionen haben nun alle
32	# die Form -Dtext=text, weil auf IBM sonst text durch
33	# die leere Zeichenkette ersetzt wird
34	# 01/08/03 - Siggi - Test of implementing dvrp+1PE on ibm
35	# 07/01/04 - Siggi - additional preprocessor directive for ibm included
36	# (-D$OMP=OMP) in order to avoid problems with
37	# OMP_NUM_THREADS
38	# 04/01/05 - Siggi - archiving on hanni and berni is done in separate
39	# tar files, one for each node used
40	# 07/01/04 - Siggi - old code for t3e, vpp and hpcs eliminated
41	# 09/01/05 - Siggi - workaround for getting the IP address on gfdl3
42	# 17/01/05 - Siggi - job for data transfer to local machine now within
43	# job class c1 (HLRN)
44	# 27/01/05 - Siggi - IP address workaround for gfdl3 removed
45	# 28/01/05 - Siggi - tar-filenames on $PERM (HLRN) now include the
46	# base filename and cycle number
47	# 16/02/05 - Gerald - hababai validated
48	# 14/03/05 - Siggi - abort on NEC after first runtime error (F_ERRCNT)
49	# 29/03/05 - Marcus - berni*-en0 validated
50	# 21/04/05 - Siggi - transfer-job-protocol for avs-data is no more stored
51	# 24/04/05 - Siggi - netcdf support on lcmuk
52	# 25/04/05 - Siggi - netcdf support on gfld3 (decalpha)
53	# 11/05/05 - Siggi - files with non-numeric extensions (.xxx after cycle
54	# number) can now be used within interactive runs
55	# 12/05/05 - Siggi - netcdf support on ibm
56	# 13/05/05 - Siggi - error in tar-filenames on $PERM (HLRN) removed
57	# 18/05/05 - Siggi - netcdf support on nec
58	# 24/05/05 - Siggi - netcdf support on ibms
59	# 14/06/05 - Siggi - sleep interval after submit of restart job increased
60	# to 30 seconds
61	# 28/06/05 - Siggi - bora adjusted to new intel compiler (LD_LIBRARY_
62	# PATH is temporarily set)
63	# 07/09/05 - Siggi - setting of MP_EAGER_LIMIT switched off because it
64	# caused warnings in the job protocol
65	# 20/10/05 - Siggi - update of netcdf-version on decalpha (gfdl3)
66	# 25/10/05 - Siggi - error in listing files for getting the cycle number
67	# removed
68	# 26/10/05 - Siggi - new paths for dvrp-library, transfer of catalogs
69	# realized by file attribute trpe
70	# 28/10/05 - Siggi - if existing, the file extension is output in case
71	# of missing input file - no job abort in case of
72	# missing input files with file extensions
73	# (preliminary solution)
74	# 31/10/05 - Siggi - data transfer from nech now within seperate job
75	# 04/11/05 - Siggi - netcdf 3.6.0-p1 on ibmh/ibmb
76	# 07/12/05 - Siggi - gallego and elephanta admitted
77	# 30/12/05 - Siggi - gfdl5 (ibmy) admitted
78	# 10/01/06 - Siggi - cpp directive for NetCDF 64bit support
79	# 20/01/06 - Siggi - cpp directive for ibmy
80	# 09/02/06 - Siggi - ibmy admitted for batch mode
81	# 13/04/06 - Siggi - ostria admitted
82	# 18/04/06 - Siggi - usage of OpenMP implemented (additional option -O)
83	# 10/05/06 - Siggi - environment variable XLSMPOPTS set on IBM for
84	# optimization of OpenMP runs (option stacksize is
85	# necessary for large gridpoint numbers because
86	# otherwise a segmentation fault occurs)
87	# 23/05/05 - Siggi - lctit (SUN Fire X4600) admitted
88	# 21/08/06 - Siggi - standard mrun path on scirocco is as on bora
89	# 23/08/06 - Siggi - netcdf support for scirocco (notebook)
90	# 20/09/06 - Marcus - add DVRP library on nech
91	# 24/10/06 - Siggi - Environment variables for PALM steering are written
92	# on local NAMELIST file ENVPAR
93	# 24/11/06 - Siggi - levanto admitted, maestro switched to ifc 9.1
94	# 28/11/06 - Siggi - call to interpret_config.x_levanto because of SuSe 10
95	# 06/02/07 - Siggi - add DVRP library on lcmuk
96	# 07/02/07 - Siggi - revision of source code handling, source code is
97	# now expected in directory given by source_path and
98	# not in the current working directory, source code
99	# files provided in add_source_path are allways
100	# compiled, source code to be compiled is allways
101	# sampled in SOURCES_FOR_RUN_$fname which is a
102	# subdirectory of the current working directory,
103	# -s TEST changed to -s WRITE_PERMIT or -s WP,
104	# adapted for RIAM (neck)
105	# bugfix for cycle number of output file (extout)
106	# all hpmuk-related code removed
107	# 14/02/07 - Siggi - dvrp support for neck added
108	# 28/02/07 - Siggi - empty lines in configuration file are accepted
109	# mrun_path replaced by PALM_BIN,
110	# all machines are calling interpret_config.x
111	# 14/03/07 - Siggi - fimm admitted, revision number added to terminal
112	# output
113	# 16/03/07 - Siggi - adjustments for lctit
114	# 29/03/07 - Siggi - global revision transfered to batch job by new
115	# option -G
116	# 30/03/07 - Siggi - compilation "by hand" removed, cpp-directives/options
117	# + netcdf/dvrp-options are read from configuration
118	# file, host identifier (local_host) is read from
119	# config file, code related to ftp filetransfer
120	# removed (incl. option -f)
121	# 19/06/07 - Siggi - time limit for cdata jobs increased
122	# 25/07/07 - Siggi - two sets of executables can be started on lcmuk,
123	# if new option -Y (coupling) is given,
124	# output of executables to aout_output removed,
125	# messages are immediately written to stdout instead
126	# 03/08/07 - Marcus - add XOPT="-X $numprocs" for lcfimm
127	# 09/08/07 - Marcus - workaround on lcfimm to propagate environment
128	# variables out to the nodes in coupled mode -disabled-
129	# 13/08/07 - Marcus - start local restart jobs per ssh on lcfimm
130	# 28/08/07 - Marcus - completely remove workaround on lcfimm to propagate
131	# environment variables out to the nodes in coupled mode
132	# 15/10/07 - Siggi - Preliminary adjustments for lctit, based on Jin's
133	# suggestions
134	# 19/10/07 - Marcus - further adjustments for lctit: add new optional
135	# argument -g group_number, admit all sla* node_usage
136	# queues
137
138
139	# VARIABLENVEREINBARUNGEN + DEFAULTWERTE
140
141	set +o allexport # SICHERHEITSHALBER UNTERBINDEN, DA SONST EVTL. STAGEOUT
142	# NICHT LAUEFT (TOO MANY ARGUMENTS - PROBLEM)
143	set +o noclobber # EXISTIERENDE DATEIEN DUERFEN UEBERSCHRIEBEN WERDEN
144
145	AddFilenames=""
146	additional_conditions=""
147	add_source_path=""
148	afname=""
149	archive_save=true
150	archive_system=none
151	compiler_name=""
152	cond1=""
153	cond2=""
154	config_file=.mrun.config
155	cpp_opts=""
156	cpp_options=""
157	cpumax=0
158	cpurest=0
159	delete_temporary_catalog=true
160	do_batch=false
161	do_compile=true
162	do_remote=false
163	do_stagein=true
164	do_stageout=true
165	do_trace=false
166	email_notification=""
167	exclude=""
168	executable=""
169	execution_error=false
170	fimm=false
171	fname=test
172	fromhost=""
173	global_revision=""
174	group_number=none
175	host=""
176	host_file=""
177	hp=""
178	ignore_archive_error=false
179	input_list=""
180	interpreted_config_file=""
181	job_on_file=""
182	keep_data_from_previous_run=false
183	localhost_realname=$(hostname)
184	local_compile=false
185	locat=normal
186	mainprog=""
187	makefile=""
188	mc=$0
189	while [[ $(echo $mc \| grep -c "/") != 0 ]]
190	do
191	mc=`echo $mc \| cut -f2- -d"/"`
192	done
193	module_files=""
194	mrun_script_name=$mc
195	netcdf_inc=""
196	netcdf_lib=""
197	netcdf_support=false
198	node_usage=default
199	numprocs=""
200	OOPT=""
201	openmp=false
202	output_list=""
203	package_list=""
204	punkte="..........................................................."
205	queue=none
206	read_from_config=""
207	restart_run=false
208	return_addres=$(nslookup `hostname` 2>&1 \| grep "Address:" \| tail -1 \| awk '{print $2}')
209	if [[ $return_addres = 130.75.105.158 ]]
210	then
211	return_addres=172.20.25.41
212	echo "+++ WARNING: return_addres changed to $return_addres !!!!!"
213	fi
214	# if [[ $return_addres = 210.117.65.1 ]]
215	# if [[ $(nslookup `hostname` 2>&1 \| grep -c 210.117.65.1) = 1 ]]
216	# then
217	# [[ $localhost_realname = gfdl3.yonsei.ac.kr ]] && return_addres=165.132.26.56
218	# fi
219	return_password=""
220	return_username=$LOGNAME
221	remotecall=false
222	remote_username=""
223	run_coupled_model=false
224	run_mode=""
225	scirocco=false
226	store_on_archive_system=true
227	striche=" ----------------------------------------------------------------------------"
228	silent=false
229	source_list=""
230	source_path=SOURCE
231	tasks_per_node=""
232	threads_per_task=1
233	tmpcreate=false
234	tmp_data_catalog=""
235	transfer_problems=false
236	usern=$LOGNAME
237	working_directory=`pwd`
238	TOPT=""
239	XOPT=""
240	zeit=$( date \| cut -c 12-19 )
241
242	typeset -i iec=0 iic=0 iin=0 ioc=0 iout=0 memory=0 stagein_anz=0 stageout_anz=0
243	typeset -i cputime i ii iii icycle inode ival jobges jobsek maxcycle minuten nodes pes sekunden tp1
244
245	typeset -R30 calltime
246	typeset -L20 spalte1
247	typeset -L40 spalte2
248	typeset -L60 spalte3
249	typeset -L35 string1=`date`
250	typeset -L12 string2=$usern
251	typeset -L12 string3=$localhost_realname
252	typeset -L12 string4
253	typeset -L12 string5
254	typeset -L30 version="MRUN 2.0 Rev$Rev: 123 $"
255
256
257
258	# EINZELNE VARIABLE FUER HAUPTPROGRAMM EXPORTIEREN
259	export cpurest fname host localhost return_addres return_username remotecall tasks_per_node
260
261	# FOLGENDE VARIABLEN MUESSEN FUER DIE INTERPRETATION DER KONFIGURATIONSDATEI
262	# EXPORTIERT WERDEN
263	export afname config_file cpp_opts cpumax do_batch do_trace fname fromhost
264	export input_list memory numprocs output_list queue run_mode
265
266
267
268	# FEHLERBEHANDLUNG
269	# BEI EXIT:
270	trap 'rm -rf $working_directory/tmp_mrun
271	if [[ $locat != localhost ]]
272	then
273	# if [[ ! -f ${mrun_path}/statistik/mrun_statistik ]]
274	# then
275	# cat > ${mrun_path}/statistik/mrun_statistik << %STATEND%
276	#MRUN-calls on $localhost
277	#
278	#date and time user localhost remotehost termination mrun-command
279	#--------------------------------------------------------------------------------------------------------------------
280	#%STATEND%
281	# chmod 666 ${mrun_path}/statistik/mrun_statistik
282	# fi
283	#
284	# # EINTRAG IN DIE STATISTIK-DATEI
285	# string4=$host
286	# string5=$locat
287	# if [[ "$job_on_file" = "" && $locat != control_c && $locat != user_abort ]]
288	# then
289	# if [[ $do_batch = true ]]
290	# then
291	# printf "$string1$string2$string3$string4$string5$mrun_com \n" >> ${mrun_path}/statistik/mrun_statistik
292	# else
293	# printf "$string1$string2$string3$string4$string5$mc \n" >> ${mrun_path}/statistik/mrun_statistik
294	# fi
295	# fi
296	echo " " > /dev/null
297	fi
298
299	if [[ $locat != normal && $locat != control_c && $locat != local_compile ]]
300	then
301
302	# EVENTUELLE ERROR-KOMMANDOS ABARBEITEN
303	(( i = 0 ))
304	while (( i < iec ))
305	do
306	(( i = i + 1 ))
307	printf "\n *** Execution of ERROR-command:\n"
308	printf " >>> ${err_command[$i]}\n"
309	eval ${err_command[$i]}
310	done
311	if [[ -n $interpreted_config_file ]] then
312	rm -rf $interpreted_config_file
313	fi
314	if [[ -n .mrun_environment ]] then
315	rm -rf .mrun_environment
316	fi
317	if [[ $tmpcreate = true ]]
318	then
319	printf "\n *** Contents of \"$TEMPDIR\":\n"
320	ls -al; cd
321	[[ $delete_temporary_catalog = true ]] && rm -rf $TEMPDIR
322	fi
323	if [[ -f ~/job_queue/JOBINFO.$QSUB_REQID ]]
324	then
325	rm -rf ~/job_queue/JOBINFO.$QSUB_REQID
326	fi
327	printf "\n\n+++ MRUN killed \n\n"
328	elif [[ $locat != control_c ]]
329	then
330	printf "\n\n --> all actions finished\n\n"
331	printf " Bye, bye $usern !!\n\n"
332	fi' exit
333
334
335	# BEI TERMINAL-BREAK:
336	trap 'rm -rf $working_directory/tmp_mrun
337	[[ $tmpcreate = true ]] && (cd; rm -rf $TEMPDIR)
338	if [[ -f ~/job_queue/JOBINFO.$QSUB_REQID ]]
339	then
340	rm -rf ~/job_queue/JOBINFO.$QSUB_REQID
341	fi
342	printf "\n+++ MRUN killed by \"^C\" \n\n"
343	locat=control_c
344	exit
345	' 2
346
347
348	# CHECK IF THE PATH FOR THE PALM BINARIES (SCRIPTS+UTILITY-PROGRAMS) HAS
349	# BEEN SET
350	if [[ "$PALM_BIN" = "" ]]
351	then
352	printf "\n +++ environment variable PALM_BIN has not been set"
353	printf "\n please set it to the directory where the PALM scripts are located"
354	locat=palm_bin; exit
355	fi
356
357
358
359	# SHELLSCRIPT-OPTIONEN EINLESEN UND KOMMANDO NEU ZUSAMMENSETZEN, FALLS ES
360	# FUER FOLGEJOBS BENOETIGT WIRD
361	while getopts :a:AbBc:Cd:D:Fg:G:h:H:i:IkK:m:M:n:o:Op:P:q:r:R:s:St:T:u:U:vxX:Y option
362	do
363	case $option in
364	(a) afname=$OPTARG;;
365	(A) store_on_archive_system=false; mc="$mc -A";;
366	(b) do_batch=true; mc="$mc -b";;
367	(B) delete_temporary_catalog=false; mc="$mc -B";;
368	(c) config_file=$OPTARG; mc="$mc -c$OPTARG";;
369	(C) restart_run=true; mc="$mc -C";;
370	(d) fname=$OPTARG; mc="$mc -d$OPTARG";;
371	(D) cpp_opts="$cpp_opts $OPTARG"; mc="$mc -D$OPTARG";;
372	(F) job_on_file="-D"; mc="$mc -F";;
373	(g) group_number=$OPTARG; mc="$mc -g$OPTARG";;
374	(G) global_revision=$OPTARG; mc="$mc -G'$OPTARG'";;
375	(h) host=$OPTARG; mc="$mc -h$OPTARG";;
376	(H) fromhost=$OPTARG; mc="$mc -H$OPTARG";;
377	(i) input_list=$OPTARG; mc="$mc -i'$OPTARG'";;
378	(I) ignore_archive_error=true; mc="$mc -I";;
379	(k) keep_data_from_previous_run=true; mc="$mc -k";;
380	(K) additional_conditions="$OPTARG"; mc="$mc -K$OPTARG";;
381	(m) memory=$OPTARG; mc="$mc -m$OPTARG";;
382	(M) makefile=$OPTARG; mc="$mc -M$OPTARG";;
383	(n) node_usage=$OPTARG; mc="$mc -n$OPTARG";;
384	(o) output_list=$OPTARG; mc="$mc -o'$OPTARG'";;
385	(O) use_openmp=true; mc="$mc -O";;
386	(p) package_list=$OPTARG; mc="$mc -p'$OPTARG'";;
387	(P) return_password=$OPTARG; mc="$mc -P$OPTARG";;
388	(q) queue=$OPTARG; mc="$mc -q$OPTARG";;
389	(r) run_mode=$OPTARG; mc="$mc -r'$OPTARG'";;
390	(R) remotecall=true;return_addres=$OPTARG; mc="$mc -R$OPTARG";;
391	(s) source_list=$OPTARG; mc="$mc -s'$OPTARG'";;
392	(S) read_from_config=false; mc="$mc -S";;
393	(t) cpumax=$OPTARG; mc="$mc -t$OPTARG";;
394	(T) tasks_per_node=$OPTARG; mc="$mc -T$OPTARG";;
395	(u) remote_username=$OPTARG; mc="$mc -u$OPTARG";;
396	(U) return_username=$OPTARG; mc="$mc -U$OPTARG";;
397	(v) silent=true; mc="$mc -v";;
398	(x) do_trace=true;set -x; mc="$mc -x";;
399	(X) numprocs=$OPTARG; mc="$mc -X$OPTARG";;
400	(Y) run_coupled_model=true; mc="$mc -Y";;
401	(\?) printf "\n +++ unknown option $OPTARG \n"
402	printf "\n --> type \"$0 ?\" for available options \n"
403	locat=parameter;exit;;
404	esac
405	done
406
407
408	# EVTL. POSITIONSPARAMETER EINLESEN
409	# ZUR ZEIT GIBT ES NUR DEN PARAMETER ? (=KURZINFO)
410	shift OPTIND-1
411
412
413	# KURZE AUFRUFBESCHREIBUNG WIRD HIER AUSGEGEBEN
414	if [[ "$1" = "?" ]]
415	then
416	(printf "\n *** mrun can be called as follows:\n"
417	printf "\n $mrun_script_name -b -c.. -d.. -D.. -f.. -F -h.. -i.. -I -K.. -m.. -o.. -p.. -r.. -R -s.. -t.. -T.. -v -x -X.. <modus>\n"
418	printf "\n Description of available options:\n"
419	printf "\n Option Description Default-Value"
420	printf "\n -a base name of input files equiv. -d"
421	printf "\n -A no archiving when using file-attribute fl"
422	printf "\n -b batch-job on local machine ---"
423	printf "\n -B do not delete temporary directory at end ---"
424	printf "\n -c configuration file .mrun.config"
425	printf "\n -d base name of files attached to program test"
426	printf "\n -D preprocessor(cpp)-directives \"\" "
427	printf "\n -F create remote job file only ---"
428	printf "\n -h execution host $localhost_realname"
429	printf "\n -i INPUT control list \"\" "
430	printf "\n -I archiving errors of previous batch-jobs"
431	printf "\n will be ignored"
432	printf "\n -k keep data from previous run"
433	printf "\n -K additional conditions for controling"
434	printf "\n usage of conditional code and"
435	printf "\n env-variables in configuration file \"\" "
436	printf "\n -m memory demand in MB (batch-jobs) 0 MB"
437	printf "\n -M Makefile name Makefile"
438	printf "\n -n node usage (shared/not_shared) depending on -h"
439	printf "\n -o OUTPUT control list \"\" "
440	printf "\n -O use OpenMP ---"
441	printf "\n -p software package list \"\" "
442	printf "\n -q queue \"$queue\" "
443	printf "\n -r run control list (combines -i -o) \"\" "
444	printf "\n -s filenames of routines to be compiled \"\" "
445	printf "\n must end with .f, .f90, .F, or .c !"
