Home

Context Navigation

source: palm/trunk/SCRIPTS/mrun @ 364

Last change on this file since 364 was 362, checked in by letzel, 15 years ago
New: totalview on hice/bice also available for mvapich2 (mrun)
Property svn:keywords set to `Id Rev`
File size: 164.9 KB

Line
1	#!/bin/ksh
2	# mrun - Plot-Shellskript
3	# $Id: mrun 362 2009-08-21 08:48:30Z letzel $
4
5	# Prozedur zum Starten von Modellaeufen
6
7	# letzte Aenderung:
8	# 03/03/94 - Siggi - Entwicklungsbeginn
9	# 21/03/94 - Siggi - Entwicklungsabschluss (Version 1.0)
10	# 09/12/94 - Siggi - allexport unterbunden; statt dessen werden jetzt ein-
11	# zelne Variable exportiert. Dies ist noetig, weil an-
12	# sonsten irgendein Speicher ueberlaeuft und von mrun
13	# aufgerufene Programme (z.B. stageout) mit Fehlern
14	# abbrechen (too many arguments)
15	# 20/06/95 - Siggi - noclobber muss explizit abgeschaltet, da jetzt
16	# defaultmaessig im RRZN-Profile eingeschaltet
17	# 10/06/97 - Siggi - Zusaetzliche Option -C bei cpp, damit // nicht
18	# wegfallen
19	# 25/04/00 - Siggi - Version 1.5
20	# remote_addres und remote_user in return_addres bzw.
21	# return_username umbenannt, return_username wird dem
22	# mrun-Aufruf im Job ueber Option -U mitgegeben.
23	# Neue Variable remote_username, die beim interaktiven
24	# mrun-Aufruf zwingend ueber die neue Option -u oder
25	# in der Konfigurationsdatei angegeben werden muss.
26	# 08/02/01 - Siggi - Alle mrun-Meldungen ins englische uebersetzt,
27	# Version 1.7
28	# 05/05/02 - Siggi - Uebersetzungen mittels make-Mechanismus moeglich
29	# 21/11/02 - Siggi - ENV-Variable XLFRTEOPTS wird vor Ausfuehrung auf
30	# IBM gesetzt, um Record-Laenge der NAMELIST-Dateien,
31	# zu bestimmen; Praeprozessoroptionen haben nun alle
32	# die Form -Dtext=text, weil auf IBM sonst text durch
33	# die leere Zeichenkette ersetzt wird
34	# 01/08/03 - Siggi - Test of implementing dvrp+1PE on ibm
35	# 07/01/04 - Siggi - additional preprocessor directive for ibm included
36	# (-D$OMP=OMP) in order to avoid problems with
37	# OMP_NUM_THREADS
38	# 04/01/05 - Siggi - archiving on hanni and berni is done in separate
39	# tar files, one for each node used
40	# 07/01/04 - Siggi - old code for t3e, vpp and hpcs eliminated
41	# 09/01/05 - Siggi - workaround for getting the IP address on gfdl3
42	# 17/01/05 - Siggi - job for data transfer to local machine now within
43	# job class c1 (HLRN)
44	# 27/01/05 - Siggi - IP address workaround for gfdl3 removed
45	# 28/01/05 - Siggi - tar-filenames on $PERM (HLRN) now include the
46	# base filename and cycle number
47	# 16/02/05 - Gerald - hababai validated
48	# 14/03/05 - Siggi - abort on NEC after first runtime error (F_ERRCNT)
49	# 29/03/05 - Marcus - berni*-en0 validated
50	# 21/04/05 - Siggi - transfer-job-protocol for avs-data is no more stored
51	# 24/04/05 - Siggi - netcdf support on lcmuk
52	# 25/04/05 - Siggi - netcdf support on gfld3 (decalpha)
53	# 11/05/05 - Siggi - files with non-numeric extensions (.xxx after cycle
54	# number) can now be used within interactive runs
55	# 12/05/05 - Siggi - netcdf support on ibm
56	# 13/05/05 - Siggi - error in tar-filenames on $PERM (HLRN) removed
57	# 18/05/05 - Siggi - netcdf support on nec
58	# 24/05/05 - Siggi - netcdf support on ibms
59	# 14/06/05 - Siggi - sleep interval after submit of restart job increased
60	# to 30 seconds
61	# 28/06/05 - Siggi - bora adjusted to new intel compiler (LD_LIBRARY_
62	# PATH is temporarily set)
63	# 07/09/05 - Siggi - setting of MP_EAGER_LIMIT switched off because it
64	# caused warnings in the job protocol
65	# 20/10/05 - Siggi - update of netcdf-version on decalpha (gfdl3)
66	# 25/10/05 - Siggi - error in listing files for getting the cycle number
67	# removed
68	# 26/10/05 - Siggi - new paths for dvrp-library, transfer of catalogs
69	# realized by file attribute trpe
70	# 28/10/05 - Siggi - if existing, the file extension is output in case
71	# of missing input file - no job abort in case of
72	# missing input files with file extensions
73	# (preliminary solution)
74	# 31/10/05 - Siggi - data transfer from nech now within seperate job
75	# 04/11/05 - Siggi - netcdf 3.6.0-p1 on ibmh/ibmb
76	# 07/12/05 - Siggi - gallego and elephanta admitted
77	# 30/12/05 - Siggi - gfdl5 (ibmy) admitted
78	# 10/01/06 - Siggi - cpp directive for NetCDF 64bit support
79	# 20/01/06 - Siggi - cpp directive for ibmy
80	# 09/02/06 - Siggi - ibmy admitted for batch mode
81	# 13/04/06 - Siggi - ostria admitted
82	# 18/04/06 - Siggi - usage of OpenMP implemented (additional option -O)
83	# 10/05/06 - Siggi - environment variable XLSMPOPTS set on IBM for
84	# optimization of OpenMP runs (option stacksize is
85	# necessary for large gridpoint numbers because
86	# otherwise a segmentation fault occurs)
87	# 23/05/05 - Siggi - lctit (SUN Fire X4600) admitted
88	# 21/08/06 - Siggi - standard mrun path on scirocco is as on bora
89	# 23/08/06 - Siggi - netcdf support for scirocco (notebook)
90	# 20/09/06 - Marcus - add DVRP library on nech
91	# 24/10/06 - Siggi - Environment variables for PALM steering are written
92	# on local NAMELIST file ENVPAR
93	# 24/11/06 - Siggi - levanto admitted, maestro switched to ifc 9.1
94	# 28/11/06 - Siggi - call to interpret_config.x_levanto because of SuSe 10
95	# 06/02/07 - Siggi - add DVRP library on lcmuk
96	# 07/02/07 - Siggi - revision of source code handling, source code is
97	# now expected in directory given by source_path and
98	# not in the current working directory, source code
99	# files provided in add_source_path are allways
100	# compiled, source code to be compiled is allways
101	# sampled in SOURCES_FOR_RUN_$fname which is a
102	# subdirectory of the current working directory,
103	# -s TEST changed to -s WRITE_PERMIT or -s WP,
104	# adapted for RIAM (neck)
105	# bugfix for cycle number of output file (extout)
106	# all hpmuk-related code removed
107	# 14/02/07 - Siggi - dvrp support for neck added
108	# 28/02/07 - Siggi - empty lines in configuration file are accepted
109	# mrun_path replaced by PALM_BIN,
110	# all machines are calling interpret_config.x
111	# 14/03/07 - Siggi - fimm admitted, revision number added to terminal
112	# output
113	# 16/03/07 - Siggi - adjustments for lctit
114	# 29/03/07 - Siggi - global revision transfered to batch job by new
115	# option -G
116	# 30/03/07 - Siggi - compilation "by hand" removed, cpp-directives/options
117	# + netcdf/dvrp-options are read from configuration
118	# file, host identifier (local_host) is read from
119	# config file, code related to ftp filetransfer
120	# removed (incl. option -f)
121	# 19/06/07 - Siggi - time limit for cdata jobs increased
122	# 25/07/07 - Siggi - two sets of executables can be started on lcmuk,
123	# if new option -Y (coupling) is given,
124	# output of executables to aout_output removed,
125	# messages are immediately written to stdout instead
126	# 03/08/07 - Marcus - add XOPT="-X $numprocs" for lcfimm
127	# 09/08/07 - Marcus - workaround on lcfimm to propagate environment
128	# variables out to the nodes in coupled mode -disabled-
129	# 13/08/07 - Marcus - start local restart jobs per ssh on lcfimm
130	# 28/08/07 - Marcus - completely remove workaround on lcfimm to propagate
131	# environment variables out to the nodes in coupled mode
132	# 15/10/07 - Siggi - Preliminary adjustments for lctit, based on Jin's
133	# suggestions
134	# 19/10/07 - Marcus - further adjustments for lctit: add new optional
135	# argument -g group_number, admit all sla* node_usage
136	# queues
137	# 30/10/07 - Marcus - further adjustments for queues on lctit
138	# 14/02/08 - Bjoern - link of restart files with long file name possible
139	# 28/02/08 - Marcus - If environment variable link_local_output is set to
140	# true, mrun tries "ln -f" on local output and resorts
141	# to "cp" or "cp -r" on error
142	# 15/04/08 - Siggi - argument -c introduced to most of the subjob calls,
143	# which allows the user to choose his own job catalog
144	# by setting job_catalog in the configuration file
145	# (default is ~/job_queue),
146	# workaround for mpiexec with -env option,
147	# adjustments for lcxt4 (Bergen Center for Computational
148	# Science)
149	# 22/05/08 - Marcus - If environment variable link_local_input is set to
150	# true, mrun tries "ln -f" on local input and resorts
151	# to "cp" or "cp -r" on error
152	# 27/05/08 - Siggi - PATH is set to PALM_BIN everywhere (missing so far)
153	# 14/07/08 - Siggi - adjustments for lcsgih
154	# 08/08/08 - Marcus - typo removed in lcxt4 branch
155	# 17/09/08 - Siggi - restart mechanism adjusted for lcsgi
156	# 02/10/08 - BjornM - argument "-Y" modified, adjustments for coupled runs
157	# 21/10/08 - Siggi - bugfix for the case that -K has more than one
158	# argument
159	# 08/11/08 - Siggi - bugfix for depository path settings in configuration
160	# file
161	# 11/11/08 - Siggi - rules for using user code files changed: user
162	# code splitted into one file per subroutine,
163	# user can provide his/her own makefile, only
164	# default source-code filenames are allowed
165	# 14/11/08 - Siggi - cond1 and cond2 are part of the depository name
166	# 08/01/09 - Siggi - mpi module on sgi machines to be used can be set
167	# with environment variable mpilib
168	# 13/01/09 - Siggi - totalview on hice/bice can be used in debug mode
169	# using environment variable totalview
170	# 25/02/09 - Siggi - cputime-option (-t) is allowed to be omitted for
171	# interactive runs
172	# 05/03/09 - Siggi - adjustments for new NEC-SX9 at RIAM (necriam)
173	# 16/03/09 - Siggi - dvrp_lib, dvrp_inc replaced by dvr_lib, dvr_inc,
174	# dvr streaming server is automatically started using
175	# new variable dvr_server and a configuration file
176	# .dvrserver.config,
177	# processing of dvr output files using new script
178	# process_dvr_output implemented, in order to make
179	# dvr application more user friendly
180	# 20/03/09 - Marcus - update of n1ge command for lctit
181	# 16/04/09 - Siggi - new option -y for precursor (uncoupled) ocean runs
182	# to be followed by a coupled atmosphere-ocean run
183	# 21/04/09 - Siggi - adjustments for new IBM at DKRZ, which is now ibmh
184	# 24/06/09 - BjornM - adjustments for coupled/precursor runs on ibmy
185	# 08/07/09 - Siggi - default value for email_notification is none,
186	# option -e added to subjob
187	# 19/08/09 - Marcus - MPI debug option
188	# 21/08/09 - Marcus - totalview on hice/bice also available for mvapich2
189
190
191	# VARIABLENVEREINBARUNGEN + DEFAULTWERTE
192
193	set +o allexport # SICHERHEITSHALBER UNTERBINDEN, DA SONST EVTL. STAGEOUT
194	# NICHT LAUEFT (TOO MANY ARGUMENTS - PROBLEM)
195	set +o noclobber # EXISTIERENDE DATEIEN DUERFEN UEBERSCHRIEBEN WERDEN
196
197	AddFilenames=""
198	additional_conditions=""
199	add_source_path=""
200	afname=""
201	archive_save=true
202	archive_system=none
203	compiler_name=""
204	cond1=""
205	cond2=""
206	config_file=.mrun.config
207	coupled_dist=""
208	coupled_mode="mpi1"
209	cpp_opts=""
210	cpp_options=""
211	cpumax=0
212	cpurest=0
213	delete_temporary_catalog=true
214	do_batch=false
215	do_compile=true
216	do_remote=false
217	do_stagein=true
218	do_stageout=true
219	do_trace=false
220	email_notification="none"
221	exclude=""
222	executable=""
223	execution_error=false
224	fimm=false
225	fname=test
226	fromhost=""
227	global_revision=""
228	group_number=none
229	host=""
230	host_file=""
231	hp=""
232	ignore_archive_error=false
233	input_list=""
234	interpreted_config_file=""
235	job_catalog="~/job_queue"
236	job_on_file=""
237	keep_data_from_previous_run=false
238	link_local_input=false
239	link_local_output=false
240	localhost_realname=$(hostname)
241	local_compile=false
242	local_dvrserver_running=.FALSE.
243	locat=normal
244	mainprog=""
245	makefile=""
246	mc=$0
247	while [[ $(echo $mc \| grep -c "/") != 0 ]]
248	do
249	mc=`echo $mc \| cut -f2- -d"/"`
250	done
251	module_files=""
252	mrun_script_name=$mc
253	netcdf_inc=""
254	netcdf_lib=""
255	netcdf_support=false
256	node_usage=default
257	numprocs=""
258	numprocs_atmos=0
259	numprocs_ocean=0
260	OOPT=""
261	openmp=false
262	output_list=""
263	package_list=""
264	punkte="..........................................................."
265	queue=none
266	read_from_config=""
267	restart_run=false
268	return_addres=$(nslookup `hostname` 2>&1 \| grep "Address:" \| tail -1 \| awk '{print $2}')
269	if [[ $return_addres = 130.75.105.158 ]]
270	then
271	return_addres=172.20.25.41
272	echo "+++ WARNING: return_addres changed to $return_addres !!!!!"
273	fi
274	return_password=""
275	return_username=$LOGNAME
276	remotecall=false
277	remote_username=""
278	run_coupled_model=false
279	run_mode=""
280	scirocco=false
281	store_on_archive_system=true
282	striche=" ----------------------------------------------------------------------------"
283	silent=false
284	source_list=""
285	source_path=SOURCE
286	tasks_per_node=""
287	threads_per_task=1
288	tmpcreate=false
289	tmp_data_catalog=""
290	transfer_problems=false
291	usern=$LOGNAME
292	working_directory=`pwd`
293	TOPT=""
294	XOPT=""
295	zeit=$( date \| cut -c 12-19 )
296
297	typeset -i iec=0 iic=0 iin=0 ioc=0 iout=0 memory=0 stagein_anz=0 stageout_anz=0
298	typeset -i cputime i ii iia iii iio icycle inode ival jobges jobsek maxcycle minuten nodes pes sekunden tp1
299
300	typeset -R30 calltime
301	typeset -L20 spalte1
302	typeset -L40 spalte2
303	typeset -L60 spalte3
304	typeset -L35 string1=`date`
305	typeset -L12 string2=$usern
306	typeset -L12 string3=$localhost_realname
307	typeset -L12 string4
308	typeset -L12 string5
309	typeset -L30 version="MRUN 2.0 Rev$Rev: 362 $"
310
311
312
313	# EINZELNE VARIABLE FUER HAUPTPROGRAMM EXPORTIEREN
314	export cpurest fname host localhost return_addres return_username remotecall tasks_per_node
315
316	# FOLGENDE VARIABLEN MUESSEN FUER DIE INTERPRETATION DER KONFIGURATIONSDATEI
317	# EXPORTIERT WERDEN
318	export afname config_file cpp_opts cpumax do_batch do_trace fname fromhost
319	export group_number input_list memory numprocs output_list queue run_mode
320
321
322
323	# FEHLERBEHANDLUNG
324	# BEI EXIT:
325	trap 'rm -rf $working_directory/tmp_mrun
326	if [[ $locat != localhost ]]
327	then
328	# if [[ ! -f ${mrun_path}/statistik/mrun_statistik ]]
329	# then
330	# cat > ${mrun_path}/statistik/mrun_statistik << %STATEND%
331	#MRUN-calls on $localhost
332	#
333	#date and time user localhost remotehost termination mrun-command
334	#--------------------------------------------------------------------------------------------------------------------
335	#%STATEND%
336	# chmod 666 ${mrun_path}/statistik/mrun_statistik
337	# fi
338	#
339	# # EINTRAG IN DIE STATISTIK-DATEI
340	# string4=$host
341	# string5=$locat
342	# if [[ "$job_on_file" = "" && $locat != control_c && $locat != user_abort ]]
343	# then
344	# if [[ $do_batch = true ]]
345	# then
346	# printf "$string1$string2$string3$string4$string5$mrun_com \n" >> ${mrun_path}/statistik/mrun_statistik
347	# else
348	# printf "$string1$string2$string3$string4$string5$mc \n" >> ${mrun_path}/statistik/mrun_statistik
349	# fi
350	# fi
351	echo " " > /dev/null
352	fi
353
354	if [[ $locat != normal && $locat != control_c && $locat != local_compile ]]
355	then
356
357	# EVENTUELLE ERROR-KOMMANDOS ABARBEITEN
358	(( i = 0 ))
359	while (( i < iec ))
360	do
361	(( i = i + 1 ))
362	printf "\n *** Execution of ERROR-command:\n"
363	printf " >>> ${err_command[$i]}\n"
364	eval ${err_command[$i]}
365	done
366	if [[ -n $interpreted_config_file ]] then
367	rm -rf $interpreted_config_file
368	fi
369	if [[ -n .mrun_environment ]] then
370	rm -rf .mrun_environment
371	fi
372	if [[ $tmpcreate = true ]]
373	then
374	printf "\n *** Contents of \"$TEMPDIR\":\n"
375	ls -al; cd
376	[[ $delete_temporary_catalog = true ]] && rm -rf $TEMPDIR
377	fi
378	if [[ "$dvrserver_id" != "" ]]
379	then
380	echo "+++ killing dvrserver_id=$dvrserver_id"
381	kill $dvrserver_id
382	fi
383	if [[ -f ~/job_queue/JOBINFO.$QSUB_REQID ]]
384	then
385	rm -rf ~/job_queue/JOBINFO.$QSUB_REQID
386	fi
387	printf "\n\n+++ MRUN killed \n\n"
388	elif [[ $locat != control_c ]]
389	then
390	printf "\n\n --> all actions finished\n\n"
391	printf " Bye, bye $usern !!\n\n"
392	fi' exit
393
394
395	# BEI TERMINAL-BREAK:
396	trap 'rm -rf $working_directory/tmp_mrun
397	[[ $tmpcreate = true ]] && (cd; rm -rf $TEMPDIR)
398	if [[ -f ~/job_queue/JOBINFO.$QSUB_REQID ]]
399	then
400	rm -rf ~/job_queue/JOBINFO.$QSUB_REQID
401	fi
402	if [[ "$dvrserver_id" != "" ]]
403	then
404	echo "+++ killing dvrserver_id=$dvrserver_id"
405	kill $dvrserver_id
406	fi
407	printf "\n+++ MRUN killed by \"^C\" \n\n"
408	locat=control_c
409	exit
410	' 2
411
412
413	# CHECK IF THE PATH FOR THE PALM BINARIES (SCRIPTS+UTILITY-PROGRAMS) HAS
414	# BEEN SET
415	if [[ "$PALM_BIN" = "" ]]
416	then
417	printf "\n +++ environment variable PALM_BIN has not been set"
418	printf "\n please set it to the directory where the PALM scripts are located"
419	locat=palm_bin; exit
420	fi
421	export PATH=$PALM_BIN:$PATH
422
423
424
425	# SHELLSCRIPT-OPTIONEN EINLESEN UND KOMMANDO NEU ZUSAMMENSETZEN, FALLS ES
426	# FUER FOLGEJOBS BENOETIGT WIRD
427	while getopts :a:AbBc:Cd:D:Fg:G:h:H:i:IkK:m:M:n:o:Op:P:q:r:R:s:St:T:u:U:vxX:yY: option
428	do
429	case $option in
430	(a) afname=$OPTARG;;
431	(A) store_on_archive_system=false; mc="$mc -A";;
432	(b) do_batch=true; mc="$mc -b";;
433	(B) delete_temporary_catalog=false; mc="$mc -B";;
434	(c) config_file=$OPTARG; mc="$mc -c$OPTARG";;
435	(C) restart_run=true; mc="$mc -C";;
436	(d) fname=$OPTARG; mc="$mc -d$OPTARG";;
437	(D) cpp_opts="$cpp_opts $OPTARG"; mc="$mc -D'$OPTARG'";;
438	(F) job_on_file="-D"; mc="$mc -F";;
439	(g) group_number=$OPTARG; mc="$mc -g$OPTARG";;
440	(G) global_revision=$OPTARG; mc="$mc -G'$OPTARG'";;
441	(h) host=$OPTARG; mc="$mc -h$OPTARG";;
442	(H) fromhost=$OPTARG; mc="$mc -H$OPTARG";;
443	(i) input_list=$OPTARG; mc="$mc -i'$OPTARG'";;
444	(I) ignore_archive_error=true; mc="$mc -I";;
445	(k) keep_data_from_previous_run=true; mc="$mc -k";;
446	(K) additional_conditions="$OPTARG"; mc="$mc -K'$OPTARG'";;
447	(m) memory=$OPTARG; mc="$mc -m$OPTARG";;
448	(M) makefile=$OPTARG; mc="$mc -M$OPTARG";;
449	(n) node_usage=$OPTARG; mc="$mc -n$OPTARG";;
450	(o) output_list=$OPTARG; mc="$mc -o'$OPTARG'";;
451	(O) use_openmp=true; mc="$mc -O";;
452	(p) package_list=$OPTARG; mc="$mc -p'$OPTARG'";;
453	(P) return_password=$OPTARG; mc="$mc -P$OPTARG";;
454	(q) queue=$OPTARG; mc="$mc -q$OPTARG";;
455	(r) run_mode=$OPTARG; mc="$mc -r'$OPTARG'";;
456	(R) remotecall=true;return_addres=$OPTARG; mc="$mc -R$OPTARG";;
457	(s) source_list=$OPTARG; mc="$mc -s'$OPTARG'";;
458	(S) read_from_config=false; mc="$mc -S";;
459	(t) cpumax=$OPTARG; mc="$mc -t$OPTARG";;
460	(T) tasks_per_node=$OPTARG; mc="$mc -T$OPTARG";;
461	(u) remote_username=$OPTARG; mc="$mc -u$OPTARG";;
462	(U) return_username=$OPTARG; mc="$mc -U$OPTARG";;
463	(v) silent=true; mc="$mc -v";;
464	(x) do_trace=true;set -x; mc="$mc -x";;
465	(X) numprocs=$OPTARG; mc="$mc -X$OPTARG";;
466	(y) ocean_file_appendix=true; mc="$mc -y";;
467	(Y) run_coupled_model=true; coupled_dist=$OPTARG; mc="$mc -Y'$OPTARG'";;
468	(\?) printf "\n +++ unknown option $OPTARG \n"
469	printf "\n --> type \"$0 ?\" for available options \n"
470	locat=parameter;exit;;
471	esac
472	done
473
474
475	# EVTL. POSITIONSPARAMETER EINLESEN
476	# ZUR ZEIT GIBT ES NUR DEN PARAMETER ? (=KURZINFO)
477	shift OPTIND-1
478
479
480	# KURZE AUFRUFBESCHREIBUNG WIRD HIER AUSGEGEBEN
481	if [[ "$1" = "?" ]]
482	then
483	(printf "\n *** mrun can be called as follows:\n"
484	printf "\n $mrun_script_name -b -c.. -d.. -D.. -f.. -F -h.. -i.. -I -K.. -m.. -o.. -p.. -r.. -R -s.. -t.. -T.. -v -x -X.. -y -Y.. <modus>\n"
485	printf "\n Description of available options:\n"
486	printf "\n Option Description Default-Value"
487	printf "\n -a base name of input files equiv. -d"
488	printf "\n -A no archiving when using file-attribute fl"
489	printf "\n -b batch-job on local machine ---"
490	printf "\n -B do not delete temporary directory at end ---"
491	printf "\n -c configuration file .mrun.config"
492	printf "\n -d base name of files attached to program test"
493	printf "\n -D preprocessor(cpp)-directives \"\" "
494	printf "\n -F create remote job file only ---"
495	printf "\n -h execution host $localhost_realname"
496	printf "\n -i INPUT control list \"\" "
497	printf "\n -I archiving errors of previous batch-jobs"
498	printf "\n will be ignored"
499	printf "\n -k keep data from previous run"
500	printf "\n -K additional conditions for controling"
501	printf "\n usage of conditional code and"
502	printf "\n env-variables in configuration file \"\" "
503	printf "\n -m memory demand in MB (batch-jobs) 0 MB"
504	printf "\n -M Makefile name Makefile"
505	printf "\n -n node usage (shared/not_shared) depending on -h"
506	printf "\n -o OUTPUT control list \"\" "
507	printf "\n -O use OpenMP ---"
508	printf "\n -p software package list \"\" "
509	printf "\n -q queue \"$queue\" "
510	printf "\n -r run control list (combines -i -o) \"\" "
511	printf "\n -s filenames of routines to be compiled \"\" "
512	printf "\n must end with .f, .f90, .F, or .c !"
