Home

Context Navigation

source: palm/trunk/SCRIPTS/mrun @ 343

Last change on this file since 343 was 343, checked in by maronga, 16 years ago
adjustments for lcxt4 and ibmy, allow user 2d xy cross section output at z=nzb+1
Property svn:keywords set to `Id Rev`
File size: 164.2 KB

Line
1	#!/bin/ksh
2	# mrun - Plot-Shellskript
3	# $Id: mrun 343 2009-06-24 12:59:09Z maronga $
4
5	# Prozedur zum Starten von Modellaeufen
6
7	# letzte Aenderung:
8	# 03/03/94 - Siggi - Entwicklungsbeginn
9	# 21/03/94 - Siggi - Entwicklungsabschluss (Version 1.0)
10	# 09/12/94 - Siggi - allexport unterbunden; statt dessen werden jetzt ein-
11	# zelne Variable exportiert. Dies ist noetig, weil an-
12	# sonsten irgendein Speicher ueberlaeuft und von mrun
13	# aufgerufene Programme (z.B. stageout) mit Fehlern
14	# abbrechen (too many arguments)
15	# 20/06/95 - Siggi - noclobber muss explizit abgeschaltet, da jetzt
16	# defaultmaessig im RRZN-Profile eingeschaltet
17	# 10/06/97 - Siggi - Zusaetzliche Option -C bei cpp, damit // nicht
18	# wegfallen
19	# 25/04/00 - Siggi - Version 1.5
20	# remote_addres und remote_user in return_addres bzw.
21	# return_username umbenannt, return_username wird dem
22	# mrun-Aufruf im Job ueber Option -U mitgegeben.
23	# Neue Variable remote_username, die beim interaktiven
24	# mrun-Aufruf zwingend ueber die neue Option -u oder
25	# in der Konfigurationsdatei angegeben werden muss.
26	# 08/02/01 - Siggi - Alle mrun-Meldungen ins englische uebersetzt,
27	# Version 1.7
28	# 05/05/02 - Siggi - Uebersetzungen mittels make-Mechanismus moeglich
29	# 21/11/02 - Siggi - ENV-Variable XLFRTEOPTS wird vor Ausfuehrung auf
30	# IBM gesetzt, um Record-Laenge der NAMELIST-Dateien,
31	# zu bestimmen; Praeprozessoroptionen haben nun alle
32	# die Form -Dtext=text, weil auf IBM sonst text durch
33	# die leere Zeichenkette ersetzt wird
34	# 01/08/03 - Siggi - Test of implementing dvrp+1PE on ibm
35	# 07/01/04 - Siggi - additional preprocessor directive for ibm included
36	# (-D$OMP=OMP) in order to avoid problems with
37	# OMP_NUM_THREADS
38	# 04/01/05 - Siggi - archiving on hanni and berni is done in separate
39	# tar files, one for each node used
40	# 07/01/04 - Siggi - old code for t3e, vpp and hpcs eliminated
41	# 09/01/05 - Siggi - workaround for getting the IP address on gfdl3
42	# 17/01/05 - Siggi - job for data transfer to local machine now within
43	# job class c1 (HLRN)
44	# 27/01/05 - Siggi - IP address workaround for gfdl3 removed
45	# 28/01/05 - Siggi - tar-filenames on $PERM (HLRN) now include the
46	# base filename and cycle number
47	# 16/02/05 - Gerald - hababai validated
48	# 14/03/05 - Siggi - abort on NEC after first runtime error (F_ERRCNT)
49	# 29/03/05 - Marcus - berni*-en0 validated
50	# 21/04/05 - Siggi - transfer-job-protocol for avs-data is no more stored
51	# 24/04/05 - Siggi - netcdf support on lcmuk
52	# 25/04/05 - Siggi - netcdf support on gfld3 (decalpha)
53	# 11/05/05 - Siggi - files with non-numeric extensions (.xxx after cycle
54	# number) can now be used within interactive runs
55	# 12/05/05 - Siggi - netcdf support on ibm
56	# 13/05/05 - Siggi - error in tar-filenames on $PERM (HLRN) removed
57	# 18/05/05 - Siggi - netcdf support on nec
58	# 24/05/05 - Siggi - netcdf support on ibms
59	# 14/06/05 - Siggi - sleep interval after submit of restart job increased
60	# to 30 seconds
61	# 28/06/05 - Siggi - bora adjusted to new intel compiler (LD_LIBRARY_
62	# PATH is temporarily set)
63	# 07/09/05 - Siggi - setting of MP_EAGER_LIMIT switched off because it
64	# caused warnings in the job protocol
65	# 20/10/05 - Siggi - update of netcdf-version on decalpha (gfdl3)
66	# 25/10/05 - Siggi - error in listing files for getting the cycle number
67	# removed
68	# 26/10/05 - Siggi - new paths for dvrp-library, transfer of catalogs
69	# realized by file attribute trpe
70	# 28/10/05 - Siggi - if existing, the file extension is output in case
71	# of missing input file - no job abort in case of
72	# missing input files with file extensions
73	# (preliminary solution)
74	# 31/10/05 - Siggi - data transfer from nech now within seperate job
75	# 04/11/05 - Siggi - netcdf 3.6.0-p1 on ibmh/ibmb
76	# 07/12/05 - Siggi - gallego and elephanta admitted
77	# 30/12/05 - Siggi - gfdl5 (ibmy) admitted
78	# 10/01/06 - Siggi - cpp directive for NetCDF 64bit support
79	# 20/01/06 - Siggi - cpp directive for ibmy
80	# 09/02/06 - Siggi - ibmy admitted for batch mode
81	# 13/04/06 - Siggi - ostria admitted
82	# 18/04/06 - Siggi - usage of OpenMP implemented (additional option -O)
83	# 10/05/06 - Siggi - environment variable XLSMPOPTS set on IBM for
84	# optimization of OpenMP runs (option stacksize is
85	# necessary for large gridpoint numbers because
86	# otherwise a segmentation fault occurs)
87	# 23/05/05 - Siggi - lctit (SUN Fire X4600) admitted
88	# 21/08/06 - Siggi - standard mrun path on scirocco is as on bora
89	# 23/08/06 - Siggi - netcdf support for scirocco (notebook)
90	# 20/09/06 - Marcus - add DVRP library on nech
91	# 24/10/06 - Siggi - Environment variables for PALM steering are written
92	# on local NAMELIST file ENVPAR
93	# 24/11/06 - Siggi - levanto admitted, maestro switched to ifc 9.1
94	# 28/11/06 - Siggi - call to interpret_config.x_levanto because of SuSe 10
95	# 06/02/07 - Siggi - add DVRP library on lcmuk
96	# 07/02/07 - Siggi - revision of source code handling, source code is
97	# now expected in directory given by source_path and
98	# not in the current working directory, source code
99	# files provided in add_source_path are allways
100	# compiled, source code to be compiled is allways
101	# sampled in SOURCES_FOR_RUN_$fname which is a
102	# subdirectory of the current working directory,
103	# -s TEST changed to -s WRITE_PERMIT or -s WP,
104	# adapted for RIAM (neck)
105	# bugfix for cycle number of output file (extout)
106	# all hpmuk-related code removed
107	# 14/02/07 - Siggi - dvrp support for neck added
108	# 28/02/07 - Siggi - empty lines in configuration file are accepted
109	# mrun_path replaced by PALM_BIN,
110	# all machines are calling interpret_config.x
111	# 14/03/07 - Siggi - fimm admitted, revision number added to terminal
112	# output
113	# 16/03/07 - Siggi - adjustments for lctit
114	# 29/03/07 - Siggi - global revision transfered to batch job by new
115	# option -G
116	# 30/03/07 - Siggi - compilation "by hand" removed, cpp-directives/options
117	# + netcdf/dvrp-options are read from configuration
118	# file, host identifier (local_host) is read from
119	# config file, code related to ftp filetransfer
120	# removed (incl. option -f)
121	# 19/06/07 - Siggi - time limit for cdata jobs increased
122	# 25/07/07 - Siggi - two sets of executables can be started on lcmuk,
123	# if new option -Y (coupling) is given,
124	# output of executables to aout_output removed,
125	# messages are immediately written to stdout instead
126	# 03/08/07 - Marcus - add XOPT="-X $numprocs" for lcfimm
127	# 09/08/07 - Marcus - workaround on lcfimm to propagate environment
128	# variables out to the nodes in coupled mode -disabled-
129	# 13/08/07 - Marcus - start local restart jobs per ssh on lcfimm
130	# 28/08/07 - Marcus - completely remove workaround on lcfimm to propagate
131	# environment variables out to the nodes in coupled mode
132	# 15/10/07 - Siggi - Preliminary adjustments for lctit, based on Jin's
133	# suggestions
134	# 19/10/07 - Marcus - further adjustments for lctit: add new optional
135	# argument -g group_number, admit all sla* node_usage
136	# queues
137	# 30/10/07 - Marcus - further adjustments for queues on lctit
138	# 14/02/08 - Bjoern - link of restart files with long file name possible
139	# 28/02/08 - Marcus - If environment variable link_local_output is set to
140	# true, mrun tries "ln -f" on local output and resorts
141	# to "cp" or "cp -r" on error
142	# 15/04/08 - Siggi - argument -c introduced to most of the subjob calls,
143	# which allows the user to choose his own job catalog
144	# by setting job_catalog in the configuration file
145	# (default is ~/job_queue),
146	# workaround for mpiexec with -env option,
147	# adjustments for lcxt4 (Bergen Center for Computational
148	# Science)
149	# 22/05/08 - Marcus - If environment variable link_local_input is set to
150	# true, mrun tries "ln -f" on local input and resorts
151	# to "cp" or "cp -r" on error
152	# 27/05/08 - Siggi - PATH is set to PALM_BIN everywhere (missing so far)
153	# 14/07/08 - Siggi - adjustments for lcsgih
154	# 08/08/08 - Marcus - typo removed in lcxt4 branch
155	# 17/09/08 - Siggi - restart mechanism adjusted for lcsgi
156	# 02/10/08 - BjornM - argument "-Y" modified, adjustments for coupled runs
157	# 21/10/08 - Siggi - bugfix for the case that -K has more than one
158	# argument
159	# 08/11/08 - Siggi - bugfix for depository path settings in configuration
160	# file
161	# 11/11/08 - Siggi - rules for using user code files changed: user
162	# code splitted into one file per subroutine,
163	# user can provide his/her own makefile, only
164	# default source-code filenames are allowed
165	# 14/11/08 - Siggi - cond1 and cond2 are part of the depository name
166	# 08/01/09 - Siggi - mpi module on sgi machines to be used can be set
167	# with environment variable mpilib
168	# 13/01/09 - Siggi - totalview on hice/bice can be used in debug mode
169	# using environment variable totalview
170	# 25/02/09 - Siggi - cputime-option (-t) is allowed to be omitted for
171	# interactive runs
172	# 05/03/09 - Siggi - adjustments for new NEC-SX9 at RIAM (necriam)
173	# 16/03/09 - Siggi - dvrp_lib, dvrp_inc replaced by dvr_lib, dvr_inc,
174	# dvr streaming server is automatically started using
175	# new variable dvr_server and a configuration file
176	# .dvrserver.config,
177	# processing of dvr output files using new script
178	# process_dvr_output implemented, in order to make
179	# dvr application more user friendly
180	# 20/03/09 - Marcus - update of n1ge command for lctit
181	# 16/04/09 - Siggi - new option -y for precursor (uncoupled) ocean runs
182	# to be followed by a coupled atmosphere-ocean run
183	# 21/04/09 - Siggi - adjustments for new IBM at DKRZ, which is now ibmh
184	# 24/06/09 - BjornM - adjustments for coupled/precursor runs on ibmy
185
186
187	# VARIABLENVEREINBARUNGEN + DEFAULTWERTE
188
189	set +o allexport # SICHERHEITSHALBER UNTERBINDEN, DA SONST EVTL. STAGEOUT
190	# NICHT LAUEFT (TOO MANY ARGUMENTS - PROBLEM)
191	set +o noclobber # EXISTIERENDE DATEIEN DUERFEN UEBERSCHRIEBEN WERDEN
192
193	AddFilenames=""
194	additional_conditions=""
195	add_source_path=""
196	afname=""
197	archive_save=true
198	archive_system=none
199	compiler_name=""
200	cond1=""
201	cond2=""
202	config_file=.mrun.config
203	coupled_dist=""
204	coupled_mode="mpi1"
205	cpp_opts=""
206	cpp_options=""
207	cpumax=0
208	cpurest=0
209	delete_temporary_catalog=true
210	do_batch=false
211	do_compile=true
212	do_remote=false
213	do_stagein=true
214	do_stageout=true
215	do_trace=false
216	email_notification=""
217	exclude=""
218	executable=""
219	execution_error=false
220	fimm=false
221	fname=test
222	fromhost=""
223	global_revision=""
224	group_number=none
225	host=""
226	host_file=""
227	hp=""
228	ignore_archive_error=false
229	input_list=""
230	interpreted_config_file=""
231	job_catalog="~/job_queue"
232	job_on_file=""
233	keep_data_from_previous_run=false
234	link_local_input=false
235	link_local_output=false
236	localhost_realname=$(hostname)
237	local_compile=false
238	local_dvrserver_running=.FALSE.
239	locat=normal
240	mainprog=""
241	makefile=""
242	mc=$0
243	while [[ $(echo $mc \| grep -c "/") != 0 ]]
244	do
245	mc=`echo $mc \| cut -f2- -d"/"`
246	done
247	module_files=""
248	mrun_script_name=$mc
249	netcdf_inc=""
250	netcdf_lib=""
251	netcdf_support=false
252	node_usage=default
253	numprocs=""
254	numprocs_atmos=0
255	numprocs_ocean=0
256	OOPT=""
257	openmp=false
258	output_list=""
259	package_list=""
260	punkte="..........................................................."
261	queue=none
262	read_from_config=""
263	restart_run=false
264	return_addres=$(nslookup `hostname` 2>&1 \| grep "Address:" \| tail -1 \| awk '{print $2}')
265	if [[ $return_addres = 130.75.105.158 ]]
266	then
267	return_addres=172.20.25.41
268	echo "+++ WARNING: return_addres changed to $return_addres !!!!!"
269	fi
270	return_password=""
271	return_username=$LOGNAME
272	remotecall=false
273	remote_username=""
274	run_coupled_model=false
275	run_mode=""
276	scirocco=false
277	store_on_archive_system=true
278	striche=" ----------------------------------------------------------------------------"
279	silent=false
280	source_list=""
281	source_path=SOURCE
282	tasks_per_node=""
283	threads_per_task=1
284	tmpcreate=false
285	tmp_data_catalog=""
286	transfer_problems=false
287	usern=$LOGNAME
288	working_directory=`pwd`
289	TOPT=""
290	XOPT=""
291	zeit=$( date \| cut -c 12-19 )
292
293	typeset -i iec=0 iic=0 iin=0 ioc=0 iout=0 memory=0 stagein_anz=0 stageout_anz=0
294	typeset -i cputime i ii iia iii iio icycle inode ival jobges jobsek maxcycle minuten nodes pes sekunden tp1
295
296	typeset -R30 calltime
297	typeset -L20 spalte1
298	typeset -L40 spalte2
299	typeset -L60 spalte3
300	typeset -L35 string1=`date`
301	typeset -L12 string2=$usern
302	typeset -L12 string3=$localhost_realname
303	typeset -L12 string4
304	typeset -L12 string5
305	typeset -L30 version="MRUN 2.0 Rev$Rev: 343 $"
306
307
308
309	# EINZELNE VARIABLE FUER HAUPTPROGRAMM EXPORTIEREN
310	export cpurest fname host localhost return_addres return_username remotecall tasks_per_node
311
312	# FOLGENDE VARIABLEN MUESSEN FUER DIE INTERPRETATION DER KONFIGURATIONSDATEI
313	# EXPORTIERT WERDEN
314	export afname config_file cpp_opts cpumax do_batch do_trace fname fromhost
315	export group_number input_list memory numprocs output_list queue run_mode
316
317
318
319	# FEHLERBEHANDLUNG
320	# BEI EXIT:
321	trap 'rm -rf $working_directory/tmp_mrun
322	if [[ $locat != localhost ]]
323	then
324	# if [[ ! -f ${mrun_path}/statistik/mrun_statistik ]]
325	# then
326	# cat > ${mrun_path}/statistik/mrun_statistik << %STATEND%
327	#MRUN-calls on $localhost
328	#
329	#date and time user localhost remotehost termination mrun-command
330	#--------------------------------------------------------------------------------------------------------------------
331	#%STATEND%
332	# chmod 666 ${mrun_path}/statistik/mrun_statistik
333	# fi
334	#
335	# # EINTRAG IN DIE STATISTIK-DATEI
336	# string4=$host
337	# string5=$locat
338	# if [[ "$job_on_file" = "" && $locat != control_c && $locat != user_abort ]]
339	# then
340	# if [[ $do_batch = true ]]
341	# then
342	# printf "$string1$string2$string3$string4$string5$mrun_com \n" >> ${mrun_path}/statistik/mrun_statistik
343	# else
344	# printf "$string1$string2$string3$string4$string5$mc \n" >> ${mrun_path}/statistik/mrun_statistik
345	# fi
346	# fi
347	echo " " > /dev/null
348	fi
349
350	if [[ $locat != normal && $locat != control_c && $locat != local_compile ]]
351	then
352
353	# EVENTUELLE ERROR-KOMMANDOS ABARBEITEN
354	(( i = 0 ))
355	while (( i < iec ))
356	do
357	(( i = i + 1 ))
358	printf "\n *** Execution of ERROR-command:\n"
359	printf " >>> ${err_command[$i]}\n"
360	eval ${err_command[$i]}
361	done
362	if [[ -n $interpreted_config_file ]] then
363	rm -rf $interpreted_config_file
364	fi
365	if [[ -n .mrun_environment ]] then
366	rm -rf .mrun_environment
367	fi
368	if [[ $tmpcreate = true ]]
369	then
370	printf "\n *** Contents of \"$TEMPDIR\":\n"
371	ls -al; cd
372	[[ $delete_temporary_catalog = true ]] && rm -rf $TEMPDIR
373	fi
374	if [[ "$dvrserver_id" != "" ]]
375	then
376	echo "+++ killing dvrserver_id=$dvrserver_id"
377	kill $dvrserver_id
378	fi
379	if [[ -f ~/job_queue/JOBINFO.$QSUB_REQID ]]
380	then
381	rm -rf ~/job_queue/JOBINFO.$QSUB_REQID
382	fi
383	printf "\n\n+++ MRUN killed \n\n"
384	elif [[ $locat != control_c ]]
385	then
386	printf "\n\n --> all actions finished\n\n"
387	printf " Bye, bye $usern !!\n\n"
388	fi' exit
389
390
391	# BEI TERMINAL-BREAK:
392	trap 'rm -rf $working_directory/tmp_mrun
393	[[ $tmpcreate = true ]] && (cd; rm -rf $TEMPDIR)
394	if [[ -f ~/job_queue/JOBINFO.$QSUB_REQID ]]
395	then
396	rm -rf ~/job_queue/JOBINFO.$QSUB_REQID
397	fi
398	if [[ "$dvrserver_id" != "" ]]
399	then
400	echo "+++ killing dvrserver_id=$dvrserver_id"
401	kill $dvrserver_id
402	fi
403	printf "\n+++ MRUN killed by \"^C\" \n\n"
404	locat=control_c
405	exit
406	' 2
407
408
409	# CHECK IF THE PATH FOR THE PALM BINARIES (SCRIPTS+UTILITY-PROGRAMS) HAS
410	# BEEN SET
411	if [[ "$PALM_BIN" = "" ]]
412	then
413	printf "\n +++ environment variable PALM_BIN has not been set"
414	printf "\n please set it to the directory where the PALM scripts are located"
415	locat=palm_bin; exit
416	fi
417	export PATH=$PALM_BIN:$PATH
418
419
420
421	# SHELLSCRIPT-OPTIONEN EINLESEN UND KOMMANDO NEU ZUSAMMENSETZEN, FALLS ES
422	# FUER FOLGEJOBS BENOETIGT WIRD
423	while getopts :a:AbBc:Cd:D:Fg:G:h:H:i:IkK:m:M:n:o:Op:P:q:r:R:s:St:T:u:U:vxX:yY: option
424	do
425	case $option in
426	(a) afname=$OPTARG;;
427	(A) store_on_archive_system=false; mc="$mc -A";;
428	(b) do_batch=true; mc="$mc -b";;
429	(B) delete_temporary_catalog=false; mc="$mc -B";;
430	(c) config_file=$OPTARG; mc="$mc -c$OPTARG";;
431	(C) restart_run=true; mc="$mc -C";;
432	(d) fname=$OPTARG; mc="$mc -d$OPTARG";;
433	(D) cpp_opts="$cpp_opts $OPTARG"; mc="$mc -D'$OPTARG'";;
434	(F) job_on_file="-D"; mc="$mc -F";;
435	(g) group_number=$OPTARG; mc="$mc -g$OPTARG";;
436	(G) global_revision=$OPTARG; mc="$mc -G'$OPTARG'";;
437	(h) host=$OPTARG; mc="$mc -h$OPTARG";;
438	(H) fromhost=$OPTARG; mc="$mc -H$OPTARG";;
439	(i) input_list=$OPTARG; mc="$mc -i'$OPTARG'";;
440	(I) ignore_archive_error=true; mc="$mc -I";;
441	(k) keep_data_from_previous_run=true; mc="$mc -k";;
442	(K) additional_conditions="$OPTARG"; mc="$mc -K'$OPTARG'";;
443	(m) memory=$OPTARG; mc="$mc -m$OPTARG";;
444	(M) makefile=$OPTARG; mc="$mc -M$OPTARG";;
445	(n) node_usage=$OPTARG; mc="$mc -n$OPTARG";;
446	(o) output_list=$OPTARG; mc="$mc -o'$OPTARG'";;
447	(O) use_openmp=true; mc="$mc -O";;
448	(p) package_list=$OPTARG; mc="$mc -p'$OPTARG'";;
449	(P) return_password=$OPTARG; mc="$mc -P$OPTARG";;
450	(q) queue=$OPTARG; mc="$mc -q$OPTARG";;
451	(r) run_mode=$OPTARG; mc="$mc -r'$OPTARG'";;
452	(R) remotecall=true;return_addres=$OPTARG; mc="$mc -R$OPTARG";;
453	(s) source_list=$OPTARG; mc="$mc -s'$OPTARG'";;
454	(S) read_from_config=false; mc="$mc -S";;
455	(t) cpumax=$OPTARG; mc="$mc -t$OPTARG";;
456	(T) tasks_per_node=$OPTARG; mc="$mc -T$OPTARG";;
457	(u) remote_username=$OPTARG; mc="$mc -u$OPTARG";;
458	(U) return_username=$OPTARG; mc="$mc -U$OPTARG";;
459	(v) silent=true; mc="$mc -v";;
460	(x) do_trace=true;set -x; mc="$mc -x";;
461	(X) numprocs=$OPTARG; mc="$mc -X$OPTARG";;
462	(y) ocean_file_appendix=true; mc="$mc -y";;
463	(Y) run_coupled_model=true; coupled_dist=$OPTARG; mc="$mc -Y'$OPTARG'";;
464	(\?) printf "\n +++ unknown option $OPTARG \n"
465	printf "\n --> type \"$0 ?\" for available options \n"
466	locat=parameter;exit;;
467	esac
468	done
469
470
471	# EVTL. POSITIONSPARAMETER EINLESEN
472	# ZUR ZEIT GIBT ES NUR DEN PARAMETER ? (=KURZINFO)
473	shift OPTIND-1
474
475
476	# KURZE AUFRUFBESCHREIBUNG WIRD HIER AUSGEGEBEN
477	if [[ "$1" = "?" ]]
478	then
479	(printf "\n *** mrun can be called as follows:\n"
480	printf "\n $mrun_script_name -b -c.. -d.. -D.. -f.. -F -h.. -i.. -I -K.. -m.. -o.. -p.. -r.. -R -s.. -t.. -T.. -v -x -X.. -y -Y.. <modus>\n"
481	printf "\n Description of available options:\n"
482	printf "\n Option Description Default-Value"
483	printf "\n -a base name of input files equiv. -d"
484	printf "\n -A no archiving when using file-attribute fl"
485	printf "\n -b batch-job on local machine ---"
486	printf "\n -B do not delete temporary directory at end ---"
487	printf "\n -c configuration file .mrun.config"
488	printf "\n -d base name of files attached to program test"
489	printf "\n -D preprocessor(cpp)-directives \"\" "
490	printf "\n -F create remote job file only ---"
491	printf "\n -h execution host $localhost_realname"
492	printf "\n -i INPUT control list \"\" "
493	printf "\n -I archiving errors of previous batch-jobs"
494	printf "\n will be ignored"
495	printf "\n -k keep data from previous run"
496	printf "\n -K additional conditions for controling"
497	printf "\n usage of conditional code and"
498	printf "\n env-variables in configuration file \"\" "
499	printf "\n -m memory demand in MB (batch-jobs) 0 MB"
500	printf "\n -M Makefile name Makefile"
501	printf "\n -n node usage (shared/not_shared) depending on -h"
502	printf "\n -o OUTPUT control list \"\" "
503	printf "\n -O use OpenMP ---"
504	printf "\n -p software package list \"\" "
505	printf "\n -q queue \"$queue\" "
506	printf "\n -r run control list (combines -i -o) \"\" "
507	printf "\n -s filenames of routines to be compiled \"\" "
508	printf "\n must end with .f, .f90, .F, or .c !"