446	printf "\n use \"..\" for more than one file and wildcards"
447	printf "\n -s TEST compiles all files with w-permit"
448	printf "\n -S config file interpreted by shellscript ---"
449	printf "\n -t allowed cpu-time in seconds (batch) 0"
450	printf "\n -T tasks per node depending on -h"
451	printf "\n -u username on remote machine \"\" "
452	printf "\n -v no prompt for confirmation ---"
453	printf "\n -x tracing of mrun for debug purposes ---"
454	printf "\n -X # of processors (on parallel machines) 1"
455	printf "\n -Y run coupled model ---"
456	printf "\n "
457	printf "\n Possible values of positional parameter <modus>:"
458	printf "\n \"?\" - this outline \n\n") \| more
459	exit
460	elif [[ "$1" != "" ]]
461	then
462	printf "\n +++ positional parameter $1 unknown \n"
463	locat=parameter; exit
464	fi
465
466
467
468	# KURZE STARTMELDUNG
469	printf "\n*** $version "
470	printf "\n will be executed. Please wait ..."
471
472
473
474	# PRUEFEN, OB KONFIGURATIONS-DATEI VORHANDEN
475	if [[ ! -f $config_file ]]
476	then
477	printf "\n\n +++ configuration file: "
478	printf "\n $config_file"
479	printf "\n does not exist"
480	locat=connect; exit
481	fi
482
483
484	# HOST-IDENTIFIER (local_host) AUS KONFIGURATIONSDATEI BESTIMMEN
485	line=""
486	grep "%host_identifier" $config_file > tmp_mrun
487	while read line
488	do
489	if [[ "$line" != "" \|\| $(echo $line \| cut -c1) != "#" ]]
490	then
491	HOSTNAME=`echo $line \| cut -d" " -s -f2`
492	host_identifier=`echo $line \| cut -d" " -s -f3`
493	if [[ $localhost_realname = $HOSTNAME ]]
494	then
495	localhost=$host_identifier
496	break
497	fi
498	fi
499	done < tmp_mrun
500
501	if [[ "$localhost" = "" ]]
502	then
503	printf "\n\n +++ no host identifier found in configuration file \"$config_file\""
504	printf "\n for local host \"$localhost_realname\"."
505	printf "\n Please add line"
506	printf "\n \"\%host_identifier $localhost_realname <identifier>\""
507	printf "\n to the configuration file."
508	locat=localhost; exit
509	fi
510
511
512
513	# HOSTSPEZIFISCHE VARIABLEN SETZEN
514	case $localhost_realname in
515	(breg-en0\|berni-en0) archive_system=tivoli;;
516	(cs*) archive_system=ut;;
517	(fimm.bccs.uib.no) fimm=true;;
518	(gate\|n-sx) PATH=$PALM_BIN:$PATH:/usr/bin/nqsII;;
519	(hreg-en0\|hanni-en0) archive_system=tivoli;;
520	(scirocco) scirocco=true;;
521	esac
522
523
524
525	# BASISNAME DER INPUT-DATEIEN GLEICH ALLGEMEINEM BASISNAMEN SETZEN,
526	# WENN NICHT VOM BENUTZER ANDERS BESTIMMT
527	[[ "$afname" = "" ]] && afname=$fname
528
529
530	# EVTL. RUN-MODUS DEN I/O-LISTEN HINZUFUEGEN
531	if [[ "$run_mode" != "" ]]
532	then
533	input_list="$input_list $run_mode"
534	output_list="$output_list $run_mode"
535	fi
536
537
538	# RECHNERNAMEN ABSPEICHERN, VON DEM AUS JOB GESTARTET WIRD,
539	# ALLERDINGS NUR DANN, WENN NICHT PER OPTION -H BEREITS EIN WERT
540	# ZUGEWIESEN WURDE (MRUN MACHT DIES IMMER, WENN ES SELBST BATCH-JOBS
541	# STARTET)
542	if [[ "$fromhost" = "" ]]
543	then
544	fromhost=$localhost
545	fi
546
547
548	# PRUEFEN, OB MRUN NUR TESTWEISE AUF DER LOKALEN MASCHINE KOMPILIEREN SOLL
549	if [[ "$source_list" = LOCAL_COMPILE_TEST ]]
550	then
551	source_list=TEST
552	local_compile=true
553	host=$localhost
554	fi
555
556
557	# PRUEFEN, OB AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL
558	# WERT VON do_remote WIRD FUER DATEIVERBINDUNGEN BENOETIGT.
559	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
560	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
561	if [[ -n $host && "$host" != $localhost ]]
562	then
563	do_batch=true
564	do_remote=true
565	case $host in
566	(ibm\|ibmb\|ibmh\|ibms\|ibmy\|nech\|neck\|lctit\|unics) true;;
567	(*) printf "\n"
568	printf "\n +++ sorry: execution of batch jobs on remote host \"$host\""
569	printf "\n is not available"
570	locat=nqs; (( iec = 0 )); exit;;
571	esac
572	else
573	host=$localhost
574	fi
575
576
577	# ZUSATZBEDINGUNGEN (OPTION -K) AUSWERTEN
578	if [[ -n $additional_conditions ]]
579	then
580	# echo $additional_conditions \| cut -d" " -f1-3 \| read cond1 cond2 dummy
581	cond1=`echo $additional_conditions \| cut -d" " -f1`
582	cond2=`echo $additional_conditions \| cut -d" " -s -f2`
583	dummy=`echo $additional_conditions \| cut -d" " -s -f3`
584	if [[ -n $dummy ]]
585	then
586	printf "\n +++ more than 2 additional conditions given for Option \"-K\""
587	locat=options; exit
588	fi
589	fi
590
591
592	# PRUEFEN, OB EVTL. BEI VORHERGEHENDEM LAUF (KETTENJOB) EINE
593	# ARCHIVIERUNG FEHLGESCHLAGEN IST
594	if [[ -f ~/job_queue/ARCHIVE_ERROR_$fname ]]
595	then
596	if [[ $ignore_archive_error = false ]]
597	then
598	printf "\n +++ data archiving of previous run failed"
599	printf "\n see directory \~/job_queue on remote machine"
600	locat=archive; exit
601	else
602	printf "\n +++ warning: data archiving in a previous run failed"
603	printf "\n MRUN continues, trying to get backup copy"
604	fi
605	fi
606
607
608
609	# LESEN UND INTERPRETIEREN DER KONFIGURATIONS-DATEI VOM SHELLSCRIPT AUS
610	# VORUEBERGEHEND ZWINGEND AUF LINUX-RECHNERN
611	if [[ "$read_from_config" = false ]]
612	then
613
614	[[ $silent = false ]] && printf "\n Reading the configuration file... "
615	while read zeile
616	do
617	[[ $silent = false ]] && printf "."
618
619
620	# ZUERST EVENTUELL VORKOMMENDE ENVIRONMENT-VARIABLEN DURCH IHRE WERTE
621	# ERSETZEN
622	eval zeile=\"$zeile\"
623
624
625	# INTERPRETATION DER ZEILE
626	if [[ "$(echo $zeile)" = "" ]]
627	then
628	# LEERZEILE, KEINE AKTION
629	continue
630
631	elif [[ "$(echo $zeile \| cut -c1)" = "#" ]]
632	then
633
634	# ZEILE IST KOMMENTARZEILE
635	true
636
637	elif [[ "$(echo $zeile \| cut -c1)" = "%" ]]
638	then
639
640	# ZEILE DEFINIERT ENVIRONMENT-VARIABLE
641	zeile=$(echo $zeile \| cut -c2-)
642	# echo $zeile \| cut -d" " -f1-5 \| read var value for_host for_cond1 for_cond2
643	var=`echo $zeile \| cut -d" " -f1`
644	value=`echo $zeile \| cut -d" " -s -f2`
645	for_host=`echo $zeile \| cut -d" " -s -f3`
646	for_cond1=`echo $zeile \| cut -d" " -s -f4`
647	for_cond2=`echo $zeile \| cut -d" " -s -f5`
648
649	if [[ "$for_host" = "" \|\| ( "$for_host" = $host && "$for_cond1" = "$cond1" && "$for_cond2" = "$cond2" ) \|\| $(echo "$input_list$output_list"\|grep -c "$for_host") != 0 ]]
650	then
651
652	# BEI COMPILER- CPP- ODER LINKEROPTIONEN EVTL ":" DURCH " "
653	# ERSETZEN. "::" WIRD DURCH ":" ERSETZT.
654	value=`echo $value \| sed 's/::/%DUM%/g' \| sed 's/:/ /g' \| sed 's/%DUM%/:/g'`
655
656
657	# ENVIRONMENT-VARIABLE WIRD WERT AUS KONFIGURATIONSDATEI
658	# ZUGEWIESEN, WENN SIE SELBST NOCH KEINEN WERT UEBER DIE
659	# ENTSPRECHENDE SCRIPT-OPTION ERHALTEN HAT. SOLCHE
660	# VARIABLEN HAETTEN DANN DEN WERT "" ODER IM INTEGER-FALL DEN
661	# WERT 0. ALLGEMEINE REGEL ALSO: SCRIPT-OPTION GEHT UEBER
662	# KONFIGURATIONSDATEI
663	if [[ "$(eval echo \$$var)" = "" \|\| "$(eval echo \$$var)" = "0" ]]
664	then
665	eval $var=\$value
666
667	# EVTL. BILDSCHIRMAUSGABEN DER ENVIRONMENT-VARIABLEN
668	if [[ $do_trace = true ]]
669	then
670	printf "\n*** ENVIRONMENT-VARIABLE $var = $value"
671	fi
672	fi
673
674	# WENN ENVIRONMENT-VARIABLE HOST VEREINBART, DANN SOFORT AUSWERTEN
675	# WERT VON do-remote WIRD BEI DATEIVERBINDUNGEN BENOETIGT
676	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
677	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
678	if [[ $var = host ]]
679	then
680	if [[ -n $host && "$host" != $localhost ]]
681	then
682	do_batch=true
683	do_remote=true
684	case $host in
685	(ibm\|ibms\|ibmy\|lctit\|nech\|neck\|unics) true;;
686	(*) printf "\n +++ sorry: execution of batch jobs on remote host \"$host\""
687	printf "\n is not available"
688	locat=nqs; exit;;
689	esac
690	else
691	host=$localhost
692	fi
693	fi
694
695	# VOM BENUTZER DEFINIERTE ENVIRONMENT VARIABLEN MUESSEN PRINZIPIELL
696	# EXPORTIERT WERDEN, DA SIE VIELLEICHT IN WEITER UNTEN AUFZURUFEN-
697	# DEN PROGRAMMEN BENOETIGT WERDEN
698	export $var
699	fi
700
701
702
703
704	elif [[ "$(echo $zeile \| cut -c1-3)" = "EC:" ]]
705	then
706
707	# ZEILE DEFINIERT ERROR-KOMMANDO
708	(( iec = iec + 1 ))
709	zeile=$(echo $zeile \| cut -c4-)
710	err_command[$iec]="$zeile"
711
712	elif [[ "$(echo $zeile \| cut -c1-3)" = "IC:" ]]
713	then
714
715	# ZEILE DEFINIERT INPUT-KOMMANDO
716	(( iic = iic + 1 ))
717	zeile=$(echo $zeile \| cut -c4-)
718	in_command[$iic]="$zeile"
719
720	elif [[ "$(echo $zeile \| cut -c1-3)" = "OC:" ]]
721	then
722
723	# ZEILE DEFINIERT OUTPUT-KOMMANDO
724	(( ioc = ioc + 1 ))
725	zeile=$(echo $zeile \| cut -c4-)
726	out_command[$ioc]="$zeile"
727
728	else
729
730	# ZEILE DEFINIERT DATEIVERBINDUNG. EINLESEN DER DATEIEIGENSCHAFTEN
731	# s2a: in/out - Feld
732	# s2b: loc - Feld (optional)
733	# s2c: tr/ar - Feld (optional)
734	# echo $zeile \| cut -d" " -f1-2 \| read s1 s2
735	s1=`echo $zeile \| cut -d" " -f1`
736	s2=`echo $zeile \| cut -d" " -s -f2`
737	s2a=$(echo $s2 \| cut -d":" -f1)
738	if [[ $(echo $s2 \| grep -c ":") = 0 ]]
739	then
740	s2b=""
741	s2c=""
742	else
743	# echo $s2 \| cut -d":" -f2-3 \| sed 's/:/ /g' \| read s2b s2c
744	s2b=`echo $s2 \| cut -d":" -f2 \| sed 's/:/ /g'`
745	s2c=`echo $s2 \| cut -d":" -s -f3 \| sed 's/:/ /g'`
746	fi
747	# echo $zeile \| cut -d" " -f3-6 \| read s3 s4 s5 s6
748	s3=`echo $zeile \| cut -d" " -f3`
749	s4=`echo $zeile \| cut -d" " -s -f4`
750	s5=`echo $zeile \| cut -d" " -s -f5`
751	s6=`echo $zeile \| cut -d" " -s -f6`
752
753
754	# ABSPEICHERN DER DATEIVERBINDUNG, FALLS IN INPUT- ODER OUTPUT-LIST
755	# VERMERKT. VARIABLE S3 KANN AUCH LISTE ENTHALTEN (FELDTRENNER ":")
756	# DATEIVERBINDUNG WIRD DANN NICHT ABGESPEICHERT UND GEPRUEFT, WENN
757	# PROGRAMMLAUF AUF REMOTE-MASCHINE ERFOLGT UND DATEI NUR LOKAL VOR-
758	# HANDEN SEIN MUSS (D.H. s2b = loc)
759	IFSALT="$IFS"; IFS="$IFS:"
760	if [[ "$s2a" = in && ! ( $do_remote = true && ( "$s2b" = loc \|\| "$s2b" = locopt ) ) ]]
761	then
762	found=false
763	for actual in $input_list
764	do
765	for formal in $s3
766	do
767	[[ $actual = $formal \|\| "$formal" = "-" ]] && found=true
768	done
769	done
770	if [[ $found = true ]]
771	then
772	(( iin = iin + 1 ))
773	localin[$iin]=$s1; transin[$iin]=$s2b; actionin[$iin]=$s2c;
774	typein[$iin]=$s3; pathin[$iin]=$s4; endin[$iin]=$s5;
775	extin[$iin]=$s6
776	fi
777	elif [[ "$s2a" = out && ! ( $do_remote = true && "$s2b" = loc ) ]]
778	then
779	found=false
780	for actual in $output_list
781	do
782	for formal in $s3
783	do
784	[[ $actual = $formal \|\| "$formal" = "-" ]] && found=true
785	done
786	done
787	if [[ $found = true ]]
788	then
789	(( iout = iout + 1 ))
790	localout[$iout]=$s1; actionout[$iout]=$s2c; typeout[$iout]=$s3;
791	pathout[$iout]=$s4; endout[$iout]=$s5; extout[$iout]=$s6
792	fi
793	elif [[ "$s2a" != in && "$s2a" != out ]]
794	then
795	printf "\n +++ I/O-attribute in configuration file $config_file has the invalid"
796	printf "\n value \"$s2\". Only \"in\" and \"out\" are allowed!"
797	locat=connect; exit
798	fi
799	IFS="$IFSALT"
800	fi
801	done < $config_file
802
803	else
804
805
806	# INTERPRETATION DER KONFIGURATIONSDATEI MITTELS FORTRAN 90 - PROGRAMM
807	[[ $silent = false ]] && printf "..."
808	export cond1 cond2 config_file do_remote do_trace input_list localhost output_list
809	export interpreted_config_file=.icf.$RANDOM
810
811
812
813	# ENVIRONMENT-VARIABLEN FUER INTERPRET_CONFIG UEBER NAMELIST_DATEI ZUR
814	# VERFUEGUNG STELLEN
815	cat > .mrun_environment << %%END%%
816	&mrun_environment cond1 = '$cond1', cond2 = '$cond2',
817	config_file = '$config_file', do_remote = '$do_remote',
818	do_trace = '$do_trace', host = '$host',
819	input_list = '$input_list', icf = '$interpreted_config_file',
820	localhost = '$localhost', output_list = '$output_list' /
821
822	%%END%%
823
824	# WERTE VON MRUN-OPTIONEN SICHERN UND DAMIT GEGEBENENFALLS SPAETER DIE
825	# IN DER KONFIGURAIONSDATEI ANGEGEBENEN WERTE UEBERSTEUERN
826	mrun_memory=$memory
827	mrun_cpumax=$cpumax
828	mrun_numprocs=$numprocs
829
830	if [[ $localhost_realname = "gate" ]]
831	then
832	interpret_config_gate.x
833	else
834	interpret_config.x
835	fi
836	rm .mrun_environment
837
838
839	# AUSFUEHRUNG DER GENERIERTEN SHELL-KOMMANDOS IN DIESER SHELL
840	chmod u+x $interpreted_config_file
841	export PATH=$PATH:.
842	. $interpreted_config_file
843	rm $interpreted_config_file
844
845
846	# OPTIONSWERTE UEBERSTEUERN KONFIGURATIONSDATEI
847	[[ $mrun_memory != 0 ]] && memory=$mrun_memory
848	[[ $mrun_cpumax != 0 ]] && cpumax=$mrun_cpumax
849	[[ "$mrun_numprocs" != "" ]] && numprocs=$mrun_numprocs
850
851	fi
852
853
854	# QUELLTEXTVERZEICHNIS AUF LOKALER MASCHINE AUS KONFIGURATIONSDATEI
855	# BESTIMMEN (WUERDE SONST EVTL. DAS VERZEICHNIS DES JEWEILS UNTER -h
856	# ANGEGEBENEN REMOTE-RECHNERS SEIN)
857	# BEI BATCH-JOBS SIND DIE ZU UEBERSETZENDEN PROGRAMMTEILE SCHON KOMPLETT
858	if [[ "$SOURCES_COMPLETE" = "" ]]
859	then
860
861	# ZUERST PRUEFEN, OB EIN GLOBALER QUELLTEXTPFAD FUER ALLE RECHNER
862	# VEREINBART WURDE
863	source_path=""
864	line=""
865	grep "%source_path" $config_file > tmp_mrun
866	while read line
867	do
868	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
869	then
870	if [[ "$(echo $line \| cut -d" " -f3)" = "" ]]
871	then
872	global_source_path=`echo $line \| cut -d" " -f2`
873	fi
874	fi
875	done < tmp_mrun
876
877	line=""
878	found=false
879	grep " $localhost" $config_file \| grep "%source_path" > tmp_mrun
880	while read line
881	do
882	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
883	then
884	if [[ $found = true ]]
885	then
886	printf "\n\n +++ more than one source path found in configuration file"
887	printf "\n for local host \"$localhost\" "
888	locat=source_path; exit
889	fi
890	source_path=`echo $line \| cut -d" " -f2`
891	found=true
892	fi
893	done < tmp_mrun
894	rm tmp_mrun
895
896	if [[ "$source_path" = "" ]]
897	then
898	if [[ "$global_source_path" != "" ]]
899	then
900	source_path=$global_source_path
901	else
902	printf "\n\n +++ no source path found in configuration file"
903	printf "\n for local host \"$localhost\" "
904	locat=source_path; exit
905	fi
906	fi
907	eval source_path=$source_path
908
909	if [[ ! -d $source_path ]]
910	then
911	printf "\n\n +++ source path \"$source_path\" on local host"
912	printf "\n \"$localhost\" does not exist"
913	locat=source_path; exit
914	fi
915
916	fi
917
918
919	# GLOBALE REVISIONSNUMMER ERMITTELN (FORTSETZUNGSLAEUFEN WIRD DIESE
920	# DURCH OPTION -G MITGETEILT)
921	if [[ "$global_revision" = "" ]]
922	then
923	global_revision=`svnversion $source_path 2>/dev/null`
924	global_revision="Rev: $global_revision"
925	fi
926
927
928	# NOCHMAL PRUEFEN, OB AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL
929	# (HOST KANN IN KONFIGURATIONSDATEI ANDERS FESTGELEGT WORDEN SEIN)
930	# WERT VON do_remote WIRD FUER DATEIVERBINDUNGEN BENOETIGT.