513	printf "\n use \"..\" for more than one file and wildcards"
514	printf "\n -s TEST compiles all files with w-permit"
515	printf "\n -S config file interpreted by shellscript ---"
516	printf "\n -t allowed cpu-time in seconds (batch) 0"
517	printf "\n -T tasks per node depending on -h"
518	printf "\n -u username on remote machine \"\" "
519	printf "\n -v no prompt for confirmation ---"
520	printf "\n -x tracing of mrun for debug purposes ---"
521	printf "\n -X # of processors (on parallel machines) 1"
522	printf "\n -y add appendix \"_O\" to all local output"
523	printf "\n files (ocean precursor runs followed by"
524	printf "\n coupled atmosphere-ocean runs) ---"
525	printf "\n -Y run coupled model, \"#1 #2\" with"
526	printf "\n #1 atmosphere and #2 ocean processors \"#/2 #/2\" depending on -X"
527	printf "\n "
528	printf "\n Possible values of positional parameter <modus>:"
529	printf "\n \"?\" - this outline \n\n") \| more
530	exit
531	elif [[ "$1" != "" ]]
532	then
533	printf "\n +++ positional parameter $1 unknown \n"
534	locat=parameter; exit
535	fi
536
537
538
539	# KURZE STARTMELDUNG
540	printf "\n*** $version "
541	printf "\n will be executed. Please wait ..."
542
543
544
545	# PRUEFEN, OB KONFIGURATIONS-DATEI VORHANDEN
546	if [[ ! -f $config_file ]]
547	then
548	printf "\n\n +++ configuration file: "
549	printf "\n $config_file"
550	printf "\n does not exist"
551	locat=connect; exit
552	fi
553
554
555	# HOST-IDENTIFIER (local_host) AUS KONFIGURATIONSDATEI BESTIMMEN
556	line=""
557	grep "%host_identifier" $config_file > tmp_mrun
558	while read line
559	do
560	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
561	then
562	HOSTNAME=`echo $line \| cut -d" " -s -f2`
563	host_identifier=`echo $line \| cut -d" " -s -f3`
564	if [[ $localhost_realname = $HOSTNAME ]]
565	then
566	localhost=$host_identifier
567	break
568	fi
569	fi
570	done < tmp_mrun
571
572	if [[ "$localhost" = "" ]]
573	then
574	printf "\n\n +++ no host identifier found in configuration file \"$config_file\""
575	printf "\n for local host \"$localhost_realname\"."
576	printf "\n Please add line"
577	printf "\n \"\%host_identifier $localhost_realname <identifier>\""
578	printf "\n to the configuration file."
579	locat=localhost; exit
580	fi
581
582
583	# HOSTSPEZIFISCHE VARIABLEN SETZEN
584	case $localhost_realname in
585	(breg-en0\|berni-en0) archive_system=tivoli;;
586	(cs*) archive_system=ut;;
587	(fimm.bccs.uib.no) fimm=true;;
588	(gate\|n-sx) PATH=$PALM_BIN:$PATH:/usr/bin/nqsII;;
589	(hreg-en0\|hanni-en0) archive_system=tivoli;;
590	(scirocco) scirocco=true;;
591	esac
592
593
594
595	# BASISNAME DER INPUT-DATEIEN GLEICH ALLGEMEINEM BASISNAMEN SETZEN,
596	# WENN NICHT VOM BENUTZER ANDERS BESTIMMT
597	[[ "$afname" = "" ]] && afname=$fname
598
599
600	# EVTL. RUN-MODUS DEN I/O-LISTEN HINZUFUEGEN
601	if [[ "$run_mode" != "" ]]
602	then
603	input_list="$input_list $run_mode"
604	output_list="$output_list $run_mode"
605	fi
606
607
608	# RECHNERNAMEN ABSPEICHERN, VON DEM AUS JOB GESTARTET WIRD,
609	# ALLERDINGS NUR DANN, WENN NICHT PER OPTION -H BEREITS EIN WERT
610	# ZUGEWIESEN WURDE (MRUN MACHT DIES IMMER, WENN ES SELBST BATCH-JOBS
611	# STARTET)
612	if [[ "$fromhost" = "" ]]
613	then
614	fromhost=$localhost
615	fi
616
617
618	# PRUEFEN, OB MRUN NUR TESTWEISE AUF DER LOKALEN MASCHINE KOMPILIEREN SOLL
619	if [[ "$source_list" = LOCAL_COMPILE_TEST ]]
620	then
621	source_list=TEST
622	local_compile=true
623	host=$localhost
624	fi
625
626
627	# PRUEFEN, OB AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL
628	# WERT VON do_remote WIRD FUER DATEIVERBINDUNGEN BENOETIGT.
629	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
630	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
631	if [[ -n $host && "$host" != $localhost ]]
632	then
633	do_batch=true
634	do_remote=true
635	case $host in
636	(ibm\|ibmb\|ibmh\|ibms\|ibmy\|nech\|necriam\|lcsgib\|lcsgih\|lctit\|unics\|lcxt4) true;;
637	(*) printf "\n"
638	printf "\n +++ sorry: execution of batch jobs on remote host \"$host\""
639	printf "\n is not available"
640	locat=nqs; (( iec = 0 )); exit;;
641	esac
642	else
643	host=$localhost
644	fi
645
646
647	# ZUSATZBEDINGUNGEN (OPTION -K) AUSWERTEN
648	if [[ -n $additional_conditions ]]
649	then
650	# echo $additional_conditions \| cut -d" " -f1-3 \| read cond1 cond2 dummy
651	cond1=`echo $additional_conditions \| cut -d" " -f1`
652	cond2=`echo $additional_conditions \| cut -d" " -s -f2`
653	dummy=`echo $additional_conditions \| cut -d" " -s -f3`
654	if [[ -n $dummy ]]
655	then
656	printf "\n +++ more than 2 additional conditions given for Option \"-K\""
657	locat=options; exit
658	fi
659	fi
660
661
662	# KOPPLUNGSEIGENSCHAFTEN (-Y) AUSWERTEN UND coupled_mode BESTIMMEN
663	if [[ $run_coupled_model = true ]]
664	then
665
666	if [[ -n $coupled_dist ]]
667	then
668
669	numprocs_atmos=`echo $coupled_dist \| cut -d" " -s -f1`
670	numprocs_ocean=`echo $coupled_dist \| cut -d" " -s -f2`
671
672	if (( $numprocs_ocean + $numprocs_atmos != $numprocs ))
673	then
674
675	printf "\n +++ number of processors does not fit to specification by \"-Y\"."
676	printf "\n PEs (total) : $numprocs"
677	printf "\n PEs (atmosphere): $numprocs_atmos"
678	printf "\n PEs (ocean) : $numprocs_ocean"
679	locat=coupling; exit
680
681	# REARRANGING BECAUSE CURRENTLY ONLY 1:1 TOPOLOGIES ARE SUPPORTED
682	# THIS SHOULD BE REMOVED IN FUTURE
683	elif (( $numprocs_ocean != $numprocs_atmos ))
684	then
685
686	printf "\n +++ currently only 1:1 topologies are supported"
687	printf "\n PEs (total) : $numprocs"
688	printf "\n PEs (atmosphere): $numprocs_atmos"
689	printf "\n PEs (ocean) : $numprocs_ocean"
690	(( numprocs_atmos = $numprocs / 2 ))
691	(( numprocs_ocean = $numprocs / 2 ))
692	printf "\n +++ rearranged topology to $numprocs_atmos:$numprocs_ocean"
693
694	fi
695
696	else
697
698	(( numprocs_ocean = $numprocs / 2 ))
699	(( numprocs_atmos = $numprocs / 2 ))
700
701	fi
702	coupled_dist=`echo "$numprocs_atmos $numprocs_ocean"`
703
704	# GET coupled_mode FROM THE CONFIG FILE
705	line=""
706	grep "%cpp_options.-D__mpi2.$host" $config_file > tmp_mrun
707	while read line
708	do
709	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" && ( $(echo $line \| cut -d" " -s -f4) = $cond1 \|\| $(echo $line \| cut -d" " -s -f4) = $cond2 ) ]]
710	then
711	coupled_mode="mpi2"
712	fi
713	done < tmp_mrun
714
715	fi
716
717
718	# PRUEFEN, OB EVTL. BEI VORHERGEHENDEM LAUF (KETTENJOB) EINE
719	# ARCHIVIERUNG FEHLGESCHLAGEN IST
720	if [[ -f ~/job_queue/ARCHIVE_ERROR_$fname ]]
721	then
722	if [[ $ignore_archive_error = false ]]
723	then
724	printf "\n +++ data archiving of previous run failed"
725	printf "\n see directory \~/job_queue on remote machine"
726	locat=archive; exit
727	else
728	printf "\n +++ warning: data archiving in a previous run failed"
729	printf "\n MRUN continues, trying to get backup copy"
730	fi
731	fi
732
733
734
735	# LESEN UND INTERPRETIEREN DER KONFIGURATIONS-DATEI VOM SHELLSCRIPT AUS
736	# VORUEBERGEHEND ZWINGEND AUF LINUX-RECHNERN
737	if [[ "$read_from_config" = false ]]
738	then
739
740	[[ $silent = false ]] && printf "\n Reading the configuration file... "
741	while read zeile
742	do
743	[[ $silent = false ]] && printf "."
744
745
746	# ZUERST EVENTUELL VORKOMMENDE ENVIRONMENT-VARIABLEN DURCH IHRE WERTE
747	# ERSETZEN
748	eval zeile=\"$zeile\"
749
750
751	# INTERPRETATION DER ZEILE
752	if [[ "$(echo $zeile)" = "" ]]
753	then
754	# LEERZEILE, KEINE AKTION
755	continue
756
757	elif [[ "$(echo $zeile \| cut -c1)" = "#" ]]
758	then
759
760	# ZEILE IST KOMMENTARZEILE
761	true
762
763	elif [[ "$(echo $zeile \| cut -c1)" = "%" ]]
764	then
765
766	# ZEILE DEFINIERT ENVIRONMENT-VARIABLE
767	zeile=$(echo $zeile \| cut -c2-)
768	# echo $zeile \| cut -d" " -f1-5 \| read var value for_host for_cond1 for_cond2
769	var=`echo $zeile \| cut -d" " -f1`
770	value=`echo $zeile \| cut -d" " -s -f2`
771	for_host=`echo $zeile \| cut -d" " -s -f3`
772	for_cond1=`echo $zeile \| cut -d" " -s -f4`
773	for_cond2=`echo $zeile \| cut -d" " -s -f5`
774
775	if [[ "$for_host" = "" \|\| ( "$for_host" = $host && "$for_cond1" = "$cond1" && "$for_cond2" = "$cond2" ) \|\| $(echo "$input_list$output_list"\|grep -c "$for_host") != 0 ]]
776	then
777
778	# BEI COMPILER- CPP- ODER LINKEROPTIONEN EVTL ":" DURCH " "
779	# ERSETZEN. "::" WIRD DURCH ":" ERSETZT.
780	value=`echo $value \| sed 's/::/%DUM%/g' \| sed 's/:/ /g' \| sed 's/%DUM%/:/g'`
781
782
783	# ENVIRONMENT-VARIABLE WIRD WERT AUS KONFIGURATIONSDATEI
784	# ZUGEWIESEN, WENN SIE SELBST NOCH KEINEN WERT UEBER DIE
785	# ENTSPRECHENDE SCRIPT-OPTION ERHALTEN HAT. SOLCHE
786	# VARIABLEN HAETTEN DANN DEN WERT "" ODER IM INTEGER-FALL DEN
787	# WERT 0. ALLGEMEINE REGEL ALSO: SCRIPT-OPTION GEHT UEBER
788	# KONFIGURATIONSDATEI
789	if [[ "$(eval echo \$$var)" = "" \|\| "$(eval echo \$$var)" = "0" ]]
790	then
791	eval $var=\$value
792
793	# EVTL. BILDSCHIRMAUSGABEN DER ENVIRONMENT-VARIABLEN
794	if [[ $do_trace = true ]]
795	then
796	printf "\n*** ENVIRONMENT-VARIABLE $var = $value"
797	fi
798	fi
799
800	# WENN ENVIRONMENT-VARIABLE HOST VEREINBART, DANN SOFORT AUSWERTEN
801	# WERT VON do-remote WIRD BEI DATEIVERBINDUNGEN BENOETIGT
802	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
803	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
804	if [[ $var = host ]]
805	then
806	if [[ -n $host && "$host" != $localhost ]]
807	then
808	do_batch=true
809	do_remote=true
810	case $host in
811	(ibm\|ibms\|ibmy\|lcsgib\|lcsgih\|lctit\|nech\|necriam\|unics\|lcxt4) true;;
812	(*) printf "\n +++ sorry: execution of batch jobs on remote host \"$host\""
813	printf "\n is not available"
814	locat=nqs; exit;;
815	esac
816	else
817	host=$localhost
818	fi
819	fi
820
821	# VOM BENUTZER DEFINIERTE ENVIRONMENT VARIABLEN MUESSEN PRINZIPIELL
822	# EXPORTIERT WERDEN, DA SIE VIELLEICHT IN WEITER UNTEN AUFZURUFEN-
823	# DEN PROGRAMMEN BENOETIGT WERDEN
824	export $var
825	fi
826
827
828
829
830	elif [[ "$(echo $zeile \| cut -c1-3)" = "EC:" ]]
831	then
832
833	# ZEILE DEFINIERT ERROR-KOMMANDO
834	(( iec = iec + 1 ))
835	zeile=$(echo $zeile \| cut -c4-)
836	err_command[$iec]="$zeile"
837
838	elif [[ "$(echo $zeile \| cut -c1-3)" = "IC:" ]]
839	then
840
841	# ZEILE DEFINIERT INPUT-KOMMANDO
842	(( iic = iic + 1 ))
843	zeile=$(echo $zeile \| cut -c4-)
844	in_command[$iic]="$zeile"
845
846	elif [[ "$(echo $zeile \| cut -c1-3)" = "OC:" ]]
847	then
848
849	# ZEILE DEFINIERT OUTPUT-KOMMANDO
850	(( ioc = ioc + 1 ))
851	zeile=$(echo $zeile \| cut -c4-)
852	out_command[$ioc]="$zeile"
853
854	else
855
856	# ZEILE DEFINIERT DATEIVERBINDUNG. EINLESEN DER DATEIEIGENSCHAFTEN
857	# s2a: in/out - Feld
858	# s2b: loc - Feld (optional)
859	# s2c: tr/ar - Feld (optional)
860	# echo $zeile \| cut -d" " -f1-2 \| read s1 s2
861	s1=`echo $zeile \| cut -d" " -f1`
862	s2=`echo $zeile \| cut -d" " -s -f2`
863	s2a=$(echo $s2 \| cut -d":" -f1)
864	if [[ $(echo $s2 \| grep -c ":") = 0 ]]
865	then
866	s2b=""
867	s2c=""
868	else
869	# echo $s2 \| cut -d":" -f2-3 \| sed 's/:/ /g' \| read s2b s2c
870	s2b=`echo $s2 \| cut -d":" -f2 \| sed 's/:/ /g'`
871	s2c=`echo $s2 \| cut -d":" -s -f3 \| sed 's/:/ /g'`
872	fi
873	# echo $zeile \| cut -d" " -f3-6 \| read s3 s4 s5 s6
874	s3=`echo $zeile \| cut -d" " -f3`
875	s4=`echo $zeile \| cut -d" " -s -f4`
876	s5=`echo $zeile \| cut -d" " -s -f5`
877	s6=`echo $zeile \| cut -d" " -s -f6`
878
879
880	# ABSPEICHERN DER DATEIVERBINDUNG, FALLS IN INPUT- ODER OUTPUT-LIST
881	# VERMERKT. VARIABLE S3 KANN AUCH LISTE ENTHALTEN (FELDTRENNER ":")
882	# DATEIVERBINDUNG WIRD DANN NICHT ABGESPEICHERT UND GEPRUEFT, WENN
883	# PROGRAMMLAUF AUF REMOTE-MASCHINE ERFOLGT UND DATEI NUR LOKAL VOR-
884	# HANDEN SEIN MUSS (D.H. s2b = loc)
885	IFSALT="$IFS"; IFS="$IFS:"
886	if [[ "$s2a" = in && ! ( $do_remote = true && ( "$s2b" = loc \|\| "$s2b" = locopt ) ) ]]
887	then
888	found=false
889	for actual in $input_list
890	do
891	for formal in $s3
892	do
893	[[ $actual = $formal \|\| "$formal" = "-" ]] && found=true
894	done
895	done
896	if [[ $found = true ]]
897	then
898	(( iin = iin + 1 ))
899	localin[$iin]=$s1; transin[$iin]=$s2b; actionin[$iin]=$s2c;
900	typein[$iin]=$s3; pathin[$iin]=$s4; endin[$iin]=$s5;
901	extin[$iin]=$s6
902	fi
903	elif [[ "$s2a" = out && ! ( $do_remote = true && "$s2b" = loc ) ]]
904	then
905	found=false
906	for actual in $output_list
907	do
908	for formal in $s3
909	do
910	[[ $actual = $formal \|\| "$formal" = "-" ]] && found=true
911	done
912	done
913	if [[ $found = true ]]
914	then
915	(( iout = iout + 1 ))
916	localout[$iout]=$s1; actionout[$iout]=$s2c; typeout[$iout]=$s3;
917	pathout[$iout]=$s4; endout[$iout]=$s5; extout[$iout]=$s6
918	fi
919	elif [[ "$s2a" != in && "$s2a" != out ]]
920	then
921	printf "\n +++ I/O-attribute in configuration file $config_file has the invalid"
922	printf "\n value \"$s2\". Only \"in\" and \"out\" are allowed!"
923	locat=connect; exit
924	fi
925	IFS="$IFSALT"
926	fi
927	done < $config_file
928
929	else
930
931
932	# INTERPRETATION DER KONFIGURATIONSDATEI MITTELS FORTRAN 90 - PROGRAMM
933	[[ $silent = false ]] && printf "..."
934	export cond1 cond2 config_file do_remote do_trace input_list localhost output_list
935	export interpreted_config_file=.icf.$RANDOM
936
937
938
939	# ENVIRONMENT-VARIABLEN FUER INTERPRET_CONFIG UEBER NAMELIST_DATEI ZUR
940	# VERFUEGUNG STELLEN
941	cat > .mrun_environment << %%END%%
942	&mrun_environment cond1 = '$cond1', cond2 = '$cond2',
943	config_file = '$config_file', do_remote = '$do_remote',
944	do_trace = '$do_trace', host = '$host',
945	input_list = '$input_list', icf = '$interpreted_config_file',
946	localhost = '$localhost', output_list = '$output_list' /
947
948	%%END%%
949
950	# WERTE VON MRUN-OPTIONEN SICHERN UND DAMIT GEGEBENENFALLS SPAETER DIE
951	# IN DER KONFIGURAIONSDATEI ANGEGEBENEN WERTE UEBERSTEUERN
952	mrun_memory=$memory
953	mrun_group_number=$group_number
954	mrun_cpumax=$cpumax
955	mrun_numprocs=$numprocs
956
957	if [[ $localhost_realname = "sx-fep" ]]
958	then
959	/home/COAR/NC/raasch/pub/interpret_config_necriam.x
960	else
961	interpret_config.x
962	fi
963	rm .mrun_environment
964
965
966	# AUSFUEHRUNG DER GENERIERTEN SHELL-KOMMANDOS IN DIESER SHELL
967	chmod u+x $interpreted_config_file
968	export PATH=$PATH:.