509	printf "\n use \"..\" for more than one file and wildcards"
510	printf "\n -s TEST compiles all files with w-permit"
511	printf "\n -S config file interpreted by shellscript ---"
512	printf "\n -t allowed cpu-time in seconds (batch) 0"
513	printf "\n -T tasks per node depending on -h"
514	printf "\n -u username on remote machine \"\" "
515	printf "\n -v no prompt for confirmation ---"
516	printf "\n -x tracing of mrun for debug purposes ---"
517	printf "\n -X # of processors (on parallel machines) 1"
518	printf "\n -y add appendix \"_O\" to all local output"
519	printf "\n files (ocean precursor runs followed by"
520	printf "\n coupled atmosphere-ocean runs) ---"
521	printf "\n -Y run coupled model, \"#1 #2\" with"
522	printf "\n #1 atmosphere and #2 ocean processors \"#/2 #/2\" depending on -X"
523	printf "\n "
524	printf "\n Possible values of positional parameter <modus>:"
525	printf "\n \"?\" - this outline \n\n") \| more
526	exit
527	elif [[ "$1" != "" ]]
528	then
529	printf "\n +++ positional parameter $1 unknown \n"
530	locat=parameter; exit
531	fi
532
533
534
535	# KURZE STARTMELDUNG
536	printf "\n*** $version "
537	printf "\n will be executed. Please wait ..."
538
539
540
541	# PRUEFEN, OB KONFIGURATIONS-DATEI VORHANDEN
542	if [[ ! -f $config_file ]]
543	then
544	printf "\n\n +++ configuration file: "
545	printf "\n $config_file"
546	printf "\n does not exist"
547	locat=connect; exit
548	fi
549
550
551	# HOST-IDENTIFIER (local_host) AUS KONFIGURATIONSDATEI BESTIMMEN
552	line=""
553	grep "%host_identifier" $config_file > tmp_mrun
554	while read line
555	do
556	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
557	then
558	HOSTNAME=`echo $line \| cut -d" " -s -f2`
559	host_identifier=`echo $line \| cut -d" " -s -f3`
560	if [[ $localhost_realname = $HOSTNAME ]]
561	then
562	localhost=$host_identifier
563	break
564	fi
565	fi
566	done < tmp_mrun
567
568	if [[ "$localhost" = "" ]]
569	then
570	printf "\n\n +++ no host identifier found in configuration file \"$config_file\""
571	printf "\n for local host \"$localhost_realname\"."
572	printf "\n Please add line"
573	printf "\n \"\%host_identifier $localhost_realname <identifier>\""
574	printf "\n to the configuration file."
575	locat=localhost; exit
576	fi
577
578
579	# HOSTSPEZIFISCHE VARIABLEN SETZEN
580	case $localhost_realname in
581	(breg-en0\|berni-en0) archive_system=tivoli;;
582	(cs*) archive_system=ut;;
583	(fimm.bccs.uib.no) fimm=true;;
584	(gate\|n-sx) PATH=$PALM_BIN:$PATH:/usr/bin/nqsII;;
585	(hreg-en0\|hanni-en0) archive_system=tivoli;;
586	(scirocco) scirocco=true;;
587	esac
588
589
590
591	# BASISNAME DER INPUT-DATEIEN GLEICH ALLGEMEINEM BASISNAMEN SETZEN,
592	# WENN NICHT VOM BENUTZER ANDERS BESTIMMT
593	[[ "$afname" = "" ]] && afname=$fname
594
595
596	# EVTL. RUN-MODUS DEN I/O-LISTEN HINZUFUEGEN
597	if [[ "$run_mode" != "" ]]
598	then
599	input_list="$input_list $run_mode"
600	output_list="$output_list $run_mode"
601	fi
602
603
604	# RECHNERNAMEN ABSPEICHERN, VON DEM AUS JOB GESTARTET WIRD,
605	# ALLERDINGS NUR DANN, WENN NICHT PER OPTION -H BEREITS EIN WERT
606	# ZUGEWIESEN WURDE (MRUN MACHT DIES IMMER, WENN ES SELBST BATCH-JOBS
607	# STARTET)
608	if [[ "$fromhost" = "" ]]
609	then
610	fromhost=$localhost
611	fi
612
613
614	# PRUEFEN, OB MRUN NUR TESTWEISE AUF DER LOKALEN MASCHINE KOMPILIEREN SOLL
615	if [[ "$source_list" = LOCAL_COMPILE_TEST ]]
616	then
617	source_list=TEST
618	local_compile=true
619	host=$localhost
620	fi
621
622
623	# PRUEFEN, OB AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL
624	# WERT VON do_remote WIRD FUER DATEIVERBINDUNGEN BENOETIGT.
625	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
626	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
627	if [[ -n $host && "$host" != $localhost ]]
628	then
629	do_batch=true
630	do_remote=true
631	case $host in
632	(ibm\|ibmb\|ibmh\|ibms\|ibmy\|nech\|necriam\|lcsgib\|lcsgih\|lctit\|unics\|lcxt4) true;;
633	(*) printf "\n"
634	printf "\n +++ sorry: execution of batch jobs on remote host \"$host\""
635	printf "\n is not available"
636	locat=nqs; (( iec = 0 )); exit;;
637	esac
638	else
639	host=$localhost
640	fi
641
642
643	# ZUSATZBEDINGUNGEN (OPTION -K) AUSWERTEN
644	if [[ -n $additional_conditions ]]
645	then
646	# echo $additional_conditions \| cut -d" " -f1-3 \| read cond1 cond2 dummy
647	cond1=`echo $additional_conditions \| cut -d" " -f1`
648	cond2=`echo $additional_conditions \| cut -d" " -s -f2`
649	dummy=`echo $additional_conditions \| cut -d" " -s -f3`
650	if [[ -n $dummy ]]
651	then
652	printf "\n +++ more than 2 additional conditions given for Option \"-K\""
653	locat=options; exit
654	fi
655	fi
656
657
658	# KOPPLUNGSEIGENSCHAFTEN (-Y) AUSWERTEN UND coupled_mode BESTIMMEN
659	if [[ $run_coupled_model = true ]]
660	then
661
662	if [[ -n $coupled_dist ]]
663	then
664
665	numprocs_atmos=`echo $coupled_dist \| cut -d" " -s -f1`
666	numprocs_ocean=`echo $coupled_dist \| cut -d" " -s -f2`
667
668	if (( $numprocs_ocean + $numprocs_atmos != $numprocs ))
669	then
670
671	printf "\n +++ number of processors does not fit to specification by \"-Y\"."
672	printf "\n PEs (total) : $numprocs"
673	printf "\n PEs (atmosphere): $numprocs_atmos"
674	printf "\n PEs (ocean) : $numprocs_ocean"
675	locat=coupling; exit
676
677	# REARRANGING BECAUSE CURRENTLY ONLY 1:1 TOPOLOGIES ARE SUPPORTED
678	# THIS SHOULD BE REMOVED IN FUTURE
679	elif (( $numprocs_ocean != $numprocs_atmos ))
680	then
681
682	printf "\n +++ currently only 1:1 topologies are supported"
683	printf "\n PEs (total) : $numprocs"
684	printf "\n PEs (atmosphere): $numprocs_atmos"
685	printf "\n PEs (ocean) : $numprocs_ocean"
686	(( numprocs_atmos = $numprocs / 2 ))
687	(( numprocs_ocean = $numprocs / 2 ))
688	printf "\n +++ rearranged topology to $numprocs_atmos:$numprocs_ocean"
689
690	fi
691
692	else
693
694	(( numprocs_ocean = $numprocs / 2 ))
695	(( numprocs_atmos = $numprocs / 2 ))
696
697	fi
698	coupled_dist=`echo "$numprocs_atmos $numprocs_ocean"`
699
700	# GET coupled_mode FROM THE CONFIG FILE
701	line=""
702	grep "%cpp_options.-D__mpi2.$host" $config_file > tmp_mrun
703	while read line
704	do
705	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" && ( $(echo $line \| cut -d" " -s -f4) = $cond1 \|\| $(echo $line \| cut -d" " -s -f4) = $cond2 ) ]]
706	then
707	coupled_mode="mpi2"
708	fi
709	done < tmp_mrun
710
711	fi
712
713
714	# PRUEFEN, OB EVTL. BEI VORHERGEHENDEM LAUF (KETTENJOB) EINE
715	# ARCHIVIERUNG FEHLGESCHLAGEN IST
716	if [[ -f ~/job_queue/ARCHIVE_ERROR_$fname ]]
717	then
718	if [[ $ignore_archive_error = false ]]
719	then
720	printf "\n +++ data archiving of previous run failed"
721	printf "\n see directory \~/job_queue on remote machine"
722	locat=archive; exit
723	else
724	printf "\n +++ warning: data archiving in a previous run failed"
725	printf "\n MRUN continues, trying to get backup copy"
726	fi
727	fi
728
729
730
731	# LESEN UND INTERPRETIEREN DER KONFIGURATIONS-DATEI VOM SHELLSCRIPT AUS
732	# VORUEBERGEHEND ZWINGEND AUF LINUX-RECHNERN
733	if [[ "$read_from_config" = false ]]
734	then
735
736	[[ $silent = false ]] && printf "\n Reading the configuration file... "
737	while read zeile
738	do
739	[[ $silent = false ]] && printf "."
740
741
742	# ZUERST EVENTUELL VORKOMMENDE ENVIRONMENT-VARIABLEN DURCH IHRE WERTE
743	# ERSETZEN
744	eval zeile=\"$zeile\"
745
746
747	# INTERPRETATION DER ZEILE
748	if [[ "$(echo $zeile)" = "" ]]
749	then
750	# LEERZEILE, KEINE AKTION
751	continue
752
753	elif [[ "$(echo $zeile \| cut -c1)" = "#" ]]
754	then
755
756	# ZEILE IST KOMMENTARZEILE
757	true
758
759	elif [[ "$(echo $zeile \| cut -c1)" = "%" ]]
760	then
761
762	# ZEILE DEFINIERT ENVIRONMENT-VARIABLE
763	zeile=$(echo $zeile \| cut -c2-)
764	# echo $zeile \| cut -d" " -f1-5 \| read var value for_host for_cond1 for_cond2
765	var=`echo $zeile \| cut -d" " -f1`
766	value=`echo $zeile \| cut -d" " -s -f2`
767	for_host=`echo $zeile \| cut -d" " -s -f3`
768	for_cond1=`echo $zeile \| cut -d" " -s -f4`
769	for_cond2=`echo $zeile \| cut -d" " -s -f5`
770
771	if [[ "$for_host" = "" \|\| ( "$for_host" = $host && "$for_cond1" = "$cond1" && "$for_cond2" = "$cond2" ) \|\| $(echo "$input_list$output_list"\|grep -c "$for_host") != 0 ]]
772	then
773
774	# BEI COMPILER- CPP- ODER LINKEROPTIONEN EVTL ":" DURCH " "
775	# ERSETZEN. "::" WIRD DURCH ":" ERSETZT.
776	value=`echo $value \| sed 's/::/%DUM%/g' \| sed 's/:/ /g' \| sed 's/%DUM%/:/g'`
777
778
779	# ENVIRONMENT-VARIABLE WIRD WERT AUS KONFIGURATIONSDATEI
780	# ZUGEWIESEN, WENN SIE SELBST NOCH KEINEN WERT UEBER DIE
781	# ENTSPRECHENDE SCRIPT-OPTION ERHALTEN HAT. SOLCHE
782	# VARIABLEN HAETTEN DANN DEN WERT "" ODER IM INTEGER-FALL DEN
783	# WERT 0. ALLGEMEINE REGEL ALSO: SCRIPT-OPTION GEHT UEBER
784	# KONFIGURATIONSDATEI
785	if [[ "$(eval echo \$$var)" = "" \|\| "$(eval echo \$$var)" = "0" ]]
786	then
787	eval $var=\$value
788
789	# EVTL. BILDSCHIRMAUSGABEN DER ENVIRONMENT-VARIABLEN
790	if [[ $do_trace = true ]]
791	then
792	printf "\n*** ENVIRONMENT-VARIABLE $var = $value"
793	fi
794	fi
795
796	# WENN ENVIRONMENT-VARIABLE HOST VEREINBART, DANN SOFORT AUSWERTEN
797	# WERT VON do-remote WIRD BEI DATEIVERBINDUNGEN BENOETIGT
798	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
799	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
800	if [[ $var = host ]]
801	then
802	if [[ -n $host && "$host" != $localhost ]]
803	then
804	do_batch=true
805	do_remote=true
806	case $host in
807	(ibm\|ibms\|ibmy\|lcsgib\|lcsgih\|lctit\|nech\|necriam\|unics\|lcxt4) true;;
808	(*) printf "\n +++ sorry: execution of batch jobs on remote host \"$host\""
809	printf "\n is not available"
810	locat=nqs; exit;;
811	esac
812	else
813	host=$localhost
814	fi
815	fi
816
817	# VOM BENUTZER DEFINIERTE ENVIRONMENT VARIABLEN MUESSEN PRINZIPIELL
818	# EXPORTIERT WERDEN, DA SIE VIELLEICHT IN WEITER UNTEN AUFZURUFEN-
819	# DEN PROGRAMMEN BENOETIGT WERDEN
820	export $var
821	fi
822
823
824
825
826	elif [[ "$(echo $zeile \| cut -c1-3)" = "EC:" ]]
827	then
828
829	# ZEILE DEFINIERT ERROR-KOMMANDO
830	(( iec = iec + 1 ))
831	zeile=$(echo $zeile \| cut -c4-)
832	err_command[$iec]="$zeile"
833
834	elif [[ "$(echo $zeile \| cut -c1-3)" = "IC:" ]]
835	then
836
837	# ZEILE DEFINIERT INPUT-KOMMANDO
838	(( iic = iic + 1 ))
839	zeile=$(echo $zeile \| cut -c4-)
840	in_command[$iic]="$zeile"
841
842	elif [[ "$(echo $zeile \| cut -c1-3)" = "OC:" ]]
843	then
844
845	# ZEILE DEFINIERT OUTPUT-KOMMANDO
846	(( ioc = ioc + 1 ))
847	zeile=$(echo $zeile \| cut -c4-)
848	out_command[$ioc]="$zeile"
849
850	else
851
852	# ZEILE DEFINIERT DATEIVERBINDUNG. EINLESEN DER DATEIEIGENSCHAFTEN
853	# s2a: in/out - Feld
854	# s2b: loc - Feld (optional)
855	# s2c: tr/ar - Feld (optional)
856	# echo $zeile \| cut -d" " -f1-2 \| read s1 s2
857	s1=`echo $zeile \| cut -d" " -f1`
858	s2=`echo $zeile \| cut -d" " -s -f2`
859	s2a=$(echo $s2 \| cut -d":" -f1)
860	if [[ $(echo $s2 \| grep -c ":") = 0 ]]
861	then
862	s2b=""
863	s2c=""
864	else
865	# echo $s2 \| cut -d":" -f2-3 \| sed 's/:/ /g' \| read s2b s2c
866	s2b=`echo $s2 \| cut -d":" -f2 \| sed 's/:/ /g'`
867	s2c=`echo $s2 \| cut -d":" -s -f3 \| sed 's/:/ /g'`
868	fi
869	# echo $zeile \| cut -d" " -f3-6 \| read s3 s4 s5 s6
870	s3=`echo $zeile \| cut -d" " -f3`
871	s4=`echo $zeile \| cut -d" " -s -f4`
872	s5=`echo $zeile \| cut -d" " -s -f5`
873	s6=`echo $zeile \| cut -d" " -s -f6`
874
875
876	# ABSPEICHERN DER DATEIVERBINDUNG, FALLS IN INPUT- ODER OUTPUT-LIST
877	# VERMERKT. VARIABLE S3 KANN AUCH LISTE ENTHALTEN (FELDTRENNER ":")
878	# DATEIVERBINDUNG WIRD DANN NICHT ABGESPEICHERT UND GEPRUEFT, WENN
879	# PROGRAMMLAUF AUF REMOTE-MASCHINE ERFOLGT UND DATEI NUR LOKAL VOR-
880	# HANDEN SEIN MUSS (D.H. s2b = loc)
881	IFSALT="$IFS"; IFS="$IFS:"
882	if [[ "$s2a" = in && ! ( $do_remote = true && ( "$s2b" = loc \|\| "$s2b" = locopt ) ) ]]
883	then
884	found=false
885	for actual in $input_list
886	do
887	for formal in $s3
888	do
889	[[ $actual = $formal \|\| "$formal" = "-" ]] && found=true
890	done
891	done
892	if [[ $found = true ]]
893	then
894	(( iin = iin + 1 ))
895	localin[$iin]=$s1; transin[$iin]=$s2b; actionin[$iin]=$s2c;
896	typein[$iin]=$s3; pathin[$iin]=$s4; endin[$iin]=$s5;
897	extin[$iin]=$s6
898	fi
899	elif [[ "$s2a" = out && ! ( $do_remote = true && "$s2b" = loc ) ]]
900	then
901	found=false
902	for actual in $output_list
903	do
904	for formal in $s3
905	do
906	[[ $actual = $formal \|\| "$formal" = "-" ]] && found=true
907	done
908	done
909	if [[ $found = true ]]
910	then
911	(( iout = iout + 1 ))
912	localout[$iout]=$s1; actionout[$iout]=$s2c; typeout[$iout]=$s3;
913	pathout[$iout]=$s4; endout[$iout]=$s5; extout[$iout]=$s6
914	fi
915	elif [[ "$s2a" != in && "$s2a" != out ]]
916	then
917	printf "\n +++ I/O-attribute in configuration file $config_file has the invalid"
918	printf "\n value \"$s2\". Only \"in\" and \"out\" are allowed!"
919	locat=connect; exit
920	fi
921	IFS="$IFSALT"
922	fi
923	done < $config_file
924
925	else
926
927
928	# INTERPRETATION DER KONFIGURATIONSDATEI MITTELS FORTRAN 90 - PROGRAMM
929	[[ $silent = false ]] && printf "..."
930	export cond1 cond2 config_file do_remote do_trace input_list localhost output_list
931	export interpreted_config_file=.icf.$RANDOM
932
933
934
935	# ENVIRONMENT-VARIABLEN FUER INTERPRET_CONFIG UEBER NAMELIST_DATEI ZUR
936	# VERFUEGUNG STELLEN
937	cat > .mrun_environment << %%END%%
938	&mrun_environment cond1 = '$cond1', cond2 = '$cond2',
939	config_file = '$config_file', do_remote = '$do_remote',
940	do_trace = '$do_trace', host = '$host',
941	input_list = '$input_list', icf = '$interpreted_config_file',
942	localhost = '$localhost', output_list = '$output_list' /
943
944	%%END%%
945
946	# WERTE VON MRUN-OPTIONEN SICHERN UND DAMIT GEGEBENENFALLS SPAETER DIE
947	# IN DER KONFIGURAIONSDATEI ANGEGEBENEN WERTE UEBERSTEUERN
948	mrun_memory=$memory
949	mrun_group_number=$group_number
950	mrun_cpumax=$cpumax
951	mrun_numprocs=$numprocs
952
953	if [[ $localhost_realname = "sx-fep" ]]
954	then
955	/home/COAR/NC/raasch/pub/interpret_config_necriam.x
956	else
957	interpret_config.x
958	fi
959	rm .mrun_environment
960
961
962	# AUSFUEHRUNG DER GENERIERTEN SHELL-KOMMANDOS IN DIESER SHELL
963	chmod u+x $interpreted_config_file
964	export PATH=$PATH:.
965	. $interpreted_config_file
966	rm $interpreted_config_file
967
968
969	# OPTIONSWERTE UEBERSTEUERN KONFIGURATIONSDATEI
970	[[ $mrun_memory != 0 ]] && memory=$mrun_memory
971	[[ "$mrun_group_number" != "none" ]] && group_number=$mrun_group_number
972	[[ $mrun_cpumax != 0 ]] && cpumax=$mrun_cpumax
973	[[ "$mrun_numprocs" != "" ]] && numprocs=$mrun_numprocs
974
975	fi
976
977
978	# QUELLTEXTVERZEICHNIS AUF LOKALER MASCHINE AUS KONFIGURATIONSDATEI
979	# BESTIMMEN (WUERDE SONST EVTL. DAS VERZEICHNIS DES JEWEILS UNTER -h
980	# ANGEGEBENEN REMOTE-RECHNERS SEIN)
981	# BEI BATCH-JOBS SIND DIE ZU UEBERSETZENDEN PROGRAMMTEILE SCHON KOMPLETT
982	if [[ "$SOURCES_COMPLETE" = "" ]]
983	then
984
985	# ZUERST PRUEFEN, OB EIN GLOBALER QUELLTEXTPFAD FUER ALLE RECHNER
986	# VEREINBART WURDE
987	source_path=""
988	line=""
989	grep "%source_path" $config_file > tmp_mrun
990	while read line
991	do
992	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
993	then
994	if [[ "$(echo $line \| cut -d" " -f3)" = "" ]]
995	then
996	global_source_path=`echo $line \| cut -d" " -f2`
997	fi
998	fi
999	done < tmp_mrun
1000
1001	line=""
1002	found=false
1003	grep " $localhost" $config_file \| grep "%source_path" > tmp_mrun
1004	while read line
1005	do
1006	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
1007	then
1008	if [[ $found = true ]]
1009	then
1010	printf "\n\n +++ more than one source path found in configuration file"
1011	printf "\n for local host \"$localhost\" "
1012	locat=source_path; exit
1013	fi
1014	source_path=`echo $line \| cut -d" " -f2`
1015	found=true
1016	fi
1017	done < tmp_mrun
1018	rm tmp_mrun
1019
1020	if [[ "$source_path" = "" ]]
1021	then
1022	if [[ "$global_source_path" != "" ]]
1023	then
1024	source_path=$global_source_path
1025	else
1026	printf "\n\n +++ no source path found in configuration file"
1027	printf "\n for local host \"$localhost\" "
1028	locat=source_path; exit
1029	fi
1030	fi
1031	eval source_path=$source_path
1032
1033	if [[ ! -d $source_path ]]
1034	then
1035	printf "\n\n +++ source path \"$source_path\" on local host"
1036	printf "\n \"$localhost\" does not exist"
1037	locat=source_path; exit
1038	fi
1039
1040	fi
1041
1042
1043	# GLOBALE REVISIONSNUMMER ERMITTELN (FORTSETZUNGSLAEUFEN WIRD DIESE
1044	# DURCH OPTION -G MITGETEILT)
1045	if [[ "$global_revision" = "" ]]
1046	then
1047	global_revision=`svnversion $source_path 2>/dev/null`
1048	global_revision="Rev: $global_revision"
1049	fi
1050
1051
1052	# NOCHMAL PRUEFEN, OB AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL
1053	# (HOST KANN IN KONFIGURATIONSDATEI ANDERS FESTGELEGT WORDEN SEIN)
1054	# WERT VON do_remote WIRD FUER DATEIVERBINDUNGEN BENOETIGT.