931	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
932	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
933	if [[ -n $host && "$host" != $localhost ]]
934	then
935	do_batch=true
936	do_remote=true
937	case $host in
938	(ibm\|ibmb\|ibmh\|ibms\|ibmy\|lctit\|nech\|neck\|unics) true;;
939	(*) printf "\n"
940	printf "\n +++ sorry: execution of batch jobs on remote host \"$host\""
941	printf "\n is not available"
942	locat=nqs; (( iec = 0 )); exit;;
943	esac
944	else
945	host=$localhost
946	fi
947
948
949	# PRUEFUNG EINIGER PROZESSORZAHLANGABEN BEI RECHNUNGEN AUF PARALLELRECHNERN
950	if [[ "$cond1" = parallel \|\| "$cond2" = parallel ]]
951	then
952
953	# PRUEFEN, OB DIE ANZAHL DER ZU VERWENDENDEN PES ANGEGEBEN WURDE
954	if [[ ! -n $numprocs ]]
955	then
956	printf "\n"
957	printf "\n +++ option \"-K parallel\" requires additional specification"
958	printf "\n of the number of processors to be used by"
959	printf "\n mrun-option \"-X\" or by environment-variable"
960	printf "\n \"numprocs\" in the configuration file"
961	locat=numprocs; (( iec = 0 )); exit
962	fi
963
964	# PRUEFEN, OB DIE PROZESSORANZAHL PRO KNOTEN ANGEGEBEN WURDE (GGF.
965	# DEFAULT-WERT SETZEN) UND OB SIE EIN GANZZAHLIGER TEILER DER
966	# GESAMTPROZESSORANZAHL IST
967	if [[ $host = nech \|\| $host = neck \|\| $host = ibmh \|\| $host = ibmb \|\| $host = ibms ]]
968	then
969	[[ "$tasks_per_node" = "" ]] && tasks_per_node=6
970	(( ival = $tasks_per_node ))
971	(( pes = numprocs ))
972	# if [[ $(echo $package_list \| grep -c dvrp_graphics+1PE) = 1 ]]
973	# then
974	# (( pes = pes - 1 ))
975	# fi
976	(( ii = pes / ival ))
977	if (( pes - ii * ival > 0 ))
978	then
979	printf "\n"
980	printf "\n +++ tasks per node (option \"-T\") must be an integral"
981	printf "\n divisor of the total number of processors (option \"-X\")"
982	printf "\n values of this mrun-call: \"-T $tasks_per_node\" \"-X $numprocs\""
983	locat=tasks_per_node; (( iec = 0 )); exit
984	fi
985	fi
986
987	# IBMY HAT NUR EINEN KNOTEN
988	if [[ $host = ibmy ]]
989	then
990	if [[ "$tasks_per_node" != "" && "$tasks_per_node" != "$numprocs" ]]
991	then
992	printf "\n"
993	printf "\n +++ on ibmy, tasks per node (option \"-T\") must be equal to the"
994	printf "\n total number of processors (option \"-X\")"
995	printf "\n values of this mrun-call: \"-T $tasks_per_node\" \"-X $numprocs\""
996	locat=tasks_per_node; (( iec = 0 )); exit
997	fi
998	fi
999
1000	# FALLS OPENMP PARALLELISIERUNG VERWENDET WERDEN SOLL, ANZAHL VON THREADS
1001	# SETZEN UND ZAHL DER TASKS PRO KNOTEN AUF 1 SETZEN
1002	if [[ $use_openmp = true ]]
1003	then
1004	threads_per_task=$tasks_per_node
1005	tasks_per_node=1
1006	fi
1007	OOPT="-O $threads_per_task"
1008	TOPT="-T $tasks_per_node"
1009
1010	# GESAMTZAHL DER KNOTEN BESTIMMEN
1011	if [[ "$tasks_per_node" != "" ]]
1012	then
1013	(( nodes = numprocs / ( tasks_per_node * threads_per_task ) ))
1014	fi
1015
1016	# PRUEFEN, OB NODE USAGE EINEN ERLAUBTEN WERT HAT BZW. DEN DEFAULT
1017	# SETZEN
1018	if [[ $node_usage = default ]]
1019	then
1020	if [[ $host = ibms ]]
1021	then
1022	node_usage=shared
1023	elif [[ $host = lctit ]]
1024	then
1025	node_usage=sla3
1026	else
1027	node_usage=not_shared
1028	fi
1029	fi
1030	if [[ $node_usage != shared && $node_usage != not_shared && "$(echo $node_usage \| cut -c1-3)" != "sla" ]]
1031	then
1032	printf "\n"
1033	printf "\n +++ node usage (option \"-n\") is only allowed to be set"
1034	printf "\n \"shared\" or \"not_shared\""
1035	locat=tasks_per_node; (( iec = 0 )); exit
1036	fi
1037
1038	fi
1039
1040	# PRUEFEN, OB HOSTFILE EXISTIERT
1041	if [[ -n $hostfile ]]
1042	then
1043	if [[ ! -f $hostfile ]]
1044	then
1045	printf "\n"
1046	printf "\n +++ hostfile \"$hostfile\" does not exist"
1047	locat=hostfile; exit
1048	fi
1049	fi
1050
1051	# PRUEFEN, OB RHOSTS DATEI EXISTIERT. GEGEBENENFALLS ANLEGEN BZW. ERWEITERN
1052	if [[ $host = ibmy && $do_remote = false ]]
1053	then
1054	if [[ ! -f $HOME/.rhosts ]]
1055	then
1056	echo "gfdl5.yonsei.ac.kr" > $HOME/.rhosts
1057	printf "\n\n *** file:"
1058	printf "\n $HOME/.rhosts"
1059	printf "\n was created\n"
1060	fi
1061	if [[ $(grep -c gfdl5.yonsei.ac.kr $HOME/.rhosts) = 0 ]]
1062	then
1063	echo "gfdl5.yonsei.ac.kr" >> $HOME/.rhosts
1064	printf "\n\n *** file:"
1065	printf "\n $HOME/.rhosts"
1066	printf "\n was extended by the name of the current host\n"
1067	fi
1068	fi
1069
1070
1071
1072	# FALLS NICHT VORGEGEBEN, DEFAULT-QUEUE AUF DER ZIELMASCHINE FESTLEGEN
1073	if [[ $queue = none ]]
1074	then
1075	case $host in
1076	(ibmb) if [[ $node_usage = shared ]]
1077	then
1078	queue=cshare
1079	else
1080	queue=csolo
1081	fi;;
1082	(ibmh) if [[ $node_usage = shared ]]
1083	then
1084	queue=cshare
1085	else
1086	queue=csolo
1087	fi;;
1088	(ibmy) queue=parallel;;
1089	(lctit) queue=;;
1090	(nech) queue=none;;
1091	(neck) queue=P;;
1092	(unics) queue=unics;;
1093	esac
1094	fi
1095
1096
1097	# VOLLSTAENDIGE DATEINAMEN DER INPUT-FILES BILDEN,
1098	# INPUT-DATEIEN AUF VORHANDENSEIN PRUEFEN UND EVTL. HOECHSTE ZYKLUSNUMMER
1099	# ERMITTELN
1100	(( i = 0 ))
1101	while (( i < iin ))
1102	do
1103	(( i = i + 1 ))
1104	(( maxcycle = 0 ))
1105
1106	# NAMENSBILDUNG (EVTL. IST FESTER DATEINAME VORGEGEBEN)
1107	if [[ "${actionin[$i]}" = di ]]
1108	then
1109	remotepathin[$i]=${pathin[$i]}/${endin[$i]} # REMOTE-PFAD ERST AUF
1110	# REM-MASCHINE AUSWERTEN
1111	eval filename=${pathin[$i]}/${endin[$i]}
1112	else
1113	remotepathin[$i]=${pathin[$i]}/${afname}${endin[$i]} # REMOTE-PFAD ERST AUF
1114	# REM-MASCHINE AUSWERTEN
1115	eval filename=${pathin[$i]}/${afname}${endin[$i]}
1116	fi
1117
1118	# PRUEFEN AUF VORHANDENSEIN
1119	if [[ $(ls $filename* 2>&1 \| grep -c "not found") = 1 \|\| \
1120	$(ls $filename* 2>&1 \| grep -c "No such file") = 1 \|\| \
1121	$(ls $filename* 2>&1 \| grep -c "does not exist") = 1 ]]
1122	then
1123	# DATEIEN MIT EXTENSION (Z.B. NC) MUESSEN NICHT ZWINGEND VORHANDEN
1124	# SEIN, DESHALB IN SOLCHEN FAELLEN KEIN ABBRUCH. DIES IST NUR EINE
1125	# VORUEBERGEHENDE LOESUNG (OKT 05). NICHT ZWINGEND BENOETIGTE
1126	# EINGABEDATEIEN SOLLTEN EINE SPEZIELLE OPTION IN DER DATEI-
1127	# VERBINDUNGSANWEISUNG BEKOMMEN (Z.B. inopt?)
1128	if [[ "${transin[$i]}" != "locopt" ]]
1129	then
1130	printf "\n\n +++ INPUT-file: "
1131	if [[ "${extin[$i]}" = "" ]]
1132	then
1133	printf "\n $filename"
1134	else
1135	printf "\n $filename.${extin[$i]}"
1136	fi
1137	printf "\n does not exist\n"
1138	locat=input; exit
1139	else
1140	transin[$i]="unavailable"
1141	fi
1142	else
1143
1144	# ZYKLUSNUMMER FESTSTELLEN
1145	ls -1 -d $filename > filelist 2>/dev/null
1146	ls -1 -d $filename.* >> filelist 2>/dev/null
1147	while read zeile
1148	do
1149	cycle=$(print $zeile \| cut -f2 -d".")
1150	if [[ "$cycle" = "$zeile" ]]
1151	then
1152	(( icycle = 0 ))
1153	elif [[ "$cycle" = "${extin[$i]}" ]]
1154	then
1155	(( icycle = 0 ))
1156	else
1157	(( icycle = $cycle ))
1158	fi
1159	if (( icycle > maxcycle ))
1160	then
1161	(( maxcycle = icycle ))
1162	file_to_be_used=$zeile
1163	fi
1164	done <filelist
1165	rm filelist
1166
1167	# EVTL. ZYKLUSNUMMER AN DATEINAMEN ANFUEGEN
1168	if (( maxcycle > 0 ))
1169	then
1170	if [[ "${extin[$i]}" != " " && "${extin[$i]}" != "" ]]
1171	then
1172	filename=${filename}.$maxcycle.${extin[$i]}
1173	else
1174	filename=${filename}.$maxcycle
1175	fi
1176	else
1177	if [[ "${extin[$i]}" != " " && "${extin[$i]}" != "" ]]
1178	then
1179	filename=${filename}.${extin[$i]}
1180	fi
1181	fi
1182
1183	# DATEINAMEN OHNE PFAD ABER MIT ZYKLUSNUMMER ABSPEICHERN,
1184	# DA SPAETER BEI RUECKSPEICHERN VOM ARCHIVSYSTEM EVTL. BENOETIGT
1185	absnamein[$i]=$filename
1186	if (( maxcycle > 0 ))
1187	then
1188	if [[ "${actionin[$i]}" = di ]]
1189	then
1190	frelin[$i]=${endin[$i]}.$maxcycle
1191	else
1192	frelin[$i]=${afname}${endin[$i]}.$maxcycle
1193	fi
1194	else
1195	if [[ "${actionin[$i]}" = di ]]
1196	then
1197	frelin[$i]=${endin[$i]}
1198	else
1199	frelin[$i]=${afname}${endin[$i]}
1200	fi
1201	fi
1202
1203	fi
1204	done
1205
1206
1207	# VOLLSTAENDIGE DATEINAMEN (OHNE $ ODER ~) DER OUTPUT-FILES BILDEN,
1208	# OUTPUT-DATEIEN AUF VORHANDENSEIN PRUEFEN UND EVTL. HOECHSTE ZYKLUSNUMMER
1209	# ERMITTELN ODER, FALLS NICHT VORHANDEN, PRUEFEN, OB SIE SICH ANLEGEN LASSEN
1210	# DIESE AKTIONEN FINDEN NICHT STATT, WENN PROGRAMM AUF REMOTE-MASCHINE
1211	# RECHNET UND DATEI ANSCHLIESSEND TRANSFERIERT WERDEN SOLL!
1212	(( i = 0 ))
1213	while (( i < iout ))
1214	do
1215	(( i = i + 1 ))
1216	if [[ ! ( $fromhost != $localhost && ( "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = tra \|\| "${actionout[$i]}" = trpe ) ) ]]
1217	then
1218	if [[ "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = trpe ]]
1219	then
1220	actionout[$i]=""
1221	elif [[ "${actionout[$i]}" = tra ]]
1222	then
1223	actionout[$i]=a
1224	fi
1225	(( maxcycle = 0 ))
1226	eval filename=${pathout[$i]}/${fname}${endout[$i]}
1227	eval catalogname=${pathout[$i]}
1228	if [[ $(ls $filename* 2>&1 \| grep -c "not found") = 1 \|\| \
1229	$(ls $filename* 2>&1 \| grep -c "No such file") = 1 \|\| \
1230	$(ls $filename* 2>&1 \| grep -c "does not exist") = 1 ]]
1231	then
1232
1233	# OUTPUT-DATEI NICHT VORHANDEN. PRUEFEN, OB ANLEGEN MOEGLICH.
1234	if cat /dev/null > $filename
1235	then
1236	rm $filename
1237	else
1238
1239	# PRUEFEN, OB KATALOG VORHANDEN UND EVTL. DIESEN ANLEGEN
1240	if [[ ! -d $catalogname ]]
1241	then
1242	if mkdir -p $catalogname
1243	then
1244	printf "\n\n *** directory:"
1245	printf "\n $catalogname"
1246	printf "\n was created\n"
1247	else
1248	printf "\n\n +++ OUTPUT-file:"
1249	printf "\n $filename"
1250	printf "\n cannot be created, because directory does not exist"
1251	printf "\n and cannot be created either"
1252	printf "\n"
1253	locat=output ; exit
1254	fi 2>/dev/null
1255	else
1256	printf "\n\n +++ OUTPUT-file:"
1257	printf "\n $filename"
1258	printf "\n cannot be created, although directory exists"
1259	printf "\n"
1260	locat=output ; exit
1261	fi
1262	fi 2>/dev/null
1263	else
1264
1265	# ZYKLUSNUMMER FESTSTELLEN
1266	ls -1 -d $filename > filelist 2>/dev/null
1267	ls -1 -d $filename.* >> filelist 2>/dev/null
1268	while read zeile
1269	do
1270	cycle=$(print $zeile \| cut -f2 -d".")
1271	if [[ "$cycle" = "$zeile" \|\| "$cycle" = ${extout[$i]} ]]
1272	then
1273	(( icycle = 1 ))
1274	else
1275	(( icycle = $cycle + 1 ))
1276	fi
1277	if (( icycle > maxcycle ))
1278	then
1279	(( maxcycle = icycle ))
1280	fi
1281	done <filelist
1282	rm filelist
1283	fi
1284
1285	# EVTL. ZYKLUSNUMMER AN DATEINAMEN ANFUEGEN UND PRUEFEN, OB SICH
1286	# DATEI AUCH WIRKLICH ANLEGEN LAESST. IM APPEND-FALL MUSS AN DEN
1287	# HOECHSTEN VORHANDENEN ZYKLUS-ANGEHAENGT WERDEN. ANLAGEPRUEFUNG
1288	# IST DANN NATUERLICH NICHT ZULAESSIG BZW. MOEGLICH
1289	if [[ "${actionout[$i]}" != a ]]
1290	then
1291	if (( maxcycle > 0 ))
1292	then
1293	filename=${filename}.$maxcycle
1294	if cat /dev/null > $filename
1295	then
1296	rm $filename
1297	else
1298	printf "\n +++ OUTPUT-file:"
1299	printf "\n $filename"
1300	printf "\n cannot be created"
1301	locat=output ; exit
1302	fi
1303	fi
1304	else
1305	(( maxcycle = maxcycle - 1 ))
1306	if (( maxcycle > 0 ))
1307	then
1308	filename=${filename}.$maxcycle
1309	fi
1310	fi
1311
1312	# DATEINAMEN OHNE PFAD ABER MIT ZYKLUSNUMMER ABSPEICHERN,
1313	# DA SPAETER BEI ABLAGE AUF ARCHIVSYSTEM BZW. FUER
1314	# DATEI OUTPUT_FILE_CONNECTIONS EVTL. BENOETIGT
1315	pathout[$i]=$filename
1316	if (( maxcycle > 0 ))
1317	then
1318	frelout[$i]=${fname}${endout[$i]}.$maxcycle
1319	else
1320	frelout[$i]=${fname}${endout[$i]}
1321	fi
1322
1323	fi
1324	done
1325
1326
1327	# DAS DVRP-PAKET ERFORDERT EINE ENTSPRECHENDE BIBLIOTHEK
1328	if [[ $(echo $package_list \| grep -c dvrp_graphics) != 0 ]]
1329	then
1330	if [[ "$dvrp_inc" = "" ]]
1331	then
1332	printf "\n\n +++ no value for \"dvrp_inc\" given in configuration file"
1333	printf "\n This is required for the dvrp_graphics package.\n"
1334	locat=dvrp; exit
1335	fi
1336	if [[ "$dvrp_lib" = "" ]]
1337	then
1338	printf "\n\n +++ no value for \"dvrp_lib\" given in configuration file"
1339	printf "\n This is required for the dvrp_graphics package.\n"
1340	locat=dvrp; exit
1341	fi
1342	fi
1343
1344
1345	# PRUEFEN, OB ENTWEDER HAUPTPROGRAMM ODER NUR EIN AUSFUEHRBARES
1346	# PROGRAMM VEREINBART WURDE (IN DIESEM FALL BRAUCHT IM WEITEREN NICHT
1347	# UEBERSETZT ZU WERDEN)
1348	if [[ "$mainprog" = "" && "$executable" = "" ]]
1349	then
1350	printf "\n +++ neither main program nor executable defined"
1351	locat=source; exit
1352	elif [[ "$mainprog" != "" && "$executable" != "" ]]
1353	then
1354	printf "\n +++ main program as well as executable defined"
1355	locat=source; exit
1356	elif [[ "$mainprog" = "" && "$executable" != "" ]]
1357	then
1358	do_compile=false
1359	fi
1360
1361
1362	# ALLE ZU UEBERSETZENDEN PROGRAMMTEILE ZUSAMMENSAMMELN
1363	# BEI BATCH-JOBS IST DIES NICHT NOETIG, WEIL DIE PROGRAMMTEILE BEREITS DURCH
1364	# DEN MRUN-AUFRUF ERMITTELT SIND, DER DEN BATCH-JOB GENERIERT HAT, UND
1365	# IM VERZEICHNIS SOURCES_FOR_RUN_... ABGELEGT SIND
1366	if [[ $do_compile = true && "$SOURCES_COMPLETE" = "" ]]
1367	then
1368
1369	[[ "$source_list" = LM ]] && source_list=LOCALLY_MODIFIED
1370	[[ "$source_list" = WP ]] && source_list=WRITE_PERMIT
1371
1372	if [[ $restart_run != true ]]
1373	then
1374	rm -rf SOURCES_FOR_RUN_$fname
1375	mkdir SOURCES_FOR_RUN_$fname
1376	fi
1377
1378
1379	# EVTL. ZU UEBERSETZENDE PROGRAMMTEILE DADURCH BESTIMMEN, DASS GEPRUEFT
1380	# WIRD, WELCHE DATEIEN WRITE-PERMIT BESITZEN (DATEIEN SOLLTEN DESHALB
1381	# UNTER RCS-KONTROLLE STEHEN). MIT DER VARIABLEN EXCLUDE KOENNEN
1382	# BESTIMMTE DATEIEN GRUNDSAETZLICH VON DER UEBERSETZUNG AUSGESCHLOSSEN
1383	# WERDEN. DIES IST NUR BEI MANUELLEM START VON MRUN DURCH DEN BENUTZER
1384	# MOEGLICH, DA BEI AUTOMATISCHEN RESTARTS TEST DURCH DIE TATSAECHLICH
1385	# ZU UBERSETZENDEN DATEIEN ERSETZT IST.
1386	# ALLE ERMITTELTEN DATEIEN WERDEN IM VERZEICHNIS SOURCES_FOR_RUN_...