969	. $interpreted_config_file
970	rm $interpreted_config_file
971
972
973	# OPTIONSWERTE UEBERSTEUERN KONFIGURATIONSDATEI
974	[[ $mrun_memory != 0 ]] && memory=$mrun_memory
975	[[ "$mrun_group_number" != "none" ]] && group_number=$mrun_group_number
976	[[ $mrun_cpumax != 0 ]] && cpumax=$mrun_cpumax
977	[[ "$mrun_numprocs" != "" ]] && numprocs=$mrun_numprocs
978
979	fi
980
981
982	# QUELLTEXTVERZEICHNIS AUF LOKALER MASCHINE AUS KONFIGURATIONSDATEI
983	# BESTIMMEN (WUERDE SONST EVTL. DAS VERZEICHNIS DES JEWEILS UNTER -h
984	# ANGEGEBENEN REMOTE-RECHNERS SEIN)
985	# BEI BATCH-JOBS SIND DIE ZU UEBERSETZENDEN PROGRAMMTEILE SCHON KOMPLETT
986	if [[ "$SOURCES_COMPLETE" = "" ]]
987	then
988
989	# ZUERST PRUEFEN, OB EIN GLOBALER QUELLTEXTPFAD FUER ALLE RECHNER
990	# VEREINBART WURDE
991	source_path=""
992	line=""
993	grep "%source_path" $config_file > tmp_mrun
994	while read line
995	do
996	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
997	then
998	if [[ "$(echo $line \| cut -d" " -f3)" = "" ]]
999	then
1000	global_source_path=`echo $line \| cut -d" " -f2`
1001	fi
1002	fi
1003	done < tmp_mrun
1004
1005	line=""
1006	found=false
1007	grep " $localhost" $config_file \| grep "%source_path" > tmp_mrun
1008	while read line
1009	do
1010	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
1011	then
1012	if [[ $found = true ]]
1013	then
1014	printf "\n\n +++ more than one source path found in configuration file"
1015	printf "\n for local host \"$localhost\" "
1016	locat=source_path; exit
1017	fi
1018	source_path=`echo $line \| cut -d" " -f2`
1019	found=true
1020	fi
1021	done < tmp_mrun
1022	rm tmp_mrun
1023
1024	if [[ "$source_path" = "" ]]
1025	then
1026	if [[ "$global_source_path" != "" ]]
1027	then
1028	source_path=$global_source_path
1029	else
1030	printf "\n\n +++ no source path found in configuration file"
1031	printf "\n for local host \"$localhost\" "
1032	locat=source_path; exit
1033	fi
1034	fi
1035	eval source_path=$source_path
1036
1037	if [[ ! -d $source_path ]]
1038	then
1039	printf "\n\n +++ source path \"$source_path\" on local host"
1040	printf "\n \"$localhost\" does not exist"
1041	locat=source_path; exit
1042	fi
1043
1044	fi
1045
1046
1047	# GLOBALE REVISIONSNUMMER ERMITTELN (FORTSETZUNGSLAEUFEN WIRD DIESE
1048	# DURCH OPTION -G MITGETEILT)
1049	if [[ "$global_revision" = "" ]]
1050	then
1051	global_revision=`svnversion $source_path 2>/dev/null`
1052	global_revision="Rev: $global_revision"
1053	fi
1054
1055
1056	# NOCHMAL PRUEFEN, OB AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL
1057	# (HOST KANN IN KONFIGURATIONSDATEI ANDERS FESTGELEGT WORDEN SEIN)
1058	# WERT VON do_remote WIRD FUER DATEIVERBINDUNGEN BENOETIGT.
1059	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
1060	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
1061	if [[ -n $host && "$host" != $localhost ]]
1062	then
1063	do_batch=true
1064	do_remote=true
1065	case $host in
1066	(ibm\|ibmb\|ibmh\|ibms\|ibmy\|lcsgib\|lcsgih\|lctit\|nech\|necriam\|unics\|lcxt4) true;;
1067	(*) printf "\n"
1068	printf "\n +++ sorry: execution of batch jobs on remote host \"$host\""
1069	printf "\n is not available"
1070	locat=nqs; (( iec = 0 )); exit;;
1071	esac
1072	else
1073	host=$localhost
1074	fi
1075
1076
1077	# PRUEFUNG EINIGER PROZESSORZAHLANGABEN BEI RECHNUNGEN AUF PARALLELRECHNERN
1078	if [[ "$cond1" = parallel \|\| "$cond2" = parallel ]]
1079	then
1080
1081	# PRUEFEN, OB DIE ANZAHL DER ZU VERWENDENDEN PES ANGEGEBEN WURDE
1082	if [[ ! -n $numprocs ]]
1083	then
1084	printf "\n"
1085	printf "\n +++ option \"-K parallel\" requires additional specification"
1086	printf "\n of the number of processors to be used by"
1087	printf "\n mrun-option \"-X\" or by environment-variable"
1088	printf "\n \"numprocs\" in the configuration file"
1089	locat=numprocs; (( iec = 0 )); exit
1090	fi
1091
1092	# PRUEFEN, OB DIE PROZESSORANZAHL PRO KNOTEN ANGEGEBEN WURDE (GGF.
1093	# DEFAULT-WERT SETZEN) UND OB SIE EIN GANZZAHLIGER TEILER DER
1094	# GESAMTPROZESSORANZAHL IST
1095	if [[ $host = nech \|\| $host = necriam \|\| $host = ibmh \|\| $host = ibmb \|\| $host = ibms ]]
1096	then
1097	[[ "$tasks_per_node" = "" ]] && tasks_per_node=6
1098	(( ival = $tasks_per_node ))
1099	(( pes = numprocs ))
1100	# if [[ $(echo $package_list \| grep -c dvrp_graphics+1PE) = 1 ]]
1101	# then
1102	# (( pes = pes - 1 ))
1103	# fi
1104	(( ii = pes / ival ))
1105	if (( pes - ii * ival > 0 ))
1106	then
1107	printf "\n"
1108	printf "\n +++ tasks per node (option \"-T\") must be an integral"
1109	printf "\n divisor of the total number of processors (option \"-X\")"
1110	printf "\n values of this mrun-call: \"-T $tasks_per_node\" \"-X $numprocs\""
1111	locat=tasks_per_node; (( iec = 0 )); exit
1112	fi
1113	fi
1114
1115	# IBMY HAT NUR EINEN KNOTEN
1116	if [[ $host = ibmy ]]
1117	then
1118	if [[ "$tasks_per_node" != "" && "$tasks_per_node" != "$numprocs" ]]
1119	then
1120	printf "\n"
1121	printf "\n +++ on ibmy, tasks per node (option \"-T\") must be equal to the"
1122	printf "\n total number of processors (option \"-X\")"
1123	printf "\n values of this mrun-call: \"-T $tasks_per_node\" \"-X $numprocs\""
1124	locat=tasks_per_node; (( iec = 0 )); exit
1125	fi
1126	fi
1127
1128	# FALLS OPENMP PARALLELISIERUNG VERWENDET WERDEN SOLL, ANZAHL VON THREADS
1129	# SETZEN UND ZAHL DER TASKS PRO KNOTEN AUF 1 SETZEN
1130	if [[ $use_openmp = true ]]
1131	then
1132	threads_per_task=$tasks_per_node
1133	tasks_per_node=1
1134	fi
1135	OOPT="-O $threads_per_task"
1136	TOPT="-T $tasks_per_node"
1137
1138	# GESAMTZAHL DER KNOTEN BESTIMMEN
1139	if [[ "$tasks_per_node" != "" ]]
1140	then
1141	(( nodes = numprocs / ( tasks_per_node * threads_per_task ) ))
1142	fi
1143
1144	# PRUEFEN, OB NODE USAGE EINEN ERLAUBTEN WERT HAT BZW. DEN DEFAULT
1145	# SETZEN
1146	if [[ $node_usage = default ]]
1147	then
1148	if [[ $host = ibms ]]
1149	then
1150	node_usage=shared
1151	elif [[ $host = lctit ]]
1152	then
1153	node_usage=RAM64GB
1154	elif [[ $(echo $host \| cut -c1-5) = lcsgi ]]
1155	then
1156	node_usage=singlejob
1157	else
1158	node_usage=not_shared
1159	fi
1160	fi
1161
1162	if [[ $node_usage != shared && $node_usage != not_shared && $node_usage != singlejob && "$(echo $node_usage \| cut -c1-3)" != "sla" && $node_usage != RAM64GB ]]
1163	then
1164	printf "\n"
1165	printf "\n +++ node usage (option \"-n\") is only allowed to be set"
1166	printf "\n \"shared\" or \"not_shared\""
1167	locat=tasks_per_node; (( iec = 0 )); exit
1168	fi
1169
1170	fi
1171
1172	# PRUEFEN, OB HOSTFILE EXISTIERT
1173	if [[ -n $hostfile ]]
1174	then
1175	if [[ ! -f $hostfile ]]
1176	then
1177	printf "\n"
1178	printf "\n +++ hostfile \"$hostfile\" does not exist"
1179	locat=hostfile; exit
1180	fi
1181	fi
1182
1183	# PRUEFEN, OB RHOSTS DATEI EXISTIERT. GEGEBENENFALLS ANLEGEN BZW. ERWEITERN
1184	if [[ $host = ibmy && $do_remote = false ]]
1185	then
1186	if [[ ! -f $HOME/.rhosts ]]
1187	then
1188	echo "gfdl5.yonsei.ac.kr" > $HOME/.rhosts
1189	printf "\n\n *** file:"
1190	printf "\n $HOME/.rhosts"
1191	printf "\n was created\n"
1192	fi
1193	if [[ $(grep -c gfdl5.yonsei.ac.kr $HOME/.rhosts) = 0 ]]
1194	then
1195	echo "gfdl5.yonsei.ac.kr" >> $HOME/.rhosts
1196	printf "\n\n *** file:"
1197	printf "\n $HOME/.rhosts"
1198	printf "\n was extended by the name of the current host\n"
1199	fi
1200	fi
1201
1202
1203
1204	# FALLS NICHT VORGEGEBEN, DEFAULT-QUEUE AUF DER ZIELMASCHINE FESTLEGEN
1205	if [[ $queue = none ]]
1206	then
1207	case $host in
1208	(ibmb) if [[ $node_usage = shared ]]
1209	then
1210	queue=cshare
1211	else
1212	queue=csolo
1213	fi;;
1214	(ibmh) queue=no_class;;
1215	(ibmy) queue=parallel;;
1216	(lcsgib) queue=bigq;;
1217	(lcsgih) queue=bigq;;
1218	(lctit) queue=RAM64GB;;
1219	(nech) queue=none;;
1220	(necriam) queue=SP;;
1221	(unics) queue=unics;;
1222	esac
1223	fi
1224
1225
1226	# VOLLSTAENDIGE DATEINAMEN DER INPUT-FILES BILDEN,
1227	# INPUT-DATEIEN AUF VORHANDENSEIN PRUEFEN UND EVTL. HOECHSTE ZYKLUSNUMMER
1228	# ERMITTELN
1229	(( i = 0 ))
1230	while (( i < iin ))
1231	do
1232	(( i = i + 1 ))
1233	(( maxcycle = 0 ))
1234
1235	# NAMENSBILDUNG (EVTL. IST FESTER DATEINAME VORGEGEBEN)
1236	if [[ "${actionin[$i]}" = di ]]
1237	then
1238	remotepathin[$i]=${pathin[$i]}/${endin[$i]} # REMOTE-PFAD ERST AUF
1239	# REM-MASCHINE AUSWERTEN
1240	eval filename=${pathin[$i]}/${endin[$i]}
1241	else
1242	remotepathin[$i]=${pathin[$i]}/${afname}${endin[$i]} # REMOTE-PFAD ERST AUF
1243	# REM-MASCHINE AUSWERTEN
1244	eval filename=${pathin[$i]}/${afname}${endin[$i]}
1245	fi
1246
1247	# PRUEFEN AUF VORHANDENSEIN
1248	if [[ $(ls $filename* 2>&1 \| grep -c "not found") = 1 \|\| \
1249	$(ls $filename* 2>&1 \| grep -c "No such file") = 1 \|\| \
1250	$(ls $filename* 2>&1 \| grep -c "does not exist") = 1 ]]
1251	then
1252	# DATEIEN MIT EXTENSION (Z.B. NC) MUESSEN NICHT ZWINGEND VORHANDEN
1253	# SEIN, DESHALB IN SOLCHEN FAELLEN KEIN ABBRUCH. DIES IST NUR EINE
1254	# VORUEBERGEHENDE LOESUNG (OKT 05). NICHT ZWINGEND BENOETIGTE
1255	# EINGABEDATEIEN SOLLTEN EINE SPEZIELLE OPTION IN DER DATEI-
1256	# VERBINDUNGSANWEISUNG BEKOMMEN (Z.B. inopt?)
1257	if [[ "${transin[$i]}" != "locopt" ]]
1258	then
1259	printf "\n\n +++ INPUT-file: "
1260	if [[ "${extin[$i]}" = "" ]]
1261	then
1262	printf "\n $filename"
1263	else
1264	printf "\n $filename.${extin[$i]}"
1265	fi
1266	printf "\n does not exist\n"
1267	locat=input; exit
1268	else
1269	transin[$i]="unavailable"
1270	fi
1271	else
1272
1273	# ZYKLUSNUMMER FESTSTELLEN
1274	ls -1 -d $filename > filelist 2>/dev/null
1275	ls -1 -d $filename.* >> filelist 2>/dev/null
1276	while read zeile
1277	do
1278	cycle=$(print $zeile \| cut -f2 -d".")
1279	if [[ "$cycle" = "$zeile" ]]
1280	then
1281	(( icycle = 0 ))
1282	elif [[ "$cycle" = "${extin[$i]}" ]]
1283	then
1284	(( icycle = 0 ))
1285	else
1286	(( icycle = $cycle ))
1287	fi
1288	if (( icycle > maxcycle ))
1289	then
1290	(( maxcycle = icycle ))
1291	file_to_be_used=$zeile
1292	fi
1293	done <filelist
1294	rm filelist
1295
1296	# EVTL. ZYKLUSNUMMER AN DATEINAMEN ANFUEGEN
1297	if (( maxcycle > 0 ))
1298	then
1299	if [[ "${extin[$i]}" != " " && "${extin[$i]}" != "" ]]
1300	then
1301	filename=${filename}.$maxcycle.${extin[$i]}
1302	else
1303	filename=${filename}.$maxcycle
1304	fi
1305	else
1306	if [[ "${extin[$i]}" != " " && "${extin[$i]}" != "" ]]
1307	then
1308	filename=${filename}.${extin[$i]}
1309	fi
1310	fi
1311
1312	# DATEINAMEN OHNE PFAD ABER MIT ZYKLUSNUMMER ABSPEICHERN,
1313	# DA SPAETER BEI RUECKSPEICHERN VOM ARCHIVSYSTEM EVTL. BENOETIGT
1314	absnamein[$i]=$filename
1315	if (( maxcycle > 0 ))
1316	then
1317	if [[ "${actionin[$i]}" = di ]]
1318	then
1319	frelin[$i]=${endin[$i]}.$maxcycle
1320	else
1321	frelin[$i]=${afname}${endin[$i]}.$maxcycle
1322	fi
1323	else
1324	if [[ "${actionin[$i]}" = di ]]
1325	then
1326	frelin[$i]=${endin[$i]}
1327	else
1328	frelin[$i]=${afname}${endin[$i]}
1329	fi
1330	fi
1331
1332	fi
1333	done
1334
1335
1336	# VOLLSTAENDIGE DATEINAMEN (OHNE $ ODER ~) DER OUTPUT-FILES BILDEN,
1337	# OUTPUT-DATEIEN AUF VORHANDENSEIN PRUEFEN UND EVTL. HOECHSTE ZYKLUSNUMMER
1338	# ERMITTELN ODER, FALLS NICHT VORHANDEN, PRUEFEN, OB SIE SICH ANLEGEN LASSEN
1339	# DIESE AKTIONEN FINDEN NICHT STATT, WENN PROGRAMM AUF REMOTE-MASCHINE
1340	# RECHNET UND DATEI ANSCHLIESSEND TRANSFERIERT WERDEN SOLL!
1341	(( i = 0 ))
1342	while (( i < iout ))
1343	do
1344	(( i = i + 1 ))
1345	if [[ ! ( $fromhost != $localhost && ( "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = tra \|\| "${actionout[$i]}" = trpe ) ) ]]
1346	then
1347	if [[ "${actionout[$i]}" = tr ]]
1348	then
1349	actionout[$i]=""
1350	elif [[ "${actionout[$i]}" = trpe ]]
1351	then
1352	actionout[$i]=pe
1353	elif [[ "${actionout[$i]}" = tra ]]
1354	then
1355	actionout[$i]=a
1356	fi
1357	(( maxcycle = 0 ))
1358	eval filename=${pathout[$i]}/${fname}${endout[$i]}
1359	eval catalogname=${pathout[$i]}
1360	if [[ $(ls $filename* 2>&1 \| grep -c "not found") = 1 \|\| \
1361	$(ls $filename* 2>&1 \| grep -c "No such file") = 1 \|\| \
1362	$(ls $filename* 2>&1 \| grep -c "does not exist") = 1 ]]
1363	then
1364
1365	# OUTPUT-DATEI NICHT VORHANDEN. PRUEFEN, OB ANLEGEN MOEGLICH.
1366	if cat /dev/null > $filename
1367	then
1368	rm $filename
1369	else
1370
1371	# PRUEFEN, OB KATALOG VORHANDEN UND EVTL. DIESEN ANLEGEN
1372	if [[ ! -d $catalogname ]]
1373	then
1374	if mkdir -p $catalogname
1375	then
1376	printf "\n\n *** directory:"
1377	printf "\n $catalogname"
1378	printf "\n was created\n"
1379	else
1380	printf "\n\n +++ OUTPUT-file:"
1381	printf "\n $filename"
1382	printf "\n cannot be created, because directory does not exist"
1383	printf "\n and cannot be created either"
1384	printf "\n"
1385	locat=output ; exit
1386	fi 2>/dev/null
1387	else
1388	printf "\n\n +++ OUTPUT-file:"
1389	printf "\n $filename"
1390	printf "\n cannot be created, although directory exists"
1391	printf "\n"
1392	locat=output ; exit
1393	fi
1394	fi 2>/dev/null
1395	else
1396
1397	# ZYKLUSNUMMER FESTSTELLEN
1398	ls -1 -d $filename > filelist 2>/dev/null
1399	ls -1 -d $filename.* >> filelist 2>/dev/null
1400	while read zeile
1401	do
1402	cycle=$(print $zeile \| cut -f2 -d".")
1403	if [[ "$cycle" = "$zeile" \|\| "$cycle" = ${extout[$i]} ]]
1404	then
1405	(( icycle = 1 ))
1406	else
1407	(( icycle = $cycle + 1 ))
1408	fi
1409	if (( icycle > maxcycle ))
1410	then
1411	(( maxcycle = icycle ))
1412	fi
1413	done <filelist
1414	rm filelist
1415	fi
1416
1417	# EVTL. ZYKLUSNUMMER AN DATEINAMEN ANFUEGEN UND PRUEFEN, OB SICH
1418	# DATEI AUCH WIRKLICH ANLEGEN LAESST. IM APPEND-FALL MUSS AN DEN
1419	# HOECHSTEN VORHANDENEN ZYKLUS-ANGEHAENGT WERDEN. ANLAGEPRUEFUNG
1420	# IST DANN NATUERLICH NICHT ZULAESSIG BZW. MOEGLICH
1421	if [[ "${actionout[$i]}" != a ]]
1422	then
1423	if (( maxcycle > 0 ))
1424	then
1425	filename=${filename}.$maxcycle
1426	if cat /dev/null > $filename
1427	then
1428	rm $filename
1429	else
1430	printf "\n +++ OUTPUT-file:"
1431	printf "\n $filename"
1432	printf "\n cannot be created"
1433	locat=output ; exit
1434	fi
1435	fi
1436	else
1437	(( maxcycle = maxcycle - 1 ))
1438	if (( maxcycle > 0 ))
1439	then
1440	filename=${filename}.$maxcycle
1441	fi
1442	fi
1443
1444	# DATEINAMEN OHNE PFAD ABER MIT ZYKLUSNUMMER ABSPEICHERN,
1445	# DA SPAETER BEI ABLAGE AUF ARCHIVSYSTEM BZW. FUER
1446	# DATEI OUTPUT_FILE_CONNECTIONS EVTL. BENOETIGT
1447	pathout[$i]=$filename
1448	if (( maxcycle > 0 ))
1449	then
1450	frelout[$i]=${fname}${endout[$i]}.$maxcycle
1451	else
1452	frelout[$i]=${fname}${endout[$i]}
1453	fi
1454
1455	fi
1456	done
1457
1458
1459	# DAS DVR-PAKET ERFORDERT EINE ENTSPRECHENDE BIBLIOTHEK
1460	if [[ $(echo $package_list \| grep -c dvrp_graphics) != 0 ]]
1461	then
1462	if [[ "$dvr_inc" = "" ]]
1463	then
1464	printf "\n\n +++ no value for \"dvr_inc\" given in configuration file"
1465	printf "\n This is required for the dvrp_graphics package.\n"
1466	locat=dvr; exit
1467	fi
1468	if [[ "$dvr_lib" = "" ]]
1469	then
1470	printf "\n\n +++ no value for \"dvr_lib\" given in configuration file"
1471	printf "\n This is required for the dvrp_graphics package.\n"
1472	locat=dvr; exit
1473	fi
1474	fi
1475
1476
1477	# PRUEFEN, OB ENTWEDER HAUPTPROGRAMM ODER NUR EIN AUSFUEHRBARES
1478	# PROGRAMM VEREINBART WURDE (IN DIESEM FALL BRAUCHT IM WEITEREN NICHT
1479	# UEBERSETZT ZU WERDEN)
1480	if [[ "$mainprog" = "" && "$executable" = "" ]]
1481	then
1482	printf "\n +++ neither main program nor executable defined"
1483	locat=source; exit
1484	elif [[ "$mainprog" != "" && "$executable" != "" ]]
1485	then
1486	printf "\n +++ main program as well as executable defined"
1487	locat=source; exit
1488	elif [[ "$mainprog" = "" && "$executable" != "" ]]
1489	then
1490	do_compile=false
1491	fi
1492
1493
1494	# SOURCE-VERZEICHNIS ZUM AUFSAMMELN DER ZU UEBERSETZENDEN PROGRAMMTEILE
1495	# ERZEUGEN. HIERHIN WERDEN SPAETER IM FALL VON BATCH-JOBS AUCH DAS MRUN-
1496	# SCRIPTS SOWIE DIE KONFIGURATIONSDATEI KOPIERT
1497	if [[ $restart_run != true && "$SOURCES_COMPLETE" = "" ]]
1498	then
1499	rm -rf SOURCES_FOR_RUN_$fname
1500	mkdir SOURCES_FOR_RUN_$fname
1501	fi
1502
1503
1504	# ALLE ZU UEBERSETZENDEN PROGRAMMTEILE ZUSAMMENSAMMELN
1505	# BEI BATCH-JOBS IST DIES NICHT NOETIG, WEIL DIE PROGRAMMTEILE BEREITS DURCH
1506	# DEN MRUN-AUFRUF ERMITTELT SIND, DER DEN BATCH-JOB GENERIERT HAT, UND
1507	# IM VERZEICHNIS SOURCES_FOR_RUN_... ABGELEGT SIND
1508	if [[ $do_compile = true && "$SOURCES_COMPLETE" = "" ]]
1509	then
1510
1511	[[ "$source_list" = LM ]] && source_list=LOCALLY_MODIFIED
1512	[[ "$source_list" = WP ]] && source_list=WRITE_PERMIT
1513
1514
1515	# EVTL. ZU UEBERSETZENDE PROGRAMMTEILE DADURCH BESTIMMEN, DASS GEPRUEFT
1516	# WIRD, WELCHE DATEIEN WRITE-PERMIT BESITZEN (DATEIEN SOLLTEN DESHALB
1517	# UNTER RCS-KONTROLLE STEHEN). MIT DER VARIABLEN EXCLUDE KOENNEN
1518	# BESTIMMTE DATEIEN GRUNDSAETZLICH VON DER UEBERSETZUNG AUSGESCHLOSSEN
1519	# WERDEN. DIES IST NUR BEI MANUELLEM START VON MRUN DURCH DEN BENUTZER
1520	# MOEGLICH, DA BEI AUTOMATISCHEN RESTARTS TEST DURCH DIE TATSAECHLICH
1521	# ZU UBERSETZENDEN DATEIEN ERSETZT IST.