1055	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
1056	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
1057	if [[ -n $host && "$host" != $localhost ]]
1058	then
1059	do_batch=true
1060	do_remote=true
1061	case $host in
1062	(ibm\|ibmb\|ibmh\|ibms\|ibmy\|lcsgib\|lcsgih\|lctit\|nech\|necriam\|unics\|lcxt4) true;;
1063	(*) printf "\n"
1064	printf "\n +++ sorry: execution of batch jobs on remote host \"$host\""
1065	printf "\n is not available"
1066	locat=nqs; (( iec = 0 )); exit;;
1067	esac
1068	else
1069	host=$localhost
1070	fi
1071
1072
1073	# PRUEFUNG EINIGER PROZESSORZAHLANGABEN BEI RECHNUNGEN AUF PARALLELRECHNERN
1074	if [[ "$cond1" = parallel \|\| "$cond2" = parallel ]]
1075	then
1076
1077	# PRUEFEN, OB DIE ANZAHL DER ZU VERWENDENDEN PES ANGEGEBEN WURDE
1078	if [[ ! -n $numprocs ]]
1079	then
1080	printf "\n"
1081	printf "\n +++ option \"-K parallel\" requires additional specification"
1082	printf "\n of the number of processors to be used by"
1083	printf "\n mrun-option \"-X\" or by environment-variable"
1084	printf "\n \"numprocs\" in the configuration file"
1085	locat=numprocs; (( iec = 0 )); exit
1086	fi
1087
1088	# PRUEFEN, OB DIE PROZESSORANZAHL PRO KNOTEN ANGEGEBEN WURDE (GGF.
1089	# DEFAULT-WERT SETZEN) UND OB SIE EIN GANZZAHLIGER TEILER DER
1090	# GESAMTPROZESSORANZAHL IST
1091	if [[ $host = nech \|\| $host = necriam \|\| $host = ibmh \|\| $host = ibmb \|\| $host = ibms ]]
1092	then
1093	[[ "$tasks_per_node" = "" ]] && tasks_per_node=6
1094	(( ival = $tasks_per_node ))
1095	(( pes = numprocs ))
1096	# if [[ $(echo $package_list \| grep -c dvrp_graphics+1PE) = 1 ]]
1097	# then
1098	# (( pes = pes - 1 ))
1099	# fi
1100	(( ii = pes / ival ))
1101	if (( pes - ii * ival > 0 ))
1102	then
1103	printf "\n"
1104	printf "\n +++ tasks per node (option \"-T\") must be an integral"
1105	printf "\n divisor of the total number of processors (option \"-X\")"
1106	printf "\n values of this mrun-call: \"-T $tasks_per_node\" \"-X $numprocs\""
1107	locat=tasks_per_node; (( iec = 0 )); exit
1108	fi
1109	fi
1110
1111	# IBMY HAT NUR EINEN KNOTEN
1112	if [[ $host = ibmy ]]
1113	then
1114	if [[ "$tasks_per_node" != "" && "$tasks_per_node" != "$numprocs" ]]
1115	then
1116	printf "\n"
1117	printf "\n +++ on ibmy, tasks per node (option \"-T\") must be equal to the"
1118	printf "\n total number of processors (option \"-X\")"
1119	printf "\n values of this mrun-call: \"-T $tasks_per_node\" \"-X $numprocs\""
1120	locat=tasks_per_node; (( iec = 0 )); exit
1121	fi
1122	fi
1123
1124	# FALLS OPENMP PARALLELISIERUNG VERWENDET WERDEN SOLL, ANZAHL VON THREADS
1125	# SETZEN UND ZAHL DER TASKS PRO KNOTEN AUF 1 SETZEN
1126	if [[ $use_openmp = true ]]
1127	then
1128	threads_per_task=$tasks_per_node
1129	tasks_per_node=1
1130	fi
1131	OOPT="-O $threads_per_task"
1132	TOPT="-T $tasks_per_node"
1133
1134	# GESAMTZAHL DER KNOTEN BESTIMMEN
1135	if [[ "$tasks_per_node" != "" ]]
1136	then
1137	(( nodes = numprocs / ( tasks_per_node * threads_per_task ) ))
1138	fi
1139
1140	# PRUEFEN, OB NODE USAGE EINEN ERLAUBTEN WERT HAT BZW. DEN DEFAULT
1141	# SETZEN
1142	if [[ $node_usage = default ]]
1143	then
1144	if [[ $host = ibms ]]
1145	then
1146	node_usage=shared
1147	elif [[ $host = lctit ]]
1148	then
1149	node_usage=RAM64GB
1150	elif [[ $(echo $host \| cut -c1-5) = lcsgi ]]
1151	then
1152	node_usage=singlejob
1153	else
1154	node_usage=not_shared
1155	fi
1156	fi
1157
1158	if [[ $node_usage != shared && $node_usage != not_shared && $node_usage != singlejob && "$(echo $node_usage \| cut -c1-3)" != "sla" && $node_usage != RAM64GB ]]
1159	then
1160	printf "\n"
1161	printf "\n +++ node usage (option \"-n\") is only allowed to be set"
1162	printf "\n \"shared\" or \"not_shared\""
1163	locat=tasks_per_node; (( iec = 0 )); exit
1164	fi
1165
1166	fi
1167
1168	# PRUEFEN, OB HOSTFILE EXISTIERT
1169	if [[ -n $hostfile ]]
1170	then
1171	if [[ ! -f $hostfile ]]
1172	then
1173	printf "\n"
1174	printf "\n +++ hostfile \"$hostfile\" does not exist"
1175	locat=hostfile; exit
1176	fi
1177	fi
1178
1179	# PRUEFEN, OB RHOSTS DATEI EXISTIERT. GEGEBENENFALLS ANLEGEN BZW. ERWEITERN
1180	if [[ $host = ibmy && $do_remote = false ]]
1181	then
1182	if [[ ! -f $HOME/.rhosts ]]
1183	then
1184	echo "gfdl5.yonsei.ac.kr" > $HOME/.rhosts
1185	printf "\n\n *** file:"
1186	printf "\n $HOME/.rhosts"
1187	printf "\n was created\n"
1188	fi
1189	if [[ $(grep -c gfdl5.yonsei.ac.kr $HOME/.rhosts) = 0 ]]
1190	then
1191	echo "gfdl5.yonsei.ac.kr" >> $HOME/.rhosts
1192	printf "\n\n *** file:"
1193	printf "\n $HOME/.rhosts"
1194	printf "\n was extended by the name of the current host\n"
1195	fi
1196	fi
1197
1198
1199
1200	# FALLS NICHT VORGEGEBEN, DEFAULT-QUEUE AUF DER ZIELMASCHINE FESTLEGEN
1201	if [[ $queue = none ]]
1202	then
1203	case $host in
1204	(ibmb) if [[ $node_usage = shared ]]
1205	then
1206	queue=cshare
1207	else
1208	queue=csolo
1209	fi;;
1210	(ibmh) queue=no_class;;
1211	(ibmy) queue=parallel;;
1212	(lcsgib) queue=bigq;;
1213	(lcsgih) queue=bigq;;
1214	(lctit) queue=RAM64GB;;
1215	(nech) queue=none;;
1216	(necriam) queue=SP;;
1217	(unics) queue=unics;;
1218	esac
1219	fi
1220
1221
1222	# VOLLSTAENDIGE DATEINAMEN DER INPUT-FILES BILDEN,
1223	# INPUT-DATEIEN AUF VORHANDENSEIN PRUEFEN UND EVTL. HOECHSTE ZYKLUSNUMMER
1224	# ERMITTELN
1225	(( i = 0 ))
1226	while (( i < iin ))
1227	do
1228	(( i = i + 1 ))
1229	(( maxcycle = 0 ))
1230
1231	# NAMENSBILDUNG (EVTL. IST FESTER DATEINAME VORGEGEBEN)
1232	if [[ "${actionin[$i]}" = di ]]
1233	then
1234	remotepathin[$i]=${pathin[$i]}/${endin[$i]} # REMOTE-PFAD ERST AUF
1235	# REM-MASCHINE AUSWERTEN
1236	eval filename=${pathin[$i]}/${endin[$i]}
1237	else
1238	remotepathin[$i]=${pathin[$i]}/${afname}${endin[$i]} # REMOTE-PFAD ERST AUF
1239	# REM-MASCHINE AUSWERTEN
1240	eval filename=${pathin[$i]}/${afname}${endin[$i]}
1241	fi
1242
1243	# PRUEFEN AUF VORHANDENSEIN
1244	if [[ $(ls $filename* 2>&1 \| grep -c "not found") = 1 \|\| \
1245	$(ls $filename* 2>&1 \| grep -c "No such file") = 1 \|\| \
1246	$(ls $filename* 2>&1 \| grep -c "does not exist") = 1 ]]
1247	then
1248	# DATEIEN MIT EXTENSION (Z.B. NC) MUESSEN NICHT ZWINGEND VORHANDEN
1249	# SEIN, DESHALB IN SOLCHEN FAELLEN KEIN ABBRUCH. DIES IST NUR EINE
1250	# VORUEBERGEHENDE LOESUNG (OKT 05). NICHT ZWINGEND BENOETIGTE
1251	# EINGABEDATEIEN SOLLTEN EINE SPEZIELLE OPTION IN DER DATEI-
1252	# VERBINDUNGSANWEISUNG BEKOMMEN (Z.B. inopt?)
1253	if [[ "${transin[$i]}" != "locopt" ]]
1254	then
1255	printf "\n\n +++ INPUT-file: "
1256	if [[ "${extin[$i]}" = "" ]]
1257	then
1258	printf "\n $filename"
1259	else
1260	printf "\n $filename.${extin[$i]}"
1261	fi
1262	printf "\n does not exist\n"
1263	locat=input; exit
1264	else
1265	transin[$i]="unavailable"
1266	fi
1267	else
1268
1269	# ZYKLUSNUMMER FESTSTELLEN
1270	ls -1 -d $filename > filelist 2>/dev/null
1271	ls -1 -d $filename.* >> filelist 2>/dev/null
1272	while read zeile
1273	do
1274	cycle=$(print $zeile \| cut -f2 -d".")
1275	if [[ "$cycle" = "$zeile" ]]
1276	then
1277	(( icycle = 0 ))
1278	elif [[ "$cycle" = "${extin[$i]}" ]]
1279	then
1280	(( icycle = 0 ))
1281	else
1282	(( icycle = $cycle ))
1283	fi
1284	if (( icycle > maxcycle ))
1285	then
1286	(( maxcycle = icycle ))
1287	file_to_be_used=$zeile
1288	fi
1289	done <filelist
1290	rm filelist
1291
1292	# EVTL. ZYKLUSNUMMER AN DATEINAMEN ANFUEGEN
1293	if (( maxcycle > 0 ))
1294	then
1295	if [[ "${extin[$i]}" != " " && "${extin[$i]}" != "" ]]
1296	then
1297	filename=${filename}.$maxcycle.${extin[$i]}
1298	else
1299	filename=${filename}.$maxcycle
1300	fi
1301	else
1302	if [[ "${extin[$i]}" != " " && "${extin[$i]}" != "" ]]
1303	then
1304	filename=${filename}.${extin[$i]}
1305	fi
1306	fi
1307
1308	# DATEINAMEN OHNE PFAD ABER MIT ZYKLUSNUMMER ABSPEICHERN,
1309	# DA SPAETER BEI RUECKSPEICHERN VOM ARCHIVSYSTEM EVTL. BENOETIGT
1310	absnamein[$i]=$filename
1311	if (( maxcycle > 0 ))
1312	then
1313	if [[ "${actionin[$i]}" = di ]]
1314	then
1315	frelin[$i]=${endin[$i]}.$maxcycle
1316	else
1317	frelin[$i]=${afname}${endin[$i]}.$maxcycle
1318	fi
1319	else
1320	if [[ "${actionin[$i]}" = di ]]
1321	then
1322	frelin[$i]=${endin[$i]}
1323	else
1324	frelin[$i]=${afname}${endin[$i]}
1325	fi
1326	fi
1327
1328	fi
1329	done
1330
1331
1332	# VOLLSTAENDIGE DATEINAMEN (OHNE $ ODER ~) DER OUTPUT-FILES BILDEN,
1333	# OUTPUT-DATEIEN AUF VORHANDENSEIN PRUEFEN UND EVTL. HOECHSTE ZYKLUSNUMMER
1334	# ERMITTELN ODER, FALLS NICHT VORHANDEN, PRUEFEN, OB SIE SICH ANLEGEN LASSEN
1335	# DIESE AKTIONEN FINDEN NICHT STATT, WENN PROGRAMM AUF REMOTE-MASCHINE
1336	# RECHNET UND DATEI ANSCHLIESSEND TRANSFERIERT WERDEN SOLL!
1337	(( i = 0 ))
1338	while (( i < iout ))
1339	do
1340	(( i = i + 1 ))
1341	if [[ ! ( $fromhost != $localhost && ( "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = tra \|\| "${actionout[$i]}" = trpe ) ) ]]
1342	then
1343	if [[ "${actionout[$i]}" = tr ]]
1344	then
1345	actionout[$i]=""
1346	elif [[ "${actionout[$i]}" = trpe ]]
1347	then
1348	actionout[$i]=pe
1349	elif [[ "${actionout[$i]}" = tra ]]
1350	then
1351	actionout[$i]=a
1352	fi
1353	(( maxcycle = 0 ))
1354	eval filename=${pathout[$i]}/${fname}${endout[$i]}
1355	eval catalogname=${pathout[$i]}
1356	if [[ $(ls $filename* 2>&1 \| grep -c "not found") = 1 \|\| \
1357	$(ls $filename* 2>&1 \| grep -c "No such file") = 1 \|\| \
1358	$(ls $filename* 2>&1 \| grep -c "does not exist") = 1 ]]
1359	then
1360
1361	# OUTPUT-DATEI NICHT VORHANDEN. PRUEFEN, OB ANLEGEN MOEGLICH.
1362	if cat /dev/null > $filename
1363	then
1364	rm $filename
1365	else
1366
1367	# PRUEFEN, OB KATALOG VORHANDEN UND EVTL. DIESEN ANLEGEN
1368	if [[ ! -d $catalogname ]]
1369	then
1370	if mkdir -p $catalogname
1371	then
1372	printf "\n\n *** directory:"
1373	printf "\n $catalogname"
1374	printf "\n was created\n"
1375	else
1376	printf "\n\n +++ OUTPUT-file:"
1377	printf "\n $filename"
1378	printf "\n cannot be created, because directory does not exist"
1379	printf "\n and cannot be created either"
1380	printf "\n"
1381	locat=output ; exit
1382	fi 2>/dev/null
1383	else
1384	printf "\n\n +++ OUTPUT-file:"
1385	printf "\n $filename"
1386	printf "\n cannot be created, although directory exists"
1387	printf "\n"
1388	locat=output ; exit
1389	fi
1390	fi 2>/dev/null
1391	else
1392
1393	# ZYKLUSNUMMER FESTSTELLEN
1394	ls -1 -d $filename > filelist 2>/dev/null
1395	ls -1 -d $filename.* >> filelist 2>/dev/null
1396	while read zeile
1397	do
1398	cycle=$(print $zeile \| cut -f2 -d".")
1399	if [[ "$cycle" = "$zeile" \|\| "$cycle" = ${extout[$i]} ]]
1400	then
1401	(( icycle = 1 ))
1402	else
1403	(( icycle = $cycle + 1 ))
1404	fi
1405	if (( icycle > maxcycle ))
1406	then
1407	(( maxcycle = icycle ))
1408	fi
1409	done <filelist
1410	rm filelist
1411	fi
1412
1413	# EVTL. ZYKLUSNUMMER AN DATEINAMEN ANFUEGEN UND PRUEFEN, OB SICH
1414	# DATEI AUCH WIRKLICH ANLEGEN LAESST. IM APPEND-FALL MUSS AN DEN
1415	# HOECHSTEN VORHANDENEN ZYKLUS-ANGEHAENGT WERDEN. ANLAGEPRUEFUNG
1416	# IST DANN NATUERLICH NICHT ZULAESSIG BZW. MOEGLICH
1417	if [[ "${actionout[$i]}" != a ]]
1418	then
1419	if (( maxcycle > 0 ))
1420	then
1421	filename=${filename}.$maxcycle
1422	if cat /dev/null > $filename
1423	then
1424	rm $filename
1425	else
1426	printf "\n +++ OUTPUT-file:"
1427	printf "\n $filename"
1428	printf "\n cannot be created"
1429	locat=output ; exit
1430	fi
1431	fi
1432	else
1433	(( maxcycle = maxcycle - 1 ))
1434	if (( maxcycle > 0 ))
1435	then
1436	filename=${filename}.$maxcycle
1437	fi
1438	fi
1439
1440	# DATEINAMEN OHNE PFAD ABER MIT ZYKLUSNUMMER ABSPEICHERN,
1441	# DA SPAETER BEI ABLAGE AUF ARCHIVSYSTEM BZW. FUER
1442	# DATEI OUTPUT_FILE_CONNECTIONS EVTL. BENOETIGT
1443	pathout[$i]=$filename
1444	if (( maxcycle > 0 ))
1445	then
1446	frelout[$i]=${fname}${endout[$i]}.$maxcycle
1447	else
1448	frelout[$i]=${fname}${endout[$i]}
1449	fi
1450
1451	fi
1452	done
1453
1454
1455	# DAS DVR-PAKET ERFORDERT EINE ENTSPRECHENDE BIBLIOTHEK
1456	if [[ $(echo $package_list \| grep -c dvrp_graphics) != 0 ]]
1457	then
1458	if [[ "$dvr_inc" = "" ]]
1459	then
1460	printf "\n\n +++ no value for \"dvr_inc\" given in configuration file"
1461	printf "\n This is required for the dvrp_graphics package.\n"
1462	locat=dvr; exit
1463	fi
1464	if [[ "$dvr_lib" = "" ]]
1465	then
1466	printf "\n\n +++ no value for \"dvr_lib\" given in configuration file"
1467	printf "\n This is required for the dvrp_graphics package.\n"
1468	locat=dvr; exit
1469	fi
1470	fi
1471
1472
1473	# PRUEFEN, OB ENTWEDER HAUPTPROGRAMM ODER NUR EIN AUSFUEHRBARES
1474	# PROGRAMM VEREINBART WURDE (IN DIESEM FALL BRAUCHT IM WEITEREN NICHT
1475	# UEBERSETZT ZU WERDEN)
1476	if [[ "$mainprog" = "" && "$executable" = "" ]]
1477	then
1478	printf "\n +++ neither main program nor executable defined"
1479	locat=source; exit
1480	elif [[ "$mainprog" != "" && "$executable" != "" ]]
1481	then
1482	printf "\n +++ main program as well as executable defined"
1483	locat=source; exit
1484	elif [[ "$mainprog" = "" && "$executable" != "" ]]
1485	then
1486	do_compile=false
1487	fi
1488
1489
1490	# SOURCE-VERZEICHNIS ZUM AUFSAMMELN DER ZU UEBERSETZENDEN PROGRAMMTEILE
1491	# ERZEUGEN. HIERHIN WERDEN SPAETER IM FALL VON BATCH-JOBS AUCH DAS MRUN-
1492	# SCRIPTS SOWIE DIE KONFIGURATIONSDATEI KOPIERT
1493	if [[ $restart_run != true && "$SOURCES_COMPLETE" = "" ]]
1494	then
1495	rm -rf SOURCES_FOR_RUN_$fname
1496	mkdir SOURCES_FOR_RUN_$fname
1497	fi
1498
1499
1500	# ALLE ZU UEBERSETZENDEN PROGRAMMTEILE ZUSAMMENSAMMELN
1501	# BEI BATCH-JOBS IST DIES NICHT NOETIG, WEIL DIE PROGRAMMTEILE BEREITS DURCH
1502	# DEN MRUN-AUFRUF ERMITTELT SIND, DER DEN BATCH-JOB GENERIERT HAT, UND
1503	# IM VERZEICHNIS SOURCES_FOR_RUN_... ABGELEGT SIND
1504	if [[ $do_compile = true && "$SOURCES_COMPLETE" = "" ]]
1505	then
1506
1507	[[ "$source_list" = LM ]] && source_list=LOCALLY_MODIFIED
1508	[[ "$source_list" = WP ]] && source_list=WRITE_PERMIT
1509
1510
1511	# EVTL. ZU UEBERSETZENDE PROGRAMMTEILE DADURCH BESTIMMEN, DASS GEPRUEFT
1512	# WIRD, WELCHE DATEIEN WRITE-PERMIT BESITZEN (DATEIEN SOLLTEN DESHALB
1513	# UNTER RCS-KONTROLLE STEHEN). MIT DER VARIABLEN EXCLUDE KOENNEN
1514	# BESTIMMTE DATEIEN GRUNDSAETZLICH VON DER UEBERSETZUNG AUSGESCHLOSSEN
1515	# WERDEN. DIES IST NUR BEI MANUELLEM START VON MRUN DURCH DEN BENUTZER
1516	# MOEGLICH, DA BEI AUTOMATISCHEN RESTARTS TEST DURCH DIE TATSAECHLICH
1517	# ZU UBERSETZENDEN DATEIEN ERSETZT IST.
1518	# ALLE ERMITTELTEN DATEIEN WERDEN IM VERZEICHNIS SOURCES_FOR_RUN_...
1519	# GESAMMELT
1520	if [[ "$source_list" = WRITE_PERMIT ]]
1521	then
1522
1523	source_list=""
1524	cd $source_path
1525
1526
1527	# ALLE MOEGLICHEN QUELLCODEDATEIEN AUFLISTEN
1528	Names=$(ls -1 *.f90 2>&1)
1529	[[ $(echo $Names \| grep -c '*.f90') = 0 ]] && Filenames="$Names"
1530	Names=$(ls -1 *.F90 2>&1)
1531	[[ $(echo $Names \| grep -c '*.F90') = 0 ]] && Filenames="$Filenames $Names"
1532	Names=$(ls -1 *.F 2>&1)
1533	[[ $(echo $Names \| grep -c '*.F') = 0 ]] && Filenames="$Filenames $Names"
1534	Names=$(ls -1 *.f 2>&1)
1535	[[ $(echo $Names \| grep -c '*.f') = 0 ]] && Filenames="$Filenames $Names"
1536	Names=$(ls -1 *.c 2>&1)
1537	[[ $(echo $Names \| grep -c '*.c') = 0 ]] && Filenames="$Filenames $Names"
1538
1539
1540	# DATEIEN MIT WRITE-PERMIT NACH SOURCES_FOR_RUN_... KOPIEREN
1541	for dateiname in $Filenames
1542	do
1543	if [[ -w $dateiname ]]
1544	then
1545	if [[ "$exclude" = "" \|\| $(echo $exclude \| grep -c $dateiname) = 0 ]]
1546	then
1547	cp $dateiname $working_directory/SOURCES_FOR_RUN_$fname
1548	source_list=$source_list"$dateiname "
1549	fi
1550	fi
1551	done
1552
1553	cd - > /dev/null
1554
1555
1556	elif [[ "$source_list" = LOCALLY_MODIFIED ]]
1557	then
1558
1559	# MODIFIZIERTE DATEIEN DER SVN-ARBEITSKOPIE BESTIMMEN
1560	source_list=""
1561	cd $source_path
1562
1563
1564	# PRUEFEN, OB VERZEICHNIS UEBERHAUPT UNTER SVN-KONTROLLE STEHT
1565	if [[ ! -d .svn ]]
1566	then
1567	printf "\n\n +++ source directory"
1568	printf "\n \"$source_path\" "
1569	printf "\n is not under control of \"subversion\"."