1387	# GESAMMELT
1388	if [[ "$source_list" = WRITE_PERMIT ]]
1389	then
1390
1391	source_list=""
1392	cd $source_path
1393
1394
1395	# ALLE MOEGLICHEN QUELLCODEDATEIEN AUFLISTEN
1396	Names=$(ls -1 *.f90 2>&1)
1397	[[ $(echo $Names \| grep -c '*.f90') = 0 ]] && Filenames="$Names"
1398	Names=$(ls -1 *.F90 2>&1)
1399	[[ $(echo $Names \| grep -c '*.F90') = 0 ]] && Filenames="$Filenames $Names"
1400	Names=$(ls -1 *.F 2>&1)
1401	[[ $(echo $Names \| grep -c '*.F') = 0 ]] && Filenames="$Filenames $Names"
1402	Names=$(ls -1 *.f 2>&1)
1403	[[ $(echo $Names \| grep -c '*.f') = 0 ]] && Filenames="$Filenames $Names"
1404	Names=$(ls -1 *.c 2>&1)
1405	[[ $(echo $Names \| grep -c '*.c') = 0 ]] && Filenames="$Filenames $Names"
1406
1407
1408	# DATEIEN MIT WRITE-PERMIT NACH SOURCES_FOR_RUN_... KOPIEREN
1409	for dateiname in $Filenames
1410	do
1411	if [[ -w $dateiname ]]
1412	then
1413	if [[ "$exclude" = "" \|\| $(echo $exclude \| grep -c $dateiname) = 0 ]]
1414	then
1415	cp $dateiname $working_directory/SOURCES_FOR_RUN_$fname
1416	source_list=$source_list"$dateiname "
1417	fi
1418	fi
1419	done
1420
1421	cd - > /dev/null
1422
1423
1424	elif [[ "$source_list" = LOCALLY_MODIFIED ]]
1425	then
1426
1427	# MODIFIZIERTE DATEIEN DER SVN-ARBEITSKOPIE BESTIMMEN
1428	source_list=""
1429	cd $source_path
1430
1431
1432	# PRUEFEN, OB VERZEICHNIS UEBERHAUPT UNTER SVN-KONTROLLE STEHT
1433	if [[ ! -d .svn ]]
1434	then
1435	printf "\n\n +++ source directory"
1436	printf "\n \"$source_path\" "
1437	printf "\n is not under control of \"subversion\"."
1438	printf "\n Please do not use mrun-option \"-s LOCALLY MODIFIED\"\n"
1439	fi
1440
1441
1442	# ALLE MODIFIZIERTEN QUELLCODEDATEIEN AUFLISTEN
1443	Filenames=""
1444	svn status > tmp_mrun
1445	while read line
1446	do
1447	firstc=`echo $line \| cut -c1`
1448	if [[ $firstc = M \|\| $firstc = "?" ]]
1449	then
1450	Name=`echo "$line" \| cut -c8-`
1451	extension=`echo $Name \| cut -d. -f2`
1452	if [[ "$extension" = f90 \|\| "$extension" = F90 \|\| "$extension" = f \|\| "$extension" = F \|\| "$extension" = c ]]
1453	then
1454	Filenames="$Filenames "$Name
1455	fi
1456	fi
1457	done < tmp_mrun
1458
1459
1460	# DATEIEN NACH SOURCES_FOR_RUN_... KOPIEREN
1461	for dateiname in $Filenames
1462	do
1463	cp $dateiname $working_directory/SOURCES_FOR_RUN_$fname
1464	source_list=$source_list"$dateiname "
1465	done
1466
1467	cd - > /dev/null
1468
1469
1470	# MITTELS OPTION -s ANGEGEBENE DATEIEN NACH SOURCES_FOR_RUN_... KOPIEREN
1471	# BEI AUTOMATISCHEN FORTSETZUNGSLAEUFEN SIND DORT SCHON ALLE DATEIEN
1472	# VORHANDEN
1473	elif [[ "$source_list" != "" && $restart_run != true ]]
1474	then
1475
1476	cd $source_path
1477
1478	for filename in $source_list
1479	do
1480
1481	# QUELLTEXT-DATEI DARF KEINE PFADE BEINHALTEN
1482	if [[ $(print $filename \| grep -c "/") != 0 ]]
1483	then
1484	printf "\n +++ source code file: $filename"
1485	printf "\n must not contain (\"/\") "
1486	locat=source; exit
1487	fi
1488
1489	if [[ ! -f $filename ]]
1490	then
1491	printf "\n +++ source code file: $filename"
1492	printf "\n does not exist"
1493	locat=source; exit
1494	else
1495	cp $filename $working_directory/SOURCES_FOR_RUN_$fname
1496	fi
1497
1498	done
1499
1500	cd - > /dev/null
1501
1502	fi
1503
1504
1505	# PRUEFEN, OB ENTWEDER HAUPTPROGRAMM VORHANDEN UND ES EVTL. IN DER
1506	# LISTE DER ZU UEBERSETZENDEN PROGRAMMTEILE MIT ENTHALTEN IST (WENN
1507	# NICHT, WIRD ES DIESER LISTE HINZUGEFUEGT)
1508	if [[ $restart_run != true ]]
1509	then
1510
1511	if [[ ! -f "$source_path/$mainprog" ]]
1512	then
1513	printf "\n\n +++ main program: $mainprog"
1514	printf "\n does not exist in source directory"
1515	printf "\n \"$source_path\"\n"
1516	locat=source; exit
1517	else
1518	if [[ $(echo $source_list \| grep -c $mainprog) = 0 ]]
1519	then
1520	cp $source_path/$mainprog SOURCES_FOR_RUN_$fname
1521	source_list=${mainprog}" $source_list"
1522	fi
1523	fi
1524	fi
1525
1526
1527	# DATEIEN AUS ZUSAETZLICHEM QUELLVERZEICHNIS HINZUFUEGEN
1528	if [[ $restart_run != true && "$add_source_path" != "" ]]
1529	then
1530
1531	# GIBT ES DAS VERZEICHNIS UEBERHAUPT?
1532	if [[ ! -d $add_source_path ]]
1533	then
1534	printf "\n\n +++ WARNING: additional source code directory"
1535	printf "\n \"$add_source_path\" "
1536	printf "\n does not exist or is not a directory."
1537	printf "\n No source code will be used from this directory!\n"
1538	add_source_path=""
1539	sleep 3
1540	else
1541
1542	cd $add_source_path
1543
1544	Names=$(ls -1 *.f90 2>&1)
1545	[[ $(echo $Names \| grep -c '*.f90') = 0 ]] && AddFilenames="$Names"
1546	Names=$(ls -1 *.F90 2>&1)
1547	[[ $(echo $Names \| grep -c '*.F90') = 0 ]] && AddFilenames="$AddFilenames $Names"
1548	Names=$(ls -1 *.F 2>&1)
1549	[[ $(echo $Names \| grep -c '*.F') = 0 ]] && AddFilenames="$AddFilenames $Names"
1550	Names=$(ls -1 *.f 2>&1)
1551	[[ $(echo $Names \| grep -c '*.f') = 0 ]] && AddFilenames="$AddFilenames $Names"
1552	Names=$(ls -1 *.c 2>&1)
1553	[[ $(echo $Names \| grep -c '*.c') = 0 ]] && AddFilenames="$AddFilenames $Names"
1554
1555	cd - > /dev/null
1556	cd SOURCES_FOR_RUN_$fname
1557
1558	for dateiname in $AddFilenames
1559	do
1560	if [[ -f $dateiname ]]
1561	then
1562	printf "\n +++ source code file \"$dateiname\" found in additional"
1563	printf "\n source code directory \"$add_source_path\" "
1564	printf "\n as well as in directory \"$source_path\"."
1565	locat=source; exit
1566	fi
1567
1568	cp $add_source_path/$dateiname .
1569	source_list="$source_list $dateiname"
1570
1571	# Default User-Interface von der Liste entfernen, falls Datei
1572	# ein User-Interface enthaelt
1573	if [[ $( cat $dateiname \| grep -c "END SUBROUTINE user_parin" ) != 0 ]]
1574	then
1575	if [[ $dateiname != user_interface.f90 && -f user_interface.f90 ]]
1576	then
1577	rm -rf user_interface.f90
1578	source_list=`echo $source_list \| sed -e 's/user_interface.f90//'`
1579	printf "\n\n *** default \"user_interface.f90\" removed from the files to be translated"
1580	printf "\n since a user-interface is found in file"
1581	printf "\n \"$add_source_path/$dateiname\" \n"
1582	sleep 3
1583	else
1584	printf "\n\n *** user-interface file \"$dateiname\" "
1585	printf "\n added to the files to be translated \n"
1586	sleep 3
1587	fi
1588	fi
1589	done
1590
1591	cd - > /dev/null
1592	fi
1593	fi
1594
1595
1596	# ALLE UNTERPROGRAMME, DIE ZU VEREINBARTEN SOFTWAREPAKETEN GEHOEREN,
1597	# DER LISTE DER ZU UEBERSETZENDEN DATEIEN HINZUFUEGEN
1598	if [[ $restart_run != true && -n $package_list ]]
1599	then
1600
1601	cd $source_path
1602
1603	for package in $package_list
1604	do
1605
1606	[[ $package = "dvrp_graphics+1PE" ]] && package=dvrp_graphics
1607
1608	# ERMITTELE ALLE DATEIEN, DIE ZUM PAKET GEHOEREN
1609	# FEHLERMELDUNGEN WERDEN ABGEFANGEN, DA * AUCH VERZEICHNISSNAMEN
1610	# LIEFERT
1611	package_source_list=`grep "defined( __$package " * 2>/dev/null \| cut -f1 -d:`
1612
1613
1614	# FUEGE DIESE DATEIEN DER LISTE DER ZU UEBERSETZENDEN DATEIEN
1615	# HINZU, FALLS SIE NOCH NICHT DAZUGEHOEREN
1616	for source_list_name in $package_source_list
1617	do
1618	if [[ $(echo $source_list \| grep -c $source_list_name) = 0 ]]
1619	then
1620
1621	# NUR DATEIEN MIT GUELTIGEN ENDUNGEN VERWENDEN
1622	ending=`echo $source_list_name \| cut -f2 -d.`
1623	if [[ "$ending" = f90 \|\| "$ending" = F90 \|\| "$ending" = f \|\| "$ending" = F \|\| "$ending" = c ]]
1624	then
1625	cp $source_list_name $working_directory/SOURCES_FOR_RUN_$fname
1626	source_list="$source_list $source_list_name"
1627	fi
1628	fi
1629	done
1630	done
1631
1632	cd - > /dev/null
1633	fi
1634
1635
1636	# MAKEFILE AUF VORHANDENSEIN PRUEFEN UND KOPIEREN
1637	# BEI RESTART-LAEUFEN LIEGT ES SCHON IM VERZEICHNIS SOURCES_FOR_RUN...
1638	if [[ "$restart_run" != true ]]
1639	then
1640	[[ "$makefile" = "" ]] && makefile=$source_path/Makefile
1641	if [[ ! -f $makefile ]]
1642	then
1643	printf "\n +++ file \"$makefile\" does not exist"
1644	locat=make; exit
1645	else
1646	cp $makefile SOURCES_FOR_RUN_$fname/Makefile
1647	fi
1648	fi
1649
1650	fi # do_compile=true
1651
1652
1653	# FALLS PROGRAMMTEILE UEBERSETZT WERDEN SOLLEN, FOLGEN JETZT EINIGE
1654	# UEBERPRUEFUNGEN UND DAS SETZEN DER PRAEPROZESSOR-DIREKTIVEN
1655	if [[ $do_compile = true ]]
1656	then
1657
1658	# PRAEPROZESSOR-DIREKTIVEN ZUM SELEKTIVEN AUSWAEHLEN VON CODETEILEN
1659	# ZUSAMMENSETZEN
1660	# DIREKTIVEN ZUM AKTIVIEREN VON RECHNERSPEZIFISCHEM CODE
1661	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1662	then
1663	cpp_options="${cpp_options},-D__ibm=__ibm"
1664	elif [[ $(echo $localhost \| cut -c1-3) = nec ]]
1665	then
1666	cpp_options="$cpp_options -D__nec"
1667	elif [[ $(echo $localhost \| cut -c1-2) = lc ]]
1668	then
1669	cpp_options="$cpp_options -D__lc"
1670	else
1671	cpp_options="$cpp_options -D__$localhost"
1672	fi
1673
1674	# DIREKTIVEN DIE DURCH OPTION -K BESTIMMT WERDEN (Z.B. PARALLEL)
1675	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1676	then
1677	[[ -n $cond1 ]] && cpp_options="${cpp_options},-D__$cond1=__$cond1"
1678	[[ -n $cond2 ]] && cpp_options="${cpp_options},-D__$cond2=__$cond2"
1679	else
1680	[[ -n $cond1 ]] && cpp_options="$cpp_options -D__$cond1"
1681	[[ -n $cond2 ]] && cpp_options="$cpp_options -D__$cond2"
1682	fi
1683
1684	# DIREKTIVEN DIE SOFTWAREPAKETE AKTIVIEREN (OPTION -p)
1685	if [[ -n $package_list ]]
1686	then
1687	for package in $package_list
1688	do
1689	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1690	then
1691	if [[ $package != "dvrp_graphics+1PE" ]]
1692	then
1693	cpp_options="${cpp_options},-D__$package=__$package"
1694	else
1695	cpp_options="${cpp_options},-D__dvrp_graphics=__dvrp_graphics"
1696	export use_seperate_pe_for_dvrp_output=true
1697	fi
1698	else
1699	if [[ $package != "dvrp_graphics+1PE" ]]
1700	then
1701	cpp_options="$cpp_options -D__$package"
1702	else
1703	cpp_options="$cpp_options -D__dvrp_graphics"
1704	export use_seperate_pe_for_dvrp_output=true
1705	fi
1706	fi
1707	done
1708	fi
1709
1710	# DIREKTIVEN DIE DURCH OPTION -D FESTGELEGT SIND
1711	if [[ -n $cpp_opts ]]
1712	then
1713	for popts in $cpp_opts
1714	do
1715	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1716	then
1717	cpp_options="${cpp_options},-D__$popts=__$popts"
1718	else
1719	cpp_options="$cpp_options -D__$popts"
1720	fi
1721	done
1722	fi
1723
1724	else
1725
1726
1727	# BEI LOKALEN RECHNUNGEN PRUEFEN, OB EXECUTABLE VORHANDEN
1728	if [[ $do_remote = false ]]
1729	then
1730	if [[ ! -f $executable ]]
1731	then
1732	printf "\n +++ executable file: $executable"
1733	printf "\n does not exist"
1734	locat=executable; exit
1735	fi
1736	fi
1737	fi
1738
1739
1740	# JOBMODUS FESTSTELLEN
1741	if [[ "$ENVIRONMENT" = BATCH && $localhost != lctit \|\| "$QUEUE" != interactive && $localhost = lctit ]]
1742	then
1743	jobmo=BATCH
1744	else
1745	jobmo=INTERACTIVE
1746	fi
1747
1748
1749	# HOSTSPEZIFISCHE DEFAULT-COMPILER SETZEN, FALLS NICHT BEREITS
1750	# DURCH BENUTZER ANDERWEITIG VEREINBART
1751	if [[ "$compiler_name" = "" ]]
1752	then
1753
1754	printf "\n +++ no compiler specified for \"$localhost $cond1 $cond2\""
1755	locat=compiler_name; exit
1756
1757	fi
1758
1759
1760	# COMPILER AUF NECK UEBERSCHREIBEN
1761	[[ $localhost = neck ]] && compiler_name=mpif90
1762
1763
1764
1765	# TEMPORAEREN KATALOGNAMEN BESTIMMEN
1766	kennung=$RANDOM
1767	if [[ "$tmp_user_catalog" = "" ]]
1768	then
1769	if [[ $localhost = ibmb \|\| $localhost = ibmh ]]
1770	then
1771	tmp_user_catalog=$TMPDIR
1772	elif [[ $localhost = nech ]]
1773	then
1774	tmp_user_catalog=$WRKSHR
1775	else
1776	tmp_user_catalog=/tmp
1777	fi
1778	fi
1779	TEMPDIR=$tmp_user_catalog/${usern}.$kennung
1780
1781
1782	# KATALOGNAMEN FUER ZWISCHENSPEICHERUNG VON FORTSETZUNGSLAUFDATEIEN
1783	# BESTIMMEN
1784	if [[ "$tmp_data_catalog" = "" ]]
1785	then
1786	if [[ $localhost = ibmb \|\| $localhost = ibmh ]]
1787	then
1788	tmp_data_catalog=$WORK/mrun_restart_data
1789	elif [[ $localhost = nech ]]
1790	then
1791	tmp_data_catalog=$WRKSHR/mrun_restart_data
1792	else
1793	tmp_data_catalog=/tmp/mrun_restart_data
1794	fi
1795	fi
1796
1797
1798	# EVENTUELL BEI LOKALEN RECHNUNGEN $-ZEICHEN IN ENVIRONMENT-VARIABLEN
1799	# ERSETZEN
1800	if [[ $do_remote = false && $do_compile = true ]]
1801	then
1802	eval fopts=\"$fopts\"
1803	eval lopts=\"$lopts\"
1804	fi
1805
1806
1807
1808	# COMPILE- UND LINK-OPTIONEN BESTIMMEN
1809	fopts="$fopts $netcdf_inc $dvrp_inc"
1810	lopts="$lopts $netcdf_lib $dvrp_lib"
1811	ROPTS="$ropts"
1812	if [[ ( $(echo $host \| cut -c1-3) = nec \|\| $(echo $host \| cut -c1-3) = ibm \|\| $host = lctit \|\| $host = lcfimm ) && -n $numprocs ]]
1813	then
1814	XOPT="-X $numprocs"
1815	fi
1816
1817
1818
1819	# PRUEFEN DER CPU-ZEIT. (CPUMAX WIRD ALS ENV-VARIABLE VOM HAUTPRO-
1820	# GRAMM BENOETIGT
1821	done=false
1822	while [[ $done = false ]]
1823	do
1824	cputime=$cpumax
1825	if (( $cputime == 0 ))
1826	then
1827	printf "\n +++ cpu-time is undefined"
1828	printf "\n >>> Please type CPU-time in seconds as INTEGER:"
1829	printf "\n >>> "
1830	read cputime 1>/dev/null 2>&1
1831	else
1832	done=true
1833	fi
1834	cpumax=$cputime
1835	done
1836
1837	(( minuten = cputime / 60 ))
1838	(( sekunden = cputime - minuten * 60 ))
1839
1840
1841	# PRUEFEN DER KERNSPEICHERANFORDERUNG
1842	if [[ $do_batch = true ]]
1843	then
1844	done=false
1845	while [[ $done = false ]]
1846	do
1847	if (( memory == 0 ))
1848	then
1849	printf "\n +++ memory demand is undefined"
1850	printf "\n >>> Please type memory in MByte per process as INTEGER:"
1851	printf "\n >>> "
1852	read memory 1>/dev/null 2>&1
1853	else
1854	done=true
1855	fi
1856	done
1857	fi
1858
1859
1860	# PRUEFEN, OB FUER REMOTE-RECHNUNGEN EIN BENUTZERNAME ANGEGEBEN WURDE
1861	if [[ $do_remote = true && -z $remote_username ]]
1862	then
1863	while [[ -z $remote_username ]]
1864	do
1865	printf "\n +++ username on remote host \"$host\" is undefined"
1866	printf "\n >>> Please type username:"
1867	printf "\n >>> "
1868	read remote_username
1869	done
1870	mc="$mc -u$remote_username"
1871	fi
1872
1873	###########################################################################
1874	# HEADER-AUSGABE
1875	###########################################################################
1876
1877
1878	calltime=$(date)
1879	printf "\n"
1880	# [[ $silent = false ]] && clear
1881	printf "#--------------------------------------------------------------# \n"
1882	printf "\| $version$calltime \| \n"
1883	printf "\| \| \n"
1884	spalte1="called on:"; spalte2=$localhost_realname
1885	printf "\| $spalte1$spalte2 \| \n"
1886	if [[ $local_compile = false ]]
1887	then
1888	if [[ $do_remote = true ]]
1889	then
1890	spalte1="execution on:"; spalte2="$host (username: $remote_username)"
1891	else
1892	spalte1="execution on:"; spalte2="$host ($localhost_realname)"
1893	fi
1894	else
1895	spalte1="compiling test only!"; spalte2=""
1896	fi
1897	printf "\| $spalte1$spalte2 \| \n"
1898	if [[ -n $numprocs ]]
1899	then
1900	spalte1="number of PEs:"; spalte2=$numprocs
1901	printf "\| $spalte1$spalte2 \| \n"
1902	fi
1903	if [[ -n $tasks_per_node ]]
1904	then
1905	spalte1="tasks per node:"; spalte2="$tasks_per_node (number of nodes: $nodes)"
1906	printf "\| $spalte1$spalte2 \| \n"
1907	fi
1908	if [[ $threads_per_task != 1 ]]
1909	then
1910	spalte1="threads per task:"; spalte2="$threads_per_task"
1911	printf "\| $spalte1$spalte2 \| \n"
1912	fi
1913	printf "\| \| \n"
1914	if [[ $do_compile = true ]]