1522	# ALLE ERMITTELTEN DATEIEN WERDEN IM VERZEICHNIS SOURCES_FOR_RUN_...
1523	# GESAMMELT
1524	if [[ "$source_list" = WRITE_PERMIT ]]
1525	then
1526
1527	source_list=""
1528	cd $source_path
1529
1530
1531	# ALLE MOEGLICHEN QUELLCODEDATEIEN AUFLISTEN
1532	Names=$(ls -1 *.f90 2>&1)
1533	[[ $(echo $Names \| grep -c '*.f90') = 0 ]] && Filenames="$Names"
1534	Names=$(ls -1 *.F90 2>&1)
1535	[[ $(echo $Names \| grep -c '*.F90') = 0 ]] && Filenames="$Filenames $Names"
1536	Names=$(ls -1 *.F 2>&1)
1537	[[ $(echo $Names \| grep -c '*.F') = 0 ]] && Filenames="$Filenames $Names"
1538	Names=$(ls -1 *.f 2>&1)
1539	[[ $(echo $Names \| grep -c '*.f') = 0 ]] && Filenames="$Filenames $Names"
1540	Names=$(ls -1 *.c 2>&1)
1541	[[ $(echo $Names \| grep -c '*.c') = 0 ]] && Filenames="$Filenames $Names"
1542
1543
1544	# DATEIEN MIT WRITE-PERMIT NACH SOURCES_FOR_RUN_... KOPIEREN
1545	for dateiname in $Filenames
1546	do
1547	if [[ -w $dateiname ]]
1548	then
1549	if [[ "$exclude" = "" \|\| $(echo $exclude \| grep -c $dateiname) = 0 ]]
1550	then
1551	cp $dateiname $working_directory/SOURCES_FOR_RUN_$fname
1552	source_list=$source_list"$dateiname "
1553	fi
1554	fi
1555	done
1556
1557	cd - > /dev/null
1558
1559
1560	elif [[ "$source_list" = LOCALLY_MODIFIED ]]
1561	then
1562
1563	# MODIFIZIERTE DATEIEN DER SVN-ARBEITSKOPIE BESTIMMEN
1564	source_list=""
1565	cd $source_path
1566
1567
1568	# PRUEFEN, OB VERZEICHNIS UEBERHAUPT UNTER SVN-KONTROLLE STEHT
1569	if [[ ! -d .svn ]]
1570	then
1571	printf "\n\n +++ source directory"
1572	printf "\n \"$source_path\" "
1573	printf "\n is not under control of \"subversion\"."
1574	printf "\n Please do not use mrun-option \"-s LOCALLY_MODIFIED\"\n"
1575	fi
1576
1577
1578	# ALLE MODIFIZIERTEN QUELLCODEDATEIEN AUFLISTEN
1579	Filenames=""
1580	svn status > tmp_mrun
1581	while read line
1582	do
1583	firstc=`echo $line \| cut -c1`
1584	if [[ $firstc = M \|\| $firstc = "?" ]]
1585	then
1586	Name=`echo "$line" \| cut -c8-`
1587	extension=`echo $Name \| cut -d. -f2`
1588	if [[ "$extension" = f90 \|\| "$extension" = F90 \|\| "$extension" = f \|\| "$extension" = F \|\| "$extension" = c ]]
1589	then
1590	Filenames="$Filenames "$Name
1591	fi
1592	fi
1593	done < tmp_mrun
1594
1595
1596	# DATEIEN NACH SOURCES_FOR_RUN_... KOPIEREN
1597	for dateiname in $Filenames
1598	do
1599	cp $dateiname $working_directory/SOURCES_FOR_RUN_$fname
1600	source_list=$source_list"$dateiname "
1601	done
1602
1603	cd - > /dev/null
1604
1605
1606	# MITTELS OPTION -s ANGEGEBENE DATEIEN NACH SOURCES_FOR_RUN_... KOPIEREN
1607	# BEI AUTOMATISCHEN FORTSETZUNGSLAEUFEN SIND DORT SCHON ALLE DATEIEN
1608	# VORHANDEN
1609	elif [[ "$source_list" != "" && $restart_run != true ]]
1610	then
1611
1612	cd $source_path
1613
1614	for filename in $source_list
1615	do
1616
1617	# QUELLTEXT-DATEI DARF KEINE PFADE BEINHALTEN
1618	if [[ $(print $filename \| grep -c "/") != 0 ]]
1619	then
1620	printf "\n +++ source code file: $filename"
1621	printf "\n must not contain (\"/\") "
1622	locat=source; exit
1623	fi
1624
1625	if [[ ! -f $filename ]]
1626	then
1627	printf "\n +++ source code file: $filename"
1628	printf "\n does not exist"
1629	locat=source; exit
1630	else
1631	cp $filename $working_directory/SOURCES_FOR_RUN_$fname
1632	fi
1633
1634	done
1635
1636	cd - > /dev/null
1637
1638	fi
1639
1640
1641	# PRUEFEN, OB ENTWEDER HAUPTPROGRAMM VORHANDEN UND ES EVTL. IN DER
1642	# LISTE DER ZU UEBERSETZENDEN PROGRAMMTEILE MIT ENTHALTEN IST (WENN
1643	# NICHT, WIRD ES DIESER LISTE HINZUGEFUEGT)
1644	if [[ $restart_run != true ]]
1645	then
1646
1647	if [[ ! -f "$source_path/$mainprog" ]]
1648	then
1649	printf "\n\n +++ main program: $mainprog"
1650	printf "\n does not exist in source directory"
1651	printf "\n \"$source_path\"\n"
1652	locat=source; exit
1653	else
1654	if [[ $(echo $source_list \| grep -c $mainprog) = 0 ]]
1655	then
1656	cp $source_path/$mainprog SOURCES_FOR_RUN_$fname
1657	source_list=${mainprog}" $source_list"
1658	fi
1659	fi
1660	fi
1661
1662
1663	# MAKEFILE AUF VORHANDENSEIN PRUEFEN UND KOPIEREN
1664	# BEI RESTART-LAEUFEN LIEGT ES SCHON IM VERZEICHNIS SOURCES_FOR_RUN...
1665	if [[ "$restart_run" != true ]]
1666	then
1667	[[ "$makefile" = "" ]] && makefile=$source_path/Makefile
1668	if [[ ! -f $makefile ]]
1669	then
1670	printf "\n +++ file \"$makefile\" does not exist"
1671	locat=make; exit
1672	else
1673	cp $makefile SOURCES_FOR_RUN_$fname/Makefile
1674	fi
1675	fi
1676
1677
1678	# DATEIEN AUS ZUSAETZLICHEM QUELLVERZEICHNIS HINZUFUEGEN
1679	if [[ $restart_run != true && "$add_source_path" != "" ]]
1680	then
1681
1682	# GIBT ES DAS VERZEICHNIS UEBERHAUPT?
1683	if [[ ! -d $add_source_path ]]
1684	then
1685	printf "\n\n +++ WARNING: additional source code directory"
1686	printf "\n \"$add_source_path\" "
1687	printf "\n does not exist or is not a directory."
1688	printf "\n No source code will be used from this directory!\n"
1689	add_source_path=""
1690	sleep 3
1691	else
1692
1693	cd $add_source_path
1694	found=false
1695
1696	Names=$(ls -1 *.f90 2>&1)
1697	[[ $(echo $Names \| grep -c '*.f90') = 0 ]] && AddFilenames="$Names"
1698	Names=$(ls -1 *.F90 2>&1)
1699	[[ $(echo $Names \| grep -c '*.F90') = 0 ]] && AddFilenames="$AddFilenames $Names"
1700	Names=$(ls -1 *.F 2>&1)
1701	[[ $(echo $Names \| grep -c '*.F') = 0 ]] && AddFilenames="$AddFilenames $Names"
1702	Names=$(ls -1 *.f 2>&1)
1703	[[ $(echo $Names \| grep -c '*.f') = 0 ]] && AddFilenames="$AddFilenames $Names"
1704	Names=$(ls -1 *.c 2>&1)
1705	[[ $(echo $Names \| grep -c '*.c') = 0 ]] && AddFilenames="$AddFilenames $Names"
1706
1707	cd - > /dev/null
1708	cd SOURCES_FOR_RUN_$fname
1709
1710	# COPY MAKEFILE IF EXISTING
1711	if [[ -f $add_source_path/Makefile ]]
1712	then
1713	printf "\n\n *** user Makefile from directory"
1714	printf "\n \"$add_source_path\" is used \n"
1715	sleep 1
1716	cp $add_source_path/Makefile .
1717	fi
1718
1719	for dateiname in $AddFilenames
1720	do
1721	if [[ -f $dateiname ]]
1722	then
1723	printf "\n +++ source code file \"$dateiname\" found in additional"
1724	printf "\n source code directory \"$add_source_path\" "
1725	printf "\n but was also given with option \"-s\" which means that it should be taken"
1726	printf "\n from directory \"$source_path\"."
1727	locat=source; exit
1728	fi
1729
1730	cp $add_source_path/$dateiname .
1731	source_list="$source_list $dateiname"
1732
1733	# CHECK IF FILE IS CONTAINED IN MAKEFILE
1734	if [[ $(grep -c $dateiname Makefile) = 0 ]]
1735	then
1736	printf "\n\n +++ user file \"$dateiname\" "
1737	printf "\n is not listed in Makefile \n"
1738	locat=source; exit
1739	else
1740
1741	# Default User-Interface von der Liste entfernen, falls Datei
1742	# ein User-Interface enthaelt
1743	# if [[ $( cat $dateiname \| grep -c "END SUBROUTINE user_parin" ) != 0 ]]
1744	# then
1745	# if [[ $dateiname != user_interface.f90 && -f user_interface.f90 ]]
1746	# then
1747	# rm -rf user_interface.f90
1748	# source_list=`echo $source_list \| sed -e 's/user_interface.f90//'`
1749	# printf "\n\n *** default \"user_interface.f90\" removed from the files to be translated"
1750	# printf "\n since a user-interface is found in file"
1751	# printf "\n \"$add_source_path/$dateiname\" \n"
1752	# sleep 3
1753	# else
1754	if [[ $found = false ]]
1755	then
1756	found=true
1757	printf "\n\n *** following user file(s) added to the"
1758	printf " files to be translated:\n "
1759	fi
1760	printf "$dateiname "
1761	sleep 0.5
1762	fi
1763	done
1764	[[ $found = true ]] && printf "\n"
1765	cd - > /dev/null
1766	fi
1767	fi
1768
1769
1770	# ALLE UNTERPROGRAMME, DIE ZU VEREINBARTEN SOFTWAREPAKETEN GEHOEREN,
1771	# DER LISTE DER ZU UEBERSETZENDEN DATEIEN HINZUFUEGEN
1772	if [[ $restart_run != true && -n $package_list ]]
1773	then
1774
1775	cd $source_path
1776
1777	for package in $package_list
1778	do
1779
1780	[[ $package = "dvrp_graphics+1PE" ]] && package=dvrp_graphics
1781
1782	# ERMITTELE ALLE DATEIEN, DIE ZUM PAKET GEHOEREN
1783	# FEHLERMELDUNGEN WERDEN ABGEFANGEN, DA * AUCH VERZEICHNISSNAMEN
1784	# LIEFERT
1785	package_source_list=`grep "defined( __$package " * 2>/dev/null \| cut -f1 -d:`
1786
1787
1788	# FUEGE DIESE DATEIEN DER LISTE DER ZU UEBERSETZENDEN DATEIEN
1789	# HINZU, FALLS SIE NOCH NICHT DAZUGEHOEREN
1790	for source_list_name in $package_source_list
1791	do
1792	if [[ $(echo $source_list \| grep -c $source_list_name) = 0 ]]
1793	then
1794
1795	# NUR DATEIEN MIT GUELTIGEN ENDUNGEN VERWENDEN
1796	ending=`echo $source_list_name \| cut -f2 -d.`
1797	if [[ "$ending" = f90 \|\| "$ending" = F90 \|\| "$ending" = f \|\| "$ending" = F \|\| "$ending" = c ]]
1798	then
1799	cp $source_list_name $working_directory/SOURCES_FOR_RUN_$fname
1800	source_list="$source_list $source_list_name"
1801	fi
1802	fi
1803	done
1804	done
1805
1806	cd - > /dev/null
1807	fi
1808
1809
1810	# MAKEFILE AUF VORHANDENSEIN PRUEFEN UND KOPIEREN
1811	# BEI RESTART-LAEUFEN LIEGT ES SCHON IM VERZEICHNIS SOURCES_FOR_RUN...
1812	# if [[ "$restart_run" != true ]]
1813	# then
1814	# [[ "$makefile" = "" ]] && makefile=$source_path/Makefile
1815	# if [[ ! -f $makefile ]]
1816	# then
1817	# printf "\n +++ file \"$makefile\" does not exist"
1818	# locat=make; exit
1819	# else
1820	# cp $makefile SOURCES_FOR_RUN_$fname/Makefile
1821	# fi
1822	# fi
1823
1824	fi # do_compile=true
1825
1826
1827	# FALLS PROGRAMMTEILE UEBERSETZT WERDEN SOLLEN, FOLGEN JETZT EINIGE
1828	# UEBERPRUEFUNGEN UND DAS SETZEN DER PRAEPROZESSOR-DIREKTIVEN
1829	if [[ $do_compile = true ]]
1830	then
1831
1832	# PRAEPROZESSOR-DIREKTIVEN ZUM SELEKTIVEN AUSWAEHLEN VON CODETEILEN
1833	# ZUSAMMENSETZEN
1834	# DIREKTIVEN ZUM AKTIVIEREN VON RECHNERSPEZIFISCHEM CODE
1835	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1836	then
1837	cpp_options="${cpp_options},-D__ibm=__ibm"
1838	elif [[ $(echo $localhost \| cut -c1-3) = nec ]]
1839	then
1840	cpp_options="$cpp_options -D__nec"
1841	elif [[ $(echo $localhost \| cut -c1-2) = lc ]]
1842	then
1843	cpp_options="$cpp_options -D__lc"
1844	else
1845	cpp_options="$cpp_options -D__$localhost"
1846	fi
1847
1848	# DIREKTIVEN DIE DURCH OPTION -K BESTIMMT WERDEN (Z.B. PARALLEL)
1849	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1850	then
1851	[[ -n $cond1 ]] && cpp_options="${cpp_options},-D__$cond1=__$cond1"
1852	[[ -n $cond2 ]] && cpp_options="${cpp_options},-D__$cond2=__$cond2"
1853	else
1854	[[ -n $cond1 ]] && cpp_options="$cpp_options -D__$cond1"
1855	[[ -n $cond2 ]] && cpp_options="$cpp_options -D__$cond2"
1856	fi
1857
1858	# DIREKTIVEN DIE SOFTWAREPAKETE AKTIVIEREN (OPTION -p)
1859	if [[ -n $package_list ]]
1860	then
1861	for package in $package_list
1862	do
1863	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1864	then
1865	if [[ $package != "dvrp_graphics+1PE" ]]
1866	then
1867	cpp_options="${cpp_options},-D__$package=__$package"
1868	else
1869	cpp_options="${cpp_options},-D__dvrp_graphics=__dvrp_graphics"
1870	export use_seperate_pe_for_dvrp_output=true
1871	fi
1872	else
1873	if [[ $package != "dvrp_graphics+1PE" ]]
1874	then
1875	cpp_options="$cpp_options -D__$package"
1876	else
1877	cpp_options="$cpp_options -D__dvrp_graphics"
1878	export use_seperate_pe_for_dvrp_output=true
1879	fi
1880	fi
1881	done
1882	fi
1883
1884	# DIREKTIVEN DIE DURCH OPTION -D FESTGELEGT SIND
1885	if [[ -n $cpp_opts ]]
1886	then
1887	for popts in $cpp_opts
1888	do
1889	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1890	then
1891	cpp_options="${cpp_options},-D__$popts=__$popts"
1892	else
1893	cpp_options="$cpp_options -D__$popts"
1894	fi
1895	done
1896	fi
1897
1898	else
1899
1900
1901	# BEI LOKALEN RECHNUNGEN PRUEFEN, OB EXECUTABLE VORHANDEN
1902	if [[ $do_remote = false ]]
1903	then
1904	if [[ ! -f $executable ]]
1905	then
1906	printf "\n +++ executable file: $executable"
1907	printf "\n does not exist"
1908	locat=executable; exit
1909	fi
1910	fi
1911	fi
1912
1913
1914	# JOBMODUS FESTSTELLEN
1915	if [[ "$ENVIRONMENT" = BATCH && $localhost != lctit \|\| "$QUEUE" != interactive && $localhost = lctit ]]
1916	then
1917	jobmo=BATCH
1918	else
1919	jobmo=INTERACTIVE
1920	fi
1921
1922
1923	# HOSTSPEZIFISCHE DEFAULT-COMPILER SETZEN, FALLS NICHT BEREITS
1924	# DURCH BENUTZER ANDERWEITIG VEREINBART
1925	if [[ "$compiler_name" = "" ]]
1926	then
1927
1928	printf "\n +++ no compiler specified for \"$host $cond1 $cond2\""
1929	locat=compiler_name; exit
1930
1931	fi
1932
1933
1934	# COMPILER AUF RIAMS NEC UEBERSCHREIBEN
1935	[[ $localhost = necriam ]] && compiler_name=mpif90
1936
1937
1938
1939	# TEMPORAEREN KATALOGNAMEN BESTIMMEN
1940	kennung=$RANDOM
1941	if [[ "$tmp_user_catalog" = "" ]]
1942	then
1943	if [[ $localhost = ibmh ]]
1944	then
1945	tmp_user_catalog=$SCRATCH
1946	elif [[ $localhost = nech ]]
1947	then
1948	tmp_user_catalog=$WRKSHR
1949	else
1950	tmp_user_catalog=/tmp
1951	fi
1952	fi
1953	TEMPDIR=$tmp_user_catalog/${usern}.$kennung
1954
1955
1956	# KATALOGNAMEN FUER ZWISCHENSPEICHERUNG VON FORTSETZUNGSLAUFDATEIEN
1957	# BESTIMMEN
1958	if [[ "$tmp_data_catalog" = "" ]]
1959	then
1960	if [[ $localhost = ibmb ]]
1961	then
1962	tmp_data_catalog=$WORK/mrun_restart_data
1963	elif [[ $localhost = nech ]]
1964	then
1965	tmp_data_catalog=$WRKSHR/mrun_restart_data
1966	else
1967	tmp_data_catalog=/tmp/mrun_restart_data
1968	fi
1969	fi
1970
1971
1972	# EVENTUELL BEI LOKALEN RECHNUNGEN $-ZEICHEN IN ENVIRONMENT-VARIABLEN
1973	# ERSETZEN
1974	if [[ $do_remote = false && $do_compile = true ]]
1975	then
1976	eval fopts=\"$fopts\"
1977	eval lopts=\"$lopts\"
1978	fi
1979
1980
1981
1982	# COMPILE- UND LINK-OPTIONEN BESTIMMEN
1983	fopts="$fopts $netcdf_inc $dvr_inc"
1984	lopts="$lopts $netcdf_lib $dvr_lib"
1985	ROPTS="$ropts"
1986	if [[ ( $(echo $host \| cut -c1-3) = nec \|\| $(echo $host \| cut -c1-3) = ibm \|\| $host = lcsgih \|\| $host = lcsgib \|\| $host = lctit \|\| $host = lcfimm \|\| $host = lcxt4 ) && -n $numprocs ]]
1987	then
1988	XOPT="-X $numprocs"
1989	fi
1990
1991
1992
1993	# PRUEFEN DER CPU-ZEIT. (CPUMAX WIRD ALS ENV-VARIABLE VOM HAUTPRO-
1994	# GRAMM BENOETIGT
1995	done=false
1996	while [[ $done = false ]]
1997	do
1998	cputime=$cpumax
1999	if (( $cputime == 0 ))
2000	then
2001	if [[ $do_batch = true ]]
2002	then
2003	printf "\n +++ cpu-time is undefined"
2004	printf "\n >>> Please type CPU-time in seconds as INTEGER:"
2005	printf "\n >>> "
2006	read cputime 1>/dev/null 2>&1
2007	else
2008	cputime=10000000 # NO CPU LIMIT FOR INTERACTIVE RUNS
2009	fi
2010	else
2011	done=true
2012	fi
2013	cpumax=$cputime
2014	done
2015
2016	(( minuten = cputime / 60 ))
2017	(( sekunden = cputime - minuten * 60 ))
2018
2019
2020	# PRUEFEN DER KERNSPEICHERANFORDERUNG
2021	if [[ $do_batch = true ]]
2022	then
2023	done=false
2024	while [[ $done = false ]]
2025	do
2026	if (( memory == 0 ))
2027	then
2028	printf "\n +++ memory demand is undefined"
2029	printf "\n >>> Please type memory in MByte per process as INTEGER:"
2030	printf "\n >>> "
2031	read memory 1>/dev/null 2>&1
2032	else
2033	done=true
2034	fi
2035	done
2036	fi
2037
2038
2039	# PRUEFEN, OB FUER REMOTE-RECHNUNGEN EIN BENUTZERNAME ANGEGEBEN WURDE
2040	if [[ $do_remote = true && -z $remote_username ]]
2041	then
2042	while [[ -z $remote_username ]]
2043	do
2044	printf "\n +++ username on remote host \"$host\" is undefined"
2045	printf "\n >>> Please type username:"
2046	printf "\n >>> "
2047	read remote_username
2048	done
2049	mc="$mc -u$remote_username"
2050	fi
2051
2052
2053	# SET DEFAULT VALUE FOR MPI MODULE TO BE USED ON SGI-ALTIX
2054	if [[ $host = lcsgib \|\| $host = lcsgih ]]
2055	then
2056	[[ "$mpilib" = "" ]] && export mpilib=mpt
2057	fi
2058
2059
2060
2061	###########################################################################
2062	# HEADER-AUSGABE
2063	###########################################################################
2064
2065
2066	calltime=$(date)
2067	printf "\n"
2068	# [[ $silent = false ]] && clear
2069	printf "#--------------------------------------------------------------# \n"
2070	printf "\| $version$calltime \| \n"
2071	printf "\| \| \n"
2072	spalte1="called on:"; spalte2=$localhost_realname
2073	printf "\| $spalte1$spalte2 \| \n"
2074	if [[ $local_compile = false ]]
2075	then
2076	if [[ $do_remote = true ]]
2077	then
2078	spalte1="execution on:"; spalte2="$host (username: $remote_username)"
2079	else
2080	spalte1="execution on:"; spalte2="$host ($localhost_realname)"
2081	fi
2082	else
2083	spalte1="compiling test only!"; spalte2=""
2084	fi
2085	printf "\| $spalte1$spalte2 \| \n"
2086	if [[ -n $numprocs ]]
2087	then
2088	spalte1="number of PEs:"; spalte2=$numprocs
2089	printf "\| $spalte1$spalte2 \| \n"
2090	fi
2091	if [[ -n $tasks_per_node ]]
2092	then
2093	spalte1="tasks per node:"; spalte2="$tasks_per_node (number of nodes: $nodes)"
2094	printf "\| $spalte1$spalte2 \| \n"
2095	fi
2096	if [[ $threads_per_task != 1 ]]
2097	then
2098	spalte1="threads per task:"; spalte2="$threads_per_task"
2099	printf "\| $spalte1$spalte2 \| \n"
2100	fi
2101	printf "\| \| \n"
2102	if [[ $do_compile = true ]]
2103	then
2104	spalte1=cpp-directives:; spalte2=$cpp_options
2105	printf "\| $spalte1$spalte2 \| \n"
2106	zeile=$(echo "$cpp_options" \| cut -c41-)
2107	while [[ "$zeile" != "" ]]