1570	printf "\n Please do not use mrun-option \"-s LOCALLY_MODIFIED\"\n"
1571	fi
1572
1573
1574	# ALLE MODIFIZIERTEN QUELLCODEDATEIEN AUFLISTEN
1575	Filenames=""
1576	svn status > tmp_mrun
1577	while read line
1578	do
1579	firstc=`echo $line \| cut -c1`
1580	if [[ $firstc = M \|\| $firstc = "?" ]]
1581	then
1582	Name=`echo "$line" \| cut -c8-`
1583	extension=`echo $Name \| cut -d. -f2`
1584	if [[ "$extension" = f90 \|\| "$extension" = F90 \|\| "$extension" = f \|\| "$extension" = F \|\| "$extension" = c ]]
1585	then
1586	Filenames="$Filenames "$Name
1587	fi
1588	fi
1589	done < tmp_mrun
1590
1591
1592	# DATEIEN NACH SOURCES_FOR_RUN_... KOPIEREN
1593	for dateiname in $Filenames
1594	do
1595	cp $dateiname $working_directory/SOURCES_FOR_RUN_$fname
1596	source_list=$source_list"$dateiname "
1597	done
1598
1599	cd - > /dev/null
1600
1601
1602	# MITTELS OPTION -s ANGEGEBENE DATEIEN NACH SOURCES_FOR_RUN_... KOPIEREN
1603	# BEI AUTOMATISCHEN FORTSETZUNGSLAEUFEN SIND DORT SCHON ALLE DATEIEN
1604	# VORHANDEN
1605	elif [[ "$source_list" != "" && $restart_run != true ]]
1606	then
1607
1608	cd $source_path
1609
1610	for filename in $source_list
1611	do
1612
1613	# QUELLTEXT-DATEI DARF KEINE PFADE BEINHALTEN
1614	if [[ $(print $filename \| grep -c "/") != 0 ]]
1615	then
1616	printf "\n +++ source code file: $filename"
1617	printf "\n must not contain (\"/\") "
1618	locat=source; exit
1619	fi
1620
1621	if [[ ! -f $filename ]]
1622	then
1623	printf "\n +++ source code file: $filename"
1624	printf "\n does not exist"
1625	locat=source; exit
1626	else
1627	cp $filename $working_directory/SOURCES_FOR_RUN_$fname
1628	fi
1629
1630	done
1631
1632	cd - > /dev/null
1633
1634	fi
1635
1636
1637	# PRUEFEN, OB ENTWEDER HAUPTPROGRAMM VORHANDEN UND ES EVTL. IN DER
1638	# LISTE DER ZU UEBERSETZENDEN PROGRAMMTEILE MIT ENTHALTEN IST (WENN
1639	# NICHT, WIRD ES DIESER LISTE HINZUGEFUEGT)
1640	if [[ $restart_run != true ]]
1641	then
1642
1643	if [[ ! -f "$source_path/$mainprog" ]]
1644	then
1645	printf "\n\n +++ main program: $mainprog"
1646	printf "\n does not exist in source directory"
1647	printf "\n \"$source_path\"\n"
1648	locat=source; exit
1649	else
1650	if [[ $(echo $source_list \| grep -c $mainprog) = 0 ]]
1651	then
1652	cp $source_path/$mainprog SOURCES_FOR_RUN_$fname
1653	source_list=${mainprog}" $source_list"
1654	fi
1655	fi
1656	fi
1657
1658
1659	# MAKEFILE AUF VORHANDENSEIN PRUEFEN UND KOPIEREN
1660	# BEI RESTART-LAEUFEN LIEGT ES SCHON IM VERZEICHNIS SOURCES_FOR_RUN...
1661	if [[ "$restart_run" != true ]]
1662	then
1663	[[ "$makefile" = "" ]] && makefile=$source_path/Makefile
1664	if [[ ! -f $makefile ]]
1665	then
1666	printf "\n +++ file \"$makefile\" does not exist"
1667	locat=make; exit
1668	else
1669	cp $makefile SOURCES_FOR_RUN_$fname/Makefile
1670	fi
1671	fi
1672
1673
1674	# DATEIEN AUS ZUSAETZLICHEM QUELLVERZEICHNIS HINZUFUEGEN
1675	if [[ $restart_run != true && "$add_source_path" != "" ]]
1676	then
1677
1678	# GIBT ES DAS VERZEICHNIS UEBERHAUPT?
1679	if [[ ! -d $add_source_path ]]
1680	then
1681	printf "\n\n +++ WARNING: additional source code directory"
1682	printf "\n \"$add_source_path\" "
1683	printf "\n does not exist or is not a directory."
1684	printf "\n No source code will be used from this directory!\n"
1685	add_source_path=""
1686	sleep 3
1687	else
1688
1689	cd $add_source_path
1690	found=false
1691
1692	Names=$(ls -1 *.f90 2>&1)
1693	[[ $(echo $Names \| grep -c '*.f90') = 0 ]] && AddFilenames="$Names"
1694	Names=$(ls -1 *.F90 2>&1)
1695	[[ $(echo $Names \| grep -c '*.F90') = 0 ]] && AddFilenames="$AddFilenames $Names"
1696	Names=$(ls -1 *.F 2>&1)
1697	[[ $(echo $Names \| grep -c '*.F') = 0 ]] && AddFilenames="$AddFilenames $Names"
1698	Names=$(ls -1 *.f 2>&1)
1699	[[ $(echo $Names \| grep -c '*.f') = 0 ]] && AddFilenames="$AddFilenames $Names"
1700	Names=$(ls -1 *.c 2>&1)
1701	[[ $(echo $Names \| grep -c '*.c') = 0 ]] && AddFilenames="$AddFilenames $Names"
1702
1703	cd - > /dev/null
1704	cd SOURCES_FOR_RUN_$fname
1705
1706	# COPY MAKEFILE IF EXISTING
1707	if [[ -f $add_source_path/Makefile ]]
1708	then
1709	printf "\n\n *** user Makefile from directory"
1710	printf "\n \"$add_source_path\" is used \n"
1711	sleep 1
1712	cp $add_source_path/Makefile .
1713	fi
1714
1715	for dateiname in $AddFilenames
1716	do
1717	if [[ -f $dateiname ]]
1718	then
1719	printf "\n +++ source code file \"$dateiname\" found in additional"
1720	printf "\n source code directory \"$add_source_path\" "
1721	printf "\n but was also given with option \"-s\" which means that it should be taken"
1722	printf "\n from directory \"$source_path\"."
1723	locat=source; exit
1724	fi
1725
1726	cp $add_source_path/$dateiname .
1727	source_list="$source_list $dateiname"
1728
1729	# CHECK IF FILE IS CONTAINED IN MAKEFILE
1730	if [[ $(grep -c $dateiname Makefile) = 0 ]]
1731	then
1732	printf "\n\n +++ user file \"$dateiname\" "
1733	printf "\n is not listed in Makefile \n"
1734	locat=source; exit
1735	else
1736
1737	# Default User-Interface von der Liste entfernen, falls Datei
1738	# ein User-Interface enthaelt
1739	# if [[ $( cat $dateiname \| grep -c "END SUBROUTINE user_parin" ) != 0 ]]
1740	# then
1741	# if [[ $dateiname != user_interface.f90 && -f user_interface.f90 ]]
1742	# then
1743	# rm -rf user_interface.f90
1744	# source_list=`echo $source_list \| sed -e 's/user_interface.f90//'`
1745	# printf "\n\n *** default \"user_interface.f90\" removed from the files to be translated"
1746	# printf "\n since a user-interface is found in file"
1747	# printf "\n \"$add_source_path/$dateiname\" \n"
1748	# sleep 3
1749	# else
1750	if [[ $found = false ]]
1751	then
1752	found=true
1753	printf "\n\n *** following user file(s) added to the"
1754	printf " files to be translated:\n "
1755	fi
1756	printf "$dateiname "
1757	sleep 0.5
1758	fi
1759	done
1760	[[ $found = true ]] && printf "\n"
1761	cd - > /dev/null
1762	fi
1763	fi
1764
1765
1766	# ALLE UNTERPROGRAMME, DIE ZU VEREINBARTEN SOFTWAREPAKETEN GEHOEREN,
1767	# DER LISTE DER ZU UEBERSETZENDEN DATEIEN HINZUFUEGEN
1768	if [[ $restart_run != true && -n $package_list ]]
1769	then
1770
1771	cd $source_path
1772
1773	for package in $package_list
1774	do
1775
1776	[[ $package = "dvrp_graphics+1PE" ]] && package=dvrp_graphics
1777
1778	# ERMITTELE ALLE DATEIEN, DIE ZUM PAKET GEHOEREN
1779	# FEHLERMELDUNGEN WERDEN ABGEFANGEN, DA * AUCH VERZEICHNISSNAMEN
1780	# LIEFERT
1781	package_source_list=`grep "defined( __$package " * 2>/dev/null \| cut -f1 -d:`
1782
1783
1784	# FUEGE DIESE DATEIEN DER LISTE DER ZU UEBERSETZENDEN DATEIEN
1785	# HINZU, FALLS SIE NOCH NICHT DAZUGEHOEREN
1786	for source_list_name in $package_source_list
1787	do
1788	if [[ $(echo $source_list \| grep -c $source_list_name) = 0 ]]
1789	then
1790
1791	# NUR DATEIEN MIT GUELTIGEN ENDUNGEN VERWENDEN
1792	ending=`echo $source_list_name \| cut -f2 -d.`
1793	if [[ "$ending" = f90 \|\| "$ending" = F90 \|\| "$ending" = f \|\| "$ending" = F \|\| "$ending" = c ]]
1794	then
1795	cp $source_list_name $working_directory/SOURCES_FOR_RUN_$fname
1796	source_list="$source_list $source_list_name"
1797	fi
1798	fi
1799	done
1800	done
1801
1802	cd - > /dev/null
1803	fi
1804
1805
1806	# MAKEFILE AUF VORHANDENSEIN PRUEFEN UND KOPIEREN
1807	# BEI RESTART-LAEUFEN LIEGT ES SCHON IM VERZEICHNIS SOURCES_FOR_RUN...
1808	# if [[ "$restart_run" != true ]]
1809	# then
1810	# [[ "$makefile" = "" ]] && makefile=$source_path/Makefile
1811	# if [[ ! -f $makefile ]]
1812	# then
1813	# printf "\n +++ file \"$makefile\" does not exist"
1814	# locat=make; exit
1815	# else
1816	# cp $makefile SOURCES_FOR_RUN_$fname/Makefile
1817	# fi
1818	# fi
1819
1820	fi # do_compile=true
1821
1822
1823	# FALLS PROGRAMMTEILE UEBERSETZT WERDEN SOLLEN, FOLGEN JETZT EINIGE
1824	# UEBERPRUEFUNGEN UND DAS SETZEN DER PRAEPROZESSOR-DIREKTIVEN
1825	if [[ $do_compile = true ]]
1826	then
1827
1828	# PRAEPROZESSOR-DIREKTIVEN ZUM SELEKTIVEN AUSWAEHLEN VON CODETEILEN
1829	# ZUSAMMENSETZEN
1830	# DIREKTIVEN ZUM AKTIVIEREN VON RECHNERSPEZIFISCHEM CODE
1831	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1832	then
1833	cpp_options="${cpp_options},-D__ibm=__ibm"
1834	elif [[ $(echo $localhost \| cut -c1-3) = nec ]]
1835	then
1836	cpp_options="$cpp_options -D__nec"
1837	elif [[ $(echo $localhost \| cut -c1-2) = lc ]]
1838	then
1839	cpp_options="$cpp_options -D__lc"
1840	else
1841	cpp_options="$cpp_options -D__$localhost"
1842	fi
1843
1844	# DIREKTIVEN DIE DURCH OPTION -K BESTIMMT WERDEN (Z.B. PARALLEL)
1845	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1846	then
1847	[[ -n $cond1 ]] && cpp_options="${cpp_options},-D__$cond1=__$cond1"
1848	[[ -n $cond2 ]] && cpp_options="${cpp_options},-D__$cond2=__$cond2"
1849	else
1850	[[ -n $cond1 ]] && cpp_options="$cpp_options -D__$cond1"
1851	[[ -n $cond2 ]] && cpp_options="$cpp_options -D__$cond2"
1852	fi
1853
1854	# DIREKTIVEN DIE SOFTWAREPAKETE AKTIVIEREN (OPTION -p)
1855	if [[ -n $package_list ]]
1856	then
1857	for package in $package_list
1858	do
1859	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1860	then
1861	if [[ $package != "dvrp_graphics+1PE" ]]
1862	then
1863	cpp_options="${cpp_options},-D__$package=__$package"
1864	else
1865	cpp_options="${cpp_options},-D__dvrp_graphics=__dvrp_graphics"
1866	export use_seperate_pe_for_dvrp_output=true
1867	fi
1868	else
1869	if [[ $package != "dvrp_graphics+1PE" ]]
1870	then
1871	cpp_options="$cpp_options -D__$package"
1872	else
1873	cpp_options="$cpp_options -D__dvrp_graphics"
1874	export use_seperate_pe_for_dvrp_output=true
1875	fi
1876	fi
1877	done
1878	fi
1879
1880	# DIREKTIVEN DIE DURCH OPTION -D FESTGELEGT SIND
1881	if [[ -n $cpp_opts ]]
1882	then
1883	for popts in $cpp_opts
1884	do
1885	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1886	then
1887	cpp_options="${cpp_options},-D__$popts=__$popts"
1888	else
1889	cpp_options="$cpp_options -D__$popts"
1890	fi
1891	done
1892	fi
1893
1894	else
1895
1896
1897	# BEI LOKALEN RECHNUNGEN PRUEFEN, OB EXECUTABLE VORHANDEN
1898	if [[ $do_remote = false ]]
1899	then
1900	if [[ ! -f $executable ]]
1901	then
1902	printf "\n +++ executable file: $executable"
1903	printf "\n does not exist"
1904	locat=executable; exit
1905	fi
1906	fi
1907	fi
1908
1909
1910	# JOBMODUS FESTSTELLEN
1911	if [[ "$ENVIRONMENT" = BATCH && $localhost != lctit \|\| "$QUEUE" != interactive && $localhost = lctit ]]
1912	then
1913	jobmo=BATCH
1914	else
1915	jobmo=INTERACTIVE
1916	fi
1917
1918
1919	# HOSTSPEZIFISCHE DEFAULT-COMPILER SETZEN, FALLS NICHT BEREITS
1920	# DURCH BENUTZER ANDERWEITIG VEREINBART
1921	if [[ "$compiler_name" = "" ]]
1922	then
1923
1924	printf "\n +++ no compiler specified for \"$host $cond1 $cond2\""
1925	locat=compiler_name; exit
1926
1927	fi
1928
1929
1930	# COMPILER AUF RIAMS NEC UEBERSCHREIBEN
1931	[[ $localhost = necriam ]] && compiler_name=mpif90
1932
1933
1934
1935	# TEMPORAEREN KATALOGNAMEN BESTIMMEN
1936	kennung=$RANDOM
1937	if [[ "$tmp_user_catalog" = "" ]]
1938	then
1939	if [[ $localhost = ibmh ]]
1940	then
1941	tmp_user_catalog=$SCRATCH
1942	elif [[ $localhost = nech ]]
1943	then
1944	tmp_user_catalog=$WRKSHR
1945	else
1946	tmp_user_catalog=/tmp
1947	fi
1948	fi
1949	TEMPDIR=$tmp_user_catalog/${usern}.$kennung
1950
1951
1952	# KATALOGNAMEN FUER ZWISCHENSPEICHERUNG VON FORTSETZUNGSLAUFDATEIEN
1953	# BESTIMMEN
1954	if [[ "$tmp_data_catalog" = "" ]]
1955	then
1956	if [[ $localhost = ibmb ]]
1957	then
1958	tmp_data_catalog=$WORK/mrun_restart_data
1959	elif [[ $localhost = nech ]]
1960	then
1961	tmp_data_catalog=$WRKSHR/mrun_restart_data
1962	else
1963	tmp_data_catalog=/tmp/mrun_restart_data
1964	fi
1965	fi
1966
1967
1968	# EVENTUELL BEI LOKALEN RECHNUNGEN $-ZEICHEN IN ENVIRONMENT-VARIABLEN
1969	# ERSETZEN
1970	if [[ $do_remote = false && $do_compile = true ]]
1971	then
1972	eval fopts=\"$fopts\"
1973	eval lopts=\"$lopts\"
1974	fi
1975
1976
1977
1978	# COMPILE- UND LINK-OPTIONEN BESTIMMEN
1979	fopts="$fopts $netcdf_inc $dvr_inc"
1980	lopts="$lopts $netcdf_lib $dvr_lib"
1981	ROPTS="$ropts"
1982	if [[ ( $(echo $host \| cut -c1-3) = nec \|\| $(echo $host \| cut -c1-3) = ibm \|\| $host = lcsgih \|\| $host = lcsgib \|\| $host = lctit \|\| $host = lcfimm \|\| $host = lcxt4 ) && -n $numprocs ]]
1983	then
1984	XOPT="-X $numprocs"
1985	fi
1986
1987
1988
1989	# PRUEFEN DER CPU-ZEIT. (CPUMAX WIRD ALS ENV-VARIABLE VOM HAUTPRO-
1990	# GRAMM BENOETIGT
1991	done=false
1992	while [[ $done = false ]]
1993	do
1994	cputime=$cpumax
1995	if (( $cputime == 0 ))
1996	then
1997	if [[ $do_batch = true ]]
1998	then
1999	printf "\n +++ cpu-time is undefined"
2000	printf "\n >>> Please type CPU-time in seconds as INTEGER:"
2001	printf "\n >>> "
2002	read cputime 1>/dev/null 2>&1
2003	else
2004	cputime=10000000 # NO CPU LIMIT FOR INTERACTIVE RUNS
2005	fi
2006	else
2007	done=true
2008	fi
2009	cpumax=$cputime
2010	done
2011
2012	(( minuten = cputime / 60 ))
2013	(( sekunden = cputime - minuten * 60 ))
2014
2015
2016	# PRUEFEN DER KERNSPEICHERANFORDERUNG
2017	if [[ $do_batch = true ]]
2018	then
2019	done=false
2020	while [[ $done = false ]]
2021	do
2022	if (( memory == 0 ))
2023	then
2024	printf "\n +++ memory demand is undefined"
2025	printf "\n >>> Please type memory in MByte per process as INTEGER:"
2026	printf "\n >>> "
2027	read memory 1>/dev/null 2>&1
2028	else
2029	done=true
2030	fi
2031	done
2032	fi
2033
2034
2035	# PRUEFEN, OB FUER REMOTE-RECHNUNGEN EIN BENUTZERNAME ANGEGEBEN WURDE
2036	if [[ $do_remote = true && -z $remote_username ]]
2037	then
2038	while [[ -z $remote_username ]]
2039	do
2040	printf "\n +++ username on remote host \"$host\" is undefined"
2041	printf "\n >>> Please type username:"
2042	printf "\n >>> "
2043	read remote_username
2044	done
2045	mc="$mc -u$remote_username"
2046	fi
2047
2048
2049	# SET DEFAULT VALUE FOR MPI MODULE TO BE USED ON SGI-ALTIX
2050	if [[ $host = lcsgib \|\| $host = lcsgih ]]
2051	then
2052	[[ "$mpilib" = "" ]] && export mpilib=mpt
2053	fi
2054
2055
2056
2057	###########################################################################
2058	# HEADER-AUSGABE
2059	###########################################################################
2060
2061
2062	calltime=$(date)
2063	printf "\n"
2064	# [[ $silent = false ]] && clear
2065	printf "#--------------------------------------------------------------# \n"
2066	printf "\| $version$calltime \| \n"
2067	printf "\| \| \n"
2068	spalte1="called on:"; spalte2=$localhost_realname
2069	printf "\| $spalte1$spalte2 \| \n"
2070	if [[ $local_compile = false ]]
2071	then
2072	if [[ $do_remote = true ]]
2073	then
2074	spalte1="execution on:"; spalte2="$host (username: $remote_username)"
2075	else
2076	spalte1="execution on:"; spalte2="$host ($localhost_realname)"
2077	fi
2078	else
2079	spalte1="compiling test only!"; spalte2=""
2080	fi
2081	printf "\| $spalte1$spalte2 \| \n"
2082	if [[ -n $numprocs ]]
2083	then
2084	spalte1="number of PEs:"; spalte2=$numprocs
2085	printf "\| $spalte1$spalte2 \| \n"
2086	fi
2087	if [[ -n $tasks_per_node ]]
2088	then
2089	spalte1="tasks per node:"; spalte2="$tasks_per_node (number of nodes: $nodes)"
2090	printf "\| $spalte1$spalte2 \| \n"
2091	fi
2092	if [[ $threads_per_task != 1 ]]
2093	then
2094	spalte1="threads per task:"; spalte2="$threads_per_task"
2095	printf "\| $spalte1$spalte2 \| \n"
2096	fi
2097	printf "\| \| \n"
2098	if [[ $do_compile = true ]]
2099	then
2100	spalte1=cpp-directives:; spalte2=$cpp_options
2101	printf "\| $spalte1$spalte2 \| \n"
2102	zeile=$(echo "$cpp_options" \| cut -c41-)
2103	while [[ "$zeile" != "" ]]
2104	do
2105	spalte1=""
2106	spalte2=$zeile
2107	printf "\| $spalte1$spalte2 \| \n"
2108	zeile=$(echo "$zeile" \| cut -c41-)
2109	done
2110
2111	spalte1=compiler-options:; spalte2="$fopts"
2112	printf "\| $spalte1$spalte2 \| \n"
2113	zeile=$(echo "$fopts" \| cut -c41-)
2114	while [[ "$zeile" != "" ]]
2115	do
2116	spalte1=""
2117	spalte2=$zeile
2118	printf "\| $spalte1$spalte2 \| \n"
2119	zeile=$(echo "$zeile" \| cut -c41-)
2120	done
2121
2122	spalte1=linker-options:; spalte2=$lopts
2123	printf "\| $spalte1$spalte2 \| \n"
2124	zeile=$(echo "$lopts" \| cut -c41-)
2125	while [[ "$zeile" != "" ]]
2126	do
2127	spalte1=""
2128	spalte2=$zeile
2129	printf "\| $spalte1$spalte2 \| \n"
2130	zeile=$(echo "$zeile" \| cut -c41-)
2131	done
2132
2133	spalte1="main program":; spalte2=$mainprog
2134	printf "\| $spalte1$spalte2 \| \n"
2135	else
2136	spalte1=executable:; spalte2=$executable
2137	printf "\| $spalte1$spalte2 \| \n"
2138	fi
2139	printf "\| \| \n"
2140	spalte1="base name of files":; spalte2=$fname
2141	printf "\| $spalte1$spalte2 \| \n"
2142	if [[ $fname != $afname ]]
2143	then
2144	spalte1="base name of input files":; spalte2=$afname
2145	printf "\| $spalte1$spalte2 \| \n"
2146	fi
2147	spalte1="INPUT control list":; spalte2=$input_list
2148	printf "\| $spalte1$spalte2 \| \n"
2149	spalte1="OUTPUT control list":; spalte2=$output_list
2150	printf "\| $spalte1$spalte2 \| \n"
2151
2152	if [[ $do_batch = true \|\| "$LOADLBATCH" = yes ]]
2153	then
2154	spalte1="memory demand / PE":; spalte2="$memory MB"
2155	printf "\| $spalte1$spalte2 \| \n"
2156	spalte1=CPU-time:; spalte2="$minuten:$sekunden"
2157	printf "\| $spalte1$spalte2 \| \n"
2158	fi
2159
2160	if [[ $do_compile = true ]]
2161	then
2162	printf "\| \| \n"
2163	printf "\| Files to be compiled: \| \n"
2164	zeile=$source_list
2165	while [[ "$zeile" != "" ]]
2166	do
2167	spalte3=$zeile
2168	printf "\| $spalte3 \| \n"
2169	zeile=$(echo "$zeile" \| cut -c61-)
2170	done
2171	fi
2172	printf "#--------------------------------------------------------------#"
2173
2174
2175
2176	# BEDINGTE AUSGABE DER DATEIVERBINDUNGEN
2177	if [[ $do_trace = true ]]
2178	then
2179	(( i = 0 ))
2180	while (( i < iin ))
2181	do
2182	(( i = i + 1 ))
2183	if (( i == 1 ))
2184	then
2185	printf "\n\n >>> INPUT-file assignments:\n"
2186	fi
2187	printf "\n ${localin[$i]} : ${absnamein[$i]}"
2188	done
2189	(( i = 0 ))
2190	while (( i < iout ))
2191	do
2192	(( i = i + 1 ))
2193	if (( i == 1 ))
2194	then
2195	printf "\n\n >>> OUTPUT-file assignments:\n"
2196	fi
2197	printf "\n ${localout[$i]} : ${pathout[$i]}"
2198	done
2199	(( i = 0 ))
2200	while (( i < iic ))
2201	do
2202	(( i = i + 1 ))
2203	if (( i == 1 ))