1915	then
1916	spalte1=cpp-directives:; spalte2=$cpp_options
1917	printf "\| $spalte1$spalte2 \| \n"
1918	zeile=$(echo "$cpp_options" \| cut -c41-)
1919	while [[ "$zeile" != "" ]]
1920	do
1921	spalte1=""
1922	spalte2=$zeile
1923	printf "\| $spalte1$spalte2 \| \n"
1924	zeile=$(echo "$zeile" \| cut -c41-)
1925	done
1926
1927	spalte1=compiler-options:; spalte2="$fopts"
1928	printf "\| $spalte1$spalte2 \| \n"
1929	zeile=$(echo "$fopts" \| cut -c41-)
1930	while [[ "$zeile" != "" ]]
1931	do
1932	spalte1=""
1933	spalte2=$zeile
1934	printf "\| $spalte1$spalte2 \| \n"
1935	zeile=$(echo "$zeile" \| cut -c41-)
1936	done
1937
1938	spalte1=linker-options:; spalte2=$lopts
1939	printf "\| $spalte1$spalte2 \| \n"
1940	zeile=$(echo "$lopts" \| cut -c41-)
1941	while [[ "$zeile" != "" ]]
1942	do
1943	spalte1=""
1944	spalte2=$zeile
1945	printf "\| $spalte1$spalte2 \| \n"
1946	zeile=$(echo "$zeile" \| cut -c41-)
1947	done
1948
1949	spalte1="main program":; spalte2=$mainprog
1950	printf "\| $spalte1$spalte2 \| \n"
1951	else
1952	spalte1=executable:; spalte2=$executable
1953	printf "\| $spalte1$spalte2 \| \n"
1954	fi
1955	printf "\| \| \n"
1956	spalte1="base name of files":; spalte2=$fname
1957	printf "\| $spalte1$spalte2 \| \n"
1958	if [[ $fname != $afname ]]
1959	then
1960	spalte1="base name of input files":; spalte2=$afname
1961	printf "\| $spalte1$spalte2 \| \n"
1962	fi
1963	spalte1="INPUT control list":; spalte2=$input_list
1964	printf "\| $spalte1$spalte2 \| \n"
1965	spalte1="OUTPUT control list":; spalte2=$output_list
1966	printf "\| $spalte1$spalte2 \| \n"
1967
1968	if [[ $do_batch = true \|\| "$LOADLBATCH" = yes ]]
1969	then
1970	spalte1="memory demand / PE":; spalte2="$memory MB"
1971	printf "\| $spalte1$spalte2 \| \n"
1972	spalte1=CPU-time:; spalte2="$minuten:$sekunden"
1973	printf "\| $spalte1$spalte2 \| \n"
1974	fi
1975
1976	if [[ $do_compile = true ]]
1977	then
1978	printf "\| \| \n"
1979	printf "\| Files to be compiled: \| \n"
1980	zeile=$source_list
1981	while [[ "$zeile" != "" ]]
1982	do
1983	spalte3=$zeile
1984	printf "\| $spalte3 \| \n"
1985	zeile=$(echo "$zeile" \| cut -c61-)
1986	done
1987	fi
1988	printf "#--------------------------------------------------------------#"
1989
1990
1991
1992	# BEDINGTE AUSGABE DER DATEIVERBINDUNGEN
1993	if [[ $do_trace = true ]]
1994	then
1995	(( i = 0 ))
1996	while (( i < iin ))
1997	do
1998	(( i = i + 1 ))
1999	if (( i == 1 ))
2000	then
2001	printf "\n\n >>> INPUT-file assignments:\n"
2002	fi
2003	printf "\n ${localin[$i]} : ${absnamein[$i]}"
2004	done
2005	(( i = 0 ))
2006	while (( i < iout ))
2007	do
2008	(( i = i + 1 ))
2009	if (( i == 1 ))
2010	then
2011	printf "\n\n >>> OUTPUT-file assignments:\n"
2012	fi
2013	printf "\n ${localout[$i]} : ${pathout[$i]}"
2014	done
2015	(( i = 0 ))
2016	while (( i < iic ))
2017	do
2018	(( i = i + 1 ))
2019	if (( i == 1 ))
2020	then
2021	printf "\n\n >>> INPUT-commands:\n"
2022	fi
2023	printf "\n ${in_command[$i]}"
2024	done
2025	(( i = 0 ))
2026	while (( i < ioc ))
2027	do
2028	(( i = i + 1 ))
2029	if (( i == 1 ))
2030	then
2031	printf "\n\n >>> OUTPUT-commands:\n"
2032	fi
2033	printf "\n ${out_command[$i]}"
2034	done
2035	fi
2036
2037
2038	# ABFRAGEN BEI AUFRUF AUF LOKALER MASCHINE
2039	if [[ $remotecall = false && $silent = false && $jobmo != BATCH ]]
2040	then
2041	antwort=dummy
2042	printf "\n\n"
2043	while [[ "$antwort" != y && "$antwort" != Y && "$antwort" != n && "$antwort" != N ]]
2044	do
2045	printf " >>> everything o.k. (y/n) ? "
2046	read antwort
2047	done
2048	if [[ $antwort = n \|\| $antwort = N ]]
2049	then
2050	locat=user_abort; (( iec = 0 )); exit
2051	fi
2052	if [[ $do_batch = true ]]
2053	then
2054	printf " >>> batch-job will be created and submitted"
2055	else
2056	if [[ $local_compile = false ]]
2057	then
2058	printf " >>> MRUN will now continue to execute on this machine"
2059	else
2060	printf " >>> a test compilation will now be carried out on this machine"
2061	fi
2062	fi
2063	fi
2064
2065
2066
2067
2068	# FALLS AUF DIESER MASCHINE GERECHNET WERDEN SOLL, WERDEN JETZT ENTSPRE-
2069	# CHENDE AKTIONEN DURCHGEFUEHRT
2070	if [[ $do_batch = false ]]
2071	then
2072
2073
2074	# TEMPORAEREN KATALOG ERZEUGEN
2075	mkdir -p $TEMPDIR
2076	chmod go+rx $TEMPDIR
2077	tmpcreate=true
2078
2079
2080	# SAEMTLICHE QUELLTEXT-DATEIEN BZW. AUSFUEHRBARES PROGRAMM IN
2081	# TEMPORAERES VERZEICHNIS KOPIEREN
2082	if [[ $do_compile = true ]]
2083	then
2084
2085	# ON NEC, COMPILATION IS DONE ON HOST CROSS VIA CROSS COMPILING
2086	# CREATE A TEMPORARY DIRECTORY ON THAT MACHINE (HOME MOUNTED VIA NFS)
2087	if [[ $localhost = nech ]]
2088	then
2089	TEMPDIR_COMPILE=$HOME/work/${usern}.$kennung
2090	if mkdir -p $TEMPDIR_COMPILE
2091	then
2092	printf "\n *** \"$TEMPDIR_COMPILE\" "
2093	printf "\n is generated as temporary directory for cross compiling\n"
2094	else
2095	printf "\n +++ creating directory \"$TEMPDIR_COMPILE\" "
2096	printf "\n needed for cross compilation failed"
2097	locat=compile
2098	exit
2099	fi
2100	else
2101	TEMPDIR_COMPILE=$TEMPDIR
2102	fi
2103
2104
2105	# PFADNAMEN FUER DAS MAKE-DEPOSITORY ERMITTELN
2106	line=""
2107	grep "%depository_path" $config_file > tmp_mrun
2108	while read line
2109	do
2110	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
2111	then
2112	if [[ "$(echo $line \| cut -d" " -s -f3)" = "" ]]
2113	then
2114	global_depository_path=`echo $line \| cut -d" " -s -f2`
2115	fi
2116	fi
2117	done < tmp_mrun
2118
2119	line=""
2120	grep " $localhost" $config_file \| grep "%depository_path" > tmp_mrun
2121	while read line
2122	do
2123	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
2124	then
2125	local_depository_path=`echo $line \| cut -d" " -s -f2`
2126	fi
2127	done < tmp_mrun
2128
2129	if [[ "$local_depository_path" = "" ]]
2130	then
2131	if [[ "$global_depository_path" != "" ]]
2132	then
2133	local_depository_path=$global_depository_path
2134	else
2135	printf "\n\n +++ no depository path found in configuration file"
2136	printf "\n for local host \"$localhost\" "
2137	printf "\n please set \"\%depository_path\" in configuration file\n"
2138	locat=config_file; exit
2139	fi
2140	fi
2141	eval local_depository_path=$local_depository_path
2142
2143	basename=`print $mainprog \| cut -f1 -d"."`
2144	eval make_depository=${local_depository_path}/${basename}_current_version.tar
2145	if [[ ! -f $make_depository ]]
2146	then
2147	printf "\n"
2148	printf "\n *** WARNING: make depository \"$make_depository\" not found"
2149	printf "\n \"make\" will fail, if the Makefile or other source files are missing\n"
2150	else
2151	cp $make_depository $TEMPDIR_COMPILE
2152	cd $TEMPDIR_COMPILE
2153	tar -xf $make_depository > /dev/null 2>&1
2154	cd - > /dev/null
2155	fi
2156
2157	cp SOURCES_FOR_RUN_$fname/* $TEMPDIR_COMPILE
2158
2159	# FALLS USER-INTERFACE VORHANDEN UND AUF DATEI MIT ANDEREM NAMEN
2160	# ALS user_interface.f90 LIEGT, DIESEN GEAENDERTEN NAMEN INS
2161	# MAKEFILE EINTRAGEN
2162	cd $TEMPDIR_COMPILE
2163	interface_file=`grep -l "END SUBROUTINE user_parin" $source_list`
2164	if [[ "$interface_file" != "" ]]
2165	then
2166	interface_file=`echo $interface_file \| cut -d"." -f1`
2167	mv Makefile Makefile_old
2168	sed "s/user_interface/$interface_file/g" Makefile_old > Makefile
2169	fi
2170	cd - > /dev/null
2171	else
2172	cp $executable ${TEMPDIR}/a.out
2173	fi
2174
2175
2176	# WECHSEL IN TEMPORAEREN KATALOG
2177	cd $TEMPDIR
2178	printf "\n *** changed to temporary directory: $TEMPDIR"
2179
2180
2181	# OUTPUT-DATEI-VERBINDUNGEN AUF TEMPORAERER DATEI ABLEGEN
2182	# DIESE DATEI KANN VON SPAETER AUFZURUFENDEN BENUTZERPROZEDUREN GELESEN
2183	# WERDEN, UM ZU LOKALEN DATEINAMEN GEHOERENDE PERMANENTE NAMEN ZU
2184	# ERMITTELN
2185	(( i = 0 ))
2186	while (( i < iout ))
2187	do
2188	(( i = i + 1 ))
2189	if [[ "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = tra \|\| "${actionout[$i]}" = trpe ]]
2190	then
2191	printf "${localout[$i]} ${actionout[$i]}\n${pathout[$i]}\n${localhost}_${fname}${endout[$i]}\n" >> OUTPUT_FILE_CONNECTIONS
2192	else
2193	printf "${localout[$i]} ${actionout[$i]}\n${pathout[$i]}\n${frelout[$i]}\n" >> OUTPUT_FILE_CONNECTIONS
2194	fi
2195	done
2196
2197
2198	# EVTL. UEBERSETZUNGSAKTIONEN STARTEN
2199	if [[ $do_compile = true ]]
2200	then
2201
2202
2203	# COMPILING WITH MAKE (ON NEC COMPILER IS CALLED ON HOST CROSS)
2204	printf "\n\n\n *** compilation starts \n$striche\n"
2205	printf " *** compilation with make using following options:\n"
2206	printf " compilername: $compiler_name\n"
2207	printf " options: $fopts\n"
2208	printf " preprocessor-directives: $cpp_options \n"
2209	printf " linker-options: $lopts \n"
2210	printf " source code files: $source_list \n"
2211
2212	if [[ $localhost = nech ]]
2213	then
2214	ssh 136.172.44.192 -l $usern ". /SX/opt/etc/initsx.sh; cd \$HOME/work/${usern}.$kennung; sxmake -f Makefile PROG=a.out F90=$compiler_name COPT=\"$cpp_options\" F90FLAGS=\"$fopts\" LDFLAGS=\"$lopts\" "
2215	cp $TEMPDIR_COMPILE/a.out .
2216	[[ $? != 0 ]] && compile_error=true
2217	rm -rf $TEMPDIR_COMPILE
2218	else
2219	[[ $localhost = lctit ]] && export LM_LICENSE_FILE=27050@tggls
2220	make -f Makefile PROG=a.out F90=$compiler_name COPT="$cpp_options" F90FLAGS="$fopts" LDFLAGS="$lopts"
2221	fi
2222
2223	if [[ $? != 0 \|\| "$compile_error" = true \|\| "$module_compile_error" = true ]]
2224	then
2225	printf "\n +++ error occured while compiling or linking"
2226	locat=compile
2227	exit
2228	else
2229	printf "$striche\n *** compilation finished \n"
2230	fi
2231	fi
2232
2233
2234	# FALLS NUR TESTWEISE KOMPILIERT WERDEN SOLLTE, IST MRUN JETZT FERTIG
2235	if [[ $local_compile = true ]]
2236	then
2237	cd $HOME
2238	rm -rf $TEMPDIR
2239	locat=local_compile; exit
2240	fi
2241
2242
2243	# BEREITSTELLEN DER INPUT-DATEIEN
2244	# SCHLEIFE UEBER ALLE VOM BENUTZER ANGEGEBENEN DATEIEN
2245	(( i = 0 ))
2246	while (( i < iin ))
2247	do
2248	(( i = i + 1 ))
2249	if (( i == 1 ))
2250	then
2251	printf "\n\n *** providing INPUT-files:\n$striche"
2252	fi
2253
2254
2255	# OPTIONALE DATEIEN BEI NICHTVORHANDENSEIN UEBERGEHEN
2256	if [[ "${transin[$i]}" = unavailable ]]
2257	then
2258	if [[ "${extin[$i]}" = "" \|\| "${extin[$i]}" = " " ]]
2259	then
2260	printf "\n +++ WARNING: input file \"${pathin[$i]}/${afname}${endin[$i]}\" "
2261	printf "\n is not available!"
2262	else
2263	printf "\n +++ WARNING: input file \"${pathin[$i]}/${afname}${endin[$i]}.${extin[$i]}\" "
2264	printf "\n is not available!"
2265	fi
2266	continue
2267	fi
2268
2269	# PRUEFEN, OB EINZELDATEI ODER DATEI PRO PROZESSOR
2270	files_for_pes=false; datentyp=file
2271	if [[ "${actionin[$i]}" = pe && -n $numprocs ]]
2272	then
2273	files_for_pes=true; datentyp=directory
2274	actionin[$i]=""
2275	elif [[ "${actionin[$i]}" = pe && ! -n $numprocs ]]
2276	then
2277	actionin[$i]=""
2278	elif [[ "${actionin[$i]}" = arpe && -n $numprocs ]]
2279	then
2280	files_for_pes=true; datentyp=directory
2281	actionin[$i]="ar"
2282	elif [[ "${actionin[$i]}" = arpe && ! -n $numprocs ]]
2283	then
2284	actionin[$i]="ar"
2285	elif [[ "${actionin[$i]}" = flpe && -n $numprocs ]]
2286	then
2287	files_for_pes=true; datentyp=directory
2288	actionin[$i]="fl"
2289	elif [[ "${actionin[$i]}" = flpe && ! -n $numprocs ]]
2290	then
2291	actionin[$i]="fl"
2292	fi
2293
2294	if [[ $files_for_pes = true ]]
2295	then
2296	printf "\n >>> INPUT: ${absnamein[$i]}/.... to ${localin[$i]}"
2297	else
2298	printf "\n >>> INPUT: ${absnamein[$i]} to ${localin[$i]}"
2299	fi
2300
2301	# INPUT-DATEI FUER EINEN FORTSETZUNGSLAUF. ES WIRD GEPRUEFT,
2302	# OB DIESE DATEI NOCH AUF DEM TEMPORAEREN DATENKATALOG VORHANDEN
2303	# IST. FALLS NICHT, WIRD VERSUCHT, SIE ANSCHLIESSEND VOM ARCHIV-
2304	# SERVER ZU HOLEN
2305	if [[ "${actionin[$i]}" = fl ]]
2306	then
2307	printf "\n $datentyp will be fetched from temporary directory \"${tmp_data_catalog}\" !"
2308	if [[ $files_for_pes = false ]]
2309	then
2310	if [[ -f "$tmp_data_catalog/${frelin[$i]}" ]]
2311	then
2312	ln $tmp_data_catalog/${frelin[$i]} ${localin[$i]}
2313	got_tmp[$i]=true
2314	elif [[ -f "$WORK/${frelin[$i]}" && $ignore_archive_error = true ]]
2315	then
2316	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" !"
2317	printf "\n *** trying to use backup copy in \"$WORK\" "
2318	cp $WORK/${frelin[$i]} ${localin[$i]}
2319	else
2320	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" "
2321	printf "\n or \"$tmp_data_catalog\" does not exist!"
2322	printf "\n *** trying to get copy from archive"
2323	actionin[$i]=ar
2324	fi
2325	else
2326	if [[ -d "$tmp_data_catalog/${frelin[$i]}" ]]
2327	then
2328	mkdir ${localin[$i]}
2329	ln $tmp_data_catalog/${frelin[$i]}/* ${localin[$i]}
2330	got_tmp[$i]=true
2331	elif [[ -d "$WORK/${frelin[$i]}" && $ignore_archive_error = true ]]
2332	then
2333	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" !"
2334	printf "\n *** trying to use backup copy in \"$WORK\" "
2335	cp -r $WORK/${frelin[$i]} ${localin[$i]}
2336	else
2337	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" "
2338	printf "\n or \"$tmp_data_catalog\" does not exist!"
2339	printf "\n *** trying to get copy from archive"
2340	actionin[$i]=ar
2341	fi
2342	fi
2343	fi
2344
2345
2346	# DATEI LIEGT AUF ARCHIV-SERVER
2347	if [[ "${actionin[$i]}" = ar ]]
2348	then
2349
2350	if [[ $files_for_pes = false ]]
2351	then
2352	printf "\n file will be restored from archive-system ($archive_system)!"
2353	else
2354	printf "\n directory will be restored from archive-system ($archive_system)!"
2355	fi
2356
2357	file_restored=false
2358
2359	if [[ $archive_system = asterix ]]
2360	then
2361	do_stagein=true
2362	(( stagein_anz = 0 ))
2363	while [[ $do_stagein = true ]]
2364	do
2365	if [[ $files_for_pes = false ]]
2366	then
2367	stagein -O ${frelin[$i]} > STAGEIN_OUTPUT
2368	else
2369	stagein -t -O ${frelin[$i]} > STAGEIN_OUTPUT
2370	fi
2371	cat STAGEIN_OUTPUT
2372	if [[ $(grep -c "st.msg:i24" STAGEIN_OUTPUT) != 0 ]]
2373	then
2374	file_restored=true
2375	do_stagein=false
2376	else
2377	(( stagein_anz = stagein_anz + 1 ))
2378	if (( stagein_anz == 10 ))
2379	then
2380	printf "\n +++ stagein stoped after 10 tries"
2381	locat=stage
2382	exit
2383	fi
2384	printf "\n +++ restoring from archive failed, trying again:"
2385	sleep 900
2386	fi
2387	done
2388	elif [[ $archive_system = DMF ]]
2389	then
2390	if [[ $files_for_pes = false ]]
2391	then
2392	printf "\n +++ restoring of single files impossible with $archive_system !\n"
2393	locat=DMF
2394	exit
2395	else
2396	find $ARCHIVE/${frelin[$i]} -type m -print \| dmget
2397	cp -r $ARCHIVE/${frelin[$i]} $PWD
2398	file_restored=true
2399	fi
2400	elif [[ $archive_system = tivoli ]]
2401	then
2402	if [[ $files_for_pes = false ]]
2403	then
2404	if [[ $localhost = ibmh ]]
2405	then
2406	ssh $usern@hdata.hlrn.de "cp $PERM/${frelin[$i]} $PWD"
2407	else
2408	ssh $usern@bdata.hlrn.de "cp $PERM/${frelin[$i]} $PWD"
2409	fi
2410	else
2411	(( inode = 0 ))
2412	while (( inode < nodes ))
2413	do
2414	if [[ $localhost = ibmh ]]
2415	then
2416	ssh $usern@hdata.hlrn.de "cd $PWD; tar xf $PERM/${frelin[$i]}/${frelin[$i]}.node_$inode.tar"
2417	else
2418	ssh $usern@bdata.hlrn.de "cd $PWD; tar xf $PERM/${frelin[$i]}/${frelin[$i]}.node_$inode.tar"
2419	fi
2420	(( inode = inode + 1 ))
2421	done
2422	fi
2423	file_restored=true
2424	elif [[ $archive_system = ut ]]
2425	then
2426	if [[ $files_for_pes = false ]]
2427	then
2428	cp $UT/${frelin[$i]} .