2108	do
2109	spalte1=""
2110	spalte2=$zeile
2111	printf "\| $spalte1$spalte2 \| \n"
2112	zeile=$(echo "$zeile" \| cut -c41-)
2113	done
2114
2115	spalte1=compiler-options:; spalte2="$fopts"
2116	printf "\| $spalte1$spalte2 \| \n"
2117	zeile=$(echo "$fopts" \| cut -c41-)
2118	while [[ "$zeile" != "" ]]
2119	do
2120	spalte1=""
2121	spalte2=$zeile
2122	printf "\| $spalte1$spalte2 \| \n"
2123	zeile=$(echo "$zeile" \| cut -c41-)
2124	done
2125
2126	spalte1=linker-options:; spalte2=$lopts
2127	printf "\| $spalte1$spalte2 \| \n"
2128	zeile=$(echo "$lopts" \| cut -c41-)
2129	while [[ "$zeile" != "" ]]
2130	do
2131	spalte1=""
2132	spalte2=$zeile
2133	printf "\| $spalte1$spalte2 \| \n"
2134	zeile=$(echo "$zeile" \| cut -c41-)
2135	done
2136
2137	spalte1="main program":; spalte2=$mainprog
2138	printf "\| $spalte1$spalte2 \| \n"
2139	else
2140	spalte1=executable:; spalte2=$executable
2141	printf "\| $spalte1$spalte2 \| \n"
2142	fi
2143	printf "\| \| \n"
2144	spalte1="base name of files":; spalte2=$fname
2145	printf "\| $spalte1$spalte2 \| \n"
2146	if [[ $fname != $afname ]]
2147	then
2148	spalte1="base name of input files":; spalte2=$afname
2149	printf "\| $spalte1$spalte2 \| \n"
2150	fi
2151	spalte1="INPUT control list":; spalte2=$input_list
2152	printf "\| $spalte1$spalte2 \| \n"
2153	spalte1="OUTPUT control list":; spalte2=$output_list
2154	printf "\| $spalte1$spalte2 \| \n"
2155
2156	if [[ $do_batch = true \|\| "$LOADLBATCH" = yes ]]
2157	then
2158	spalte1="memory demand / PE":; spalte2="$memory MB"
2159	printf "\| $spalte1$spalte2 \| \n"
2160	spalte1=CPU-time:; spalte2="$minuten:$sekunden"
2161	printf "\| $spalte1$spalte2 \| \n"
2162	fi
2163
2164	if [[ $do_compile = true ]]
2165	then
2166	printf "\| \| \n"
2167	printf "\| Files to be compiled: \| \n"
2168	zeile=$source_list
2169	while [[ "$zeile" != "" ]]
2170	do
2171	spalte3=$zeile
2172	printf "\| $spalte3 \| \n"
2173	zeile=$(echo "$zeile" \| cut -c61-)
2174	done
2175	fi
2176	printf "#--------------------------------------------------------------#"
2177
2178
2179
2180	# BEDINGTE AUSGABE DER DATEIVERBINDUNGEN
2181	if [[ $do_trace = true ]]
2182	then
2183	(( i = 0 ))
2184	while (( i < iin ))
2185	do
2186	(( i = i + 1 ))
2187	if (( i == 1 ))
2188	then
2189	printf "\n\n >>> INPUT-file assignments:\n"
2190	fi
2191	printf "\n ${localin[$i]} : ${absnamein[$i]}"
2192	done
2193	(( i = 0 ))
2194	while (( i < iout ))
2195	do
2196	(( i = i + 1 ))
2197	if (( i == 1 ))
2198	then
2199	printf "\n\n >>> OUTPUT-file assignments:\n"
2200	fi
2201	printf "\n ${localout[$i]} : ${pathout[$i]}"
2202	done
2203	(( i = 0 ))
2204	while (( i < iic ))
2205	do
2206	(( i = i + 1 ))
2207	if (( i == 1 ))
2208	then
2209	printf "\n\n >>> INPUT-commands:\n"
2210	fi
2211	printf "\n ${in_command[$i]}"
2212	done
2213	(( i = 0 ))
2214	while (( i < ioc ))
2215	do
2216	(( i = i + 1 ))
2217	if (( i == 1 ))
2218	then
2219	printf "\n\n >>> OUTPUT-commands:\n"
2220	fi
2221	printf "\n ${out_command[$i]}"
2222	done
2223	fi
2224
2225
2226	# ABFRAGEN BEI AUFRUF AUF LOKALER MASCHINE
2227	if [[ $remotecall = false && $silent = false && $jobmo != BATCH ]]
2228	then
2229	antwort=dummy
2230	printf "\n\n"
2231	while [[ "$antwort" != y && "$antwort" != Y && "$antwort" != n && "$antwort" != N ]]
2232	do
2233	printf " >>> everything o.k. (y/n) ? "
2234	read antwort
2235	done
2236	if [[ $antwort = n \|\| $antwort = N ]]
2237	then
2238	locat=user_abort; (( iec = 0 )); exit
2239	fi
2240	if [[ $do_batch = true ]]
2241	then
2242	printf " >>> batch-job will be created and submitted"
2243	else
2244	if [[ $local_compile = false ]]
2245	then
2246	printf " >>> MRUN will now continue to execute on this machine"
2247	else
2248	printf " >>> a test compilation will now be carried out on this machine"
2249	fi
2250	fi
2251	fi
2252
2253
2254
2255
2256	# FALLS AUF DIESER MASCHINE GERECHNET WERDEN SOLL, WERDEN JETZT ENTSPRE-
2257	# CHENDE AKTIONEN DURCHGEFUEHRT
2258	if [[ $do_batch = false ]]
2259	then
2260
2261
2262	# TEMPORAEREN KATALOG ERZEUGEN
2263	mkdir -p $TEMPDIR
2264	chmod go+rx $TEMPDIR
2265	tmpcreate=true
2266
2267
2268	# SAEMTLICHE QUELLTEXT-DATEIEN BZW. AUSFUEHRBARES PROGRAMM IN
2269	# TEMPORAERES VERZEICHNIS KOPIEREN
2270	if [[ $do_compile = true ]]
2271	then
2272
2273	# ON NEC, COMPILATION IS DONE ON HOST CROSS VIA CROSS COMPILING
2274	# CREATE A TEMPORARY DIRECTORY ON THAT MACHINE (HOME MOUNTED VIA NFS)
2275	if [[ $localhost = nech ]]
2276	then
2277	TEMPDIR_COMPILE=$HOME/work/${usern}.$kennung
2278	if mkdir -p $TEMPDIR_COMPILE
2279	then
2280	printf "\n *** \"$TEMPDIR_COMPILE\" "
2281	printf "\n is generated as temporary directory for cross compiling\n"
2282	else
2283	printf "\n +++ creating directory \"$TEMPDIR_COMPILE\" "
2284	printf "\n needed for cross compilation failed"
2285	locat=compile
2286	exit
2287	fi
2288	else
2289	TEMPDIR_COMPILE=$TEMPDIR
2290	fi
2291
2292
2293	# PFADNAMEN FUER DAS MAKE-DEPOSITORY ERMITTELN
2294	line=""
2295	grep "%depository_path" $config_file > tmp_mrun
2296	while read line
2297	do
2298	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
2299	then
2300	if [[ "$(echo $line \| cut -d" " -s -f3)" = "" ]]
2301	then
2302	global_depository_path=`echo $line \| cut -d" " -s -f2`
2303	fi
2304	fi
2305	done < tmp_mrun
2306
2307	line=""
2308	grep " $localhost" $config_file \| grep "%depository_path" > tmp_mrun
2309	while read line
2310	do
2311	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
2312	then
2313	if [[ "$(echo $line \| cut -d" " -s -f4)" = "$cond1" && "$(echo $line \| cut -d" " -s -f5)" = "$cond2" ]]
2314	then
2315	local_depository_path=`echo $line \| cut -d" " -s -f2`
2316	fi
2317	fi
2318	done < tmp_mrun
2319
2320	if [[ "$local_depository_path" = "" ]]
2321	then
2322	if [[ "$global_depository_path" != "" ]]
2323	then
2324	local_depository_path=$global_depository_path
2325	else
2326	printf "\n\n +++ no depository path found in configuration file"
2327	printf "\n for local host \"$localhost\" "
2328	printf "\n please set \"\%depository_path\" in configuration file\n"
2329	locat=config_file; exit
2330	fi
2331	fi
2332	eval local_depository_path=$local_depository_path
2333	[[ "$cond1" != "" ]] && local_depository_path=${local_depository_path}_$cond1
2334	[[ "$cond2" != "" ]] && local_depository_path=${local_depository_path}_$cond2
2335
2336
2337	basename=`print $mainprog \| cut -f1 -d"."`
2338	eval make_depository=${local_depository_path}/${basename}_current_version.tar
2339	if [[ ! -f $make_depository ]]
2340	then
2341	printf "\n"
2342	printf "\n *** WARNING: make depository \"$make_depository\" not found"
2343	printf "\n \"make\" will fail, if the Makefile or other source files are missing\n"
2344	else
2345	cp $make_depository $TEMPDIR_COMPILE
2346	cd $TEMPDIR_COMPILE
2347	tar -xf $make_depository > /dev/null 2>&1
2348	cd - > /dev/null
2349	fi
2350
2351	cp SOURCES_FOR_RUN_$fname/* $TEMPDIR_COMPILE
2352
2353	# FALLS USER-INTERFACE VORHANDEN UND AUF DATEI MIT ANDEREM NAMEN
2354	# ALS user_interface.f90 LIEGT, DIESEN GEAENDERTEN NAMEN INS
2355	# MAKEFILE EINTRAGEN
2356	# cd $TEMPDIR_COMPILE
2357	# interface_file=`grep -l "END SUBROUTINE user_parin" $source_list`
2358	# if [[ "$interface_file" != "" ]]
2359	# then
2360	# interface_file=`echo $interface_file \| cut -d"." -f1`
2361	# mv Makefile Makefile_old
2362	# sed "s/user_interface/$interface_file/g" Makefile_old > Makefile
2363	# fi
2364	# cd - > /dev/null
2365	else
2366	cp $executable ${TEMPDIR}/a.out
2367	fi
2368
2369
2370	# WECHSEL IN TEMPORAEREN KATALOG
2371	cd $TEMPDIR
2372	printf "\n *** changed to temporary directory: $TEMPDIR"
2373
2374
2375	# OUTPUT-DATEI-VERBINDUNGEN AUF TEMPORAERER DATEI ABLEGEN
2376	# DIESE DATEI KANN VON SPAETER AUFZURUFENDEN BENUTZERPROZEDUREN GELESEN
2377	# WERDEN, UM ZU LOKALEN DATEINAMEN GEHOERENDE PERMANENTE NAMEN ZU
2378	# ERMITTELN
2379	(( i = 0 ))
2380	while (( i < iout ))
2381	do
2382	(( i = i + 1 ))
2383	if [[ "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = tra \|\| "${actionout[$i]}" = trpe ]]
2384	then
2385	printf "${localout[$i]} ${actionout[$i]}\n${pathout[$i]}\n${localhost}_${fname}${endout[$i]}\n" >> OUTPUT_FILE_CONNECTIONS
2386	else
2387	printf "${localout[$i]} ${actionout[$i]}\n${pathout[$i]}\n${frelout[$i]}\n" >> OUTPUT_FILE_CONNECTIONS
2388	fi
2389	done
2390
2391
2392	# EVTL. UEBERSETZUNGSAKTIONEN STARTEN
2393	if [[ $do_compile = true ]]
2394	then
2395
2396
2397	# COMPILING WITH MAKE (ON NEC COMPILER IS CALLED ON HOST CROSS)
2398	printf "\n\n\n *** compilation starts \n$striche\n"
2399	printf " *** compilation with make using following options:\n"
2400	printf " make depository: $make_depository"
2401	printf " compilername: $compiler_name\n"
2402	printf " options: $fopts\n"
2403	printf " preprocessor-directives: $cpp_options \n"
2404	printf " linker-options: $lopts \n"
2405	printf " source code files: $source_list \n"
2406
2407	if [[ $localhost = nech ]]
2408	then
2409	ssh 136.172.44.192 -l $usern ". /SX/opt/etc/initsx.sh; cd \$HOME/work/${usern}.$kennung; sxmake -f Makefile PROG=a.out F90=$compiler_name COPT=\"$cpp_options\" F90FLAGS=\"$fopts\" LDFLAGS=\"$lopts\" "
2410	cp $TEMPDIR_COMPILE/a.out .
2411	[[ $? != 0 ]] && compile_error=true
2412	rm -rf $TEMPDIR_COMPILE
2413	elif [[ $localhost = ibmh ]]
2414	then
2415	printf " compiler is called via ssh on \"plogin1\" \n"
2416	ssh plogin1 -l $usern "export PATH=/sw/ibm/xlf/12.1.0.3/usr/bin:$PATH; cd $TEMPDIR; make -f Makefile PROG=a.out F90=$compiler_name COPT=\"$cpp_options\" F90FLAGS=\"$fopts\" LDFLAGS=\"$lopts\" "
2417	[[ ! -f a.out ]] && compile_error=true
2418	continue # ANDERENFALLS IST STATUS=1, FALLS A.OUT VORHANDEN
2419	elif [[ $localhost = lcsgib ]]
2420	then
2421	printf " compiler is called via ssh on \"bicegate\" using module \"$mpilib\" \n"
2422	ssh 130.73.232.103 -l $usern ". /usr/share/modules/init/bash; module load $mpilib; cd $TEMPDIR; make -f Makefile PROG=a.out F90=$compiler_name COPT=\"$cpp_options\" F90FLAGS=\"$fopts\" LDFLAGS=\"$lopts\" "
2423	[[ ! -f a.out ]] && compile_error=true
2424	continue # ANDERENFALLS IST STATUS=1, FALLS A.OUT VORHANDEN
2425	elif [[ $localhost = lcsgih ]]
2426	then
2427	printf " compiler is called via ssh on \"hicegate2\" using module \"$mpilib\" \n"
2428	ssh 130.75.4.103 -l $usern ". /usr/share/modules/init/bash; module load $mpilib; cd $TEMPDIR; make -f Makefile PROG=a.out F90=$compiler_name COPT=\"$cpp_options\" F90FLAGS=\"$fopts\" LDFLAGS=\"$lopts\" 2>&1 "
2429	[[ ! -f a.out ]] && compile_error=true
2430	continue # ANDERENFALLS IST STATUS=1, FALLS A.OUT VORHANDEN
2431	else
2432	[[ $localhost = lctit ]] && export LM_LICENSE_FILE=27050@tggls
2433	make -f Makefile PROG=a.out F90=$compiler_name COPT="$cpp_options" F90FLAGS="$fopts" LDFLAGS="$lopts"
2434	fi
2435
2436	if [[ $? != 0 \|\| "$compile_error" = true \|\| "$module_compile_error" = true ]]
2437	then
2438	printf "\n +++ error occured while compiling or linking"
2439	locat=compile
2440
2441	# WORKAROUND: REMOVE IF CONSTRUCT LATER, BUT KEEP THE EXIT!
2442	# if [[ $localhost != lcsgib && $localhost != lcsgih ]]
2443	# then
2444	exit
2445	# else
2446	# locat=normal
2447	# fi
2448	else
2449	printf "$striche\n *** compilation finished \n"
2450	fi
2451	fi
2452
2453
2454	# FALLS NUR TESTWEISE KOMPILIERT WERDEN SOLLTE, IST MRUN JETZT FERTIG
2455	if [[ $local_compile = true ]]
2456	then
2457	cd $HOME
2458	rm -rf $TEMPDIR
2459	locat=local_compile; exit
2460	fi
2461
2462
2463	# BEREITSTELLEN DER INPUT-DATEIEN
2464	# SCHLEIFE UEBER ALLE VOM BENUTZER ANGEGEBENEN DATEIEN
2465	(( i = 0 ))
2466	while (( i < iin ))
2467	do
2468	(( i = i + 1 ))
2469	if (( i == 1 ))
2470	then
2471	printf "\n\n *** providing INPUT-files:\n$striche"
2472	fi
2473
2474
2475	# OPTIONALE DATEIEN BEI NICHTVORHANDENSEIN UEBERGEHEN
2476	if [[ "${transin[$i]}" = unavailable ]]
2477	then
2478	if [[ "${extin[$i]}" = "" \|\| "${extin[$i]}" = " " ]]
2479	then
2480	printf "\n +++ WARNING: input file \"${pathin[$i]}/${afname}${endin[$i]}\" "
2481	printf "\n is not available!"
2482	else
2483	printf "\n +++ WARNING: input file \"${pathin[$i]}/${afname}${endin[$i]}.${extin[$i]}\" "
2484	printf "\n is not available!"
2485	fi
2486	continue
2487	fi
2488
2489	# PRUEFEN, OB EINZELDATEI ODER DATEI PRO PROZESSOR
2490	files_for_pes=false; datentyp=file
2491	if [[ "${actionin[$i]}" = pe && -n $numprocs ]]
2492	then
2493	files_for_pes=true; datentyp=directory
2494	actionin[$i]=""
2495	elif [[ "${actionin[$i]}" = pe && ! -n $numprocs ]]
2496	then
2497	actionin[$i]=""
2498	elif [[ "${actionin[$i]}" = arpe && -n $numprocs ]]
2499	then
2500	files_for_pes=true; datentyp=directory
2501	actionin[$i]="ar"
2502	elif [[ "${actionin[$i]}" = arpe && ! -n $numprocs ]]
2503	then
2504	actionin[$i]="ar"
2505	elif [[ "${actionin[$i]}" = flpe && -n $numprocs ]]
2506	then
2507	files_for_pes=true; datentyp=directory
2508	actionin[$i]="fl"
2509	elif [[ "${actionin[$i]}" = flpe && ! -n $numprocs ]]
2510	then
2511	actionin[$i]="fl"
2512	fi
2513
2514	if [[ $files_for_pes = true ]]
2515	then
2516	printf "\n >>> INPUT: ${absnamein[$i]}/.... to ${localin[$i]}"
2517	else
2518	printf "\n >>> INPUT: ${absnamein[$i]} to ${localin[$i]}"
2519	fi
2520
2521	# INPUT-DATEI FUER EINEN FORTSETZUNGSLAUF. ES WIRD GEPRUEFT,
2522	# OB DIESE DATEI NOCH AUF DEM TEMPORAEREN DATENKATALOG VORHANDEN
2523	# IST. FALLS NICHT, WIRD VERSUCHT, SIE ANSCHLIESSEND VOM ARCHIV-
2524	# SERVER ZU HOLEN
2525	if [[ "${actionin[$i]}" = fl ]]
2526	then
2527	printf "\n $datentyp will be fetched from temporary directory \"${tmp_data_catalog}\" !"
2528	if [[ $files_for_pes = false ]]
2529	then
2530	if [[ -f "$tmp_data_catalog/${frelin[$i]}" ]]
2531	then
2532	ln $tmp_data_catalog/${frelin[$i]} ${localin[$i]}
2533	got_tmp[$i]=true
2534	elif [[ -f "$WORK/${frelin[$i]}" && $ignore_archive_error = true ]]
2535	then
2536	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" !"
2537	printf "\n *** trying to use backup copy in \"$WORK\" "
2538	cp $WORK/${frelin[$i]} ${localin[$i]}
2539	else
2540	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" "
2541	printf "\n or \"$tmp_data_catalog\" does not exist!"
2542	printf "\n *** trying to get copy from archive"
2543	actionin[$i]=ar
2544	fi
2545	else
2546	if [[ -d "$tmp_data_catalog/${frelin[$i]}" ]]
2547	then
2548	mkdir ${localin[$i]}
2549	cd $tmp_data_catalog/${frelin[$i]}
2550	for file in $(ls *)
2551	do
2552	ln $file $TEMPDIR/${localin[$i]}
2553	done
2554	cd $TEMPDIR
2555	got_tmp[$i]=true
2556	elif [[ -d "$WORK/${frelin[$i]}" && $ignore_archive_error = true ]]
2557	then
2558	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" !"
2559	printf "\n *** trying to use backup copy in \"$WORK\" "
2560	cp -r $WORK/${frelin[$i]} ${localin[$i]}
2561	else
2562	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" "
2563	printf "\n or \"$tmp_data_catalog\" does not exist!"
2564	printf "\n *** trying to get copy from archive"
2565	actionin[$i]=ar
2566	fi
2567	fi
2568	fi
2569
2570
2571	# DATEI LIEGT AUF ARCHIV-SERVER
2572	if [[ "${actionin[$i]}" = ar ]]
2573	then
2574
2575	if [[ $files_for_pes = false ]]
2576	then
2577	printf "\n file will be restored from archive-system ($archive_system)!"
2578	else
2579	printf "\n directory will be restored from archive-system ($archive_system)!"
2580	fi
2581
2582	file_restored=false
2583
2584	if [[ $archive_system = asterix ]]
2585	then
2586	do_stagein=true
2587	(( stagein_anz = 0 ))
2588	while [[ $do_stagein = true ]]
2589	do
2590	if [[ $files_for_pes = false ]]
2591	then
2592	stagein -O ${frelin[$i]} > STAGEIN_OUTPUT
2593	else
2594	stagein -t -O ${frelin[$i]} > STAGEIN_OUTPUT
2595	fi
2596	cat STAGEIN_OUTPUT
2597	if [[ $(grep -c "st.msg:i24" STAGEIN_OUTPUT) != 0 ]]
2598	then
2599	file_restored=true
2600	do_stagein=false
2601	else
2602	(( stagein_anz = stagein_anz + 1 ))
2603	if (( stagein_anz == 10 ))
2604	then
2605	printf "\n +++ stagein stoped after 10 tries"
2606	locat=stage
2607	exit
2608	fi
2609	printf "\n +++ restoring from archive failed, trying again:"
2610	sleep 900
2611	fi
2612	done
2613	elif [[ $archive_system = DMF ]]
2614	then
2615	if [[ $files_for_pes = false ]]
2616	then
2617	printf "\n +++ restoring of single files impossible with $archive_system !\n"
2618	locat=DMF
2619	exit
2620	else
2621	find $ARCHIVE/${frelin[$i]} -type m -print \| dmget
2622	cp -r $ARCHIVE/${frelin[$i]} $PWD
2623	file_restored=true
2624	fi
2625	elif [[ $archive_system = tivoli ]]
2626	then
2627	if [[ $files_for_pes = false ]]
2628	then
2629	if [[ $localhost = ibmh ]]
2630	then
2631	ssh $usern@hdata.hlrn.de "cp $PERM/${frelin[$i]} $PWD"
2632	else
2633	ssh $usern@bdata.hlrn.de "cp $PERM/${frelin[$i]} $PWD"
2634	fi
2635	else
2636	(( inode = 0 ))
2637	while (( inode < nodes ))
2638	do
2639	if [[ $localhost = ibmh ]]
2640	then
2641	ssh $usern@hdata.hlrn.de "cd $PWD; tar xf $PERM/${frelin[$i]}/${frelin[$i]}.node_$inode.tar"
2642	else
2643	ssh $usern@bdata.hlrn.de "cd $PWD; tar xf $PERM/${frelin[$i]}/${frelin[$i]}.node_$inode.tar"
2644	fi
2645	(( inode = inode + 1 ))
2646	done
2647	fi
2648	file_restored=true
2649	elif [[ $archive_system = ut ]]
2650	then
2651	if [[ $files_for_pes = false ]]
2652	then
2653	cp $UT/${frelin[$i]} .