2204	then
2205	printf "\n\n >>> INPUT-commands:\n"
2206	fi
2207	printf "\n ${in_command[$i]}"
2208	done
2209	(( i = 0 ))
2210	while (( i < ioc ))
2211	do
2212	(( i = i + 1 ))
2213	if (( i == 1 ))
2214	then
2215	printf "\n\n >>> OUTPUT-commands:\n"
2216	fi
2217	printf "\n ${out_command[$i]}"
2218	done
2219	fi
2220
2221
2222	# ABFRAGEN BEI AUFRUF AUF LOKALER MASCHINE
2223	if [[ $remotecall = false && $silent = false && $jobmo != BATCH ]]
2224	then
2225	antwort=dummy
2226	printf "\n\n"
2227	while [[ "$antwort" != y && "$antwort" != Y && "$antwort" != n && "$antwort" != N ]]
2228	do
2229	printf " >>> everything o.k. (y/n) ? "
2230	read antwort
2231	done
2232	if [[ $antwort = n \|\| $antwort = N ]]
2233	then
2234	locat=user_abort; (( iec = 0 )); exit
2235	fi
2236	if [[ $do_batch = true ]]
2237	then
2238	printf " >>> batch-job will be created and submitted"
2239	else
2240	if [[ $local_compile = false ]]
2241	then
2242	printf " >>> MRUN will now continue to execute on this machine"
2243	else
2244	printf " >>> a test compilation will now be carried out on this machine"
2245	fi
2246	fi
2247	fi
2248
2249
2250
2251
2252	# FALLS AUF DIESER MASCHINE GERECHNET WERDEN SOLL, WERDEN JETZT ENTSPRE-
2253	# CHENDE AKTIONEN DURCHGEFUEHRT
2254	if [[ $do_batch = false ]]
2255	then
2256
2257
2258	# TEMPORAEREN KATALOG ERZEUGEN
2259	mkdir -p $TEMPDIR
2260	chmod go+rx $TEMPDIR
2261	tmpcreate=true
2262
2263
2264	# SAEMTLICHE QUELLTEXT-DATEIEN BZW. AUSFUEHRBARES PROGRAMM IN
2265	# TEMPORAERES VERZEICHNIS KOPIEREN
2266	if [[ $do_compile = true ]]
2267	then
2268
2269	# ON NEC, COMPILATION IS DONE ON HOST CROSS VIA CROSS COMPILING
2270	# CREATE A TEMPORARY DIRECTORY ON THAT MACHINE (HOME MOUNTED VIA NFS)
2271	if [[ $localhost = nech ]]
2272	then
2273	TEMPDIR_COMPILE=$HOME/work/${usern}.$kennung
2274	if mkdir -p $TEMPDIR_COMPILE
2275	then
2276	printf "\n *** \"$TEMPDIR_COMPILE\" "
2277	printf "\n is generated as temporary directory for cross compiling\n"
2278	else
2279	printf "\n +++ creating directory \"$TEMPDIR_COMPILE\" "
2280	printf "\n needed for cross compilation failed"
2281	locat=compile
2282	exit
2283	fi
2284	else
2285	TEMPDIR_COMPILE=$TEMPDIR
2286	fi
2287
2288
2289	# PFADNAMEN FUER DAS MAKE-DEPOSITORY ERMITTELN
2290	line=""
2291	grep "%depository_path" $config_file > tmp_mrun
2292	while read line
2293	do
2294	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
2295	then
2296	if [[ "$(echo $line \| cut -d" " -s -f3)" = "" ]]
2297	then
2298	global_depository_path=`echo $line \| cut -d" " -s -f2`
2299	fi
2300	fi
2301	done < tmp_mrun
2302
2303	line=""
2304	grep " $localhost" $config_file \| grep "%depository_path" > tmp_mrun
2305	while read line
2306	do
2307	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
2308	then
2309	if [[ "$(echo $line \| cut -d" " -s -f4)" = "$cond1" && "$(echo $line \| cut -d" " -s -f5)" = "$cond2" ]]
2310	then
2311	local_depository_path=`echo $line \| cut -d" " -s -f2`
2312	fi
2313	fi
2314	done < tmp_mrun
2315
2316	if [[ "$local_depository_path" = "" ]]
2317	then
2318	if [[ "$global_depository_path" != "" ]]
2319	then
2320	local_depository_path=$global_depository_path
2321	else
2322	printf "\n\n +++ no depository path found in configuration file"
2323	printf "\n for local host \"$localhost\" "
2324	printf "\n please set \"\%depository_path\" in configuration file\n"
2325	locat=config_file; exit
2326	fi
2327	fi
2328	eval local_depository_path=$local_depository_path
2329	[[ "$cond1" != "" ]] && local_depository_path=${local_depository_path}_$cond1
2330	[[ "$cond2" != "" ]] && local_depository_path=${local_depository_path}_$cond2
2331
2332
2333	basename=`print $mainprog \| cut -f1 -d"."`
2334	eval make_depository=${local_depository_path}/${basename}_current_version.tar
2335	if [[ ! -f $make_depository ]]
2336	then
2337	printf "\n"
2338	printf "\n *** WARNING: make depository \"$make_depository\" not found"
2339	printf "\n \"make\" will fail, if the Makefile or other source files are missing\n"
2340	else
2341	cp $make_depository $TEMPDIR_COMPILE
2342	cd $TEMPDIR_COMPILE
2343	tar -xf $make_depository > /dev/null 2>&1
2344	cd - > /dev/null
2345	fi
2346
2347	cp SOURCES_FOR_RUN_$fname/* $TEMPDIR_COMPILE
2348
2349	# FALLS USER-INTERFACE VORHANDEN UND AUF DATEI MIT ANDEREM NAMEN
2350	# ALS user_interface.f90 LIEGT, DIESEN GEAENDERTEN NAMEN INS
2351	# MAKEFILE EINTRAGEN
2352	# cd $TEMPDIR_COMPILE
2353	# interface_file=`grep -l "END SUBROUTINE user_parin" $source_list`
2354	# if [[ "$interface_file" != "" ]]
2355	# then
2356	# interface_file=`echo $interface_file \| cut -d"." -f1`
2357	# mv Makefile Makefile_old
2358	# sed "s/user_interface/$interface_file/g" Makefile_old > Makefile
2359	# fi
2360	# cd - > /dev/null
2361	else
2362	cp $executable ${TEMPDIR}/a.out
2363	fi
2364
2365
2366	# WECHSEL IN TEMPORAEREN KATALOG
2367	cd $TEMPDIR
2368	printf "\n *** changed to temporary directory: $TEMPDIR"
2369
2370
2371	# OUTPUT-DATEI-VERBINDUNGEN AUF TEMPORAERER DATEI ABLEGEN
2372	# DIESE DATEI KANN VON SPAETER AUFZURUFENDEN BENUTZERPROZEDUREN GELESEN
2373	# WERDEN, UM ZU LOKALEN DATEINAMEN GEHOERENDE PERMANENTE NAMEN ZU
2374	# ERMITTELN
2375	(( i = 0 ))
2376	while (( i < iout ))
2377	do
2378	(( i = i + 1 ))
2379	if [[ "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = tra \|\| "${actionout[$i]}" = trpe ]]
2380	then
2381	printf "${localout[$i]} ${actionout[$i]}\n${pathout[$i]}\n${localhost}_${fname}${endout[$i]}\n" >> OUTPUT_FILE_CONNECTIONS
2382	else
2383	printf "${localout[$i]} ${actionout[$i]}\n${pathout[$i]}\n${frelout[$i]}\n" >> OUTPUT_FILE_CONNECTIONS
2384	fi
2385	done
2386
2387
2388	# EVTL. UEBERSETZUNGSAKTIONEN STARTEN
2389	if [[ $do_compile = true ]]
2390	then
2391
2392
2393	# COMPILING WITH MAKE (ON NEC COMPILER IS CALLED ON HOST CROSS)
2394	printf "\n\n\n *** compilation starts \n$striche\n"
2395	printf " *** compilation with make using following options:\n"
2396	printf " make depository: $make_depository"
2397	printf " compilername: $compiler_name\n"
2398	printf " options: $fopts\n"
2399	printf " preprocessor-directives: $cpp_options \n"
2400	printf " linker-options: $lopts \n"
2401	printf " source code files: $source_list \n"
2402
2403	if [[ $localhost = nech ]]
2404	then
2405	ssh 136.172.44.192 -l $usern ". /SX/opt/etc/initsx.sh; cd \$HOME/work/${usern}.$kennung; sxmake -f Makefile PROG=a.out F90=$compiler_name COPT=\"$cpp_options\" F90FLAGS=\"$fopts\" LDFLAGS=\"$lopts\" "
2406	cp $TEMPDIR_COMPILE/a.out .
2407	[[ $? != 0 ]] && compile_error=true
2408	rm -rf $TEMPDIR_COMPILE
2409	elif [[ $localhost = ibmh ]]
2410	then
2411	printf " compiler is called via ssh on \"plogin1\" \n"
2412	ssh plogin1 -l $usern "export PATH=/sw/ibm/xlf/12.1.0.3/usr/bin:$PATH; cd $TEMPDIR; make -f Makefile PROG=a.out F90=$compiler_name COPT=\"$cpp_options\" F90FLAGS=\"$fopts\" LDFLAGS=\"$lopts\" "
2413	[[ ! -f a.out ]] && compile_error=true
2414	continue # ANDERENFALLS IST STATUS=1, FALLS A.OUT VORHANDEN
2415	elif [[ $localhost = lcsgib ]]
2416	then
2417	printf " compiler is called via ssh on \"bicegate\" using module \"$mpilib\" \n"
2418	ssh 130.73.232.103 -l $usern ". /usr/share/modules/init/bash; module load $mpilib; cd $TEMPDIR; make -f Makefile PROG=a.out F90=$compiler_name COPT=\"$cpp_options\" F90FLAGS=\"$fopts\" LDFLAGS=\"$lopts\" "
2419	[[ ! -f a.out ]] && compile_error=true
2420	continue # ANDERENFALLS IST STATUS=1, FALLS A.OUT VORHANDEN
2421	elif [[ $localhost = lcsgih ]]
2422	then
2423	printf " compiler is called via ssh on \"hicegate2\" using module \"$mpilib\" \n"
2424	ssh 130.75.4.103 -l $usern ". /usr/share/modules/init/bash; module load $mpilib; cd $TEMPDIR; make -f Makefile PROG=a.out F90=$compiler_name COPT=\"$cpp_options\" F90FLAGS=\"$fopts\" LDFLAGS=\"$lopts\" 2>&1 "
2425	[[ ! -f a.out ]] && compile_error=true
2426	continue # ANDERENFALLS IST STATUS=1, FALLS A.OUT VORHANDEN
2427	else
2428	[[ $localhost = lctit ]] && export LM_LICENSE_FILE=27050@tggls
2429	make -f Makefile PROG=a.out F90=$compiler_name COPT="$cpp_options" F90FLAGS="$fopts" LDFLAGS="$lopts"
2430	fi
2431
2432	if [[ $? != 0 \|\| "$compile_error" = true \|\| "$module_compile_error" = true ]]
2433	then
2434	printf "\n +++ error occured while compiling or linking"
2435	locat=compile
2436
2437	# WORKAROUND: REMOVE IF CONSTRUCT LATER, BUT KEEP THE EXIT!
2438	# if [[ $localhost != lcsgib && $localhost != lcsgih ]]
2439	# then
2440	exit
2441	# else
2442	# locat=normal
2443	# fi
2444	else
2445	printf "$striche\n *** compilation finished \n"
2446	fi
2447	fi
2448
2449
2450	# FALLS NUR TESTWEISE KOMPILIERT WERDEN SOLLTE, IST MRUN JETZT FERTIG
2451	if [[ $local_compile = true ]]
2452	then
2453	cd $HOME
2454	rm -rf $TEMPDIR
2455	locat=local_compile; exit
2456	fi
2457
2458
2459	# BEREITSTELLEN DER INPUT-DATEIEN
2460	# SCHLEIFE UEBER ALLE VOM BENUTZER ANGEGEBENEN DATEIEN
2461	(( i = 0 ))
2462	while (( i < iin ))
2463	do
2464	(( i = i + 1 ))
2465	if (( i == 1 ))
2466	then
2467	printf "\n\n *** providing INPUT-files:\n$striche"
2468	fi
2469
2470
2471	# OPTIONALE DATEIEN BEI NICHTVORHANDENSEIN UEBERGEHEN
2472	if [[ "${transin[$i]}" = unavailable ]]
2473	then
2474	if [[ "${extin[$i]}" = "" \|\| "${extin[$i]}" = " " ]]
2475	then
2476	printf "\n +++ WARNING: input file \"${pathin[$i]}/${afname}${endin[$i]}\" "
2477	printf "\n is not available!"
2478	else
2479	printf "\n +++ WARNING: input file \"${pathin[$i]}/${afname}${endin[$i]}.${extin[$i]}\" "
2480	printf "\n is not available!"
2481	fi
2482	continue
2483	fi
2484
2485	# PRUEFEN, OB EINZELDATEI ODER DATEI PRO PROZESSOR
2486	files_for_pes=false; datentyp=file
2487	if [[ "${actionin[$i]}" = pe && -n $numprocs ]]
2488	then
2489	files_for_pes=true; datentyp=directory
2490	actionin[$i]=""
2491	elif [[ "${actionin[$i]}" = pe && ! -n $numprocs ]]
2492	then
2493	actionin[$i]=""
2494	elif [[ "${actionin[$i]}" = arpe && -n $numprocs ]]
2495	then
2496	files_for_pes=true; datentyp=directory
2497	actionin[$i]="ar"
2498	elif [[ "${actionin[$i]}" = arpe && ! -n $numprocs ]]
2499	then
2500	actionin[$i]="ar"
2501	elif [[ "${actionin[$i]}" = flpe && -n $numprocs ]]
2502	then
2503	files_for_pes=true; datentyp=directory
2504	actionin[$i]="fl"
2505	elif [[ "${actionin[$i]}" = flpe && ! -n $numprocs ]]
2506	then
2507	actionin[$i]="fl"
2508	fi
2509
2510	if [[ $files_for_pes = true ]]
2511	then
2512	printf "\n >>> INPUT: ${absnamein[$i]}/.... to ${localin[$i]}"
2513	else
2514	printf "\n >>> INPUT: ${absnamein[$i]} to ${localin[$i]}"
2515	fi
2516
2517	# INPUT-DATEI FUER EINEN FORTSETZUNGSLAUF. ES WIRD GEPRUEFT,
2518	# OB DIESE DATEI NOCH AUF DEM TEMPORAEREN DATENKATALOG VORHANDEN
2519	# IST. FALLS NICHT, WIRD VERSUCHT, SIE ANSCHLIESSEND VOM ARCHIV-
2520	# SERVER ZU HOLEN
2521	if [[ "${actionin[$i]}" = fl ]]
2522	then
2523	printf "\n $datentyp will be fetched from temporary directory \"${tmp_data_catalog}\" !"
2524	if [[ $files_for_pes = false ]]
2525	then
2526	if [[ -f "$tmp_data_catalog/${frelin[$i]}" ]]
2527	then
2528	ln $tmp_data_catalog/${frelin[$i]} ${localin[$i]}
2529	got_tmp[$i]=true
2530	elif [[ -f "$WORK/${frelin[$i]}" && $ignore_archive_error = true ]]
2531	then
2532	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" !"
2533	printf "\n *** trying to use backup copy in \"$WORK\" "
2534	cp $WORK/${frelin[$i]} ${localin[$i]}
2535	else
2536	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" "
2537	printf "\n or \"$tmp_data_catalog\" does not exist!"
2538	printf "\n *** trying to get copy from archive"
2539	actionin[$i]=ar
2540	fi
2541	else
2542	if [[ -d "$tmp_data_catalog/${frelin[$i]}" ]]
2543	then
2544	mkdir ${localin[$i]}
2545	cd $tmp_data_catalog/${frelin[$i]}
2546	for file in $(ls *)
2547	do
2548	ln $file $TEMPDIR/${localin[$i]}
2549	done
2550	cd $TEMPDIR
2551	got_tmp[$i]=true
2552	elif [[ -d "$WORK/${frelin[$i]}" && $ignore_archive_error = true ]]
2553	then
2554	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" !"
2555	printf "\n *** trying to use backup copy in \"$WORK\" "
2556	cp -r $WORK/${frelin[$i]} ${localin[$i]}
2557	else
2558	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" "
2559	printf "\n or \"$tmp_data_catalog\" does not exist!"
2560	printf "\n *** trying to get copy from archive"
2561	actionin[$i]=ar
2562	fi
2563	fi
2564	fi
2565
2566
2567	# DATEI LIEGT AUF ARCHIV-SERVER
2568	if [[ "${actionin[$i]}" = ar ]]
2569	then
2570
2571	if [[ $files_for_pes = false ]]
2572	then
2573	printf "\n file will be restored from archive-system ($archive_system)!"
2574	else
2575	printf "\n directory will be restored from archive-system ($archive_system)!"
2576	fi
2577
2578	file_restored=false
2579
2580	if [[ $archive_system = asterix ]]
2581	then
2582	do_stagein=true
2583	(( stagein_anz = 0 ))
2584	while [[ $do_stagein = true ]]
2585	do
2586	if [[ $files_for_pes = false ]]
2587	then
2588	stagein -O ${frelin[$i]} > STAGEIN_OUTPUT
2589	else
2590	stagein -t -O ${frelin[$i]} > STAGEIN_OUTPUT
2591	fi
2592	cat STAGEIN_OUTPUT
2593	if [[ $(grep -c "st.msg:i24" STAGEIN_OUTPUT) != 0 ]]
2594	then
2595	file_restored=true
2596	do_stagein=false
2597	else
2598	(( stagein_anz = stagein_anz + 1 ))
2599	if (( stagein_anz == 10 ))
2600	then
2601	printf "\n +++ stagein stoped after 10 tries"
2602	locat=stage
2603	exit
2604	fi
2605	printf "\n +++ restoring from archive failed, trying again:"
2606	sleep 900
2607	fi
2608	done
2609	elif [[ $archive_system = DMF ]]
2610	then
2611	if [[ $files_for_pes = false ]]
2612	then
2613	printf "\n +++ restoring of single files impossible with $archive_system !\n"
2614	locat=DMF
2615	exit
2616	else
2617	find $ARCHIVE/${frelin[$i]} -type m -print \| dmget
2618	cp -r $ARCHIVE/${frelin[$i]} $PWD
2619	file_restored=true
2620	fi
2621	elif [[ $archive_system = tivoli ]]
2622	then
2623	if [[ $files_for_pes = false ]]
2624	then
2625	if [[ $localhost = ibmh ]]
2626	then
2627	ssh $usern@hdata.hlrn.de "cp $PERM/${frelin[$i]} $PWD"
2628	else
2629	ssh $usern@bdata.hlrn.de "cp $PERM/${frelin[$i]} $PWD"
2630	fi
2631	else
2632	(( inode = 0 ))
2633	while (( inode < nodes ))
2634	do
2635	if [[ $localhost = ibmh ]]
2636	then
2637	ssh $usern@hdata.hlrn.de "cd $PWD; tar xf $PERM/${frelin[$i]}/${frelin[$i]}.node_$inode.tar"
2638	else
2639	ssh $usern@bdata.hlrn.de "cd $PWD; tar xf $PERM/${frelin[$i]}/${frelin[$i]}.node_$inode.tar"
2640	fi
2641	(( inode = inode + 1 ))
2642	done
2643	fi
2644	file_restored=true
2645	elif [[ $archive_system = ut ]]
2646	then
2647	if [[ $files_for_pes = false ]]
2648	then
2649	cp $UT/${frelin[$i]} .
2650	else
2651	(( inode = 0 ))
2652	while (( inode < nodes ))
2653	do
2654	tar xf $UT/${frelin[$i]}/${frelin[$i]}.node_$inode.tar
2655	(( inode = inode + 1 ))
2656	done
2657	fi
2658	file_restored=true
2659	else
2660	printf "\n +++ archive_system=\"$archive_system\" restore impossible!"
2661	locat=rearchive
2662	exit
2663	fi
2664
2665	if [[ $file_restored = true ]]
2666	then
2667
2668	# DATEI AUCH AUF TEMPORAERES DATENVERZEICHNIS LEGEN, DAMIT
2669	# SIE BEI WEITEREN ZUGRIFFEN NOCH VORHANDEN IST
2670	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog; chmod g+rx $tmp_data_catalog
2671	if [[ $files_for_pes = false ]]
2672	then
2673	ln -f ${frelin[$i]} $tmp_data_catalog/${frelin[$i]}
2674	else
2675	mkdir $tmp_data_catalog/${frelin[$i]}
2676	ln -f ${frelin[$i]}/* $tmp_data_catalog/${frelin[$i]}
2677	fi
2678	got_tmp[$i]=true
2679
2680	# DATEI UNTER LOKALEM NAMEN ZUR VERFUEGUNG STELLEN
2681	mv ${frelin[$i]} ${localin[$i]}
2682
2683	fi
2684	fi
2685
2686
2687	# DATEI LIEGT IM VOM BENUTZER ANGEGEBENEN VERZEICHNIS
2688	if [[ "${actionin[$i]}" = "" \|\| "${actionin[$i]}" = "di" \|\| "${actionin[$i]}" = "npe" ]]
2689	then
2690
2691	if [[ "${actionin[$i]}" = "npe" && -n $numprocs ]]
2692	then
2693
2694	# DATEI WIRD FUER DIE PROZESSOREN EINES PARALLERECHNERS BEREITGESTELLT
2695	printf "\n file will be provided for $numprocs processors"
2696	mkdir ${localin[$i]}
2697	ival=$numprocs
2698	(( ii = 0 ))
2699	while (( ii <= ival-1 ))
2700	do
2701	if (( ii < 10 ))
2702	then
2703	cp ${absnamein[$i]} ${localin[$i]}/_000$ii
2704	elif (( ii < 100 ))
2705	then
2706	cp ${absnamein[$i]} ${localin[$i]}/_00$ii
2707	elif (( ii < 1000 ))
2708	then
2709	cp ${absnamein[$i]} ${localin[$i]}/_0$ii
2710	else
2711	cp ${absnamein[$i]} ${localin[$i]}/_$ii
2712	fi
2713	(( ii = ii + 1 ))
2714	done
2715
2716	else
2717
2718	if [[ $files_for_pes = true ]]
2719	then
2720
2721	# DIE DEN PROZESSOREN EINES PARALLELRECHNERS ZUGEHOERIGEN
2722	# DATEIEN WERDEN BEREITGESTELLT, INDEM ZUERST DER GESAMTE
2723	# KATALOGINHALT KOPIERT UND DANN DIE EINZELNEN DATEIEN
2724	# PER MOVE UMBENANNT WERDEN
2725	printf "\n providing $numprocs files for the respective processors"
2726	mkdir ${localin[$i]}
2727	if [[ $link_local_input = true ]]
2728	then
2729	printf " using ln -f\n"
2730	cd ${absnamein[$i]}
2731	for file in $(ls *)
2732	do
2733	ln -f $file ${localin[$i]}
2734	done
2735	cd $TEMPDIR
2736	fi
2737	# If "ln -f" fails of if "$link_local_input = false" do a normal "cp -r"
2738	if [[ ! -f "${localin[$i]}/_0000" ]]
2739	then
2740	if [[ $link_local_input = true ]]
2741	then
2742	printf " ln failed for .../_0000, using cp...\n"
2743	fi
2744	cp -r ${absnamein[$i]}/* ${localin[$i]}
2745	fi
2746
2747	else
2748	# BEREITSTELLUNG AUF EINPROZESSORRECHNERN
2749	if [[ $link_local_input = true ]]
2750	then
2751	printf " using ln -f\n"
2752	ln -f ${absnamein[$i]} ${localin[$i]}
2753	fi
2754	# If "ln -f" fails of if "$link_local_input = false" do a normal "cp"
2755	if [[ ! -f "${localin[$i]}" ]]
2756	then
2757	if [[ $link_local_input = true ]]
2758	then
2759	printf " ln failed, using cp...\n"
2760	fi
2761	cp ${absnamein[$i]} ${localin[$i]}
2762	fi
2763	fi
2764	fi
2765	fi
2766
2767	done
2768	if (( i != 0 ))
2769	then
2770	printf "\n$striche\n *** all INPUT-files provided \n"
2771	fi
2772
2773
2774	# EVENTUELLE INPUT-KOMMANDOS ABARBEITEN
2775	(( i = 0 ))
2776	while (( i < iic ))
2777	do
2778	(( i = i + 1 ))
2779	if (( i == 1 ))
2780	then
2781	printf "\n\n *** execution of INPUT-commands:\n$striche"
2782	fi
2783	printf "\n >>> ${in_command[$i]}"
2784	eval ${in_command[$i]}
2785	if (( i == iic ))
2786	then
2787	printf "\n$striche\n"
2788	fi
2789	done
2790
2791
2792	# VERBLEIBENDE CPU-ZEIT BERECHNEN
2793	cpurest=${cpumax}.