2429	else
2430	(( inode = 0 ))
2431	while (( inode < nodes ))
2432	do
2433	tar xf $UT/${frelin[$i]}/${frelin[$i]}.node_$inode.tar
2434	(( inode = inode + 1 ))
2435	done
2436	fi
2437	file_restored=true
2438	else
2439	printf "\n +++ archive_system=\"$archive_system\" restore impossible!"
2440	locat=rearchive
2441	exit
2442	fi
2443
2444	if [[ $file_restored = true ]]
2445	then
2446
2447	# DATEI AUCH AUF TEMPORAERES DATENVERZEICHNIS LEGEN, DAMIT
2448	# SIE BEI WEITEREN ZUGRIFFEN NOCH VORHANDEN IST
2449	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog; chmod g+rx $tmp_data_catalog
2450	if [[ $files_for_pes = false ]]
2451	then
2452	ln -f ${frelin[$i]} $tmp_data_catalog/${frelin[$i]}
2453	else
2454	mkdir $tmp_data_catalog/${frelin[$i]}
2455	ln -f ${frelin[$i]}/* $tmp_data_catalog/${frelin[$i]}
2456	fi
2457	got_tmp[$i]=true
2458
2459	# DATEI UNTER LOKALEM NAMEN ZUR VERFUEGUNG STELLEN
2460	mv ${frelin[$i]} ${localin[$i]}
2461
2462	fi
2463	fi
2464
2465
2466	# DATEI LIEGT IM VOM BENUTZER ANGEGEBENEN VERZEICHNIS
2467	if [[ "${actionin[$i]}" = "" \|\| "${actionin[$i]}" = "di" \|\| "${actionin[$i]}" = "npe" ]]
2468	then
2469
2470	if [[ "${actionin[$i]}" = "npe" && -n $numprocs ]]
2471	then
2472
2473	# DATEI WIRD FUER DIE PROZESSOREN EINES PARALLERECHNERS BEREITGESTELLT
2474	printf "\n file will be provided for $numprocs processors"
2475	mkdir ${localin[$i]}
2476	ival=$numprocs
2477	(( ii = 0 ))
2478	while (( ii <= ival-1 ))
2479	do
2480	if (( ii < 10 ))
2481	then
2482	cp ${absnamein[$i]} ${localin[$i]}/_000$ii
2483	elif (( ii < 100 ))
2484	then
2485	cp ${absnamein[$i]} ${localin[$i]}/_00$ii
2486	elif (( ii < 1000 ))
2487	then
2488	cp ${absnamein[$i]} ${localin[$i]}/_0$ii
2489	else
2490	cp ${absnamein[$i]} ${localin[$i]}/_$ii
2491	fi
2492	(( ii = ii + 1 ))
2493	done
2494
2495	else
2496
2497	if [[ $files_for_pes = true ]]
2498	then
2499
2500	# DIE DEN PROZESSOREN EINES PARALLELRECHNERS ZUGEHOERIGEN
2501	# DATEIEN WERDEN BEREITGESTELLT, INDEM ZUERST DER GESAMTE
2502	# KATALOGINHALT KOPIERT UND DANN DIE EINZELNEN DATEIEN
2503	# PER MOVE UMBENANNT WERDEN
2504	printf "\n providing $numprocs files for the respective processors"
2505	mkdir ${localin[$i]}
2506	cp -r ${absnamein[$i]}/* ${localin[$i]}
2507
2508	else
2509	# BEREITSTELLUNG AUF EINPROZESSORRECHNERN
2510	cp ${absnamein[$i]} ${localin[$i]}
2511	fi
2512	fi
2513	fi
2514
2515	done
2516	if (( i != 0 ))
2517	then
2518	printf "\n$striche\n *** all INPUT-files provided \n"
2519	fi
2520
2521
2522	# NAMELIST-DATEI MIT WERTEN VON ENVIRONMENT-VARIABLEN ERZEUGEN (ZU
2523	# LESEN VON PALM)
2524	cat > ENVPAR << %%END%%
2525	&envpar run_identifier = '$fname', host = '$localhost',
2526	write_binary = '$write_binary', tasks_per_node = $tasks_per_node,
2527	maximum_cpu_time_allowed = ${cpumax}.,
2528	revision = '$global_revision' /
2529
2530	%%END%%
2531
2532
2533	# EVENTUELLE INPUT-KOMMANDOS ABARBEITEN
2534	(( i = 0 ))
2535	while (( i < iic ))
2536	do
2537	(( i = i + 1 ))
2538	if (( i == 1 ))
2539	then
2540	printf "\n\n *** execution of INPUT-commands:\n$striche"
2541	fi
2542	printf "\n >>> ${in_command[$i]}"
2543	eval ${in_command[$i]}
2544	if (( i == iic ))
2545	then
2546	printf "\n$striche\n"
2547	fi
2548	done
2549
2550
2551	# VERBLEIBENDE CPU-ZEIT BERECHNEN
2552	cpurest=${cpumax}.
2553
2554
2555	# PROGRAMMSTART
2556	printf "\n\n *** execution starts in directory\n \"`pwd`\"\n$striche\n"
2557	PATH=$PATH:$TEMPDIR
2558
2559	if [[ "$cond1" = debug \|\| "$cond2" = debug ]]
2560	then
2561	if [[ "$ENVIRONMENT" = BATCH ]]
2562	then
2563	printf "\n +++ debug is allowed in interactive mode only"
2564	locat=debug
2565	exit
2566	fi
2567	if [[ $localhost = decalpha ]]
2568	then
2569	dxladebug a.out
2570	elif [[ $localhost = ibmb \|\| $localhost = ibmh ]]
2571	then
2572
2573	# SETUP THE IBM MPI ENVIRONMENT
2574	export MP_SHARED_MEMORY=yes
2575	export AIXTHREADS_SCOPE=S
2576	export OMP_NUM_THREADS=$threads_per_task
2577	export AUTHSTATE=files
2578	export XLFRTEOPTS="nlwidth=132:err_recovery=no" # RECORD-LENGTH OF NAMELIST-OUTPUT
2579
2580	# FOLLOWING OPTIONS ARE MANDATORY FOR TOTALVIEW
2581	export MP_ADAPTER_USE=shared
2582	export MP_CPU_USE=multiple
2583	export MP_TIMEOUT=1200
2584
2585	unset MP_TASK_AFFINITY
2586
2587	# SO FAR, TOTALVIEW NEEDS HOSTFILE MECHANISM FOR EXECUTION
2588	#(( ii = 1 ))
2589	#while (( ii <= $numprocs ))
2590	#do
2591	# echo $localhost_realname >> hostfile
2592	# (( ii = ii + 1 ))
2593	#done
2594	#export MP_HOSTFILE=hostfile
2595
2596	if [[ "$LOADLBATCH" = yes ]]
2597	then
2598	totalview poe a.out $ROPTS
2599	else
2600	echo totalview poe -a a.out -procs $numprocs -rmpool 0 -nodes 1 $ROPTS
2601	export TVDSVRLAUNCHCMD=ssh
2602	totalview poe -a a.out -procs $numprocs -rmpool 0 -nodes 1 $ROPTS
2603	fi
2604	else
2605	printf "\n +++ no debug available on \"$localhost\" "
2606	printf "\n or not implemented in mrun so far"
2607	locat=debug
2608	exit
2609	fi
2610	else
2611	if [[ -n $numprocs ]]
2612	then
2613
2614	# RUNNING THE PROGRAM ON PARALLEL MACHINES
2615	if [[ $(echo $host \| cut -c1-3) = ibm ]]
2616	then
2617	# SETUP THE IBM MPI ENVIRONMENT
2618	export MP_SHARED_MEMORY=yes
2619	export AIXTHREAD_SCOPE=S
2620	export OMP_NUM_THREADS=$threads_per_task
2621	export XLSMPOPTS="spins=0:yields=0:stack=20000000"
2622	export AUTHSTATE=files
2623	export XLFRTEOPTS="nlwidth=132:err_recovery=no" # RECORD-LENGTH OF NAMELIST-OUTPUT
2624	# export MP_PRINTENV=yes
2625
2626	# TUNING-VARIABLEN ZUR VERBESSERUNG DER KOMMUNIKATION
2627	# ZEIGEN ABER DERZEIT (SEP 04, FEDERATION) KAUM WIRKUNG
2628	export MP_WAIT_MODE=poll
2629	[[ $node_usage = not_shared ]] && export MP_SINGLE_THREAD=yes
2630	# export MP_EAGER_LIMIT=65535
2631
2632	# # TESTWEISE FUER TURBOMPI (JAN 05)
2633	# export MPJ_MTAB=128
2634	# export MPJ_ALLTOALL=1
2635	# export MPJ_ALLTOALLV=1
2636
2637	if [[ "$LOADLBATCH" = yes ]]
2638	then
2639	printf "\n--- Control: OMP_NUM_THREADS = \"$OMP_NUM_THREADS\" \n"
2640	if [[ "$cond1" = hpmcount \|\| "$cond2" = hpmcount ]]
2641	then
2642	/opt/optibm/HPM_2_4_1/bin/hpmcount a.out $ROPTS
2643	else
2644	poe ./a.out $ROPTS
2645	fi
2646	else
2647	if [[ $localhost = ibmb \|\| $localhost = ibmh \|\| $localhost = ibms ]]
2648	then
2649	poe a.out -procs $numprocs -nodes 1 -rmpool 0 $ROPTS
2650	elif [[ $localhost = ibmy ]]
2651	then
2652	if [[ -f $hostfile ]]
2653	then
2654	cp $hostfile hostfile
2655	else
2656	(( ii = 1 ))
2657	while (( ii <= $numprocs ))
2658	do
2659	echo $localhost_realname >> hostfile
2660	(( ii = ii + 1 ))
2661	done
2662	fi
2663	export MP_HOSTFILE=hostfile
2664	./a.out -procs $tasks_per_node $ROPTS
2665	else
2666	if [[ "$host_file" = "" ]]
2667	then
2668	printf "\n +++ no hostfile given in configuration file"
2669	locat=config_file
2670	exit
2671	else
2672	eval host_file=$host_file
2673	fi
2674	export MP_HOSTFILE=$host_file
2675	poe a.out -procs $numprocs -tasks_per_node $numprocs $ROPTS
2676	fi
2677	fi
2678	elif [[ $host = nech \|\| $host = neck ]]
2679	then
2680	(( ii = nodes ))
2681	if [[ $ii = 1 ]]
2682	then
2683	export F_ERRCNT=0 # acceptable number of errors before program is stopped
2684	export MPIPROGINF=YES
2685	# export F_TRACE=YES\|FMT1\|FMT2 # output of ftrace informations to job protocol
2686	echo "*** execution on single node with mpirun"
2687	mpirun -np $numprocs ./a.out $ROPTS
2688	else
2689	(( i = 0 ))
2690	while (( i < ii ))
2691	do
2692	echo "-h $i -p $tasks_per_node -e ./mpi_exec_shell" >> multinode_config
2693	(( i = i + 1 ))
2694	done
2695
2696	echo "#!/bin/sh" > mpi_exec_shell
2697	echo " " >> mpi_exec_shell
2698	echo "set -u" >> mpi_exec_shell
2699	echo "F_ERRCNT=0" >> mpi_exec_shell
2700	echo "MPIPROGINV=YES" >> mpi_exec_shell
2701	echo "OMP_NUM_THREADS=$threads_per_task" >> mpi_exec_shell
2702	echo "cpurest=$cpurest" >> mpi_exec_shell
2703	echo "fname=$fname" >> mpi_exec_shell
2704	echo "localhost=$localhost" >> mpi_exec_shell
2705	echo "return_addres=$return_addres" >> mpi_exec_shell
2706	echo "return_username=$return_username" >> mpi_exec_shell
2707	echo "tasks_per_node=$tasks_per_node" >> mpi_exec_shell
2708	echo "write_binary=$write_binary" >> mpi_exec_shell
2709	echo "use_seperate_pe_for_dvrp_output=$use_seperate_pe_for_dvrp_output" >> mpi_exec_shell
2710	echo " " >> mpi_exec_shell
2711	echo "export F_ERRCNT" >> mpi_exec_shell
2712	echo "export MPIPROGINV" >> mpi_exec_shell
2713	echo "export OMP_NUM_THREADS" >> mpi_exec_shell
2714	echo "export cpurest" >> mpi_exec_shell
2715	echo "export fname" >> mpi_exec_shell
2716	echo "export localhost" >> mpi_exec_shell
2717	echo "export return_addres" >> mpi_exec_shell
2718	echo "export return_username" >> mpi_exec_shell
2719	echo "export tasks_per_node" >> mpi_exec_shell
2720	echo "export write_binary" >> mpi_exec_shell
2721	echo "export use_seperate_pe_for_dvrp_output" >> mpi_exec_shell
2722	echo " " >> mpi_exec_shell
2723	echo "exec ./a.out" >> mpi_exec_shell
2724
2725	chmod u+x mpi_exec_shell
2726	export MPIPROGINF=YES
2727	mpirun -f multinode_config &
2728	wait
2729
2730	fi
2731	elif [[ $(echo $host \| cut -c1-2) = lc && $host != lctit ]]
2732	then
2733
2734	# COPY HOSTFILE FROM SOURCE DIRECTORY OR CREATE IT, IF IT
2735	# DOES NOT EXIST
2736	if [[ -f $hostfile ]]
2737	then
2738	cp $hostfile hostfile
2739	else
2740	(( ii = 1 ))
2741	while (( ii <= $numprocs / $threads_per_task ))
2742	do
2743	echo $localhost_realname >> hostfile
2744	(( ii = ii + 1 ))
2745	done
2746	fi
2747	(( ii = $numprocs / $threads_per_task ))
2748	eval zeile=\"`head -n $ii hostfile`\"
2749	printf "\n *** running on: $zeile"
2750	export OMP_NUM_THREADS=$threads_per_task
2751	if [[ $threads_per_task != 1 ]]
2752	then
2753	printf "\n threads per task: $threads_per_task"
2754	fi
2755	if [[ $run_coupled_model = false ]]
2756	then
2757	printf "\n\n"
2758	mpiexec -machinefile hostfile -n $ii a.out $ROPTS
2759	else
2760	(( iii = ii / 2 ))
2761	printf "\n coupled run ($iii atmosphere, $iii ocean)"
2762	printf "\n\n"
2763	mpiexec -machinefile hostfile -n $iii -env coupling_mode atmosphere_to_ocean a.out $ROPTS &
2764	mpiexec -machinefile hostfile -n $iii -env coupling_mode ocean_to_atmosphere a.out $ROPTS &
2765	wait
2766	fi
2767
2768	# if [[ $scirocco = true ]]
2769	# then
2770	# mpiexec -machinefile hostfile -n $ii a.out $ROPTS
2771	# else
2772	# mpirun -machinefile hostfile -np $ii a.out $ROPTS
2773	# fi
2774
2775	elif [[ $host = decalpha ]]
2776	then
2777	dmpirun -np $numprocs a.out $ROPTS
2778	elif [[ $host = lctit ]]
2779	then
2780	export runfile=runfile.$kennung
2781
2782	echo "cd $PWD" > $runfile
2783	echo "export OMP_NUM_THREADS=$OMP_NUM_THREADS" >> $runfile
2784	echo "export cpurest=$cpurest" >> $runfile
2785	echo "export fname=$fname" >> $runfile
2786	echo "export localhost=$localhost" >> $runfile
2787	echo "export return_addres=$return_addres" >> $runfile
2788	echo "export return_username=$return_username" >> $runfile
2789	echo "export tasks_per_node=$tasks_per_node" >> $runfile
2790	echo "export write_binary=$write_binary" >> $runfile
2791	echo "export use_seperate_pe_for_dvrp_output=$use_seperate_pe_for_dvrp_output" >> $runfile
2792	echo "./a.out" >> $runfile
2793	chmod u+x $runfile
2794
2795	if [[ "$QUEUE" = interactive ]]
2796	then
2797	mpirun -np $numprocs a.out $ROPTS
2798	else
2799	(( mem_tsubame = 31.0 / $tasks_per_node ))
2800	echo "Memory for Tsubame in GB:", $mem_tsubame
2801	# n1ge -fore -g 1S060156 -mpi $numprocs -mem 4 -N palm -q $queue a.out $ROPTS
2802	/n1ge/TITECH_GRID/tools/bin/n1ge -fore -g $group_number -mpi ${numprocs}:$tasks_per_node -mem $mem_tsubame -N palm -rt 21600 -q $queue a.out $ROPTS
2803	fi
2804
2805	rm $runfile
2806	else
2807	mpprun -n $numprocs a.out $ROPTS
2808	fi
2809	[[ $? != 0 ]] && execution_error=true
2810
2811
2812	# PERFORMANCE-AUSWERTUNG MIT APPRENTICE
2813	if [[ "$cond1" = apprentice \|\| "$cond2" = apprentice ]]
2814	then
2815	apprentice
2816	fi
2817	else
2818	a.out $ROPTS
2819	fi
2820	fi
2821	if [[ $? != 0 \|\| $execution_error = true ]]
2822	then
2823
2824	# ABBRUCH BEI LAUFZEITFEHLER
2825	# [[ ! ( "$cond1" = debug \|\| "$cond2" = debug ) ]] && cat aout_output*
2826	printf "\n +++ runtime error occured"
2827	locat=execution
2828	exit
2829	else
2830	# [[ ! ( "$cond1" = debug \|\| "$cond2" = debug ) ]] && cat aout_output*
2831	printf "\n$striche\n *** execution finished \n"
2832	fi
2833
2834
2835
2836	# EVENTUELLE OUTPUT-KOMMANDOS ABARBEITEN
2837	(( i = 0 ))
2838	while (( i < ioc ))
2839	do
2840	(( i = i + 1 ))
2841	if (( i == 1 ))
2842	then
2843	printf "\n\n *** execution of OUTPUT-commands:\n$striche"
2844	fi
2845	printf "\n >>> ${out_command[$i]}"
2846	eval ${out_command[$i]}
2847	if (( i == ioc ))
2848	then
2849	printf "\n$striche\n"
2850	fi
2851	done
2852
2853
2854	# EVTL. INHALT DES AKTUELLEN VERZEICHNISSES AUSGEBEN
2855	if [[ $do_trace = true ]]
2856	then
2857	printf "\n\n"
2858	ls -al
2859	fi
2860
2861
2862
2863	# OUTPUT-DATEIEN AN IHRE ZIELORTE KOPIEREN
2864	(( i = 0 ))
2865	while (( i < iout ))
2866	do
2867	(( i = i + 1 ))
2868	if (( i == 1 ))
2869	then
2870	printf "\n\n *** saving OUTPUT-files:\n$striche"
2871	fi
2872
2873	# PRUEFEN, OB EINZELDATEI ODER DATEI PRO PROZESSOR
2874	files_for_pes=false; filetyp=file
2875	if [[ "${actionout[$i]}" = pe && -n $numprocs ]]
2876	then
2877	files_for_pes=true; filetyp=directory
2878	actionout[$i]=""
2879	elif [[ "${actionout[$i]}" = pe && ! -n $numprocs ]]
2880	then
2881	actionout[$i]=""
2882	elif [[ "${actionout[$i]}" = arpe && -n $numprocs ]]
2883	then
2884	files_for_pes=true; filetyp=directory
2885	actionout[$i]="ar"
2886	elif [[ "${actionout[$i]}" = arpe && ! -n $numprocs ]]
2887	then
2888	actionout[$i]="ar"
2889	elif [[ "${actionout[$i]}" = flpe && -n $numprocs ]]
2890	then
2891	files_for_pes=true; filetyp=directory
2892	actionout[$i]="fl"
2893	elif [[ "${actionout[$i]}" = flpe && ! -n $numprocs ]]
2894	then
2895	actionout[$i]="fl"
2896	elif [[ "${actionout[$i]}" = trpe && -n $numprocs ]]
2897	then
2898	files_for_pes=true; filetyp=directory
2899	actionout[$i]="tr"
2900	elif [[ "${actionout[$i]}" = trpe && ! -n $numprocs ]]
2901	then
2902	actionout[$i]="tr"
2903	fi
2904
2905	if [[ ! -f ${localout[$i]} && $files_for_pes = false ]]
2906	then
2907	printf "\n +++ temporary OUTPUT-file ${localout[$i]} does not exist\n"
2908	elif [[ ! -f ${localout[$i]}/_0000 && $files_for_pes = true ]]
2909	then
2910	printf "\n +++ temporary OUTPUT-file ${localout[$i]}/.... does not exist\n"
2911	else
2912
2913
2914	# KOPIEREN PER FTP/SCP (IMMER IM BINAERMODUS, -M: FALLS ZIELKATALOG
2915	# NICHT VORHANDEN, WIRD VERSUCHT, IHN ANZULEGEN), ABER NUR BEI
2916	# REMOTE-RECHNUNGEN
2917	if [[ "${actionout[$i]}" = tr ]]
2918	then
2919	if [[ $localhost != $fromhost ]]
2920	then
2921	if [[ $files_for_pes = false ]]
2922	then
2923	cps=""
2924	cst=""
2925	else
2926	cps=-c
2927	cst="/"
2928	fi
2929	if [[ $localhost = ibmh \|\| $localhost = ibmb \|\| $localhost = nech ]]
2930	then
2931
2932	# TRANSFER IN EIGENSTAENDIGEM JOB
2933	# ZUERST KOPIE DER DATEI INS TEMPORAERE DATENVERZEICHNIS
2934	[[ ! -d $tmp_data_catalog/TRANSFER ]] && mkdir -p $tmp_data_catalog/TRANSFER
2935	file_to_transfer=${fname}_${localout[$i]}_to_transfer_$kennung
2936	if [[ $files_for_pes = false ]]
2937	then
2938	ln -f ${localout[$i]} $tmp_data_catalog/TRANSFER/$file_to_transfer
2939	else
2940	mkdir $tmp_data_catalog/TRANSFER/$file_to_transfer
2941	ln ${localout[$i]}/* $tmp_data_catalog/TRANSFER/$file_to_transfer
2942	fi
2943
2944	echo "set -x" > transfer_${localout[$i]}
2945	echo "cd $tmp_data_catalog/TRANSFER" >> transfer_${localout[$i]}
2946
2947	printf "\n >>> OUTPUT: ${localout[$i]}$cst by SCP in seperate job to"
2948	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}$cst"
2949	printf "\n or higher cycle\n"
2950	echo "batch_scp $cps -b -m -u $return_username $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
2951
2952	echo "[[ \$? = 0 ]] && rm $file_to_transfer" >> transfer_${localout[$i]}
2953
2954	if [[ $localhost = nech ]]
2955	then
2956	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 900 transfer_${localout[$i]}
2957	else
2958	if [[ "$LOGNAME" = b323013 ]]
2959	then
2960	subjob -v -q c1 -X 0 -m 1000 -t 900 transfer_${localout[$i]}
2961	else
2962	subjob -d -v -q c1 -X 0 -m 1000 -t 900 transfer_${localout[$i]}
2963	fi
2964	fi
2965
2966	else
2967
2968	# TRANSFER INNERHALB DIESES JOBS
2969	transfer_failed=false
2970	printf "\n >>> OUTPUT: ${localout[$i]}$cst by SCP to"
2971	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}$cst\n"
2972	batch_scp $cps -b -m -u $return_username $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
2973	[[ $? != 0 ]] && transfer_failed=true
2974
2975	# BEI FEHLGESCHLAGENEM TRANSFER SICHERUNGSKOPIE AUF
2976	# LOKALER MASCHINE ANLEGEN
2977	if [[ $transfer_failed = true ]]
2978	then
2979	printf " +++ transfer failed. Trying to save a copy on the local host under:\n"
2980	printf " ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung\n"
2981
2982	# ERSTMAL PRUEFEN, OB VERZEICHNIS EXISTIERT. GEGEBENENFALLS
2983	# ANLEGEN.