2654	else
2655	(( inode = 0 ))
2656	while (( inode < nodes ))
2657	do
2658	tar xf $UT/${frelin[$i]}/${frelin[$i]}.node_$inode.tar
2659	(( inode = inode + 1 ))
2660	done
2661	fi
2662	file_restored=true
2663	else
2664	printf "\n +++ archive_system=\"$archive_system\" restore impossible!"
2665	locat=rearchive
2666	exit
2667	fi
2668
2669	if [[ $file_restored = true ]]
2670	then
2671
2672	# DATEI AUCH AUF TEMPORAERES DATENVERZEICHNIS LEGEN, DAMIT
2673	# SIE BEI WEITEREN ZUGRIFFEN NOCH VORHANDEN IST
2674	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog; chmod g+rx $tmp_data_catalog
2675	if [[ $files_for_pes = false ]]
2676	then
2677	ln -f ${frelin[$i]} $tmp_data_catalog/${frelin[$i]}
2678	else
2679	mkdir $tmp_data_catalog/${frelin[$i]}
2680	ln -f ${frelin[$i]}/* $tmp_data_catalog/${frelin[$i]}
2681	fi
2682	got_tmp[$i]=true
2683
2684	# DATEI UNTER LOKALEM NAMEN ZUR VERFUEGUNG STELLEN
2685	mv ${frelin[$i]} ${localin[$i]}
2686
2687	fi
2688	fi
2689
2690
2691	# DATEI LIEGT IM VOM BENUTZER ANGEGEBENEN VERZEICHNIS
2692	if [[ "${actionin[$i]}" = "" \|\| "${actionin[$i]}" = "di" \|\| "${actionin[$i]}" = "npe" ]]
2693	then
2694
2695	if [[ "${actionin[$i]}" = "npe" && -n $numprocs ]]
2696	then
2697
2698	# DATEI WIRD FUER DIE PROZESSOREN EINES PARALLERECHNERS BEREITGESTELLT
2699	printf "\n file will be provided for $numprocs processors"
2700	mkdir ${localin[$i]}
2701	ival=$numprocs
2702	(( ii = 0 ))
2703	while (( ii <= ival-1 ))
2704	do
2705	if (( ii < 10 ))
2706	then
2707	cp ${absnamein[$i]} ${localin[$i]}/_000$ii
2708	elif (( ii < 100 ))
2709	then
2710	cp ${absnamein[$i]} ${localin[$i]}/_00$ii
2711	elif (( ii < 1000 ))
2712	then
2713	cp ${absnamein[$i]} ${localin[$i]}/_0$ii
2714	else
2715	cp ${absnamein[$i]} ${localin[$i]}/_$ii
2716	fi
2717	(( ii = ii + 1 ))
2718	done
2719
2720	else
2721
2722	if [[ $files_for_pes = true ]]
2723	then
2724
2725	# DIE DEN PROZESSOREN EINES PARALLELRECHNERS ZUGEHOERIGEN
2726	# DATEIEN WERDEN BEREITGESTELLT, INDEM ZUERST DER GESAMTE
2727	# KATALOGINHALT KOPIERT UND DANN DIE EINZELNEN DATEIEN
2728	# PER MOVE UMBENANNT WERDEN
2729	printf "\n providing $numprocs files for the respective processors"
2730	mkdir ${localin[$i]}
2731	if [[ $link_local_input = true ]]
2732	then
2733	printf " using ln -f\n"
2734	cd ${absnamein[$i]}
2735	for file in $(ls *)
2736	do
2737	ln -f $file ${localin[$i]}
2738	done
2739	cd $TEMPDIR
2740	fi
2741	# If "ln -f" fails of if "$link_local_input = false" do a normal "cp -r"
2742	if [[ ! -f "${localin[$i]}/_0000" ]]
2743	then
2744	if [[ $link_local_input = true ]]
2745	then
2746	printf " ln failed for .../_0000, using cp...\n"
2747	fi
2748	cp -r ${absnamein[$i]}/* ${localin[$i]}
2749	fi
2750
2751	else
2752	# BEREITSTELLUNG AUF EINPROZESSORRECHNERN
2753	if [[ $link_local_input = true ]]
2754	then
2755	printf " using ln -f\n"
2756	ln -f ${absnamein[$i]} ${localin[$i]}
2757	fi
2758	# If "ln -f" fails of if "$link_local_input = false" do a normal "cp"
2759	if [[ ! -f "${localin[$i]}" ]]
2760	then
2761	if [[ $link_local_input = true ]]
2762	then
2763	printf " ln failed, using cp...\n"
2764	fi
2765	cp ${absnamein[$i]} ${localin[$i]}
2766	fi
2767	fi
2768	fi
2769	fi
2770
2771	done
2772	if (( i != 0 ))
2773	then
2774	printf "\n$striche\n *** all INPUT-files provided \n"
2775	fi
2776
2777
2778	# EVENTUELLE INPUT-KOMMANDOS ABARBEITEN
2779	(( i = 0 ))
2780	while (( i < iic ))
2781	do
2782	(( i = i + 1 ))
2783	if (( i == 1 ))
2784	then
2785	printf "\n\n *** execution of INPUT-commands:\n$striche"
2786	fi
2787	printf "\n >>> ${in_command[$i]}"
2788	eval ${in_command[$i]}
2789	if (( i == iic ))
2790	then
2791	printf "\n$striche\n"
2792	fi
2793	done
2794
2795
2796	# VERBLEIBENDE CPU-ZEIT BERECHNEN
2797	cpurest=${cpumax}.
2798
2799
2800	# START DVR STREAMING SERVER
2801	if [[ $(echo $package_list \| grep -c dvrp_graphics) != 0 ]]
2802	then
2803	if [[ "$dvr_server" != "" ]]
2804	then
2805
2806	printf "\n\n *** preparing the dvr streaming server configuration file"
2807
2808	# Check, if a dvr server is already running
2809	running_dvrserver_id=`echo $(ps -edaf \| grep .dvrserver.config \| grep -v grep) \| cut -d" " -f2`
2810	if [[ "$running_dvrserver_id" != "" ]]
2811	then
2812
2813	printf "\n\n +++ WARNING: A dvr server with id=$running_dvrserver_id is already running!"
2814	printf "\n This server is used instead starting a new one!"
2815	printf "\n If required, script \"process_dvr_output\" has to be run manually."
2816
2817	else
2818
2819	# COPY CONFIGURATION FILE FOR STREAMING SERVER FROM REPOSITORY TO HERE
2820	if [[ -f ${PALM_BIN}/.dvrserver.config ]]
2821	then
2822	cp ${PALM_BIN}/.dvrserver.config .
2823
2824	# Entering the BASEDIR, UID and GID into this file
2825	user_id=`id -u`
2826	group_id=`id -g`
2827	# & is needed as seperator, because TEMPDIR contains /
2828	sed "s&<replace by dvr data directory>&${TEMPDIR}&g" .dvrserver.config > .dvrserver.1
2829	sed "s/<replace by user id>/$user_id/g" .dvrserver.1 > .dvrserver.2
2830	sed "s/<replace by group id>/$group_id/g" .dvrserver.2 > .dvrserver.3
2831	mv .dvrserver.3 .dvrserver.config
2832	rm .dvrserver.1 .dvrserver.2
2833
2834	# Start dvr server in background, get his id and print on terminal
2835	$dvr_server .dvrserver.config >> DVR_LOGFILE 2>&1 &
2836	dvrserver_id=`echo $(ps -edaf \| grep .dvrserver.config) \| cut -d" " -f2`
2837	printf "\n *** streaming server with id=$dvrserver_id is started in background"
2838	local_dvrserver_running=.TRUE.
2839	else
2840	printf "\n +++ missing file \".dvrserver.config\" in directory:"
2841	printf "\n \"$PALM_BIN\" "
2842	locat=dvr
2843	exit
2844	fi
2845
2846	fi
2847
2848	else
2849	printf "\n\n --- INFORMATIVE: no dvr streaming server will be started"
2850	fi
2851	fi
2852
2853
2854	# NAMELIST-DATEI MIT WERTEN VON ENVIRONMENT-VARIABLEN ERZEUGEN (ZU
2855	# LESEN VON PALM)
2856	cat > ENVPAR << %%END%%
2857	&envpar run_identifier = '$fname', host = '$localhost',
2858	write_binary = '$write_binary', tasks_per_node = $tasks_per_node,
2859	maximum_cpu_time_allowed = ${cpumax}.,
2860	revision = '$global_revision',
2861	local_dvrserver_running = $local_dvrserver_running /
2862
2863	%%END%%
2864
2865
2866	# PROGRAMMSTART
2867	printf "\n\n *** execution starts in directory\n \"`pwd`\"\n$striche\n"
2868	PATH=$PATH:$TEMPDIR
2869
2870	# MPI debug option (argument checking, slows down execution due to increased latency)
2871	if [[ "$mpi_debug" = true ]]
2872	then
2873	export MPI_CHECK_ARGS=1
2874	printf "\n +++ MPI_CHECK_ARGS=$MPI_CHECK_ARGS"
2875	fi
2876
2877	if [[ "$cond1" = debug \|\| "$cond2" = debug ]]
2878	then
2879	if [[ "$ENVIRONMENT" = BATCH ]]
2880	then
2881	if [[ $(echo $localhost \| cut -c1-5) != lcsgi ]]
2882	then
2883	printf "\n +++ debug is allowed in interactive mode only"
2884	locat=debug
2885	exit
2886	fi
2887	fi
2888	if [[ $localhost = decalpha ]]
2889	then
2890	dxladebug a.out
2891	elif [[ $localhost = ibmb \|\| $localhost = ibmh ]]
2892	then
2893
2894	# SETUP THE IBM MPI ENVIRONMENT
2895	export MP_SHARED_MEMORY=yes
2896	export AIXTHREADS_SCOPE=S
2897	export OMP_NUM_THREADS=$threads_per_task
2898	export AUTHSTATE=files
2899	export XLFRTEOPTS="nlwidth=132:err_recovery=no" # RECORD-LENGTH OF NAMELIST-OUTPUT
2900
2901	# FOLLOWING OPTIONS ARE MANDATORY FOR TOTALVIEW
2902	export MP_ADAPTER_USE=shared
2903	export MP_CPU_USE=multiple
2904	export MP_TIMEOUT=1200
2905
2906	unset MP_TASK_AFFINITY
2907
2908	# SO FAR, TOTALVIEW NEEDS HOSTFILE MECHANISM FOR EXECUTION
2909	#(( ii = 1 ))
2910	#while (( ii <= $numprocs ))
2911	#do
2912	# echo $localhost_realname >> hostfile
2913	# (( ii = ii + 1 ))
2914	#done
2915	#export MP_HOSTFILE=hostfile
2916
2917	if [[ "$LOADLBATCH" = yes ]]
2918	then
2919	totalview poe a.out $ROPTS
2920	else
2921	echo totalview poe -a a.out -procs $numprocs -rmpool 0 -nodes 1 $ROPTS
2922	export TVDSVRLAUNCHCMD=ssh
2923	totalview poe -a a.out -procs $numprocs -rmpool 0 -nodes 1 $ROPTS
2924	fi
2925	elif [[ $(echo $localhost \| cut -c1-5) = lcsgi ]]
2926	then
2927	# CURRENTLY NO DEBUGGER ON LCSGI
2928	if [[ $run_coupled_model = true ]]
2929	then
2930	printf "\n +++ no debug in coupled mode available on \"$localhost\" "
2931	locat=debug
2932	exit
2933	else
2934	echo "no_coupling" > runfile_atmos
2935	fi
2936	(( ii = $numprocs / $threads_per_task ))
2937	export OMP_NUM_THREADS=$threads_per_task
2938	echo "OMP_NUM_THREADS=$OMP_NUM_THREADS"
2939	if [[ $threads_per_task != 1 ]]
2940	then
2941	printf "\n threads per task: $threads_per_task"
2942	fi
2943	printf "\n\n"
2944	if [[ $( echo $mpilib \| cut -c1-3 ) = mpt ]]
2945	then
2946	# export MPI_LAUNCH_TIMEOUT=360
2947	if [[ "$totalview" = true ]]
2948	then
2949	printf "\n running totalview debugger"
2950	mpiexec_mpt -tv -n $ii ./a.out $ROPTS < runfile_atmos
2951	else
2952	mpiexec_mpt -np $ii ./a.out $ROPTS < runfile_atmos
2953	fi
2954	elif [[ $( echo $mpilib \| cut -c1-3 ) = mva ]]
2955	then
2956	# ulimit -s 300000 # A too large stack size causes problems
2957	# export MV2_NUM_PORTS=2
2958	# export MV2_CPU_MAPPING=0:1:2:3
2959	if [[ "$totalview" = true ]]
2960	then
2961	printf "\n running totalview debugger"
2962	mpiexec -tv ./a.out $ROPTS < runfile_atmos
2963	else
2964	mpiexec ./a.out $ROPTS < runfile_atmos
2965	fi
2966	fi
2967	else
2968	printf "\n +++ no debug available on \"$localhost\" "
2969	printf "\n or not implemented in mrun so far"
2970	locat=debug
2971	exit
2972	fi
2973	else
2974	if [[ -n $numprocs ]]
2975	then
2976	# RUNNING THE PROGRAM ON PARALLEL MACHINES
2977	if [[ $(echo $host \| cut -c1-3) = ibm ]]
2978	then
2979	# SETUP THE IBM MPI ENVIRONMENT
2980	if [[ $host != ibmh ]]
2981	then
2982	export MP_SHARED_MEMORY=yes
2983	export AIXTHREAD_SCOPE=S
2984	export OMP_NUM_THREADS=$threads_per_task
2985	export XLSMPOPTS="spins=0:yields=0:stack=20000000"
2986	export AUTHSTATE=files
2987	export XLFRTEOPTS="nlwidth=132:err_recovery=no" # RECORD-LENGTH OF NAMELIST-OUTPUT
2988	# export MP_PRINTENV=yes
2989
2990	# TUNING-VARIABLEN ZUR VERBESSERUNG DER KOMMUNIKATION
2991	# ZEIGEN ABER DERZEIT (SEP 04, FEDERATION) KAUM WIRKUNG
2992	export MP_WAIT_MODE=poll
2993	[[ $node_usage = not_shared ]] && export MP_SINGLE_THREAD=yes
2994	fi
2995	if [[ "$LOADLBATCH" = yes ]]
2996	then
2997	printf "\n--- Control: OMP_NUM_THREADS = \"$OMP_NUM_THREADS\" \n"
2998	if [[ "$cond1" = hpmcount \|\| "$cond2" = hpmcount ]]
2999	then
3000	/opt/optibm/HPM_2_4_1/bin/hpmcount a.out $ROPTS
3001	else
3002	if [[ $run_coupled_model = false ]]
3003	then
3004	if [[ "$ocean_file_appendix" = true ]]
3005	then
3006	echo "precursor_ocean" > runfile_atmos
3007	else
3008	echo "precursor_atmos" > runfile_atmos
3009	fi
3010	else
3011	(( iia = $numprocs_atmos / $threads_per_task ))
3012	(( iio = $numprocs_ocean / $threads_per_task ))
3013	printf "\n coupled run ($iia atmosphere, $iio ocean)"
3014	printf "\n using $coupled_mode coupling"
3015	printf "\n\n"
3016	echo "coupled_run $iia $iio" > runfile_atmos
3017	fi
3018	poe ./a.out $ROPTS < runfile_atmos
3019	fi
3020	else
3021	if [[ $localhost = ibmb \|\| $localhost = ibmh \|\| $localhost = ibms ]]
3022	then
3023	poe a.out -procs $numprocs -nodes 1 -rmpool 0 $ROPTS
3024	elif [[ $localhost = ibmy ]]
3025	then
3026	if [[ -f $hostfile ]]
3027	then
3028	cp $hostfile hostfile
3029	else
3030	(( ii = 1 ))
3031	while (( ii <= $numprocs ))
3032	do
3033	echo $localhost_realname >> hostfile
3034	(( ii = ii + 1 ))
3035	done
3036	fi
3037	export MP_HOSTFILE=hostfile
3038	if [[ $run_coupled_model = false ]]
3039	then
3040	if [[ "$ocean_file_appendix" = true ]]
3041	then
3042	echo "precursor_ocean" > runfile_atmos
3043	else
3044	echo "precursor_atmos" > runfile_atmos
3045	fi
3046	else
3047	(( iia = $numprocs_atmos / $threads_per_task ))
3048	(( iio = $numprocs_ocean / $threads_per_task ))
3049	printf "\n coupled run ($iia atmosphere, $iio ocean)"
3050	printf "\n using $coupled_mode coupling"
3051	printf "\n\n"
3052	echo "coupled_run $iia $iio" > runfile_atmos
3053	fi
3054	./a.out -procs $tasks_per_node $ROPTS < runfile_atmos
3055
3056	else
3057	if [[ "$host_file" = "" ]]
3058	then
3059	printf "\n +++ no hostfile given in configuration file"
3060	locat=config_file
3061	exit
3062	else
3063	eval host_file=$host_file
3064	fi
3065	export MP_HOSTFILE=$host_file
3066	poe a.out -procs $numprocs -tasks_per_node $numprocs $ROPTS
3067	fi
3068	fi
3069	elif [[ $host = nech \|\| $host = necriam ]]
3070	then
3071	(( ii = nodes ))
3072	if [[ $ii = 1 ]]
3073	then
3074	export F_ERRCNT=0 # acceptable number of errors before program is stopped
3075	export MPIPROGINF=YES
3076	# export F_TRACE=YES\|FMT1\|FMT2 # output of ftrace informations to job protocol
3077	echo "*** execution on single node with mpirun"
3078	mpirun -np $numprocs ./a.out $ROPTS
3079	else
3080	(( i = 0 ))
3081	while (( i < ii ))
3082	do
3083	echo "-h $i -p $tasks_per_node -e ./mpi_exec_shell" >> multinode_config
3084	(( i = i + 1 ))
3085	done
3086
3087	echo "#!/bin/sh" > mpi_exec_shell
3088	echo " " >> mpi_exec_shell
3089	echo "set -u" >> mpi_exec_shell
3090	echo "F_ERRCNT=0" >> mpi_exec_shell
3091	echo "MPIPROGINV=YES" >> mpi_exec_shell
3092	echo "OMP_NUM_THREADS=$threads_per_task" >> mpi_exec_shell
3093	echo "cpurest=$cpurest" >> mpi_exec_shell
3094	echo "fname=$fname" >> mpi_exec_shell
3095	echo "localhost=$localhost" >> mpi_exec_shell
3096	echo "return_addres=$return_addres" >> mpi_exec_shell
3097	echo "return_username=$return_username" >> mpi_exec_shell
3098	echo "tasks_per_node=$tasks_per_node" >> mpi_exec_shell
3099	echo "write_binary=$write_binary" >> mpi_exec_shell
3100	echo "use_seperate_pe_for_dvrp_output=$use_seperate_pe_for_dvrp_output" >> mpi_exec_shell
3101	echo " " >> mpi_exec_shell
3102	echo "export F_ERRCNT" >> mpi_exec_shell
3103	echo "export MPIPROGINV" >> mpi_exec_shell
3104	echo "export OMP_NUM_THREADS" >> mpi_exec_shell
3105	echo "export cpurest" >> mpi_exec_shell
3106	echo "export fname" >> mpi_exec_shell
3107	echo "export localhost" >> mpi_exec_shell
3108	echo "export return_addres" >> mpi_exec_shell
3109	echo "export return_username" >> mpi_exec_shell
3110	echo "export tasks_per_node" >> mpi_exec_shell
3111	echo "export write_binary" >> mpi_exec_shell
3112	echo "export use_seperate_pe_for_dvrp_output" >> mpi_exec_shell
3113	echo " " >> mpi_exec_shell
3114	echo "exec ./a.out" >> mpi_exec_shell
3115
3116	chmod u+x mpi_exec_shell
3117	export MPIPROGINF=YES
3118	mpirun -f multinode_config &
3119	wait
3120
3121	fi
3122	elif [[ $(echo $host \| cut -c1-2) = lc && $host != lctit ]]
3123	then
3124
3125	# COPY HOSTFILE FROM SOURCE DIRECTORY OR CREATE IT, IF IT
3126	# DOES NOT EXIST
3127	if [[ $host != lcsgih && $host != lcsgib ]]
3128	then
3129	if [[ -f $hostfile ]]
3130	then
3131	cp $hostfile hostfile
3132	else
3133	(( ii = 1 ))
3134	while (( ii <= $numprocs / $threads_per_task ))
3135	do
3136	echo $localhost_realname >> hostfile
3137	(( ii = ii + 1 ))
3138	done
3139	fi
3140	eval zeile=\"`head -n $ii hostfile`\"
3141	printf "\n *** running on: $zeile"
3142	fi
3143
3144	(( ii = $numprocs / $threads_per_task ))
3145	export OMP_NUM_THREADS=$threads_per_task
3146	# echo "OMP_NUM_THREADS=$OMP_NUM_THREADS"
3147	if [[ $threads_per_task != 1 ]]
3148	then
3149	printf "\n threads per task: $threads_per_task"
3150	fi
3151	if [[ $run_coupled_model = false ]]
3152	then
3153	if [[ "$ocean_file_appendix" = true ]]
3154	then
3155	echo "precursor_ocean" > runfile_atmos
3156	else
3157	echo "precursor_atmos" > runfile_atmos
3158	fi
3159	printf "\n\n"
3160	if [[ $host = lcsgih \|\| $host = lcsgib ]]
3161	then
3162	if [[ $( echo $mpilib \| cut -c1-3 ) = mpt ]]
3163	then
3164	# export MPI_LAUNCH_TIMEOUT=360
3165	mpiexec_mpt -np $ii ./a.out $ROPTS < runfile_atmos
3166	elif [[ $( echo $mpilib \| cut -c1-3 ) = mva ]]
3167	then
3168	# ulimit -s 300000 # A too large stack size causes problems
3169	# export MV2_NUM_PORTS=2
3170	# export MV2_CPU_MAPPING=0:1:2:3
3171	mpiexec -np $ii ./a.out $ROPTS < runfile_atmos
3172	fi
3173	elif [[ $host = lcxt4 ]]
3174	then
3175	aprun -n $ii -N $tasks_per_node a.out $ROPTS < runfile_atmos
3176	else
3177	mpiexec -machinefile hostfile -n $ii a.out < runfile_atmos $ROPTS
3178	fi
3179	else
3180
3181	# currently there is no full MPI-2 support on ICE and XT4
3182	(( iia = $numprocs_atmos / $threads_per_task ))
3183	(( iio = $numprocs_ocean / $threads_per_task ))
3184	printf "\n coupled run ($iia atmosphere, $iio ocean)"
3185	printf "\n using $coupled_mode coupling"
3186	printf "\n\n"
3187
3188	if [[ $coupled_mode = "mpi2" ]]