2794
2795
2796	# START DVR STREAMING SERVER
2797	if [[ $(echo $package_list \| grep -c dvrp_graphics) != 0 ]]
2798	then
2799	if [[ "$dvr_server" != "" ]]
2800	then
2801
2802	printf "\n\n *** preparing the dvr streaming server configuration file"
2803
2804	# Check, if a dvr server is already running
2805	running_dvrserver_id=`echo $(ps -edaf \| grep .dvrserver.config \| grep -v grep) \| cut -d" " -f2`
2806	if [[ "$running_dvrserver_id" != "" ]]
2807	then
2808
2809	printf "\n\n +++ WARNING: A dvr server with id=$running_dvrserver_id is already running!"
2810	printf "\n This server is used instead starting a new one!"
2811	printf "\n If required, script \"process_dvr_output\" has to be run manually."
2812
2813	else
2814
2815	# COPY CONFIGURATION FILE FOR STREAMING SERVER FROM REPOSITORY TO HERE
2816	if [[ -f ${PALM_BIN}/.dvrserver.config ]]
2817	then
2818	cp ${PALM_BIN}/.dvrserver.config .
2819
2820	# Entering the BASEDIR, UID and GID into this file
2821	user_id=`id -u`
2822	group_id=`id -g`
2823	# & is needed as seperator, because TEMPDIR contains /
2824	sed "s&<replace by dvr data directory>&${TEMPDIR}&g" .dvrserver.config > .dvrserver.1
2825	sed "s/<replace by user id>/$user_id/g" .dvrserver.1 > .dvrserver.2
2826	sed "s/<replace by group id>/$group_id/g" .dvrserver.2 > .dvrserver.3
2827	mv .dvrserver.3 .dvrserver.config
2828	rm .dvrserver.1 .dvrserver.2
2829
2830	# Start dvr server in background, get his id and print on terminal
2831	$dvr_server .dvrserver.config >> DVR_LOGFILE 2>&1 &
2832	dvrserver_id=`echo $(ps -edaf \| grep .dvrserver.config) \| cut -d" " -f2`
2833	printf "\n *** streaming server with id=$dvrserver_id is started in background"
2834	local_dvrserver_running=.TRUE.
2835	else
2836	printf "\n +++ missing file \".dvrserver.config\" in directory:"
2837	printf "\n \"$PALM_BIN\" "
2838	locat=dvr
2839	exit
2840	fi
2841
2842	fi
2843
2844	else
2845	printf "\n\n --- INFORMATIVE: no dvr streaming server will be started"
2846	fi
2847	fi
2848
2849
2850	# NAMELIST-DATEI MIT WERTEN VON ENVIRONMENT-VARIABLEN ERZEUGEN (ZU
2851	# LESEN VON PALM)
2852	cat > ENVPAR << %%END%%
2853	&envpar run_identifier = '$fname', host = '$localhost',
2854	write_binary = '$write_binary', tasks_per_node = $tasks_per_node,
2855	maximum_cpu_time_allowed = ${cpumax}.,
2856	revision = '$global_revision',
2857	local_dvrserver_running = $local_dvrserver_running /
2858
2859	%%END%%
2860
2861
2862	# PROGRAMMSTART
2863	printf "\n\n *** execution starts in directory\n \"`pwd`\"\n$striche\n"
2864	PATH=$PATH:$TEMPDIR
2865
2866	if [[ "$cond1" = debug \|\| "$cond2" = debug ]]
2867	then
2868	if [[ "$ENVIRONMENT" = BATCH ]]
2869	then
2870	if [[ $(echo $localhost \| cut -c1-5) != lcsgi ]]
2871	then
2872	printf "\n +++ debug is allowed in interactive mode only"
2873	locat=debug
2874	exit
2875	fi
2876	fi
2877	if [[ $localhost = decalpha ]]
2878	then
2879	dxladebug a.out
2880	elif [[ $localhost = ibmb \|\| $localhost = ibmh ]]
2881	then
2882
2883	# SETUP THE IBM MPI ENVIRONMENT
2884	export MP_SHARED_MEMORY=yes
2885	export AIXTHREADS_SCOPE=S
2886	export OMP_NUM_THREADS=$threads_per_task
2887	export AUTHSTATE=files
2888	export XLFRTEOPTS="nlwidth=132:err_recovery=no" # RECORD-LENGTH OF NAMELIST-OUTPUT
2889
2890	# FOLLOWING OPTIONS ARE MANDATORY FOR TOTALVIEW
2891	export MP_ADAPTER_USE=shared
2892	export MP_CPU_USE=multiple
2893	export MP_TIMEOUT=1200
2894
2895	unset MP_TASK_AFFINITY
2896
2897	# SO FAR, TOTALVIEW NEEDS HOSTFILE MECHANISM FOR EXECUTION
2898	#(( ii = 1 ))
2899	#while (( ii <= $numprocs ))
2900	#do
2901	# echo $localhost_realname >> hostfile
2902	# (( ii = ii + 1 ))
2903	#done
2904	#export MP_HOSTFILE=hostfile
2905
2906	if [[ "$LOADLBATCH" = yes ]]
2907	then
2908	totalview poe a.out $ROPTS
2909	else
2910	echo totalview poe -a a.out -procs $numprocs -rmpool 0 -nodes 1 $ROPTS
2911	export TVDSVRLAUNCHCMD=ssh
2912	totalview poe -a a.out -procs $numprocs -rmpool 0 -nodes 1 $ROPTS
2913	fi
2914	elif [[ $(echo $localhost \| cut -c1-5) = lcsgi ]]
2915	then
2916	# CURRENTLY NO DEBUGGER ON LCSGI
2917	if [[ $run_coupled_model = true ]]
2918	then
2919	printf "\n +++ no debug in coupled mode available on \"$localhost\" "
2920	locat=debug
2921	exit
2922	else
2923	echo "no_coupling" > runfile_atmos
2924	fi
2925	(( ii = $numprocs / $threads_per_task ))
2926	export OMP_NUM_THREADS=$threads_per_task
2927	echo "OMP_NUM_THREADS=$OMP_NUM_THREADS"
2928	if [[ $threads_per_task != 1 ]]
2929	then
2930	printf "\n threads per task: $threads_per_task"
2931	fi
2932	printf "\n\n"
2933	if [[ $( echo $mpilib \| cut -c1-3 ) = mpt ]]
2934	then
2935	# export MPI_LAUNCH_TIMEOUT=360
2936	if [[ "$totalview" = true ]]
2937	then
2938	printf "\n running totalview debugger"
2939	mpiexec_mpt -tv -n $ii ./a.out $ROPTS < runfile_atmos
2940	else
2941	mpiexec_mpt -np $ii ./a.out $ROPTS < runfile_atmos
2942	fi
2943	elif [[ $( echo $mpilib \| cut -c1-3 ) = mva ]]
2944	then
2945	# ulimit -s 300000 # A too large stack size causes problems
2946	# export MV2_NUM_PORTS=2
2947	# export MV2_CPU_MAPPING=0:1:2:3
2948	mpiexec ./a.out $ROPTS < runfile_atmos
2949	fi
2950	else
2951	printf "\n +++ no debug available on \"$localhost\" "
2952	printf "\n or not implemented in mrun so far"
2953	locat=debug
2954	exit
2955	fi
2956	else
2957	if [[ -n $numprocs ]]
2958	then
2959	# RUNNING THE PROGRAM ON PARALLEL MACHINES
2960	if [[ $(echo $host \| cut -c1-3) = ibm ]]
2961	then
2962	# SETUP THE IBM MPI ENVIRONMENT
2963	if [[ $host != ibmh ]]
2964	then
2965	export MP_SHARED_MEMORY=yes
2966	export AIXTHREAD_SCOPE=S
2967	export OMP_NUM_THREADS=$threads_per_task
2968	export XLSMPOPTS="spins=0:yields=0:stack=20000000"
2969	export AUTHSTATE=files
2970	export XLFRTEOPTS="nlwidth=132:err_recovery=no" # RECORD-LENGTH OF NAMELIST-OUTPUT
2971	# export MP_PRINTENV=yes
2972
2973	# TUNING-VARIABLEN ZUR VERBESSERUNG DER KOMMUNIKATION
2974	# ZEIGEN ABER DERZEIT (SEP 04, FEDERATION) KAUM WIRKUNG
2975	export MP_WAIT_MODE=poll
2976	[[ $node_usage = not_shared ]] && export MP_SINGLE_THREAD=yes
2977	fi
2978	if [[ "$LOADLBATCH" = yes ]]
2979	then
2980	printf "\n--- Control: OMP_NUM_THREADS = \"$OMP_NUM_THREADS\" \n"
2981	if [[ "$cond1" = hpmcount \|\| "$cond2" = hpmcount ]]
2982	then
2983	/opt/optibm/HPM_2_4_1/bin/hpmcount a.out $ROPTS
2984	else
2985	if [[ $run_coupled_model = false ]]
2986	then
2987	if [[ "$ocean_file_appendix" = true ]]
2988	then
2989	echo "precursor_ocean" > runfile_atmos
2990	else
2991	echo "precursor_atmos" > runfile_atmos
2992	fi
2993	else
2994	(( iia = $numprocs_atmos / $threads_per_task ))
2995	(( iio = $numprocs_ocean / $threads_per_task ))
2996	printf "\n coupled run ($iia atmosphere, $iio ocean)"
2997	printf "\n using $coupled_mode coupling"
2998	printf "\n\n"
2999	echo "coupled_run $iia $iio" > runfile_atmos
3000	fi
3001	poe ./a.out $ROPTS < runfile_atmos
3002	fi
3003	else
3004	if [[ $localhost = ibmb \|\| $localhost = ibmh \|\| $localhost = ibms ]]
3005	then
3006	poe a.out -procs $numprocs -nodes 1 -rmpool 0 $ROPTS
3007	elif [[ $localhost = ibmy ]]
3008	then
3009	if [[ -f $hostfile ]]
3010	then
3011	cp $hostfile hostfile
3012	else
3013	(( ii = 1 ))
3014	while (( ii <= $numprocs ))
3015	do
3016	echo $localhost_realname >> hostfile
3017	(( ii = ii + 1 ))
3018	done
3019	fi
3020	export MP_HOSTFILE=hostfile
3021	if [[ $run_coupled_model = false ]]
3022	then
3023	if [[ "$ocean_file_appendix" = true ]]
3024	then
3025	echo "precursor_ocean" > runfile_atmos
3026	else
3027	echo "precursor_atmos" > runfile_atmos
3028	fi
3029	else
3030	(( iia = $numprocs_atmos / $threads_per_task ))
3031	(( iio = $numprocs_ocean / $threads_per_task ))
3032	printf "\n coupled run ($iia atmosphere, $iio ocean)"
3033	printf "\n using $coupled_mode coupling"
3034	printf "\n\n"
3035	echo "coupled_run $iia $iio" > runfile_atmos
3036	fi
3037	./a.out -procs $tasks_per_node $ROPTS < runfile_atmos
3038
3039	else
3040	if [[ "$host_file" = "" ]]
3041	then
3042	printf "\n +++ no hostfile given in configuration file"
3043	locat=config_file
3044	exit
3045	else
3046	eval host_file=$host_file
3047	fi
3048	export MP_HOSTFILE=$host_file
3049	poe a.out -procs $numprocs -tasks_per_node $numprocs $ROPTS
3050	fi
3051	fi
3052	elif [[ $host = nech \|\| $host = necriam ]]
3053	then
3054	(( ii = nodes ))
3055	if [[ $ii = 1 ]]
3056	then
3057	export F_ERRCNT=0 # acceptable number of errors before program is stopped
3058	export MPIPROGINF=YES
3059	# export F_TRACE=YES\|FMT1\|FMT2 # output of ftrace informations to job protocol
3060	echo "*** execution on single node with mpirun"
3061	mpirun -np $numprocs ./a.out $ROPTS
3062	else
3063	(( i = 0 ))
3064	while (( i < ii ))
3065	do
3066	echo "-h $i -p $tasks_per_node -e ./mpi_exec_shell" >> multinode_config
3067	(( i = i + 1 ))
3068	done
3069
3070	echo "#!/bin/sh" > mpi_exec_shell
3071	echo " " >> mpi_exec_shell
3072	echo "set -u" >> mpi_exec_shell
3073	echo "F_ERRCNT=0" >> mpi_exec_shell
3074	echo "MPIPROGINV=YES" >> mpi_exec_shell
3075	echo "OMP_NUM_THREADS=$threads_per_task" >> mpi_exec_shell
3076	echo "cpurest=$cpurest" >> mpi_exec_shell
3077	echo "fname=$fname" >> mpi_exec_shell
3078	echo "localhost=$localhost" >> mpi_exec_shell
3079	echo "return_addres=$return_addres" >> mpi_exec_shell
3080	echo "return_username=$return_username" >> mpi_exec_shell
3081	echo "tasks_per_node=$tasks_per_node" >> mpi_exec_shell
3082	echo "write_binary=$write_binary" >> mpi_exec_shell
3083	echo "use_seperate_pe_for_dvrp_output=$use_seperate_pe_for_dvrp_output" >> mpi_exec_shell
3084	echo " " >> mpi_exec_shell
3085	echo "export F_ERRCNT" >> mpi_exec_shell
3086	echo "export MPIPROGINV" >> mpi_exec_shell
3087	echo "export OMP_NUM_THREADS" >> mpi_exec_shell
3088	echo "export cpurest" >> mpi_exec_shell
3089	echo "export fname" >> mpi_exec_shell
3090	echo "export localhost" >> mpi_exec_shell
3091	echo "export return_addres" >> mpi_exec_shell
3092	echo "export return_username" >> mpi_exec_shell
3093	echo "export tasks_per_node" >> mpi_exec_shell
3094	echo "export write_binary" >> mpi_exec_shell
3095	echo "export use_seperate_pe_for_dvrp_output" >> mpi_exec_shell
3096	echo " " >> mpi_exec_shell
3097	echo "exec ./a.out" >> mpi_exec_shell
3098
3099	chmod u+x mpi_exec_shell
3100	export MPIPROGINF=YES
3101	mpirun -f multinode_config &
3102	wait
3103
3104	fi
3105	elif [[ $(echo $host \| cut -c1-2) = lc && $host != lctit ]]
3106	then
3107
3108	# COPY HOSTFILE FROM SOURCE DIRECTORY OR CREATE IT, IF IT
3109	# DOES NOT EXIST
3110	if [[ $host != lcsgih && $host != lcsgib ]]
3111	then
3112	if [[ -f $hostfile ]]
3113	then
3114	cp $hostfile hostfile
3115	else
3116	(( ii = 1 ))
3117	while (( ii <= $numprocs / $threads_per_task ))
3118	do
3119	echo $localhost_realname >> hostfile
3120	(( ii = ii + 1 ))
3121	done
3122	fi
3123	eval zeile=\"`head -n $ii hostfile`\"
3124	printf "\n *** running on: $zeile"
3125	fi
3126
3127	(( ii = $numprocs / $threads_per_task ))
3128	export OMP_NUM_THREADS=$threads_per_task
3129	# echo "OMP_NUM_THREADS=$OMP_NUM_THREADS"
3130	if [[ $threads_per_task != 1 ]]
3131	then
3132	printf "\n threads per task: $threads_per_task"
3133	fi
3134	if [[ $run_coupled_model = false ]]
3135	then
3136	if [[ "$ocean_file_appendix" = true ]]
3137	then
3138	echo "precursor_ocean" > runfile_atmos
3139	else
3140	echo "precursor_atmos" > runfile_atmos
3141	fi
3142	printf "\n\n"
3143	if [[ $host = lcsgih \|\| $host = lcsgib ]]
3144	then
3145	if [[ $( echo $mpilib \| cut -c1-3 ) = mpt ]]
3146	then
3147	# export MPI_LAUNCH_TIMEOUT=360
3148	mpiexec_mpt -np $ii ./a.out $ROPTS < runfile_atmos
3149	elif [[ $( echo $mpilib \| cut -c1-3 ) = mva ]]
3150	then
3151	# ulimit -s 300000 # A too large stack size causes problems
3152	# export MV2_NUM_PORTS=2
3153	# export MV2_CPU_MAPPING=0:1:2:3
3154	mpiexec -np $ii ./a.out $ROPTS < runfile_atmos
3155	fi
3156	elif [[ $host = lcxt4 ]]
3157	then
3158	aprun -n $ii -N $tasks_per_node a.out $ROPTS < runfile_atmos
3159	else
3160	mpiexec -machinefile hostfile -n $ii a.out < runfile_atmos $ROPTS
3161	fi
3162	else
3163
3164	# currently there is no full MPI-2 support on ICE and XT4
3165	(( iia = $numprocs_atmos / $threads_per_task ))
3166	(( iio = $numprocs_ocean / $threads_per_task ))
3167	printf "\n coupled run ($iia atmosphere, $iio ocean)"
3168	printf "\n using $coupled_mode coupling"
3169	printf "\n\n"
3170
3171	if [[ $coupled_mode = "mpi2" ]]
3172	then
3173	echo "atmosphere_to_ocean $iia $iio" > runfile_atmos
3174	echo "ocean_to_atmosphere $iia $iio" > runfile_ocean
3175	if [[ $host = lcsgih \|\| $host = lcsgib ]]
3176	then
3177
3178	if [[ $( echo $mpilib \| cut -c1-3 ) = mpt ]]
3179	then
3180	# export MPI_LAUNCH_TIMEOUT=360
3181	mpiexec_mpt -np $iia ./a.out $ROPTS < runfile_atmos &
3182	mpiexec_mpt -np $iio ./a.out $ROPTS < runfile_ocean &
3183	elif [[ $( echo $mpilib \| cut -c1-3 ) = mva ]]
3184	then
3185	# ulimit -s 300000 # A too large stack size causes problems
3186	# export MV2_NUM_PORTS=2
3187	# export MV2_CPU_MAPPING=0:1:2:3
3188	mpiexec -n $iia ./a.out $ROPTS < runfile_atmos &
3189	mpiexec -n $iio ./a.out $ROPTS < runfile_ocean &
3190	fi
3191
3192	elif [[ $host = lcxt4 ]]
3193	then
3194
3195	aprun -n $iia -N $tasks_per_node a.out < runfile_atmos $ROPTS &
3196	aprun -n $iio -N $tasks_per_node a.out < runfile_ocean $ROPTS &
3197
3198	else
3199	# WORKAROUND BECAUSE mpiexec WITH -env option IS NOT AVAILABLE ON SOME SYSTEMS
3200	mpiexec -machinefile hostfile -n $iia a.out $ROPTS < runfile_atmos &
3201	mpiexec -machinefile hostfile -n $iio a.out $ROPTS < runfile_ocean &
3202	# mpiexec -machinefile hostfile -n $iia -env coupling_mode atmosphere_to_ocean a.out $ROPTS &
3203	# mpiexec -machinefile hostfile -n $iio -env coupling_mode ocean_to_atmosphere a.out $ROPTS &
3204	fi
3205	wait
3206
3207	else
3208
3209	echo "coupled_run $iia $iio" > runfile_atmos
3210	if [[ $host = lcsgih \|\| $host = lcsgib ]]
3211	then
3212
3213	if [[ $( echo $mpilib \| cut -c1-3 ) = mpt ]]
3214	then
3215	# export MPI_LAUNCH_TIMEOUT=360
3216	mpiexec_mpt -np $ii ./a.out $ROPTS < runfile_atmos
3217	elif [[ $( echo $mpilib \| cut -c1-3 ) = mva ]]
3218	then
3219	# ulimit -s 300000 # A too large stack size causes problems
3220	# export MV2_NUM_PORTS=2
3221	# export MV2_CPU_MAPPING=0:1:2:3
3222	mpiexec ./a.out $ROPTS < runfile_atmos
3223	fi
3224
3225	elif [[ $host = lcxt4 ]]
3226	then
3227
3228	aprun -n $ii -N $tasks_per_node a.out < runfile_atmos $ROPTS
3229
3230	fi
3231	wait
3232	fi
3233
3234	# if [[ $scirocco = true ]]
3235	# then
3236	# mpiexec -machinefile hostfile -n $ii a.out $ROPTS
3237	# else
3238	# mpirun -machinefile hostfile -np $ii a.out $ROPTS
3239	# fi
3240	fi
3241	elif [[ $host = decalpha ]]
3242	then
3243	dmpirun -np $numprocs a.out $ROPTS
3244	elif [[ $host = lctit ]]
3245	then
3246	export runfile=runfile.$kennung
3247
3248	echo "cd $PWD" > $runfile
3249	echo "export OMP_NUM_THREADS=$OMP_NUM_THREADS" >> $runfile
3250	echo "export cpurest=$cpurest" >> $runfile
3251	echo "export fname=$fname" >> $runfile
3252	echo "export localhost=$localhost" >> $runfile
3253	echo "export return_addres=$return_addres" >> $runfile
3254	echo "export return_username=$return_username" >> $runfile
3255	echo "export tasks_per_node=$tasks_per_node" >> $runfile
3256	echo "export write_binary=$write_binary" >> $runfile
3257	echo "export use_seperate_pe_for_dvrp_output=$use_seperate_pe_for_dvrp_output" >> $runfile
3258	echo "./a.out" >> $runfile
3259	chmod u+x $runfile
3260
3261	if [[ "$QUEUE" = interactive ]]
3262	then
3263	mpirun -np $numprocs a.out $ROPTS
3264	else
3265	(( mem_tsubame = $memory / 1024.0 ))
3266	echo "Memory for Tsubame for each process in GB:", $mem_tsubame
3267	# n1ge -fore -g 1S060156 -mpi $numprocs -mem 4 -N palm -q $queue a.out $ROPTS
3268	# /n1ge/TITECH_GRID/tools/bin/n1ge -fore -g $group_number -mpi ${numprocs}:$tasks_per_node -mem $mem_tsubame -N palm -rt $minuten -q $queue a.out $ROPTS
3269	n1ge -fore -g $group_number -mpi ${numprocs}:$tasks_per_node -mem $mem_tsubame -N palm -rt $minuten -q $queue a.out $ROPTS
3270	fi
3271
3272	rm $runfile
3273	else
3274	mpprun -n $numprocs a.out $ROPTS
3275	fi
3276	[[ $? != 0 ]] && execution_error=true
3277
3278
3279	# PERFORMANCE-AUSWERTUNG MIT APPRENTICE
3280	if [[ "$cond1" = apprentice \|\| "$cond2" = apprentice ]]
3281	then
3282	apprentice
3283	fi
3284	else
3285	a.out $ROPTS
3286	fi
3287	fi
3288	if [[ $? != 0 \|\| $execution_error = true ]]
3289	then
3290
3291	# ABBRUCH BEI LAUFZEITFEHLER
3292	# [[ ! ( "$cond1" = debug \|\| "$cond2" = debug ) ]] && cat aout_output*
3293	printf "\n +++ runtime error occured"
3294	locat=execution
3295	exit
3296	else
3297	# [[ ! ( "$cond1" = debug \|\| "$cond2" = debug ) ]] && cat aout_output*
3298	printf "\n$striche\n *** execution finished \n"
3299
3300	# Stop the dvr streaming server and process the dvr output in order
3301	# to create dvrs- and html-files containing all streams
3302	if [[ "$dvrserver_id" != "" ]]
3303	then
3304	kill $dvrserver_id
3305	printf "\n *** dvr server with id=$dvrserver_id has been stopped"
3306
3307	# If there is a directory, data have been output by the
3308	# streaming server. Otherwise, user has chosen dvrp_output=local
3309	if [[ -d DATA_DVR ]]
3310	then
3311
3312	# Add the current dvr configuration file to the dvr output