2984	eval local_catalog=${pathout[$i]}
2985	if [[ ! -d $local_catalog ]]
2986	then
2987	printf " *** local directory does not exist. Trying to create:\n"
2988	printf " $local_catalog \n"
2989	mkdir -p $local_catalog
2990	fi
2991	eval cp ${localout[$i]} ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung
2992	transfer_problems=true
2993	fi
2994	fi
2995	else
2996
2997	# WERTZUWEISUNG, SO DASS WEITER UNTEN NUR KOPIERT WIRD
2998	actionout[$i]=""
2999	fi
3000	fi
3001
3002
3003	# APPEND PER FTP/SCP (IMMER IM BINAERMODUS, -M: FALLS ZIELKATALOG
3004	# NICHT VORHANDEN, WIRD VERSUCHT, IHN ANZULEGEN), ABER NUR BEI
3005	# REMOTE-RECHNUNGEN
3006	if [[ "${actionout[$i]}" = tra ]]
3007	then
3008	if [[ $localhost != $fromhost ]]
3009	then
3010	if [[ $localhost = ibmh \|\| $localhost = ibmb \|\| $localhost = nech ]]
3011	then
3012
3013	# TRANSFER IN EIGENSTAENDIGEM JOB
3014	# ZUERST KOPIE DER DATEI INS TEMPORAERE DATENVERZEICHNIS
3015	[[ ! -d $tmp_data_catalog/TRANSFER ]] && mkdir -p $tmp_data_catalog/TRANSFER
3016	file_to_transfer=${fname}_${localout[$i]}_to_transfer_$kennung
3017	ln -f ${localout[$i]} $tmp_data_catalog/TRANSFER/$file_to_transfer
3018
3019	echo "set -x" > transfer_${localout[$i]}
3020	echo "cd $tmp_data_catalog/TRANSFER" >> transfer_${localout[$i]}
3021
3022	printf "\n >>> OUTPUT: ${localout[$i]} append by SCP in seperate job to"
3023	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}"
3024	printf "\n or higher cycle\n"
3025	echo "batch_scp -A -b -m -u $return_username $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
3026
3027	echo "[[ \$? = 0 ]] && rm $file_to_transfer" >> transfer_${localout[$i]}
3028
3029	if [[ $localhost = nech ]]
3030	then
3031	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 900 transfer_${localout[$i]}
3032	else
3033	if [[ $LOGNAME = b323013 ]]
3034	then
3035	subjob -v -q c1 -X 0 -m 1000 -t 900 transfer_${localout[$i]}
3036	else
3037	subjob -d -v -q c1 -X 0 -m 1000 -t 900 transfer_${localout[$i]}
3038	fi
3039	fi
3040
3041	else
3042
3043	# TRANSFER INNERHALB DIESES JOBS
3044	transfer_failed=false
3045	printf "\n >>> OUTPUT: ${localout[$i]} append by SCP to"
3046	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}\n"
3047	batch_scp -A -b -m -u $return_username $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
3048	[[ $? != 0 ]] && transfer_failed=true
3049
3050	# BEI FEHLGESCHLAGENEM TRANSFER SICHERUNGSKOPIE AUF
3051	# LOKALER MASCHINE ANLEGEN
3052	if [[ $transfer_failed = true ]]
3053	then
3054	printf " +++ transfer failed. Trying to save a copy on the local host under:\n"
3055	printf " ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung\n"
3056
3057	# ERSTMAL PRUEFEN, OB VERZEICHNIS EXISTIERT. GEGEBENENFALLS
3058	# ANLEGEN
3059	eval local_catalog=${pathout[$i]}
3060	if [[ ! -d $local_catalog ]]
3061	then
3062	printf " *** local directory does not exist. Trying to create:\n"
3063	printf " $local_catalog \n"
3064	mkdir -p $local_catalog
3065	fi
3066
3067	eval cp ${localout[$i]} ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung
3068	transfer_problems=true
3069	fi
3070	fi
3071	else
3072
3073	# WERTZUWEISUNG, SO DASS WEITER UNTEN NUR APPEND AUF
3074	# LOKALER MASCHINE DURCHGEFUEHRT WIRD
3075	actionout[$i]=a
3076	fi
3077	fi
3078
3079
3080	# OUTPUT-DATEI FUER EINEN FORTSETZUNGSLAUF. DATEI WIRD PER
3081	# LINK AUF DEN TEMPORAEREN DATENKATALOG GELEGT. OPTION -f WIRD
3082	# VERWENDET, FALLS DORT NOCH EINE DATEI GLEICHEN NAMENS VORHANDEN
3083	# SEIN SOLLTE. ANSCHLIESSEND WIRD SEINE ARCHIVIERUNG ANGESTOSSEN
3084	if [[ "${actionout[$i]}" = fl ]]
3085	then
3086	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
3087	chmod g+rx $tmp_data_catalog
3088	if [[ $files_for_pes = false ]]
3089	then
3090	printf "\n >>> OUTPUT: ${localout[$i]} to"
3091	printf "\n $tmp_data_catalog/${frelout[$i]} (temporary data catalog)\n"
3092	ln -f ${localout[$i]} $tmp_data_catalog/${frelout[$i]}
3093	else
3094	printf "\n >>> OUTPUT: ${localout[$i]}/.... to"
3095	printf "\n $tmp_data_catalog/${frelout[$i]} (temporary data catalog)\n"
3096	mkdir $tmp_data_catalog/${frelout[$i]}
3097	ln -f ${localout[$i]}/* $tmp_data_catalog/${frelout[$i]}
3098	fi
3099
3100
3101	# ARCHIVIERUNGSJOB WIRD ERZEUGT UND ABGESCHICKT
3102	if [[ $store_on_archive_system = true ]]
3103	then
3104
3105	if [[ $archive_system = asterix ]]
3106	then
3107	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3108	if [[ $files_for_pes = false ]]
3109	then
3110	echo "stageout ${frelout[$i]} > STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3111	else
3112	echo "stageout -t ${frelout[$i]} > STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3113	fi
3114	echo "cat STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3115	echo "if [[ \$(grep -c \"st.msg:150\" STAGE_OUTPUT${i}_$kennung) != 0 ]]" >> archive_${frelout[$i]}
3116	echo "then" >> archive_${frelout[$i]}
3117	echo " do_stageout=false" >> archive_${frelout[$i]}
3118	echo "else" >> archive_${frelout[$i]}
3119	echo " echo \" +++ $filetyp ${frelout[$i]} could not be stored on archive-system\" " >> archive_${frelout[$i]}
3120	echo " cat /dev/null > ~/job_queue/ARCHIVE_ERROR_$fname" >> archive_${frelout[$i]}
3121	echo " cat STAGE_OUTPUT${i}_$kennung > ~/job_queue/archive_${frelout[$i]}_error" >> archive_${frelout[$i]}
3122	echo " echo \" *** $filetyp ${frelout[$i]} will be copied to \$WORK as backup\" " >> archive_${frelout[$i]}
3123	if [[ $files_for_pes = false ]]
3124	then
3125	echo " cp ${frelout[$i]} \$WORK" >> archive_${frelout[$i]}
3126	else
3127	echo " cp -r ${frelout[$i]} \$WORK/${frelout[$i]}" >> archive_${frelout[$i]}
3128	fi
3129	echo " echo \" *** $filetyp ${frelout[$i]} saved\" " >> archive_${frelout[$i]}
3130	echo "fi" >> archive_${frelout[$i]}
3131	echo "rm STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3132	elif [[ $archive_system = DMF ]]
3133	then
3134	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3135	if [[ $files_for_pes = false ]]
3136	then
3137	printf "\n +++ archiving of single files impossible with $archive_system !\n"
3138	locat=DMF
3139	exit
3140	else
3141	# FUER RECHNER IN JUELICH. DORT KOENNTEN AUCH
3142	# EINZELNE DATEIEN GESICHERT WERDEN (SPAETER KORR.)
3143	echo "rm -rf \$ARCHIVE/${frelout[$i]}" >> archive_${frelout[$i]}
3144	echo "cp -r ${frelout[$i]} \$ARCHIVE" >> archive_${frelout[$i]}
3145	fi
3146	elif [[ $archive_system = tivoli ]]
3147	then
3148	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3149	if [[ $files_for_pes = false ]]
3150	then
3151	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3152	echo "set -x" >> archive_${frelout[$i]}
3153	echo "rm -rf \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3154	echo "cp ${frelout[$i]} \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3155	else
3156
3157	echo "set -x" >> archive_${frelout[$i]}
3158	echo "rm -rf \$PERM/${frelout[$i]}/*" >> archive_${frelout[$i]}
3159	echo "[[ ! -d \$PERM/${frelout[$i]} ]] && mkdir $PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3160	cd $tmp_data_catalog
3161	all_files=`ls -1 ${frelout[$i]}/*`
3162	cd - > /dev/null
3163	(( inode = 0 ))
3164	(( tp1 = tasks_per_node + 1 ))
3165	while (( inode < nodes ))
3166	do
3167	# echo "*** all_files = \"$all_files\" "
3168	files=`echo $all_files \| cut -d" " -f1-$tasks_per_node`
3169	all_files=`echo $all_files \| cut -d" " -f$tp1-`
3170	# echo "*** tasks_per_node = \"$tasks_per_node\" "
3171	# echo "*** files = \"$files\" "
3172	# echo "*** all_files = \"$all_files\" "
3173	echo "tar cvf \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar $files" >> archive_${frelout[$i]}
3174	echo "dsmc incremental \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar" >> archive_${frelout[$i]}
3175	echo "dsmmigrate \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar" >> archive_${frelout[$i]}
3176	(( inode = inode + 1 ))
3177	done
3178	# echo "rm -rf \$PERM/${frelout[$i]}.tar" >> archive_${frelout[$i]}
3179	# echo "tar cvf \$PERM/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
3180	fi
3181	elif [[ $archive_system = ut ]]
3182	then
3183	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3184	if [[ $files_for_pes = false ]]
3185	then
3186	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3187	echo "set -x" >> archive_${frelout[$i]}
3188	echo "rm -rf \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3189	echo "cp ${frelout[$i]} \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3190	else
3191
3192	echo "set -x" >> archive_${frelout[$i]}
3193	echo "rm -rf \$UT/${frelout[$i]}/*" >> archive_${frelout[$i]}
3194	echo "[[ ! -d \$UT/${frelout[$i]} ]] && mkdir $UT/${frelout[$i]}" >> archive_${frelout[$i]}
3195	cd $tmp_data_catalog
3196	all_files=`ls -1 ${frelout[$i]}/*`
3197	cd - > /dev/null
3198	(( inode = 0 ))
3199	(( tp1 = tasks_per_node + 1 ))
3200	while (( inode < nodes ))
3201	do
3202	files=`echo $all_files \| cut -d" " -f1-$tasks_per_node`
3203	all_files=`echo $all_files \| cut -d" " -f$tp1-`
3204	echo "tar cvf \$UT/${frelout[$i]}/${frelout[$i]}.node_$inode.tar $files" >> archive_${frelout[$i]}
3205	(( inode = inode + 1 ))
3206	done
3207	fi
3208	elif [[ $archive_system = none ]]
3209	then
3210	printf " +++ archiving on $localhost not available!\n"
3211	fi
3212
3213	if [[ $archive_system != none ]]
3214	then
3215	if [[ $localhost = ibmh \|\| $localhost = ibmb ]]
3216	then
3217	# subjob -d -v -q cdata -X 0 -m 1000 -t 43200 archive_${frelout[$i]}
3218	subjob -v -q cdata -X 0 -m 1000 -t 43200 archive_${frelout[$i]}
3219	elif [[ $localhost = nech ]]
3220	then
3221	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 7200 archive_${frelout[$i]}
3222	fi
3223	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
3224	fi
3225	else
3226	printf " +++ caution: option -A is switched on. No archiving on $archive_system!\n"
3227	fi
3228
3229
3230	# LEERDATEI IM BENUTZERVERZEICHNIS ANLEGEN, DAMIT BEKANNT IST,
3231	# WIE DIE HOECHSTE ZYKLUSNUMMER AUF DEM ARCHIV-SYSTEM LAUTET
3232	if [[ $files_for_pes = false ]]
3233	then
3234	cat /dev/null > ${pathout[$i]}
3235	else
3236	mkdir -p ${pathout[$i]}
3237	fi
3238
3239	fi
3240
3241
3242	# KOPIEREN AUF LOKALER MASCHINE ZUM ARCHIV-SYSTEM
3243	# AUSSERDEM MUSS LEERDATEI ANGELEGT WERDEN, DAMIT BEKANNT IST,
3244	# WIE DIE HOECHSTE ZYKLUSNUMMER AUF DEM ARCHIV-SYSTEM LAUTET
3245	# FALLS IRGENDEINE (VON MEHREREN) ARCHIVIERUNGEN SCHIEF GEHT,
3246	# WIRD FLAG GESETZT UND BLEIBT AUCH BEI WEITEREN ORDNUNGS-
3247	# GEMAESSEN ARCHIVIERUNGEN GESETZT
3248	if [[ "${actionout[$i]}" = ar ]]
3249	then
3250	if [[ $files_for_pes = false ]]
3251	then
3252	printf "\n >>> OUTPUT: ${localout[$i]} to"
3253	printf "\n ${pathout[$i]}"
3254	printf "\n File will be copied to archive-system ($archive_system) !\n"
3255	else
3256	printf "\n >>> OUTPUT: ${localout[$i]}/_.... to"
3257	printf "\n ${pathout[$i]}"
3258	printf "\n Directory will be copied to archive-system ($archive_system) !\n"
3259	fi
3260	mv ${localout[$i]} ${frelout[$i]}
3261
3262	file_saved=false
3263
3264	if [[ $archive_system = asterix ]]
3265	then
3266	do_stageout=true
3267	(( stageout_anz = 0 ))
3268	while [[ $do_stageout = true ]]
3269	do
3270	if [[ $files_for_pes = false ]]
3271	then
3272	stageout ${frelout[$i]} > STAGE_OUTPUT
3273	else
3274	stageout -t ${frelout[$i]} > STAGE_OUTPUT
3275	fi
3276	cat STAGE_OUTPUT
3277	if [[ $(grep -c "st.msg:150" STAGE_OUTPUT) != 0 ]]
3278	then
3279	file_saved=true
3280	do_stageout=false
3281	else
3282	if [[ $files_for_pes = false ]]
3283	then
3284	printf "\n +++ file ${frelout[$i]} could not be saved on archive-system"
3285	else
3286	printf "\n +++ directory ${frelout[$i]} could not be saved on archive-system"
3287	fi
3288	(( stageout_anz = stageout_anz + 1 ))
3289	if (( stageout_anz == 10 ))
3290	then
3291	printf "\n +++ stoped after 10 unsuccessful tries!"