3189	then
3190	echo "atmosphere_to_ocean $iia $iio" > runfile_atmos
3191	echo "ocean_to_atmosphere $iia $iio" > runfile_ocean
3192	if [[ $host = lcsgih \|\| $host = lcsgib ]]
3193	then
3194
3195	if [[ $( echo $mpilib \| cut -c1-3 ) = mpt ]]
3196	then
3197	# export MPI_LAUNCH_TIMEOUT=360
3198	mpiexec_mpt -np $iia ./a.out $ROPTS < runfile_atmos &
3199	mpiexec_mpt -np $iio ./a.out $ROPTS < runfile_ocean &
3200	elif [[ $( echo $mpilib \| cut -c1-3 ) = mva ]]
3201	then
3202	# ulimit -s 300000 # A too large stack size causes problems
3203	# export MV2_NUM_PORTS=2
3204	# export MV2_CPU_MAPPING=0:1:2:3
3205	mpiexec -n $iia ./a.out $ROPTS < runfile_atmos &
3206	mpiexec -n $iio ./a.out $ROPTS < runfile_ocean &
3207	fi
3208
3209	elif [[ $host = lcxt4 ]]
3210	then
3211
3212	aprun -n $iia -N $tasks_per_node a.out < runfile_atmos $ROPTS &
3213	aprun -n $iio -N $tasks_per_node a.out < runfile_ocean $ROPTS &
3214
3215	else
3216	# WORKAROUND BECAUSE mpiexec WITH -env option IS NOT AVAILABLE ON SOME SYSTEMS
3217	mpiexec -machinefile hostfile -n $iia a.out $ROPTS < runfile_atmos &
3218	mpiexec -machinefile hostfile -n $iio a.out $ROPTS < runfile_ocean &
3219	# mpiexec -machinefile hostfile -n $iia -env coupling_mode atmosphere_to_ocean a.out $ROPTS &
3220	# mpiexec -machinefile hostfile -n $iio -env coupling_mode ocean_to_atmosphere a.out $ROPTS &
3221	fi
3222	wait
3223
3224	else
3225
3226	echo "coupled_run $iia $iio" > runfile_atmos
3227	if [[ $host = lcsgih \|\| $host = lcsgib ]]
3228	then
3229
3230	if [[ $( echo $mpilib \| cut -c1-3 ) = mpt ]]
3231	then
3232	# export MPI_LAUNCH_TIMEOUT=360
3233	mpiexec_mpt -np $ii ./a.out $ROPTS < runfile_atmos
3234	elif [[ $( echo $mpilib \| cut -c1-3 ) = mva ]]
3235	then
3236	# ulimit -s 300000 # A too large stack size causes problems
3237	# export MV2_NUM_PORTS=2
3238	# export MV2_CPU_MAPPING=0:1:2:3
3239	mpiexec ./a.out $ROPTS < runfile_atmos
3240	fi
3241
3242	elif [[ $host = lcxt4 ]]
3243	then
3244
3245	aprun -n $ii -N $tasks_per_node a.out < runfile_atmos $ROPTS
3246
3247	fi
3248	wait
3249	fi
3250
3251	# if [[ $scirocco = true ]]
3252	# then
3253	# mpiexec -machinefile hostfile -n $ii a.out $ROPTS
3254	# else
3255	# mpirun -machinefile hostfile -np $ii a.out $ROPTS
3256	# fi
3257	fi
3258	elif [[ $host = decalpha ]]
3259	then
3260	dmpirun -np $numprocs a.out $ROPTS
3261	elif [[ $host = lctit ]]
3262	then
3263	export runfile=runfile.$kennung
3264
3265	echo "cd $PWD" > $runfile
3266	echo "export OMP_NUM_THREADS=$OMP_NUM_THREADS" >> $runfile
3267	echo "export cpurest=$cpurest" >> $runfile
3268	echo "export fname=$fname" >> $runfile
3269	echo "export localhost=$localhost" >> $runfile
3270	echo "export return_addres=$return_addres" >> $runfile
3271	echo "export return_username=$return_username" >> $runfile
3272	echo "export tasks_per_node=$tasks_per_node" >> $runfile
3273	echo "export write_binary=$write_binary" >> $runfile
3274	echo "export use_seperate_pe_for_dvrp_output=$use_seperate_pe_for_dvrp_output" >> $runfile
3275	echo "./a.out" >> $runfile
3276	chmod u+x $runfile
3277
3278	if [[ "$QUEUE" = interactive ]]
3279	then
3280	mpirun -np $numprocs a.out $ROPTS
3281	else
3282	(( mem_tsubame = $memory / 1024.0 ))
3283	echo "Memory for Tsubame for each process in GB:", $mem_tsubame
3284	# n1ge -fore -g 1S060156 -mpi $numprocs -mem 4 -N palm -q $queue a.out $ROPTS
3285	# /n1ge/TITECH_GRID/tools/bin/n1ge -fore -g $group_number -mpi ${numprocs}:$tasks_per_node -mem $mem_tsubame -N palm -rt $minuten -q $queue a.out $ROPTS
3286	n1ge -fore -g $group_number -mpi ${numprocs}:$tasks_per_node -mem $mem_tsubame -N palm -rt $minuten -q $queue a.out $ROPTS
3287	fi
3288
3289	rm $runfile
3290	else
3291	mpprun -n $numprocs a.out $ROPTS
3292	fi
3293	[[ $? != 0 ]] && execution_error=true
3294
3295
3296	# PERFORMANCE-AUSWERTUNG MIT APPRENTICE
3297	if [[ "$cond1" = apprentice \|\| "$cond2" = apprentice ]]
3298	then
3299	apprentice
3300	fi
3301	else
3302	a.out $ROPTS
3303	fi
3304	fi
3305	if [[ $? != 0 \|\| $execution_error = true ]]
3306	then
3307
3308	# ABBRUCH BEI LAUFZEITFEHLER
3309	# [[ ! ( "$cond1" = debug \|\| "$cond2" = debug ) ]] && cat aout_output*
3310	printf "\n +++ runtime error occured"
3311	locat=execution
3312	exit
3313	else
3314	# [[ ! ( "$cond1" = debug \|\| "$cond2" = debug ) ]] && cat aout_output*
3315	printf "\n$striche\n *** execution finished \n"
3316
3317	# Stop the dvr streaming server and process the dvr output in order
3318	# to create dvrs- and html-files containing all streams
3319	if [[ "$dvrserver_id" != "" ]]
3320	then
3321	kill $dvrserver_id
3322	printf "\n *** dvr server with id=$dvrserver_id has been stopped"
3323
3324	# If there is a directory, data have been output by the
3325	# streaming server. Otherwise, user has chosen dvrp_output=local
3326	if [[ -d DATA_DVR ]]
3327	then
3328
3329	# Add the current dvr configuration file to the dvr output
3330	# directory
3331	cp .dvrserver.config DATA_DVR
3332
3333	# Process the dvr output (option -s for also generating
3334	# sequence mode data)
3335	process_dvr_output -d DATA_DVR -f $fname -s
3336
3337	else
3338
3339	# Process the local output
3340	process_dvr_output -l -d DATA_DVR -f $fname
3341
3342	fi
3343
3344	elif [[ $(echo $package_list \| grep -c dvrp_graphics) != 0 ]]
3345	then
3346
3347	# Process dvr output generated in local mode (dvrp_output=local)
3348	process_dvr_output -l -d DATA_DVR -f $fname
3349
3350	fi
3351	fi
3352
3353
3354
3355	# EVENTUELLE OUTPUT-KOMMANDOS ABARBEITEN
3356	(( i = 0 ))
3357	while (( i < ioc ))
3358	do
3359	(( i = i + 1 ))
3360	if (( i == 1 ))
3361	then
3362	printf "\n\n *** execution of OUTPUT-commands:\n$striche"
3363	fi
3364	printf "\n >>> ${out_command[$i]}"
3365	eval ${out_command[$i]}
3366	if (( i == ioc ))
3367	then
3368	printf "\n$striche\n"
3369	fi
3370	done
3371
3372
3373	# EVTL. INHALT DES AKTUELLEN VERZEICHNISSES AUSGEBEN
3374	if [[ $do_trace = true ]]
3375	then
3376	printf "\n\n"
3377	ls -al
3378	fi
3379
3380
3381
3382	# OUTPUT-DATEIEN AN IHRE ZIELORTE KOPIEREN
3383	(( i = 0 ))
3384	while (( i < iout ))
3385	do
3386	(( i = i + 1 ))
3387	if (( i == 1 ))
3388	then
3389	printf "\n\n *** saving OUTPUT-files:\n$striche"
3390	fi
3391
3392	# PRUEFEN, OB EINZELDATEI ODER DATEI PRO PROZESSOR
3393	files_for_pes=false; filetyp=file
3394	if [[ "${actionout[$i]}" = pe && -n $numprocs ]]
3395	then
3396	files_for_pes=true; filetyp=directory
3397	actionout[$i]=""
3398	elif [[ "${actionout[$i]}" = pe && ! -n $numprocs ]]
3399	then
3400	actionout[$i]=""
3401	elif [[ "${actionout[$i]}" = arpe && -n $numprocs ]]
3402	then
3403	files_for_pes=true; filetyp=directory
3404	actionout[$i]="ar"
3405	elif [[ "${actionout[$i]}" = arpe && ! -n $numprocs ]]
3406	then
3407	actionout[$i]="ar"
3408	elif [[ "${actionout[$i]}" = flpe && -n $numprocs ]]
3409	then
3410	files_for_pes=true; filetyp=directory
3411	actionout[$i]="fl"
3412	elif [[ "${actionout[$i]}" = flpe && ! -n $numprocs ]]
3413	then
3414	actionout[$i]="fl"
3415	elif [[ "${actionout[$i]}" = trpe && -n $numprocs ]]
3416	then
3417	files_for_pes=true; filetyp=directory
3418	actionout[$i]="tr"
3419	elif [[ "${actionout[$i]}" = trpe && ! -n $numprocs ]]
3420	then
3421	actionout[$i]="tr"
3422	fi
3423
3424	if [[ ! -f ${localout[$i]} && $files_for_pes = false ]]
3425	then
3426	printf "\n +++ temporary OUTPUT-file ${localout[$i]} does not exist\n"
3427	elif [[ ! -d ${localout[$i]} && $files_for_pes = true ]]
3428	then
3429	printf "\n +++ temporary OUTPUT-file ${localout[$i]}/.... does not exist\n"
3430	else
3431
3432
3433	# KOPIEREN PER FTP/SCP (IMMER IM BINAERMODUS, -M: FALLS ZIELKATALOG
3434	# NICHT VORHANDEN, WIRD VERSUCHT, IHN ANZULEGEN), ABER NUR BEI
3435	# REMOTE-RECHNUNGEN
3436	if [[ "${actionout[$i]}" = tr ]]
3437	then
3438	if [[ $localhost != $fromhost ]]
3439	then
3440	if [[ $files_for_pes = false ]]
3441	then
3442	cps=""
3443	cst=""
3444	else
3445	cps=-c
3446	cst="/"
3447	fi
3448	if [[ $localhost = ibmb \|\| $localhost = nech ]]
3449	then
3450
3451	# TRANSFER IN EIGENSTAENDIGEM JOB
3452	# ZUERST KOPIE DER DATEI INS TEMPORAERE DATENVERZEICHNIS
3453	[[ ! -d $tmp_data_catalog/TRANSFER ]] && mkdir -p $tmp_data_catalog/TRANSFER
3454	file_to_transfer=${fname}_${localout[$i]}_to_transfer_$kennung
3455	if [[ $files_for_pes = false ]]
3456	then
3457	ln -f ${localout[$i]} $tmp_data_catalog/TRANSFER/$file_to_transfer
3458	else
3459	mkdir $tmp_data_catalog/TRANSFER/$file_to_transfer
3460	ln ${localout[$i]}/* $tmp_data_catalog/TRANSFER/$file_to_transfer
3461	fi
3462
3463	echo "set -x" > transfer_${localout[$i]}
3464	echo "cd $tmp_data_catalog/TRANSFER" >> transfer_${localout[$i]}
3465
3466	printf "\n >>> OUTPUT: ${localout[$i]}$cst by SCP in seperate job to"
3467	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}$cst"
3468	printf "\n or higher cycle\n"
3469	echo "batch_scp $cps -b -m -u $return_username $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
3470
3471	echo "[[ \$? = 0 ]] && rm $file_to_transfer" >> transfer_${localout[$i]}
3472
3473	if [[ $localhost = nech ]]
3474	then
3475	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 900 transfer_${localout[$i]}
3476	else
3477	if [[ "$LOGNAME" = b323013 ]]
3478	then
3479	subjob -v -q c1 -X 0 -m 1000 -t 900 -c $job_catalog transfer_${localout[$i]}
3480	else
3481	subjob -d -v -q c1 -X 0 -m 1000 -t 900 -c $job_catalog transfer_${localout[$i]}
3482	fi
3483	fi
3484
3485	else
3486
3487	# TRANSFER INNERHALB DIESES JOBS
3488	transfer_failed=false
3489	printf "\n >>> OUTPUT: ${localout[$i]}$cst by SCP to"
3490	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}$cst\n"
3491	batch_scp $cps -b -m -u $return_username $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
3492	[[ $? != 0 ]] && transfer_failed=true
3493
3494	# BEI FEHLGESCHLAGENEM TRANSFER SICHERUNGSKOPIE AUF
3495	# LOKALER MASCHINE ANLEGEN
3496	if [[ $transfer_failed = true ]]
3497	then
3498	printf " +++ transfer failed. Trying to save a copy on the local host under:\n"
3499	printf " ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung\n"
3500
3501	# ERSTMAL PRUEFEN, OB VERZEICHNIS EXISTIERT. GEGEBENENFALLS
3502	# ANLEGEN.
3503	eval local_catalog=${pathout[$i]}
3504	if [[ ! -d $local_catalog ]]
3505	then
3506	printf " *** local directory does not exist. Trying to create:\n"
3507	printf " $local_catalog \n"
3508	mkdir -p $local_catalog
3509	fi
3510	eval cp ${localout[$i]} ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung
3511	transfer_problems=true
3512	fi
3513	fi
3514	else
3515
3516	# WERTZUWEISUNG, SO DASS WEITER UNTEN NUR KOPIERT WIRD
3517	actionout[$i]=""
3518	fi
3519	fi
3520
3521
3522	# APPEND PER FTP/SCP (IMMER IM BINAERMODUS, -M: FALLS ZIELKATALOG
3523	# NICHT VORHANDEN, WIRD VERSUCHT, IHN ANZULEGEN), ABER NUR BEI
3524	# REMOTE-RECHNUNGEN
3525	if [[ "${actionout[$i]}" = tra ]]
3526	then
3527	if [[ $localhost != $fromhost ]]
3528	then
3529	if [[ $localhost = ibmh \|\| $localhost = ibmb \|\| $localhost = nech ]]
3530	then
3531
3532	# TRANSFER IN EIGENSTAENDIGEM JOB
3533	# ZUERST KOPIE DER DATEI INS TEMPORAERE DATENVERZEICHNIS
3534	[[ ! -d $tmp_data_catalog/TRANSFER ]] && mkdir -p $tmp_data_catalog/TRANSFER
3535	file_to_transfer=${fname}_${localout[$i]}_to_transfer_$kennung
3536	ln -f ${localout[$i]} $tmp_data_catalog/TRANSFER/$file_to_transfer
3537
3538	echo "set -x" > transfer_${localout[$i]}
3539	echo "cd $tmp_data_catalog/TRANSFER" >> transfer_${localout[$i]}
3540
3541	printf "\n >>> OUTPUT: ${localout[$i]} append by SCP in seperate job to"
3542	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}"
3543	printf "\n or higher cycle\n"
3544	echo "batch_scp -A -b -m -u $return_username $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
3545
3546	echo "[[ \$? = 0 ]] && rm $file_to_transfer" >> transfer_${localout[$i]}
3547
3548	if [[ $localhost = nech ]]
3549	then
3550	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 900 transfer_${localout[$i]}
3551	else
3552	if [[ $LOGNAME = b323013 ]]
3553	then
3554	subjob -v -q c1 -X 0 -m 1000 -t 900 -c $job_catalog transfer_${localout[$i]}
3555	else
3556	subjob -d -v -q c1 -X 0 -m 1000 -t 900 -c $job_catalog transfer_${localout[$i]}
3557	fi
3558	fi
3559
3560	else
3561
3562	# TRANSFER INNERHALB DIESES JOBS
3563	transfer_failed=false
3564	printf "\n >>> OUTPUT: ${localout[$i]} append by SCP to"
3565	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}\n"
3566	batch_scp -A -b -m -u $return_username $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
3567	[[ $? != 0 ]] && transfer_failed=true
3568
3569	# BEI FEHLGESCHLAGENEM TRANSFER SICHERUNGSKOPIE AUF
3570	# LOKALER MASCHINE ANLEGEN
3571	if [[ $transfer_failed = true ]]
3572	then
3573	printf " +++ transfer failed. Trying to save a copy on the local host under:\n"
3574	printf " ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung\n"
3575
3576	# ERSTMAL PRUEFEN, OB VERZEICHNIS EXISTIERT. GEGEBENENFALLS
3577	# ANLEGEN
3578	eval local_catalog=${pathout[$i]}
3579	if [[ ! -d $local_catalog ]]
3580	then
3581	printf " *** local directory does not exist. Trying to create:\n"
3582	printf " $local_catalog \n"
3583	mkdir -p $local_catalog
3584	fi
3585
3586	eval cp ${localout[$i]} ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung
3587	transfer_problems=true
3588	fi
3589	fi
3590	else
3591
3592	# WERTZUWEISUNG, SO DASS WEITER UNTEN NUR APPEND AUF
3593	# LOKALER MASCHINE DURCHGEFUEHRT WIRD
3594	actionout[$i]=a
3595	fi
3596	fi
3597
3598
3599	# OUTPUT-DATEI FUER EINEN FORTSETZUNGSLAUF. DATEI WIRD PER
3600	# LINK AUF DEN TEMPORAEREN DATENKATALOG GELEGT. OPTION -f WIRD
3601	# VERWENDET, FALLS DORT NOCH EINE DATEI GLEICHEN NAMENS VORHANDEN
3602	# SEIN SOLLTE. ANSCHLIESSEND WIRD SEINE ARCHIVIERUNG ANGESTOSSEN
3603	if [[ "${actionout[$i]}" = fl ]]
3604	then
3605	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
3606	chmod g+rx $tmp_data_catalog
3607	if [[ $files_for_pes = false ]]
3608	then
3609	printf "\n >>> OUTPUT: ${localout[$i]} to"
3610	printf "\n $tmp_data_catalog/${frelout[$i]} (temporary data catalog)\n"
3611	ln -f ${localout[$i]} $tmp_data_catalog/${frelout[$i]}
3612	else
3613	printf "\n >>> OUTPUT: ${localout[$i]}/.... to"
3614	printf "\n $tmp_data_catalog/${frelout[$i]} (temporary data catalog)\n"
3615	mkdir $tmp_data_catalog/${frelout[$i]}
3616	cd ${localout[$i]}
3617	for file in $(ls *)
3618	do
3619	ln -f $file $tmp_data_catalog/${frelout[$i]}
3620	done
3621	cd $TEMPDIR
3622	fi
3623
3624
3625	# ARCHIVIERUNGSJOB WIRD ERZEUGT UND ABGESCHICKT
3626	if [[ $store_on_archive_system = true ]]
3627	then
3628
3629	if [[ $archive_system = asterix ]]
3630	then
3631	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3632	if [[ $files_for_pes = false ]]
3633	then
3634	echo "stageout ${frelout[$i]} > STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3635	else
3636	echo "stageout -t ${frelout[$i]} > STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3637	fi
3638	echo "cat STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3639	echo "if [[ \$(grep -c \"st.msg:150\" STAGE_OUTPUT${i}_$kennung) != 0 ]]" >> archive_${frelout[$i]}
3640	echo "then" >> archive_${frelout[$i]}
3641	echo " do_stageout=false" >> archive_${frelout[$i]}
3642	echo "else" >> archive_${frelout[$i]}
3643	echo " echo \" +++ $filetyp ${frelout[$i]} could not be stored on archive-system\" " >> archive_${frelout[$i]}
3644	echo " cat /dev/null > ~/job_queue/ARCHIVE_ERROR_$fname" >> archive_${frelout[$i]}
3645	echo " cat STAGE_OUTPUT${i}_$kennung > ~/job_queue/archive_${frelout[$i]}_error" >> archive_${frelout[$i]}
3646	echo " echo \" *** $filetyp ${frelout[$i]} will be copied to \$WORK as backup\" " >> archive_${frelout[$i]}
3647	if [[ $files_for_pes = false ]]
3648	then
3649	echo " cp ${frelout[$i]} \$WORK" >> archive_${frelout[$i]}
3650	else
3651	echo " cp -r ${frelout[$i]} \$WORK/${frelout[$i]}" >> archive_${frelout[$i]}
3652	fi
3653	echo " echo \" *** $filetyp ${frelout[$i]} saved\" " >> archive_${frelout[$i]}
3654	echo "fi" >> archive_${frelout[$i]}
3655	echo "rm STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3656	elif [[ $archive_system = DMF ]]
3657	then
3658	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3659	if [[ $files_for_pes = false ]]
3660	then
3661	printf "\n +++ archiving of single files impossible with $archive_system !\n"
3662	locat=DMF
3663	exit
3664	else
3665	# FUER RECHNER IN JUELICH. DORT KOENNTEN AUCH
3666	# EINZELNE DATEIEN GESICHERT WERDEN (SPAETER KORR.)