3313	# directory
3314	cp .dvrserver.config DATA_DVR
3315
3316	# Process the dvr output (option -s for also generating
3317	# sequence mode data)
3318	process_dvr_output -d DATA_DVR -f $fname -s
3319
3320	else
3321
3322	# Process the local output
3323	process_dvr_output -l -d DATA_DVR -f $fname
3324
3325	fi
3326
3327	elif [[ $(echo $package_list \| grep -c dvrp_graphics) != 0 ]]
3328	then
3329
3330	# Process dvr output generated in local mode (dvrp_output=local)
3331	process_dvr_output -l -d DATA_DVR -f $fname
3332
3333	fi
3334	fi
3335
3336
3337
3338	# EVENTUELLE OUTPUT-KOMMANDOS ABARBEITEN
3339	(( i = 0 ))
3340	while (( i < ioc ))
3341	do
3342	(( i = i + 1 ))
3343	if (( i == 1 ))
3344	then
3345	printf "\n\n *** execution of OUTPUT-commands:\n$striche"
3346	fi
3347	printf "\n >>> ${out_command[$i]}"
3348	eval ${out_command[$i]}
3349	if (( i == ioc ))
3350	then
3351	printf "\n$striche\n"
3352	fi
3353	done
3354
3355
3356	# EVTL. INHALT DES AKTUELLEN VERZEICHNISSES AUSGEBEN
3357	if [[ $do_trace = true ]]
3358	then
3359	printf "\n\n"
3360	ls -al
3361	fi
3362
3363
3364
3365	# OUTPUT-DATEIEN AN IHRE ZIELORTE KOPIEREN
3366	(( i = 0 ))
3367	while (( i < iout ))
3368	do
3369	(( i = i + 1 ))
3370	if (( i == 1 ))
3371	then
3372	printf "\n\n *** saving OUTPUT-files:\n$striche"
3373	fi
3374
3375	# PRUEFEN, OB EINZELDATEI ODER DATEI PRO PROZESSOR
3376	files_for_pes=false; filetyp=file
3377	if [[ "${actionout[$i]}" = pe && -n $numprocs ]]
3378	then
3379	files_for_pes=true; filetyp=directory
3380	actionout[$i]=""
3381	elif [[ "${actionout[$i]}" = pe && ! -n $numprocs ]]
3382	then
3383	actionout[$i]=""
3384	elif [[ "${actionout[$i]}" = arpe && -n $numprocs ]]
3385	then
3386	files_for_pes=true; filetyp=directory
3387	actionout[$i]="ar"
3388	elif [[ "${actionout[$i]}" = arpe && ! -n $numprocs ]]
3389	then
3390	actionout[$i]="ar"
3391	elif [[ "${actionout[$i]}" = flpe && -n $numprocs ]]
3392	then
3393	files_for_pes=true; filetyp=directory
3394	actionout[$i]="fl"
3395	elif [[ "${actionout[$i]}" = flpe && ! -n $numprocs ]]
3396	then
3397	actionout[$i]="fl"
3398	elif [[ "${actionout[$i]}" = trpe && -n $numprocs ]]
3399	then
3400	files_for_pes=true; filetyp=directory
3401	actionout[$i]="tr"
3402	elif [[ "${actionout[$i]}" = trpe && ! -n $numprocs ]]
3403	then
3404	actionout[$i]="tr"
3405	fi
3406
3407	if [[ ! -f ${localout[$i]} && $files_for_pes = false ]]
3408	then
3409	printf "\n +++ temporary OUTPUT-file ${localout[$i]} does not exist\n"
3410	elif [[ ! -d ${localout[$i]} && $files_for_pes = true ]]
3411	then
3412	printf "\n +++ temporary OUTPUT-file ${localout[$i]}/.... does not exist\n"
3413	else
3414
3415
3416	# KOPIEREN PER FTP/SCP (IMMER IM BINAERMODUS, -M: FALLS ZIELKATALOG
3417	# NICHT VORHANDEN, WIRD VERSUCHT, IHN ANZULEGEN), ABER NUR BEI
3418	# REMOTE-RECHNUNGEN
3419	if [[ "${actionout[$i]}" = tr ]]
3420	then
3421	if [[ $localhost != $fromhost ]]
3422	then
3423	if [[ $files_for_pes = false ]]
3424	then
3425	cps=""
3426	cst=""
3427	else
3428	cps=-c
3429	cst="/"
3430	fi
3431	if [[ $localhost = ibmb \|\| $localhost = nech ]]
3432	then
3433
3434	# TRANSFER IN EIGENSTAENDIGEM JOB
3435	# ZUERST KOPIE DER DATEI INS TEMPORAERE DATENVERZEICHNIS
3436	[[ ! -d $tmp_data_catalog/TRANSFER ]] && mkdir -p $tmp_data_catalog/TRANSFER
3437	file_to_transfer=${fname}_${localout[$i]}_to_transfer_$kennung
3438	if [[ $files_for_pes = false ]]
3439	then
3440	ln -f ${localout[$i]} $tmp_data_catalog/TRANSFER/$file_to_transfer
3441	else
3442	mkdir $tmp_data_catalog/TRANSFER/$file_to_transfer
3443	ln ${localout[$i]}/* $tmp_data_catalog/TRANSFER/$file_to_transfer
3444	fi
3445
3446	echo "set -x" > transfer_${localout[$i]}
3447	echo "cd $tmp_data_catalog/TRANSFER" >> transfer_${localout[$i]}
3448
3449	printf "\n >>> OUTPUT: ${localout[$i]}$cst by SCP in seperate job to"
3450	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}$cst"
3451	printf "\n or higher cycle\n"
3452	echo "batch_scp $cps -b -m -u $return_username $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
3453
3454	echo "[[ \$? = 0 ]] && rm $file_to_transfer" >> transfer_${localout[$i]}
3455
3456	if [[ $localhost = nech ]]
3457	then
3458	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 900 transfer_${localout[$i]}
3459	else
3460	if [[ "$LOGNAME" = b323013 ]]
3461	then
3462	subjob -v -q c1 -X 0 -m 1000 -t 900 -c $job_catalog transfer_${localout[$i]}
3463	else
3464	subjob -d -v -q c1 -X 0 -m 1000 -t 900 -c $job_catalog transfer_${localout[$i]}
3465	fi
3466	fi
3467
3468	else
3469
3470	# TRANSFER INNERHALB DIESES JOBS
3471	transfer_failed=false
3472	printf "\n >>> OUTPUT: ${localout[$i]}$cst by SCP to"
3473	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}$cst\n"
3474	batch_scp $cps -b -m -u $return_username $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
3475	[[ $? != 0 ]] && transfer_failed=true
3476
3477	# BEI FEHLGESCHLAGENEM TRANSFER SICHERUNGSKOPIE AUF
3478	# LOKALER MASCHINE ANLEGEN
3479	if [[ $transfer_failed = true ]]
3480	then
3481	printf " +++ transfer failed. Trying to save a copy on the local host under:\n"
3482	printf " ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung\n"
3483
3484	# ERSTMAL PRUEFEN, OB VERZEICHNIS EXISTIERT. GEGEBENENFALLS
3485	# ANLEGEN.
3486	eval local_catalog=${pathout[$i]}
3487	if [[ ! -d $local_catalog ]]
3488	then
3489	printf " *** local directory does not exist. Trying to create:\n"
3490	printf " $local_catalog \n"
3491	mkdir -p $local_catalog
3492	fi
3493	eval cp ${localout[$i]} ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung
3494	transfer_problems=true
3495	fi
3496	fi
3497	else
3498
3499	# WERTZUWEISUNG, SO DASS WEITER UNTEN NUR KOPIERT WIRD
3500	actionout[$i]=""
3501	fi
3502	fi
3503
3504
3505	# APPEND PER FTP/SCP (IMMER IM BINAERMODUS, -M: FALLS ZIELKATALOG
3506	# NICHT VORHANDEN, WIRD VERSUCHT, IHN ANZULEGEN), ABER NUR BEI
3507	# REMOTE-RECHNUNGEN
3508	if [[ "${actionout[$i]}" = tra ]]
3509	then
3510	if [[ $localhost != $fromhost ]]
3511	then
3512	if [[ $localhost = ibmh \|\| $localhost = ibmb \|\| $localhost = nech ]]
3513	then
3514
3515	# TRANSFER IN EIGENSTAENDIGEM JOB
3516	# ZUERST KOPIE DER DATEI INS TEMPORAERE DATENVERZEICHNIS
3517	[[ ! -d $tmp_data_catalog/TRANSFER ]] && mkdir -p $tmp_data_catalog/TRANSFER
3518	file_to_transfer=${fname}_${localout[$i]}_to_transfer_$kennung
3519	ln -f ${localout[$i]} $tmp_data_catalog/TRANSFER/$file_to_transfer
3520
3521	echo "set -x" > transfer_${localout[$i]}
3522	echo "cd $tmp_data_catalog/TRANSFER" >> transfer_${localout[$i]}
3523
3524	printf "\n >>> OUTPUT: ${localout[$i]} append by SCP in seperate job to"
3525	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}"
3526	printf "\n or higher cycle\n"
3527	echo "batch_scp -A -b -m -u $return_username $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
3528
3529	echo "[[ \$? = 0 ]] && rm $file_to_transfer" >> transfer_${localout[$i]}
3530
3531	if [[ $localhost = nech ]]
3532	then
3533	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 900 transfer_${localout[$i]}
3534	else
3535	if [[ $LOGNAME = b323013 ]]
3536	then
3537	subjob -v -q c1 -X 0 -m 1000 -t 900 -c $job_catalog transfer_${localout[$i]}
3538	else
3539	subjob -d -v -q c1 -X 0 -m 1000 -t 900 -c $job_catalog transfer_${localout[$i]}
3540	fi
3541	fi
3542
3543	else
3544
3545	# TRANSFER INNERHALB DIESES JOBS
3546	transfer_failed=false
3547	printf "\n >>> OUTPUT: ${localout[$i]} append by SCP to"
3548	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}\n"
3549	batch_scp -A -b -m -u $return_username $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
3550	[[ $? != 0 ]] && transfer_failed=true
3551
3552	# BEI FEHLGESCHLAGENEM TRANSFER SICHERUNGSKOPIE AUF
3553	# LOKALER MASCHINE ANLEGEN
3554	if [[ $transfer_failed = true ]]
3555	then
3556	printf " +++ transfer failed. Trying to save a copy on the local host under:\n"
3557	printf " ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung\n"
3558
3559	# ERSTMAL PRUEFEN, OB VERZEICHNIS EXISTIERT. GEGEBENENFALLS
3560	# ANLEGEN
3561	eval local_catalog=${pathout[$i]}
3562	if [[ ! -d $local_catalog ]]
3563	then
3564	printf " *** local directory does not exist. Trying to create:\n"
3565	printf " $local_catalog \n"
3566	mkdir -p $local_catalog
3567	fi
3568
3569	eval cp ${localout[$i]} ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung
3570	transfer_problems=true
3571	fi
3572	fi
3573	else
3574
3575	# WERTZUWEISUNG, SO DASS WEITER UNTEN NUR APPEND AUF
3576	# LOKALER MASCHINE DURCHGEFUEHRT WIRD
3577	actionout[$i]=a
3578	fi
3579	fi
3580
3581
3582	# OUTPUT-DATEI FUER EINEN FORTSETZUNGSLAUF. DATEI WIRD PER
3583	# LINK AUF DEN TEMPORAEREN DATENKATALOG GELEGT. OPTION -f WIRD
3584	# VERWENDET, FALLS DORT NOCH EINE DATEI GLEICHEN NAMENS VORHANDEN
3585	# SEIN SOLLTE. ANSCHLIESSEND WIRD SEINE ARCHIVIERUNG ANGESTOSSEN
3586	if [[ "${actionout[$i]}" = fl ]]
3587	then
3588	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
3589	chmod g+rx $tmp_data_catalog
3590	if [[ $files_for_pes = false ]]
3591	then
3592	printf "\n >>> OUTPUT: ${localout[$i]} to"
3593	printf "\n $tmp_data_catalog/${frelout[$i]} (temporary data catalog)\n"
3594	ln -f ${localout[$i]} $tmp_data_catalog/${frelout[$i]}
3595	else
3596	printf "\n >>> OUTPUT: ${localout[$i]}/.... to"
3597	printf "\n $tmp_data_catalog/${frelout[$i]} (temporary data catalog)\n"
3598	mkdir $tmp_data_catalog/${frelout[$i]}
3599	cd ${localout[$i]}
3600	for file in $(ls *)
3601	do
3602	ln -f $file $tmp_data_catalog/${frelout[$i]}
3603	done
3604	cd $TEMPDIR
3605	fi
3606
3607
3608	# ARCHIVIERUNGSJOB WIRD ERZEUGT UND ABGESCHICKT
3609	if [[ $store_on_archive_system = true ]]
3610	then
3611
3612	if [[ $archive_system = asterix ]]
3613	then
3614	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3615	if [[ $files_for_pes = false ]]
3616	then
3617	echo "stageout ${frelout[$i]} > STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3618	else
3619	echo "stageout -t ${frelout[$i]} > STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3620	fi
3621	echo "cat STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3622	echo "if [[ \$(grep -c \"st.msg:150\" STAGE_OUTPUT${i}_$kennung) != 0 ]]" >> archive_${frelout[$i]}
3623	echo "then" >> archive_${frelout[$i]}
3624	echo " do_stageout=false" >> archive_${frelout[$i]}
3625	echo "else" >> archive_${frelout[$i]}
3626	echo " echo \" +++ $filetyp ${frelout[$i]} could not be stored on archive-system\" " >> archive_${frelout[$i]}
3627	echo " cat /dev/null > ~/job_queue/ARCHIVE_ERROR_$fname" >> archive_${frelout[$i]}
3628	echo " cat STAGE_OUTPUT${i}_$kennung > ~/job_queue/archive_${frelout[$i]}_error" >> archive_${frelout[$i]}
3629	echo " echo \" *** $filetyp ${frelout[$i]} will be copied to \$WORK as backup\" " >> archive_${frelout[$i]}
3630	if [[ $files_for_pes = false ]]
3631	then
3632	echo " cp ${frelout[$i]} \$WORK" >> archive_${frelout[$i]}
3633	else
3634	echo " cp -r ${frelout[$i]} \$WORK/${frelout[$i]}" >> archive_${frelout[$i]}
3635	fi
3636	echo " echo \" *** $filetyp ${frelout[$i]} saved\" " >> archive_${frelout[$i]}
3637	echo "fi" >> archive_${frelout[$i]}
3638	echo "rm STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3639	elif [[ $archive_system = DMF ]]
3640	then
3641	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3642	if [[ $files_for_pes = false ]]
3643	then
3644	printf "\n +++ archiving of single files impossible with $archive_system !\n"
3645	locat=DMF
3646	exit
3647	else
3648	# FUER RECHNER IN JUELICH. DORT KOENNTEN AUCH
3649	# EINZELNE DATEIEN GESICHERT WERDEN (SPAETER KORR.)
3650	echo "rm -rf \$ARCHIVE/${frelout[$i]}" >> archive_${frelout[$i]}
3651	echo "cp -r ${frelout[$i]} \$ARCHIVE" >> archive_${frelout[$i]}
3652	fi
3653	elif [[ $archive_system = tivoli ]]
3654	then
3655	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3656	if [[ $files_for_pes = false ]]
3657	then
3658	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3659	echo "set -x" >> archive_${frelout[$i]}
3660	echo "rm -rf \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3661	echo "cp ${frelout[$i]} \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3662	else
3663
3664	echo "set -x" >> archive_${frelout[$i]}
3665	echo "rm -rf \$PERM/${frelout[$i]}/*" >> archive_${frelout[$i]}
3666	echo "[[ ! -d \$PERM/${frelout[$i]} ]] && mkdir $PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3667	cd $tmp_data_catalog
3668	all_files=`ls -1 ${frelout[$i]}/*`
3669	cd - > /dev/null
3670	(( inode = 0 ))
3671	(( tp1 = tasks_per_node + 1 ))
3672	while (( inode < nodes ))
3673	do
3674	# echo "*** all_files = \"$all_files\" "
3675	files=`echo $all_files \| cut -d" " -f1-$tasks_per_node`
3676	all_files=`echo $all_files \| cut -d" " -f$tp1-`
3677	# echo "*** tasks_per_node = \"$tasks_per_node\" "
3678	# echo "*** files = \"$files\" "
3679	# echo "*** all_files = \"$all_files\" "
3680	echo "tar cvf \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar $files" >> archive_${frelout[$i]}
3681	echo "dsmc incremental \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar" >> archive_${frelout[$i]}
3682	echo "dsmmigrate \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar" >> archive_${frelout[$i]}
3683	(( inode = inode + 1 ))
3684	done
3685	# echo "rm -rf \$PERM/${frelout[$i]}.tar" >> archive_${frelout[$i]}
3686	# echo "tar cvf \$PERM/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
3687	fi
3688	elif [[ $archive_system = ut ]]
3689	then
3690	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3691	if [[ $files_for_pes = false ]]
3692	then
3693	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3694	echo "set -x" >> archive_${frelout[$i]}
3695	echo "rm -rf \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3696	echo "cp ${frelout[$i]} \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3697	else
3698
3699	echo "set -x" >> archive_${frelout[$i]}
3700	echo "rm -rf \$UT/${frelout[$i]}/*" >> archive_${frelout[$i]}
3701	echo "[[ ! -d \$UT/${frelout[$i]} ]] && mkdir $UT/${frelout[$i]}" >> archive_${frelout[$i]}
3702	cd $tmp_data_catalog
3703	all_files=`ls -1 ${frelout[$i]}/*`
3704	cd - > /dev/null
3705	(( inode = 0 ))
3706	(( tp1 = tasks_per_node + 1 ))
3707	while (( inode < nodes ))
3708	do
3709	files=`echo $all_files \| cut -d" " -f1-$tasks_per_node`
3710	all_files=`echo $all_files \| cut -d" " -f$tp1-`
3711	echo "tar cvf \$UT/${frelout[$i]}/${frelout[$i]}.node_$inode.tar $files" >> archive_${frelout[$i]}
3712	(( inode = inode + 1 ))
3713	done
3714	fi
3715	elif [[ $archive_system = none ]]
3716	then
3717	printf " +++ archiving on $localhost not available!\n"
3718	fi
3719
3720	if [[ $archive_system != none ]]
3721	then
3722	if [[ $localhost = ibmh \|\| $localhost = ibmb ]]
3723	then
3724	# subjob -d -v -q cdata -X 0 -m 1000 -t 43200 -c $job_catalog archive_${frelout[$i]}
3725	subjob -v -q cdata -X 0 -m 1000 -t 43200 -c $job_catalog archive_${frelout[$i]}
3726	elif [[ $localhost = nech ]]
3727	then
3728	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 7200 archive_${frelout[$i]}
3729	fi
3730	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
3731	fi
3732	else
3733	printf " +++ caution: option -A is switched on. No archiving on $archive_system!\n"
3734	fi
3735
3736
3737	# LEERDATEI IM BENUTZERVERZEICHNIS ANLEGEN, DAMIT BEKANNT IST,
3738	# WIE DIE HOECHSTE ZYKLUSNUMMER AUF DEM ARCHIV-SYSTEM LAUTET
3739	if [[ $files_for_pes = false ]]
3740	then
3741	cat /dev/null > ${pathout[$i]}
3742	else
3743	mkdir -p ${pathout[$i]}
3744	fi
3745
3746	fi
3747
3748
3749	# KOPIEREN AUF LOKALER MASCHINE ZUM ARCHIV-SYSTEM
3750	# AUSSERDEM MUSS LEERDATEI ANGELEGT WERDEN, DAMIT BEKANNT IST,
3751	# WIE DIE HOECHSTE ZYKLUSNUMMER AUF DEM ARCHIV-SYSTEM LAUTET
3752	# FALLS IRGENDEINE (VON MEHREREN) ARCHIVIERUNGEN SCHIEF GEHT,
3753	# WIRD FLAG GESETZT UND BLEIBT AUCH BEI WEITEREN ORDNUNGS-
3754	# GEMAESSEN ARCHIVIERUNGEN GESETZT
3755	if [[ "${actionout[$i]}" = ar ]]
3756	then
3757	if [[ $files_for_pes = false ]]
3758	then
3759	printf "\n >>> OUTPUT: ${localout[$i]} to"
3760	printf "\n ${pathout[$i]}"
3761	printf "\n File will be copied to archive-system ($archive_system) !\n"
3762	else
3763	printf "\n >>> OUTPUT: ${localout[$i]}/_.... to"
3764	printf "\n ${pathout[$i]}"
3765	printf "\n Directory will be copied to archive-system ($archive_system) !\n"
3766	fi
3767	mv ${localout[$i]} ${frelout[$i]}
3768
3769	file_saved=false
3770
3771	if [[ $archive_system = asterix ]]
3772	then
3773	do_stageout=true
3774	(( stageout_anz = 0 ))
3775	while [[ $do_stageout = true ]]
3776	do
3777	if [[ $files_for_pes = false ]]
3778	then
3779	stageout ${frelout[$i]} > STAGE_OUTPUT
3780	else
3781	stageout -t ${frelout[$i]} > STAGE_OUTPUT
3782	fi
3783	cat STAGE_OUTPUT
3784	if [[ $(grep -c "st.msg:150" STAGE_OUTPUT) != 0 ]]
3785	then
3786	file_saved=true
3787	do_stageout=false
3788	else
3789	if [[ $files_for_pes = false ]]
3790	then
3791	printf "\n +++ file ${frelout[$i]} could not be saved on archive-system"
3792	else
3793	printf "\n +++ directory ${frelout[$i]} could not be saved on archive-system"
3794	fi
3795	(( stageout_anz = stageout_anz + 1 ))
3796	if (( stageout_anz == 10 ))
3797	then
3798	printf "\n +++ stoped after 10 unsuccessful tries!"