3292	archive_save=false
3293	do_stageout=false
3294	else
3295	printf "\n *** new try to store on archive after 15 min:"
3296	sleep 900
3297	fi
3298	fi
3299	done
3300	elif [[ $archive_system = DMF ]]
3301	then
3302	if [[ $files_for_pes = false ]]
3303	then
3304	printf "\n +++ archiving of single files impossible on $archive_system!\n"
3305	locat=DMF
3306	exit
3307	else
3308	rm -rf $ARCHIVE/${frelout[$i]}
3309	cp -r ${frelout[$i]} $ARCHIVE
3310	fi
3311	file_saved=true
3312	elif [[ $archive_system = tivoli ]]
3313	then
3314	# ARCHIVIERUNG NUR PER BATCH-JOB MOEGLICH
3315	# DATEI MUSS ZWISCHENZEITLICH INS TEMPORAERE DATENVERZEICHNIS
3316	# GELEGT WERDEN
3317	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
3318	chmod g+rx $tmp_data_catalog
3319	if [[ $files_for_pes = false ]]
3320	then
3321	ln -f ${frelout[$i]} $tmp_data_catalog/${frelout[$i]}
3322	else
3323	mkdir $tmp_data_catalog/${frelout[$i]}
3324	ln -f ${frelout[$i]}/* $tmp_data_catalog/${frelout[$i]}
3325	fi
3326
3327	# BATCH JOB GENERIEREN UND ABSCHICKEN; DATEI MUSS WIEDER
3328	# AUS TEMPORAEREM DATENVERZEICHNIS ENTFERNT WERDEN
3329	echo "cd $tmp_data_catalog" > archive_${frelout[$i]}
3330	if [[ $files_for_pes = false ]]
3331	then
3332	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3333	echo "rm -rf \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3334	echo "cp ${frelout[$i]} \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3335	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3336	else
3337	echo "rm -rf \$PERM/${frelout[$i]}.tar" >> archive_${frelout[$i]}
3338	echo "tar cvf \$PERM/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
3339	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3340	fi
3341
3342	subjob -v -d -q cdata -X 0 -m 1000 -t 43200 archive_${frelout[$i]}
3343	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
3344	file_saved=true
3345
3346	elif [[ $archive_system = ut ]]
3347	then
3348	# ARCHIVIERUNG NUR PER BATCH-JOB MOEGLICH
3349	# DATEI MUSS ZWISCHENZEITLICH INS TEMPORAERE DATENVERZEICHNIS
3350	# GELEGT WERDEN
3351	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
3352	chmod g+rx $tmp_data_catalog
3353	if [[ $files_for_pes = false ]]
3354	then
3355	ln -f ${frelout[$i]} $tmp_data_catalog/${frelout[$i]}
3356	else
3357	mkdir $tmp_data_catalog/${frelout[$i]}
3358	ln -f ${frelout[$i]}/* $tmp_data_catalog/${frelout[$i]}
3359	fi
3360
3361	# BATCH JOB GENERIEREN UND ABSCHICKEN; DATEI MUSS WIEDER
3362	# AUS TEMPORAEREM DATENVERZEICHNIS ENTFERNT WERDEN
3363	echo "cd $tmp_data_catalog" > archive_${frelout[$i]}
3364	if [[ $files_for_pes = false ]]
3365	then
3366	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3367	echo "rm -rf \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3368	echo "cp ${frelout[$i]} \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3369	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3370	else
3371	echo "rm -rf \$UT/${frelout[$i]}.tar" >> archive_${frelout[$i]}
3372	echo "tar cvf \$UT/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
3373	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3374	fi
3375
3376	subjob -v -c /pf/b/$usern/job_queue -d -q pp -X 0 -m 1000 -t 7200 archive_${frelout[$i]}
3377	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
3378	file_saved=true
3379
3380	else
3381	printf "\n +++ archive_system=\"$archive_system\" archiving impossible!"
3382	archive_save=false
3383	fi
3384	if [[ $file_saved = true ]]
3385	then
3386	if [[ $files_for_pes = false ]]
3387	then
3388	cat /dev/null > ${pathout[$i]}
3389	else
3390	mkdir -p ${pathout[$i]}
3391	fi
3392	fi
3393	fi
3394
3395	# APPEND AUF LOKALER MASCHINE
3396	if [[ "${actionout[$i]}" = "a" ]]
3397	then
3398	printf "\n >>> OUTPUT: ${localout[$i]} append to ${pathout[$i]}\n"
3399	cat ${localout[$i]} >> ${pathout[$i]}
3400	fi
3401
3402	# KOPIEREN AUF LOKALER MASCHINE
3403	# ES MUSS KOPIERT WERDEN, DA MOVE NICHT UEBER FILESYSTEM HINAUS MOEGLICH
3404	if [[ "${actionout[$i]}" = "" && $files_for_pes = false ]]
3405	then
3406
3407	# KOPIEREN AUF EINPROZESSORMASCHINE
3408	if [[ "${extout[$i]}" != " " && "${extout[$i]}" != "" ]]
3409	then
3410	printf "\n >>> OUTPUT: ${localout[$i]} to ${pathout[$i]}.${extout[$i]}\n"
3411	cp ${localout[$i]} ${pathout[$i]}.${extout[$i]}
3412	else
3413	printf "\n >>> OUTPUT: ${localout[$i]} to ${pathout[$i]}\n"
3414	cp ${localout[$i]} ${pathout[$i]}
3415	fi
3416
3417	elif [[ "${actionout[$i]}" = "" && $files_for_pes = true ]]
3418	then
3419
3420	# DIE DEN PROZESSOREN EINES PARALLELRECHNERS ZUGEHOERIGEN
3421	# DATEIEN WERDEN ERST IN EINEM KATALOG GESAMMELT UND DIESER
3422	# WIRD DANN KOPIERT
3423	# PER MOVE UMBENANNT WERDEN
3424	printf "\n >>> OUTPUT: ${localout[$i]}/_.... to ${pathout[$i]}\n"
3425	cp -r ${localout[$i]} ${pathout[$i]}
3426
3427	fi
3428	fi
3429	done
3430	if (( i != 0 ))
3431	then
3432	if [[ $transfer_problems = true ]]
3433	then
3434	printf "\n$striche\n *** OUTPUT-files saved"
3435	printf "\n +++ WARNING: some data transfers failed! \n"
3436	else
3437	printf "\n$striche\n *** all OUTPUT-files saved \n"
3438	fi
3439	fi
3440
3441
3442	# EVENTUELL FOLGEJOB STARTEN
3443	# DATEI CONTINUE_RUN MUSS VOM BENUTZERPROGRAMM AUS ERZEUGT WERDEN
3444	if [[ -f CONTINUE_RUN ]]
3445	then
3446
3447	if [[ $archive_save = true ]]
3448	then
3449
3450	# ZUERST IN MRUN-AUFRUF OPTIONEN FUER FORTSETZUNGSLAUF, FUER
3451	# STILLES ABARBEITEN (OHNE INTERAKTIVE RUECKFAGEN) UND FUER
3452	# BATCH-BETRIEB (NUR WICHTIG, FALLS BATCH AUF LOKALER MASCHINE
3453	# DURCHGEFUEHRT WERDEN SOLL) EINFUEGEN, FALLS NICHT BEREITS VOR-
3454	# HANDEN
3455	[[ $(echo $mc \| grep -c "\-C") = 0 ]] && mc="$mc -C"
3456	[[ $(echo $mc \| grep -c "\-v") = 0 ]] && mc="$mc -v"
3457	[[ $(echo $mc \| grep -c "\-b") = 0 ]] && mc="$mc -b"
3458	if [[ $(echo $mc \| grep -c "#") != 0 ]]
3459	then
3460	mc=`echo $mc \| sed 's/#/f/g'`
3461	fi
3462
3463
3464	# JOB STARTEN
3465	printf "\n\n *** initiating restart-run on \"$return_addres\" using command:\n"
3466	echo " $mc"
3467	printf "\n$striche\n"
3468	if [[ $localhost != $fromhost ]]
3469	then
3470
3471	if [[ $localhost = nech \|\| $localhost = ibmb \|\| $localhost = ibmh \|\| $localhost = ibms \|\| $localhost = lctit ]]
3472	then
3473	echo "*** ssh will be used to initiate restart-runs!"
3474	echo " return_addres=\"$return_addres\" "
3475	echo " return_username=\"$return_username\" "
3476	if [[ $return_addres = 172.20.25.41 ]]
3477	then
3478	# WORKAROUND AUF SCIROCCO AM TIT
3479	print "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc " \| ssh $return_addres -l $return_username
3480	else
3481	ssh $return_addres -l $return_username "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc "
3482	fi
3483	else
3484	printf "\n +++ no restart mechanism available for host \"$localhost\" "
3485	locat=restart; exit
3486	fi
3487
3488	# WARTEN, DAMIT SICH RESTART JOB IN QUEUE EINREIHEN KANN, BEVOR
3489	# DER AKTUELLE JOB ENDET
3490	sleep 30
3491
3492	else
3493
3494	# BEI RECHNUNGEN AUF LOKALER MASCHINE KANN MRUN DIREKT AUFGE-
3495	# RUFEN WERDEN, AUSSER AUF lcfimm
3496	cd $LOCAL_PWD
3497	if [[ $localhost = lcfimm ]]
3498	then
3499	ssh $return_addres -l $return_username "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc "
3500	else
3501	eval $mc # ' MUESSEN AUSGEWERTET WERDEN
3502	fi
3503	cd - > /dev/null
3504	fi
3505	printf "\n$striche\n *** restart-run initiated \n"
3506
3507
3508	# EVENTUELL INPUT-DATEIEN, DIE VON TEMPORAEREM DATENVERZEICHNIS
3509	# GEHOLT WORDEN SIND, LOESCHEN
3510	(( i = 0 ))
3511	while (( i < iin ))
3512	do
3513	(( i = i + 1 ))
3514	if [[ "${got_tmp[$i]}" = true && $keep_data_from_previous_run = false ]]
3515	then
3516	rm -r $tmp_data_catalog/${frelin[$i]}
3517	fi
3518	done
3519
3520	else
3521
3522	printf "\n +++ no restart-run possible, since errors occured"
3523	printf "\n during the archive process"
3524	fi
3525
3526	fi
3527
3528
3529
3530	# EVTL. EMAIL-BENACHRICHTIGUNG UEBER ABGESCHLOSSENEN LAUF
3531	if [[ "$email_notification" != "" ]]
3532	then
3533
3534	if [[ $localhost != $fromhost ]]
3535	then
3536	if [[ -f CONTINUE_RUN ]]
3537	then
3538	echo "PALM restart run necessary" > email_text
3539	echo "description header of actual run:" >> email_text
3540	cat CONTINUE_RUN >> email_text
3541	echo "mrun-command to restart:" >> email_text
3542	echo "$mc" >> email_text
3543	else
3544	echo "PALM run with base filename \"$fname\" on host \"$localhost\" finished" > email_text
3545	fi
3546	mail $email_notification < email_text
3547	printf "\n *** email notification sent to \"$email_notification\" "
3548	fi
3549	fi
3550
3551
3552
3553	# ALLE ARBEITEN BEENDET. TEMPORAERER KATALOG KANN GELOESCHT WERDEN
3554	cd $HOME
3555	[[ $delete_temporary_catalog = true ]] && rm -rf $TEMPDIR
3556
3557	else
3558
3559
3560	# FALLS AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL, WERDEN JETZT ENTSPRE-
3561	# CHENDE AKTIONEN DURCHGEFUEHRT
3562
3563	# MRUN-BEFEHL FUER REMOTE-MASCHINE ZUSAMMENSTELLEN
3564	mrun_com="$mrun_script_name -a $afname -c $config_file -d $fname -h $host -H $fromhost -m $memory -t $cpumax -q $queue -R $return_addres -U $return_username -u $remote_username"
3565	[[ "$cpp_opts" != "" ]] && mrun_com=${mrun_com}" -D \"$cpp_opts\""
3566	[[ "$global_revision" != "" ]] && mrun_com=${mrun_com}" -G \"$global_revision\""
3567	[[ $group_number != none ]] && mrun_com=${mrun_com}" -g $group_number"
3568	[[ $do_compile = true ]] && mrun_com=${mrun_com}" -s \"$source_list\""
3569	[[ "$input_list" != "" ]] && mrun_com=${mrun_com}" -i \"$input_list\""
3570	[[ $ignore_archive_error = true ]] && mrun_com=${mrun_com}" -I"
3571	[[ $keep_data_from_previous_run = true ]] && mrun_com=${mrun_com}" -k"
3572	[[ "$additional_conditions" != "" ]] && mrun_com=${mrun_com}" -K \"$additional_conditions\""
3573	# [[ "$makefile" != "$source_path/Makefile" ]] && mrun_com=${mrun_com}" -M \"$makefile\""
3574	[[ "$output_list" != "" ]] && mrun_com=${mrun_com}" -o \"$output_list\""
3575	[[ "$read_from_config" = false ]] && mrun_com=${mrun_com}" -S"
3576	[[ $do_trace = true ]] && mrun_com=${mrun_com}" -x"
3577	[[ "$numprocs" != "" ]] && mrun_com=${mrun_com}" -X $numprocs"
3578	if [[ $use_openmp = true ]]
3579	then
3580	mrun_com=${mrun_com}" -O"
3581	[[ "$tasks_per_node" != "" ]] && mrun_com=${mrun_com}" -T $threads_per_task"
3582	else
3583	[[ "$tasks_per_node" != "" ]] && mrun_com=${mrun_com}" -T $tasks_per_node"
3584	fi
3585	[[ $store_on_archive_system = false ]] && mrun_com=${mrun_com}" -A"
3586	[[ $package_list != "" ]] && mrun_com=${mrun_com}" -p \"$package_list\""
3587	[[ $return_password != "" ]] && mrun_com=${mrun_com}" -P $return_password"
3588	[[ $delete_temporary_catalog = false ]] && mrun_com=${mrun_com}" -B"
3589	[[ $node_usage != default && $node_usage != sla3 ]] && mrun_com=${mrun_com}" -n $node_usage"
3590	[[ $run_coupled_model = true ]] && mrun_com=${mrun_com}" -Y"
3591	if [[ $do_remote = true ]]
3592	then
3593	printf "\n>>>> MRUN-command on execution host:\n>>>> $mrun_com \n"
3594	fi
3595
3596
3597	# ZUSAMMENSTELLUNG DES JOBSCRIPTS AUF DATEI jobfile
3598	jobfile=jobfile.$RANDOM
3599
3600
3601	# TEMPORAERES VERZEICHNIS GENERIEREN UND NACH DORT WECHSELN
3602	echo "mkdir $TEMPDIR" >> $jobfile
3603	echo "cd $TEMPDIR" >> $jobfile
3604
3605
3606	# EVENTUELL FEHLERVERFOLGUNG AKTIVIEREN
3607	if [[ $do_trace = true ]]
3608	then
3609	echo "set -x" >> $jobfile
3610	else
3611	echo "set +vx" >> $jobfile
3612	fi
3613
3614
3615	# ABSPEICHERN DER QUELLTEXTE (NUR FALLS UEBERSETZT WERDEN SOLL)
3616	# SOWIE GEGEBENENFALLS DES MAKEFILES
3617	if [[ $do_compile = true ]]
3618	then
3619
3620	source_catalog=SOURCES_FOR_RUN_$fname
3621
3622	# UNTERVERZEICHNIS FUER QUELLTEXTE UND MAKEFILE ANLEGEN
3623	# MRUN WIRD DIESES VRZEICHNIS UEBER ENVIRONMENT VARIABLE
3624	# MITGETEILT (UEBERSTEUERT ANGABE IN KONFIGURATIONSDATEI)
3625	echo "mkdir SOURCES_FOR_RUN_$fname" >> $jobfile
3626	echo "export SOURCES_COMPLETE=true" >> $jobfile
3627	echo "cd SOURCES_FOR_RUN_$fname" >> $jobfile
3628
3629	for filename in $source_list
3630	do
3631	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
3632	echo "cat > $filename << \"%END%\"" >> $jobfile
3633	cat $source_catalog/$filename >> $jobfile
3634	echo " " >> $jobfile
3635	echo "%END%" >> $jobfile
3636	echo " " >> $jobfile
3637	done
3638
3639	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
3640	echo "cat > Makefile << \"%END%\"" >> $jobfile
3641	cat $source_catalog/Makefile >> $jobfile
3642	echo " " >> $jobfile
3643	echo "%END%" >> $jobfile
3644	echo " " >> $jobfile
3645
3646	echo "cd - > /dev/null" >> $jobfile
3647
3648	fi
3649
3650
3651	# ABSPEICHERN DER KONFIGURATIONSDATEI
3652	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
3653	echo "cat > $config_file << \"%END%\"" >> $jobfile
3654	cat $config_file >> $jobfile
3655	echo "%END%" >> $jobfile
3656	echo " " >> $jobfile
3657
3658
3659	# ABSPEICHERN DER AKTUELLEN MRUN-VERSION
3660	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
3661	echo "cat > $mrun_script_name <<\"%END%\"" >> $jobfile
3662	cat ${PALM_BIN}/$mrun_script_name >> $jobfile
3663	echo "%END%" >> $jobfile
3664	if [[ $host = lctit ]]
3665	then
3666	echo "sed 's/bin\/ksh/home2\/usr5\/mkanda\/pub\/ksh/' < $mrun_script_name > mrun_new" >> $jobfile
3667	echo "mv mrun_new $mrun_script_name" >> $jobfile
3668	fi
3669	echo "chmod u+x $mrun_script_name" >> $jobfile
3670	echo "execute_mrun=true" >> $jobfile
3671	echo " " >> $jobfile
3672
3673	# EVTL. BENOETIGTE INPUT-DATEIEN PER FTP HOLEN ODER DEM JOB DIREKT
3674	# MITGEBEN UND AUF DEM REMOTE-RECHNER IM BENUTZERVERZEICHNIS ABLEGEN
3675	# FALLS DIESES NICHT EXISTIERT, WIRD VERSUCHT, DAS JEWEILS LETZTE
3676	# UNTERVERZEICHNIS DES PFADNAMENS ANZULEGEN
3677	if [[ $do_remote = true ]]
3678	then
3679	(( i = 0 ))
3680	while (( i < iin ))
3681	do
3682	(( i = i + 1 ))
3683	echo "[[ ! -d ${pathin[$i]} ]] && mkdir -p ${pathin[$i]}" >> $jobfile
3684	if [[ "${transin[$i]}" = job ]]
3685	then
3686	echo "cat > ${remotepathin[$i]} <<\"%END%\"" >> $jobfile
3687	eval cat ${pathin[$i]}/${frelin[$i]} >> $jobfile
3688	echo " " >> $jobfile
3689	echo "%END%" >> $jobfile
3690	else
3691	echo "batch_scp -b -o -g -s -u $return_username $return_addres ${remotepathin[$i]} \"${pathin[$i]}\" ${frelin[$i]}" >> $jobfile
3692	fi
3693
3694	# UEBERPRUEFEN, OB DATEI ANGELEGT WERDEN KONNTE
3695	echo "if [[ \$? = 1 ]]" >> $jobfile
3696	echo "then" >> $jobfile
3697	echo " echo \" \" " >> $jobfile
3698	echo " echo \"+++ file ${remotepathin[$i]} could not be created\" " >> $jobfile
3699	echo " echo \" please check, if directory exists on $host!\" " >> $jobfile
3700	echo " echo \"+++ MRUN will not be continued\" " >> $jobfile
3701	echo " execute_mrun=false" >> $jobfile
3702	echo "fi" >> $jobfile
3703	done
3704	fi
3705
3706	# ARBEITSKATALOG AUF DER LOKALEN MASCHINE FUER EVENTUELLE
3707	# FORTSETZUNGSLAUEFE PER ENV-VARIABLE UEBERGEBEN
3708	echo "LOCAL_PWD=$working_directory" >> $jobfile
3709	echo "export LOCAL_PWD" >> $jobfile
3710
3711	# EBENSO LOKALEN MRUN-KATALOG UEBERGEBEN
3712	echo "LOCAL_MRUN_PATH=$PALM_BIN" >> $jobfile
3713	echo "export LOCAL_MRUN_PATH" >> $jobfile
3714
3715	# WORKAROUND FUER RIAM-NEC-JOBS WEGEN PROFILE-SCHWIERIGKEITEN
3716	if [[ $localhost_realname = "gate" \|\| $localhost = lctit ]]
3717	then
3718	echo "export PALM_BIN=$PALM_BIN" >> $jobfile
3719	fi
3720
3721	# MRUN AUF ZIELRECHNER AUFRUFEN
3722	echo "set -x" >> $jobfile
3723	echo "[[ \$execute_mrun = true ]] && ./$mrun_com" >> $jobfile
3724
3725	echo 'ls -al; echo `pwd`' >> $jobfile
3726	echo "cd \$HOME" >> $jobfile
3727	echo "rm -rf $TEMPDIR" >> $jobfile
3728
3729
3730
3731
3732	# JOB PER SUBJOB STARTEN
3733	if [[ $silent = false ]]
3734	then
3735	printf "\n "
3736	else
3737	printf "\n\n"
3738	fi
3739
3740	subjob $job_on_file -h $host -u $remote_username -g $group_number -q $queue -m $memory -N $node_usage -t $cpumax $XOPT $TOPT $OOPT -n $fname -v $jobfile
3741	rm -rf $jobfile
3742
3743
3744	fi # ENDE REMOTE-TEIL
3745
3746
3747
3748	# ENDE DER PROZEDUR

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