3799	archive_save=false
3800	do_stageout=false
3801	else
3802	printf "\n *** new try to store on archive after 15 min:"
3803	sleep 900
3804	fi
3805	fi
3806	done
3807	elif [[ $archive_system = DMF ]]
3808	then
3809	if [[ $files_for_pes = false ]]
3810	then
3811	printf "\n +++ archiving of single files impossible on $archive_system!\n"
3812	locat=DMF
3813	exit
3814	else
3815	rm -rf $ARCHIVE/${frelout[$i]}
3816	cp -r ${frelout[$i]} $ARCHIVE
3817	fi
3818	file_saved=true
3819	elif [[ $archive_system = tivoli ]]
3820	then
3821	# ARCHIVIERUNG NUR PER BATCH-JOB MOEGLICH
3822	# DATEI MUSS ZWISCHENZEITLICH INS TEMPORAERE DATENVERZEICHNIS
3823	# GELEGT WERDEN
3824	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
3825	chmod g+rx $tmp_data_catalog
3826	if [[ $files_for_pes = false ]]
3827	then
3828	ln -f ${frelout[$i]} $tmp_data_catalog/${frelout[$i]}
3829	else
3830	mkdir $tmp_data_catalog/${frelout[$i]}
3831	ln -f ${frelout[$i]}/* $tmp_data_catalog/${frelout[$i]}
3832	fi
3833
3834	# BATCH JOB GENERIEREN UND ABSCHICKEN; DATEI MUSS WIEDER
3835	# AUS TEMPORAEREM DATENVERZEICHNIS ENTFERNT WERDEN
3836	echo "cd $tmp_data_catalog" > archive_${frelout[$i]}
3837	if [[ $files_for_pes = false ]]
3838	then
3839	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3840	echo "rm -rf \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3841	echo "cp ${frelout[$i]} \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3842	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3843	else
3844	echo "rm -rf \$PERM/${frelout[$i]}.tar" >> archive_${frelout[$i]}
3845	echo "tar cvf \$PERM/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
3846	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3847	fi
3848
3849	subjob -v -d -q cdata -X 0 -m 1000 -t 43200 -c $job_catalog archive_${frelout[$i]}
3850	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
3851	file_saved=true
3852
3853	elif [[ $archive_system = ut ]]
3854	then
3855	# ARCHIVIERUNG NUR PER BATCH-JOB MOEGLICH
3856	# DATEI MUSS ZWISCHENZEITLICH INS TEMPORAERE DATENVERZEICHNIS
3857	# GELEGT WERDEN
3858	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
3859	chmod g+rx $tmp_data_catalog
3860	if [[ $files_for_pes = false ]]
3861	then
3862	ln -f ${frelout[$i]} $tmp_data_catalog/${frelout[$i]}
3863	else
3864	mkdir $tmp_data_catalog/${frelout[$i]}
3865	ln -f ${frelout[$i]}/* $tmp_data_catalog/${frelout[$i]}
3866	fi
3867
3868	# BATCH JOB GENERIEREN UND ABSCHICKEN; DATEI MUSS WIEDER
3869	# AUS TEMPORAEREM DATENVERZEICHNIS ENTFERNT WERDEN
3870	echo "cd $tmp_data_catalog" > archive_${frelout[$i]}
3871	if [[ $files_for_pes = false ]]
3872	then
3873	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3874	echo "rm -rf \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3875	echo "cp ${frelout[$i]} \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3876	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3877	else
3878	echo "rm -rf \$UT/${frelout[$i]}.tar" >> archive_${frelout[$i]}
3879	echo "tar cvf \$UT/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
3880	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3881	fi
3882
3883	subjob -v -c /pf/b/$usern/job_queue -d -q pp -X 0 -m 1000 -t 7200 archive_${frelout[$i]}
3884	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
3885	file_saved=true
3886
3887	else
3888	printf "\n +++ archive_system=\"$archive_system\" archiving impossible!"
3889	archive_save=false
3890	fi
3891	if [[ $file_saved = true ]]
3892	then
3893	if [[ $files_for_pes = false ]]
3894	then
3895	cat /dev/null > ${pathout[$i]}
3896	else
3897	mkdir -p ${pathout[$i]}
3898	fi
3899	fi
3900	fi
3901
3902	# APPEND AUF LOKALER MASCHINE
3903	if [[ "${actionout[$i]}" = "a" ]]
3904	then
3905	printf "\n >>> OUTPUT: ${localout[$i]} append to ${pathout[$i]}\n"
3906	cat ${localout[$i]} >> ${pathout[$i]}
3907	fi
3908
3909	# KOPIEREN AUF LOKALER MASCHINE
3910	# ES MUSS KOPIERT WERDEN, DA MOVE NICHT UEBER FILESYSTEM HINAUS MOEGLICH
3911	if [[ "${actionout[$i]}" = "" && $files_for_pes = false ]]
3912	then
3913
3914	# KOPIEREN AUF EINPROZESSORMASCHINE
3915	if [[ "${extout[$i]}" != " " && "${extout[$i]}" != "" ]]
3916	then
3917	printf "\n >>> OUTPUT: ${localout[$i]} to ${pathout[$i]}.${extout[$i]}\n"
3918	if [[ $link_local_output = true ]]
3919	then
3920	printf " using ln -f\n"
3921	ln -f ${localout[$i]} ${pathout[$i]}.${extout[$i]}
3922	fi
3923	# If "ln -f" fails of if "$link_local_output = false" do a normal "cp"
3924	if [[ ! -f "${pathout[$i]}.${extout[$i]}" ]]
3925	then
3926	if [[ $link_local_output = true ]]
3927	then
3928	printf " ln failed, using cp...\n"
3929	fi
3930	cp ${localout[$i]} ${pathout[$i]}.${extout[$i]}
3931	fi
3932	else
3933	printf "\n >>> OUTPUT: ${localout[$i]} to ${pathout[$i]}\n"
3934	if [[ $link_local_output = true ]]
3935	then
3936	printf " using ln -f\n"
3937	ln -f ${localout[$i]} ${pathout[$i]}
3938	fi
3939	# If "ln -f" fails of if "$link_local_output = false" do a normal "cp"
3940	if [[ ! -f "${pathout[$i]}" ]]
3941	then
3942	if [[ $link_local_output = true ]]
3943	then
3944	printf " ln failed, using cp...\n"
3945	fi
3946	cp ${localout[$i]} ${pathout[$i]}
3947	fi
3948	fi
3949
3950	elif [[ "${actionout[$i]}" = "" && $files_for_pes = true ]]
3951	then
3952
3953	# DIE DEN PROZESSOREN EINES PARALLELRECHNERS ZUGEHOERIGEN
3954	# DATEIEN WERDEN ERST IN EINEM KATALOG GESAMMELT UND DIESER
3955	# WIRD DANN KOPIERT
3956	# PER MOVE UMBENANNT WERDEN
3957	printf "\n >>> OUTPUT: ${localout[$i]}/_.... to ${pathout[$i]}\n"
3958	if [[ $link_local_output = true ]]
3959	then
3960	printf " using ln -f\n"
3961	mkdir ${pathout[$i]}
3962	cd ${localout[$i]}
3963	for file in $(ls *)
3964	do
3965	ln -f $file ${pathout[$i]}
3966	done
3967	cd $TEMPDIR
3968	fi
3969	# If "ln -f" fails of if "$link_local_output = false" do a normal "cp -r"
3970	if [[ ! -f "${pathout[$i]}/_0000" ]]
3971	then
3972	if [[ $link_local_output = true ]]
3973	then
3974	printf " ln failed for .../_0000, using cp...\n"
3975	fi
3976	cp -r ${localout[$i]} ${pathout[$i]}
3977	fi
3978
3979	fi
3980	fi
3981	done
3982	if (( i != 0 ))
3983	then
3984	if [[ $transfer_problems = true ]]
3985	then
3986	printf "\n$striche\n *** OUTPUT-files saved"
3987	printf "\n +++ WARNING: some data transfers failed! \n"
3988	else
3989	printf "\n$striche\n *** all OUTPUT-files saved \n"
3990	fi
3991	fi
3992
3993
3994	# EVENTUELL FOLGEJOB STARTEN
3995	# DATEI CONTINUE_RUN MUSS VOM BENUTZERPROGRAMM AUS ERZEUGT WERDEN
3996	if [[ -f CONTINUE_RUN ]]
3997	then
3998
3999	if [[ $archive_save = true ]]
4000	then
4001
4002	# ZUERST IN MRUN-AUFRUF OPTIONEN FUER FORTSETZUNGSLAUF, FUER
4003	# STILLES ABARBEITEN (OHNE INTERAKTIVE RUECKFAGEN) UND FUER
4004	# BATCH-BETRIEB (NUR WICHTIG, FALLS BATCH AUF LOKALER MASCHINE
4005	# DURCHGEFUEHRT WERDEN SOLL) EINFUEGEN, FALLS NICHT BEREITS VOR-
4006	# HANDEN
4007	[[ $(echo $mc \| grep -c "\-C") = 0 ]] && mc="$mc -C"
4008	[[ $(echo $mc \| grep -c "\-v") = 0 ]] && mc="$mc -v"
4009	[[ $(echo $mc \| grep -c "\-b") = 0 ]] && mc="$mc -b"
4010	if [[ $(echo $mc \| grep -c "#") != 0 ]]
4011	then
4012	mc=`echo $mc \| sed 's/#/f/g'`
4013	fi
4014
4015
4016	# JOB STARTEN
4017	printf "\n\n *** initiating restart-run on \"$return_addres\" using command:\n"
4018	echo " $mc"
4019	printf "\n$striche\n"
4020	if [[ $localhost != $fromhost ]]
4021	then
4022
4023	if [[ $localhost = lcsgih \|\| $localhost = lcsgib \|\| $localhost = nech \|\| $localhost = ibmb \|\| $localhost = ibmh \|\| $localhost = ibms \|\| $localhost = lctit ]]
4024	then
4025	echo "*** ssh will be used to initiate restart-runs!"
4026	echo " return_addres=\"$return_addres\" "
4027	echo " return_username=\"$return_username\" "
4028	if [[ $return_addres = 172.20.25.41 ]]
4029	then
4030	# WORKAROUND AUF SCIROCCO AM TIT
4031	print "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc " \| ssh $return_addres -l $return_username
4032	else
4033	ssh $return_addres -l $return_username "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc "
4034	fi
4035	else
4036	printf "\n +++ no restart mechanism available for host \"$localhost\" "
4037	locat=restart; exit
4038	fi
4039
4040	# WARTEN, DAMIT SICH RESTART JOB IN QUEUE EINREIHEN KANN, BEVOR
4041	# DER AKTUELLE JOB ENDET
4042	sleep 30
4043
4044	else
4045
4046	# BEI RECHNUNGEN AUF LOKALER MASCHINE KANN MRUN DIREKT AUFGE-
4047	# RUFEN WERDEN, AUSSER AUF lcfimm
4048	cd $LOCAL_PWD
4049	if [[ $localhost = lcfimm ]]
4050	then
4051	ssh $return_addres -l $return_username "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc "
4052	else
4053	eval $mc # ' MUESSEN AUSGEWERTET WERDEN
4054	fi
4055	cd - > /dev/null
4056	fi
4057	printf "\n$striche\n *** restart-run initiated \n"
4058
4059
4060	# EVENTUELL INPUT-DATEIEN, DIE VON TEMPORAEREM DATENVERZEICHNIS
4061	# GEHOLT WORDEN SIND, LOESCHEN
4062	(( i = 0 ))
4063	while (( i < iin ))
4064	do
4065	(( i = i + 1 ))
4066	if [[ "${got_tmp[$i]}" = true && $keep_data_from_previous_run = false ]]
4067	then
4068	rm -r $tmp_data_catalog/${frelin[$i]}
4069	fi
4070	done
4071
4072	else
4073
4074	printf "\n +++ no restart-run possible, since errors occured"
4075	printf "\n during the archive process"
4076	fi
4077
4078	fi
4079
4080
4081
4082	# EVTL. EMAIL-BENACHRICHTIGUNG UEBER ABGESCHLOSSENEN LAUF
4083	if [[ "$email_notification" != "" ]]
4084	then
4085
4086	if [[ $localhost != $fromhost ]]
4087	then
4088	if [[ -f CONTINUE_RUN ]]
4089	then
4090	echo "PALM restart run necessary" > email_text
4091	echo "description header of actual run:" >> email_text
4092	cat CONTINUE_RUN >> email_text
4093	echo "mrun-command to restart:" >> email_text
4094	echo "$mc" >> email_text
4095	else
4096	echo "PALM run with base filename \"$fname\" on host \"$localhost\" finished" > email_text
4097	fi
4098	mail $email_notification < email_text
4099	printf "\n *** email notification sent to \"$email_notification\" "
4100	fi
4101	fi
4102
4103
4104
4105	# ALLE ARBEITEN BEENDET. TEMPORAERER KATALOG KANN GELOESCHT WERDEN
4106	cd $HOME
4107	[[ $delete_temporary_catalog = true ]] && rm -rf $TEMPDIR
4108
4109	else
4110
4111
4112	# FALLS AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL, WERDEN JETZT ENTSPRE-
4113	# CHENDE AKTIONEN DURCHGEFUEHRT
4114
4115	# MRUN-BEFEHL FUER REMOTE-MASCHINE ZUSAMMENSTELLEN
4116	mrun_com="$mrun_script_name -a $afname -c $config_file -d $fname -h $host -H $fromhost -m $memory -t $cpumax -q $queue -R $return_addres -U $return_username -u $remote_username"
4117	[[ "$cpp_opts" != "" ]] && mrun_com=${mrun_com}" -D \"$cpp_opts\""
4118	[[ "$global_revision" != "" ]] && mrun_com=${mrun_com}" -G \"$global_revision\""
4119	[[ $group_number != none ]] && mrun_com=${mrun_com}" -g $group_number"
4120	[[ $do_compile = true ]] && mrun_com=${mrun_com}" -s \"$source_list\""
4121	[[ "$input_list" != "" ]] && mrun_com=${mrun_com}" -i \"$input_list\""
4122	[[ $ignore_archive_error = true ]] && mrun_com=${mrun_com}" -I"
4123	[[ $keep_data_from_previous_run = true ]] && mrun_com=${mrun_com}" -k"
4124	[[ "$additional_conditions" != "" ]] && mrun_com=${mrun_com}" -K \"$additional_conditions\""
4125	# [[ "$makefile" != "$source_path/Makefile" ]] && mrun_com=${mrun_com}" -M \"$makefile\""
4126	[[ "$output_list" != "" ]] && mrun_com=${mrun_com}" -o \"$output_list\""
4127	[[ "$read_from_config" = false ]] && mrun_com=${mrun_com}" -S"
4128	[[ $do_trace = true ]] && mrun_com=${mrun_com}" -x"
4129	[[ "$numprocs" != "" ]] && mrun_com=${mrun_com}" -X $numprocs"
4130	if [[ $use_openmp = true ]]
4131	then
4132	mrun_com=${mrun_com}" -O"
4133	[[ "$tasks_per_node" != "" ]] && mrun_com=${mrun_com}" -T $threads_per_task"
4134	else
4135	[[ "$tasks_per_node" != "" ]] && mrun_com=${mrun_com}" -T $tasks_per_node"
4136	fi
4137	[[ $store_on_archive_system = false ]] && mrun_com=${mrun_com}" -A"
4138	[[ $package_list != "" ]] && mrun_com=${mrun_com}" -p \"$package_list\""
4139	[[ $return_password != "" ]] && mrun_com=${mrun_com}" -P $return_password"
4140	[[ $delete_temporary_catalog = false ]] && mrun_com=${mrun_com}" -B"
4141	[[ $node_usage != default && "$(echo $node_usage \| cut -c1-3)" != "sla" && $node_usage != novice ]] && mrun_com=${mrun_com}" -n $node_usage"
4142	[[ "$ocean_file_appendix" = true ]] && mrun_com=${mrun_com}" -y"
4143	[[ $run_coupled_model = true ]] && mrun_com=${mrun_com}" -Y \"$coupled_dist\""
4144	if [[ $do_remote = true ]]
4145	then
4146	printf "\n>>>> MRUN-command on execution host:\n>>>> $mrun_com \n"
4147	fi
4148
4149
4150	# ZUSAMMENSTELLUNG DES JOBSCRIPTS AUF DATEI jobfile
4151	jobfile=jobfile.$RANDOM
4152
4153
4154	# TEMPORAERES VERZEICHNIS GENERIEREN UND NACH DORT WECHSELN
4155	echo "mkdir $TEMPDIR" >> $jobfile
4156	echo "cd $TEMPDIR" >> $jobfile
4157
4158
4159	# EVENTUELL FEHLERVERFOLGUNG AKTIVIEREN
4160	if [[ $do_trace = true ]]
4161	then
4162	echo "set -x" >> $jobfile
4163	else
4164	echo "set +vx" >> $jobfile
4165	fi
4166
4167
4168	# BEREITSTELLUNG VON QUELLTEXTEN, MRUN-SCRIPTS UND KONFIGURATIONS-
4169	# DATEI FUER DEN JOB
4170	if [[ $( echo $host \| cut -c1-5 ) = lcsgi ]]
4171	then
4172
4173	# KONFIGURATIONSDATEI UND MRUN_SCRIPT IN DAS SOURCE-VERZEICHNIS
4174	# KOPIEREN
4175	if [[ $restart_run != true ]]
4176	then
4177	cp $config_file $working_directory/SOURCES_FOR_RUN_$fname
4178	cp ${PALM_BIN}/$mrun_script_name $working_directory/SOURCES_FOR_RUN_$fname
4179	fi
4180
4181	# SOURCE-VERZEICHNIS VOM LOKALEN RECHNER PER SCP TRANSFERIEREN
4182	echo "set -x" >> $jobfile
4183	echo "scp -r $return_username@$return_addres:$working_directory/SOURCES_FOR_RUN_$fname ." >> $jobfile
4184	echo "export SOURCES_COMPLETE=true" >> $jobfile
4185
4186	# QUELLTEXTE, MRUN-SCRIPT UND KONFIGURATIONSDATEI IN DAS AKTUELLE
4187	# ARBEITSVERZEICHNIS VERSCHIEBEN
4188	echo "mv SOURCES_FOR_RUN_$fname/$config_file . " >> $jobfile
4189	echo "mv SOURCES_FOR_RUN_$fname/$mrun_script_name . " >> $jobfile
4190	echo "execute_mrun=true" >> $jobfile
4191	echo " " >> $jobfile
4192
4193	else
4194
4195	# ABSPEICHERN DER QUELLTEXTE (NUR FALLS UEBERSETZT WERDEN SOLL)
4196	# SOWIE GEGEBENENFALLS DES MAKEFILES
4197	if [[ $do_compile = true ]]
4198	then
4199
4200	source_catalog=SOURCES_FOR_RUN_$fname
4201
4202	# UNTERVERZEICHNIS FUER QUELLTEXTE UND MAKEFILE ANLEGEN
4203	# MRUN WIRD DIESES VRZEICHNIS UEBER ENVIRONMENT VARIABLE
4204	# MITGETEILT (UEBERSTEUERT ANGABE IN KONFIGURATIONSDATEI)
4205	echo "mkdir SOURCES_FOR_RUN_$fname" >> $jobfile
4206	echo "export SOURCES_COMPLETE=true" >> $jobfile
4207	echo "cd SOURCES_FOR_RUN_$fname" >> $jobfile
4208
4209	for filename in $source_list
4210	do
4211	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
4212	echo "cat > $filename << \"%END%\"" >> $jobfile
4213	cat $source_catalog/$filename >> $jobfile
4214	echo " " >> $jobfile
4215	echo "%END%" >> $jobfile
4216	echo " " >> $jobfile
4217	done
4218
4219	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
4220	echo "cat > Makefile << \"%END%\"" >> $jobfile
4221	cat $source_catalog/Makefile >> $jobfile
4222	echo " " >> $jobfile
4223	echo "%END%" >> $jobfile
4224	echo " " >> $jobfile
4225
4226	echo "cd - > /dev/null" >> $jobfile
4227
4228	fi
4229
4230
4231	# ABSPEICHERN DER KONFIGURATIONSDATEI
4232	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
4233	echo "cat > $config_file << \"%END%\"" >> $jobfile
4234	cat $config_file >> $jobfile
4235	echo "%END%" >> $jobfile
4236	echo " " >> $jobfile
4237
4238
4239	# ABSPEICHERN DER AKTUELLEN MRUN-VERSION
4240	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
4241	echo "cat > $mrun_script_name <<\"%END%\"" >> $jobfile
4242	cat ${PALM_BIN}/$mrun_script_name >> $jobfile
4243	echo "%END%" >> $jobfile
4244	if [[ $host = lctit ]]
4245	then
4246	echo "sed 's/bin\/ksh/home2\/usr5\/mkanda\/pub\/ksh/' < $mrun_script_name > mrun_new" >> $jobfile
4247	echo "mv mrun_new $mrun_script_name" >> $jobfile
4248	fi
4249	echo "chmod u+x $mrun_script_name" >> $jobfile
4250	echo "execute_mrun=true" >> $jobfile
4251	echo " " >> $jobfile
4252
4253	fi
4254
4255
4256	# EVTL. BENOETIGTE INPUT-DATEIEN PER FTP HOLEN ODER DEM JOB DIREKT
4257	# MITGEBEN UND AUF DEM REMOTE-RECHNER IM BENUTZERVERZEICHNIS ABLEGEN
4258	# FALLS DIESES NICHT EXISTIERT, WIRD VERSUCHT, DAS JEWEILS LETZTE
4259	# UNTERVERZEICHNIS DES PFADNAMENS ANZULEGEN
4260	if [[ $do_remote = true ]]
4261	then
4262	(( i = 0 ))
4263	while (( i < iin ))
4264	do
4265	(( i = i + 1 ))
4266	echo "[[ ! -d ${pathin[$i]} ]] && mkdir -p ${pathin[$i]}" >> $jobfile
4267	if [[ "${transin[$i]}" = job ]]
4268	then
4269	echo "cat > ${remotepathin[$i]} <<\"%END%\"" >> $jobfile
4270	eval cat ${pathin[$i]}/${frelin[$i]} >> $jobfile
4271	echo " " >> $jobfile
4272	echo "%END%" >> $jobfile
4273	else
4274	echo "batch_scp -b -o -g -s -u $return_username $return_addres ${remotepathin[$i]} \"${pathin[$i]}\" ${frelin[$i]}" >> $jobfile
4275	fi
4276
4277	# UEBERPRUEFEN, OB DATEI ANGELEGT WERDEN KONNTE
4278	echo "if [[ \$? = 1 ]]" >> $jobfile
4279	echo "then" >> $jobfile
4280	echo " echo \" \" " >> $jobfile
4281	echo " echo \"+++ file ${remotepathin[$i]} could not be created\" " >> $jobfile
4282	echo " echo \" please check, if directory exists on $host!\" " >> $jobfile
4283	echo " echo \"+++ MRUN will not be continued\" " >> $jobfile
4284	echo " execute_mrun=false" >> $jobfile
4285	echo "fi" >> $jobfile
4286	done
4287	fi
4288
4289	# ARBEITSKATALOG AUF DER LOKALEN MASCHINE FUER EVENTUELLE
4290	# FORTSETZUNGSLAUEFE PER ENV-VARIABLE UEBERGEBEN
4291	echo "LOCAL_PWD=$working_directory" >> $jobfile
4292	echo "export LOCAL_PWD" >> $jobfile
4293
4294	# EBENSO LOKALEN MRUN-KATALOG UEBERGEBEN
4295	echo "LOCAL_MRUN_PATH=$PALM_BIN" >> $jobfile
4296	echo "export LOCAL_MRUN_PATH" >> $jobfile
4297
4298	# WORKAROUND FUER RIAM-NEC-JOBS WEGEN PROFILE-SCHWIERIGKEITEN
4299	if [[ $localhost_realname = "gate" \|\| $localhost = lctit ]]
4300	then
4301	echo "export PALM_BIN=$PALM_BIN" >> $jobfile
4302	fi
4303
4304	# MRUN AUF ZIELRECHNER AUFRUFEN
4305	echo "set -x" >> $jobfile
4306	echo "[[ \$execute_mrun = true ]] && ./$mrun_com" >> $jobfile
4307
4308	echo 'ls -al; echo `pwd`' >> $jobfile
4309	echo "cd \$HOME" >> $jobfile
4310	echo "rm -rf $TEMPDIR" >> $jobfile
4311
4312
4313
4314
4315	# JOB PER SUBJOB STARTEN
4316	if [[ $silent = false ]]
4317	then
4318	printf "\n "
4319	else
4320	printf "\n\n"
4321	fi
4322
4323	subjob $job_on_file -h $host -u $remote_username -g $group_number -q $queue -m $memory -N $node_usage -t $cpumax $XOPT $TOPT $OOPT -n $fname -v -c $job_catalog $jobfile
4324	rm -rf $jobfile
4325
4326
4327	fi # ENDE REMOTE-TEIL
4328
4329
4330
4331	# ENDE DER PROZEDUR

Note: See TracBrowser for help on using the repository browser.

Download in other formats:

| Impressum | ©Leibniz Universität Hannover |