3667	echo "rm -rf \$ARCHIVE/${frelout[$i]}" >> archive_${frelout[$i]}
3668	echo "cp -r ${frelout[$i]} \$ARCHIVE" >> archive_${frelout[$i]}
3669	fi
3670	elif [[ $archive_system = tivoli ]]
3671	then
3672	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3673	if [[ $files_for_pes = false ]]
3674	then
3675	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3676	echo "set -x" >> archive_${frelout[$i]}
3677	echo "rm -rf \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3678	echo "cp ${frelout[$i]} \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3679	else
3680
3681	echo "set -x" >> archive_${frelout[$i]}
3682	echo "rm -rf \$PERM/${frelout[$i]}/*" >> archive_${frelout[$i]}
3683	echo "[[ ! -d \$PERM/${frelout[$i]} ]] && mkdir $PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3684	cd $tmp_data_catalog
3685	all_files=`ls -1 ${frelout[$i]}/*`
3686	cd - > /dev/null
3687	(( inode = 0 ))
3688	(( tp1 = tasks_per_node + 1 ))
3689	while (( inode < nodes ))
3690	do
3691	# echo "*** all_files = \"$all_files\" "
3692	files=`echo $all_files \| cut -d" " -f1-$tasks_per_node`
3693	all_files=`echo $all_files \| cut -d" " -f$tp1-`
3694	# echo "*** tasks_per_node = \"$tasks_per_node\" "
3695	# echo "*** files = \"$files\" "
3696	# echo "*** all_files = \"$all_files\" "
3697	echo "tar cvf \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar $files" >> archive_${frelout[$i]}
3698	echo "dsmc incremental \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar" >> archive_${frelout[$i]}
3699	echo "dsmmigrate \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar" >> archive_${frelout[$i]}
3700	(( inode = inode + 1 ))
3701	done
3702	# echo "rm -rf \$PERM/${frelout[$i]}.tar" >> archive_${frelout[$i]}
3703	# echo "tar cvf \$PERM/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
3704	fi
3705	elif [[ $archive_system = ut ]]
3706	then
3707	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3708	if [[ $files_for_pes = false ]]
3709	then
3710	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3711	echo "set -x" >> archive_${frelout[$i]}
3712	echo "rm -rf \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3713	echo "cp ${frelout[$i]} \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3714	else
3715
3716	echo "set -x" >> archive_${frelout[$i]}
3717	echo "rm -rf \$UT/${frelout[$i]}/*" >> archive_${frelout[$i]}
3718	echo "[[ ! -d \$UT/${frelout[$i]} ]] && mkdir $UT/${frelout[$i]}" >> archive_${frelout[$i]}
3719	cd $tmp_data_catalog
3720	all_files=`ls -1 ${frelout[$i]}/*`
3721	cd - > /dev/null
3722	(( inode = 0 ))
3723	(( tp1 = tasks_per_node + 1 ))
3724	while (( inode < nodes ))
3725	do
3726	files=`echo $all_files \| cut -d" " -f1-$tasks_per_node`
3727	all_files=`echo $all_files \| cut -d" " -f$tp1-`
3728	echo "tar cvf \$UT/${frelout[$i]}/${frelout[$i]}.node_$inode.tar $files" >> archive_${frelout[$i]}
3729	(( inode = inode + 1 ))
3730	done
3731	fi
3732	elif [[ $archive_system = none ]]
3733	then
3734	printf " +++ archiving on $localhost not available!\n"
3735	fi
3736
3737	if [[ $archive_system != none ]]
3738	then
3739	if [[ $localhost = ibmh \|\| $localhost = ibmb ]]
3740	then
3741	# subjob -d -v -q cdata -X 0 -m 1000 -t 43200 -c $job_catalog archive_${frelout[$i]}
3742	subjob -v -q cdata -X 0 -m 1000 -t 43200 -c $job_catalog archive_${frelout[$i]}
3743	elif [[ $localhost = nech ]]
3744	then
3745	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 7200 archive_${frelout[$i]}
3746	fi
3747	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
3748	fi
3749	else
3750	printf " +++ caution: option -A is switched on. No archiving on $archive_system!\n"
3751	fi
3752
3753
3754	# LEERDATEI IM BENUTZERVERZEICHNIS ANLEGEN, DAMIT BEKANNT IST,
3755	# WIE DIE HOECHSTE ZYKLUSNUMMER AUF DEM ARCHIV-SYSTEM LAUTET
3756	if [[ $files_for_pes = false ]]
3757	then
3758	cat /dev/null > ${pathout[$i]}
3759	else
3760	mkdir -p ${pathout[$i]}
3761	fi
3762
3763	fi
3764
3765
3766	# KOPIEREN AUF LOKALER MASCHINE ZUM ARCHIV-SYSTEM
3767	# AUSSERDEM MUSS LEERDATEI ANGELEGT WERDEN, DAMIT BEKANNT IST,
3768	# WIE DIE HOECHSTE ZYKLUSNUMMER AUF DEM ARCHIV-SYSTEM LAUTET
3769	# FALLS IRGENDEINE (VON MEHREREN) ARCHIVIERUNGEN SCHIEF GEHT,
3770	# WIRD FLAG GESETZT UND BLEIBT AUCH BEI WEITEREN ORDNUNGS-
3771	# GEMAESSEN ARCHIVIERUNGEN GESETZT
3772	if [[ "${actionout[$i]}" = ar ]]
3773	then
3774	if [[ $files_for_pes = false ]]
3775	then
3776	printf "\n >>> OUTPUT: ${localout[$i]} to"
3777	printf "\n ${pathout[$i]}"
3778	printf "\n File will be copied to archive-system ($archive_system) !\n"
3779	else
3780	printf "\n >>> OUTPUT: ${localout[$i]}/_.... to"
3781	printf "\n ${pathout[$i]}"
3782	printf "\n Directory will be copied to archive-system ($archive_system) !\n"
3783	fi
3784	mv ${localout[$i]} ${frelout[$i]}
3785
3786	file_saved=false
3787
3788	if [[ $archive_system = asterix ]]
3789	then
3790	do_stageout=true
3791	(( stageout_anz = 0 ))
3792	while [[ $do_stageout = true ]]
3793	do
3794	if [[ $files_for_pes = false ]]
3795	then
3796	stageout ${frelout[$i]} > STAGE_OUTPUT
3797	else
3798	stageout -t ${frelout[$i]} > STAGE_OUTPUT
3799	fi
3800	cat STAGE_OUTPUT
3801	if [[ $(grep -c "st.msg:150" STAGE_OUTPUT) != 0 ]]
3802	then
3803	file_saved=true
3804	do_stageout=false
3805	else
3806	if [[ $files_for_pes = false ]]
3807	then
3808	printf "\n +++ file ${frelout[$i]} could not be saved on archive-system"
3809	else
3810	printf "\n +++ directory ${frelout[$i]} could not be saved on archive-system"
3811	fi
3812	(( stageout_anz = stageout_anz + 1 ))
3813	if (( stageout_anz == 10 ))
3814	then
3815	printf "\n +++ stoped after 10 unsuccessful tries!"
3816	archive_save=false
3817	do_stageout=false
3818	else
3819	printf "\n *** new try to store on archive after 15 min:"
3820	sleep 900
3821	fi
3822	fi
3823	done
3824	elif [[ $archive_system = DMF ]]
3825	then
3826	if [[ $files_for_pes = false ]]
3827	then
3828	printf "\n +++ archiving of single files impossible on $archive_system!\n"
3829	locat=DMF
3830	exit
3831	else
3832	rm -rf $ARCHIVE/${frelout[$i]}
3833	cp -r ${frelout[$i]} $ARCHIVE
3834	fi
3835	file_saved=true
3836	elif [[ $archive_system = tivoli ]]
3837	then
3838	# ARCHIVIERUNG NUR PER BATCH-JOB MOEGLICH
3839	# DATEI MUSS ZWISCHENZEITLICH INS TEMPORAERE DATENVERZEICHNIS
3840	# GELEGT WERDEN
3841	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
3842	chmod g+rx $tmp_data_catalog
3843	if [[ $files_for_pes = false ]]
3844	then
3845	ln -f ${frelout[$i]} $tmp_data_catalog/${frelout[$i]}
3846	else
3847	mkdir $tmp_data_catalog/${frelout[$i]}
3848	ln -f ${frelout[$i]}/* $tmp_data_catalog/${frelout[$i]}
3849	fi
3850
3851	# BATCH JOB GENERIEREN UND ABSCHICKEN; DATEI MUSS WIEDER
3852	# AUS TEMPORAEREM DATENVERZEICHNIS ENTFERNT WERDEN
3853	echo "cd $tmp_data_catalog" > archive_${frelout[$i]}
3854	if [[ $files_for_pes = false ]]
3855	then
3856	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3857	echo "rm -rf \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3858	echo "cp ${frelout[$i]} \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3859	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3860	else
3861	echo "rm -rf \$PERM/${frelout[$i]}.tar" >> archive_${frelout[$i]}
3862	echo "tar cvf \$PERM/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
3863	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3864	fi
3865
3866	subjob -v -d -q cdata -X 0 -m 1000 -t 43200 -c $job_catalog archive_${frelout[$i]}
3867	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
3868	file_saved=true
3869
3870	elif [[ $archive_system = ut ]]
3871	then
3872	# ARCHIVIERUNG NUR PER BATCH-JOB MOEGLICH
3873	# DATEI MUSS ZWISCHENZEITLICH INS TEMPORAERE DATENVERZEICHNIS
3874	# GELEGT WERDEN
3875	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
3876	chmod g+rx $tmp_data_catalog
3877	if [[ $files_for_pes = false ]]
3878	then
3879	ln -f ${frelout[$i]} $tmp_data_catalog/${frelout[$i]}
3880	else
3881	mkdir $tmp_data_catalog/${frelout[$i]}
3882	ln -f ${frelout[$i]}/* $tmp_data_catalog/${frelout[$i]}
3883	fi
3884
3885	# BATCH JOB GENERIEREN UND ABSCHICKEN; DATEI MUSS WIEDER
3886	# AUS TEMPORAEREM DATENVERZEICHNIS ENTFERNT WERDEN
3887	echo "cd $tmp_data_catalog" > archive_${frelout[$i]}
3888	if [[ $files_for_pes = false ]]
3889	then
3890	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3891	echo "rm -rf \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3892	echo "cp ${frelout[$i]} \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3893	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3894	else
3895	echo "rm -rf \$UT/${frelout[$i]}.tar" >> archive_${frelout[$i]}
3896	echo "tar cvf \$UT/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
3897	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3898	fi
3899
3900	subjob -v -c /pf/b/$usern/job_queue -d -q pp -X 0 -m 1000 -t 7200 archive_${frelout[$i]}
3901	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
3902	file_saved=true
3903
3904	else
3905	printf "\n +++ archive_system=\"$archive_system\" archiving impossible!"
3906	archive_save=false
3907	fi
3908	if [[ $file_saved = true ]]
3909	then
3910	if [[ $files_for_pes = false ]]
3911	then
3912	cat /dev/null > ${pathout[$i]}
3913	else
3914	mkdir -p ${pathout[$i]}
3915	fi
3916	fi
3917	fi
3918
3919	# APPEND AUF LOKALER MASCHINE
3920	if [[ "${actionout[$i]}" = "a" ]]
3921	then
3922	printf "\n >>> OUTPUT: ${localout[$i]} append to ${pathout[$i]}\n"
3923	cat ${localout[$i]} >> ${pathout[$i]}
3924	fi
3925
3926	# KOPIEREN AUF LOKALER MASCHINE
3927	# ES MUSS KOPIERT WERDEN, DA MOVE NICHT UEBER FILESYSTEM HINAUS MOEGLICH
3928	if [[ "${actionout[$i]}" = "" && $files_for_pes = false ]]
3929	then
3930
3931	# KOPIEREN AUF EINPROZESSORMASCHINE
3932	if [[ "${extout[$i]}" != " " && "${extout[$i]}" != "" ]]
3933	then
3934	printf "\n >>> OUTPUT: ${localout[$i]} to ${pathout[$i]}.${extout[$i]}\n"
3935	if [[ $link_local_output = true ]]
3936	then
3937	printf " using ln -f\n"
3938	ln -f ${localout[$i]} ${pathout[$i]}.${extout[$i]}
3939	fi
3940	# If "ln -f" fails of if "$link_local_output = false" do a normal "cp"
3941	if [[ ! -f "${pathout[$i]}.${extout[$i]}" ]]
3942	then
3943	if [[ $link_local_output = true ]]
3944	then
3945	printf " ln failed, using cp...\n"
3946	fi
3947	cp ${localout[$i]} ${pathout[$i]}.${extout[$i]}
3948	fi
3949	else
3950	printf "\n >>> OUTPUT: ${localout[$i]} to ${pathout[$i]}\n"
3951	if [[ $link_local_output = true ]]
3952	then
3953	printf " using ln -f\n"
3954	ln -f ${localout[$i]} ${pathout[$i]}
3955	fi
3956	# If "ln -f" fails of if "$link_local_output = false" do a normal "cp"
3957	if [[ ! -f "${pathout[$i]}" ]]
3958	then
3959	if [[ $link_local_output = true ]]
3960	then
3961	printf " ln failed, using cp...\n"
3962	fi
3963	cp ${localout[$i]} ${pathout[$i]}
3964	fi
3965	fi
3966
3967	elif [[ "${actionout[$i]}" = "" && $files_for_pes = true ]]
3968	then
3969
3970	# DIE DEN PROZESSOREN EINES PARALLELRECHNERS ZUGEHOERIGEN
3971	# DATEIEN WERDEN ERST IN EINEM KATALOG GESAMMELT UND DIESER
3972	# WIRD DANN KOPIERT
3973	# PER MOVE UMBENANNT WERDEN
3974	printf "\n >>> OUTPUT: ${localout[$i]}/_.... to ${pathout[$i]}\n"
3975	if [[ $link_local_output = true ]]
3976	then
3977	printf " using ln -f\n"
3978	mkdir ${pathout[$i]}
3979	cd ${localout[$i]}
3980	for file in $(ls *)
3981	do
3982	ln -f $file ${pathout[$i]}
3983	done
3984	cd $TEMPDIR
3985	fi
3986	# If "ln -f" fails of if "$link_local_output = false" do a normal "cp -r"
3987	if [[ ! -f "${pathout[$i]}/_0000" ]]
3988	then
3989	if [[ $link_local_output = true ]]
3990	then
3991	printf " ln failed for .../_0000, using cp...\n"
3992	fi
3993	cp -r ${localout[$i]} ${pathout[$i]}
3994	fi
3995
3996	fi
3997	fi
3998	done
3999	if (( i != 0 ))
4000	then
4001	if [[ $transfer_problems = true ]]
4002	then
4003	printf "\n$striche\n *** OUTPUT-files saved"
4004	printf "\n +++ WARNING: some data transfers failed! \n"
4005	else
4006	printf "\n$striche\n *** all OUTPUT-files saved \n"
4007	fi
4008	fi
4009
4010
4011	# EVENTUELL FOLGEJOB STARTEN
4012	# DATEI CONTINUE_RUN MUSS VOM BENUTZERPROGRAMM AUS ERZEUGT WERDEN
4013	if [[ -f CONTINUE_RUN ]]
4014	then
4015
4016	if [[ $archive_save = true ]]
4017	then
4018
4019	# ZUERST IN MRUN-AUFRUF OPTIONEN FUER FORTSETZUNGSLAUF, FUER
4020	# STILLES ABARBEITEN (OHNE INTERAKTIVE RUECKFAGEN) UND FUER
4021	# BATCH-BETRIEB (NUR WICHTIG, FALLS BATCH AUF LOKALER MASCHINE
4022	# DURCHGEFUEHRT WERDEN SOLL) EINFUEGEN, FALLS NICHT BEREITS VOR-
4023	# HANDEN
4024	[[ $(echo $mc \| grep -c "\-C") = 0 ]] && mc="$mc -C"
4025	[[ $(echo $mc \| grep -c "\-v") = 0 ]] && mc="$mc -v"
4026	[[ $(echo $mc \| grep -c "\-b") = 0 ]] && mc="$mc -b"
4027	if [[ $(echo $mc \| grep -c "#") != 0 ]]
4028	then
4029	mc=`echo $mc \| sed 's/#/f/g'`
4030	fi
4031
4032
4033	# JOB STARTEN
4034	printf "\n\n *** initiating restart-run on \"$return_addres\" using command:\n"
4035	echo " $mc"
4036	printf "\n$striche\n"
4037	if [[ $localhost != $fromhost ]]
4038	then
4039
4040	if [[ $localhost = lcsgih \|\| $localhost = lcsgib \|\| $localhost = nech \|\| $localhost = ibmb \|\| $localhost = ibmh \|\| $localhost = ibms \|\| $localhost = lctit ]]
4041	then
4042	echo "*** ssh will be used to initiate restart-runs!"
4043	echo " return_addres=\"$return_addres\" "
4044	echo " return_username=\"$return_username\" "
4045	if [[ $return_addres = 172.20.25.41 ]]
4046	then
4047	# WORKAROUND AUF SCIROCCO AM TIT
4048	print "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc " \| ssh $return_addres -l $return_username
4049	else
4050	ssh $return_addres -l $return_username "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc "
4051	fi
4052	else
4053	printf "\n +++ no restart mechanism available for host \"$localhost\" "
4054	locat=restart; exit
4055	fi
4056
4057	# WARTEN, DAMIT SICH RESTART JOB IN QUEUE EINREIHEN KANN, BEVOR
4058	# DER AKTUELLE JOB ENDET
4059	sleep 30
4060
4061	else
4062
4063	# BEI RECHNUNGEN AUF LOKALER MASCHINE KANN MRUN DIREKT AUFGE-
4064	# RUFEN WERDEN, AUSSER AUF lcfimm
4065	cd $LOCAL_PWD
4066	if [[ $localhost = lcfimm ]]
4067	then
4068	ssh $return_addres -l $return_username "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc "
4069	else
4070	eval $mc # ' MUESSEN AUSGEWERTET WERDEN
4071	fi
4072	cd - > /dev/null
4073	fi
4074	printf "\n$striche\n *** restart-run initiated \n"
4075
4076
4077	# EVENTUELL INPUT-DATEIEN, DIE VON TEMPORAEREM DATENVERZEICHNIS
4078	# GEHOLT WORDEN SIND, LOESCHEN
4079	(( i = 0 ))
4080	while (( i < iin ))
4081	do
4082	(( i = i + 1 ))
4083	if [[ "${got_tmp[$i]}" = true && $keep_data_from_previous_run = false ]]
4084	then
4085	rm -r $tmp_data_catalog/${frelin[$i]}
4086	fi
4087	done
4088
4089	else
4090
4091	printf "\n +++ no restart-run possible, since errors occured"
4092	printf "\n during the archive process"
4093	fi
4094
4095	fi
4096
4097
4098
4099	# EVTL. EMAIL-BENACHRICHTIGUNG UEBER ABGESCHLOSSENEN LAUF
4100	if [[ "$email_notification" != "none" ]]
4101	then
4102
4103	if [[ $localhost != $fromhost ]]
4104	then
4105	if [[ -f CONTINUE_RUN ]]
4106	then
4107	echo "PALM restart run necessary" > email_text
4108	echo "description header of actual run:" >> email_text
4109	cat CONTINUE_RUN >> email_text
4110	echo "mrun-command to restart:" >> email_text
4111	echo "$mc" >> email_text
4112	else
4113	echo "PALM run with base filename \"$fname\" on host \"$localhost\" finished" > email_text
4114	fi
4115	mail $email_notification < email_text
4116	printf "\n *** email notification sent to \"$email_notification\" "
4117	fi
4118	fi
4119
4120
4121
4122	# ALLE ARBEITEN BEENDET. TEMPORAERER KATALOG KANN GELOESCHT WERDEN
4123	cd $HOME
4124	[[ $delete_temporary_catalog = true ]] && rm -rf $TEMPDIR
4125
4126	else
4127
4128
4129	# FALLS AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL, WERDEN JETZT ENTSPRE-
4130	# CHENDE AKTIONEN DURCHGEFUEHRT
4131
4132	# MRUN-BEFEHL FUER REMOTE-MASCHINE ZUSAMMENSTELLEN
4133	mrun_com="$mrun_script_name -a $afname -c $config_file -d $fname -h $host -H $fromhost -m $memory -t $cpumax -q $queue -R $return_addres -U $return_username -u $remote_username"
4134	[[ "$cpp_opts" != "" ]] && mrun_com=${mrun_com}" -D \"$cpp_opts\""
4135	[[ "$global_revision" != "" ]] && mrun_com=${mrun_com}" -G \"$global_revision\""
4136	[[ $group_number != none ]] && mrun_com=${mrun_com}" -g $group_number"
4137	[[ $do_compile = true ]] && mrun_com=${mrun_com}" -s \"$source_list\""
4138	[[ "$input_list" != "" ]] && mrun_com=${mrun_com}" -i \"$input_list\""
4139	[[ $ignore_archive_error = true ]] && mrun_com=${mrun_com}" -I"
4140	[[ $keep_data_from_previous_run = true ]] && mrun_com=${mrun_com}" -k"
4141	[[ "$additional_conditions" != "" ]] && mrun_com=${mrun_com}" -K \"$additional_conditions\""
4142	# [[ "$makefile" != "$source_path/Makefile" ]] && mrun_com=${mrun_com}" -M \"$makefile\""
4143	[[ "$output_list" != "" ]] && mrun_com=${mrun_com}" -o \"$output_list\""
4144	[[ "$read_from_config" = false ]] && mrun_com=${mrun_com}" -S"
4145	[[ $do_trace = true ]] && mrun_com=${mrun_com}" -x"
4146	[[ "$numprocs" != "" ]] && mrun_com=${mrun_com}" -X $numprocs"
4147	if [[ $use_openmp = true ]]
4148	then
4149	mrun_com=${mrun_com}" -O"
4150	[[ "$tasks_per_node" != "" ]] && mrun_com=${mrun_com}" -T $threads_per_task"
4151	else
4152	[[ "$tasks_per_node" != "" ]] && mrun_com=${mrun_com}" -T $tasks_per_node"
4153	fi
4154	[[ $store_on_archive_system = false ]] && mrun_com=${mrun_com}" -A"
4155	[[ $package_list != "" ]] && mrun_com=${mrun_com}" -p \"$package_list\""
4156	[[ $return_password != "" ]] && mrun_com=${mrun_com}" -P $return_password"
4157	[[ $delete_temporary_catalog = false ]] && mrun_com=${mrun_com}" -B"
4158	[[ $node_usage != default && "$(echo $node_usage \| cut -c1-3)" != "sla" && $node_usage != novice ]] && mrun_com=${mrun_com}" -n $node_usage"
4159	[[ "$ocean_file_appendix" = true ]] && mrun_com=${mrun_com}" -y"
4160	[[ $run_coupled_model = true ]] && mrun_com=${mrun_com}" -Y \"$coupled_dist\""
4161	if [[ $do_remote = true ]]
4162	then
4163	printf "\n>>>> MRUN-command on execution host:\n>>>> $mrun_com \n"
4164	fi
4165
4166
4167	# ZUSAMMENSTELLUNG DES JOBSCRIPTS AUF DATEI jobfile
4168	jobfile=jobfile.$RANDOM
4169
4170
4171	# TEMPORAERES VERZEICHNIS GENERIEREN UND NACH DORT WECHSELN
4172	echo "mkdir $TEMPDIR" >> $jobfile
4173	echo "cd $TEMPDIR" >> $jobfile
4174
4175
4176	# EVENTUELL FEHLERVERFOLGUNG AKTIVIEREN
4177	if [[ $do_trace = true ]]
4178	then
4179	echo "set -x" >> $jobfile
4180	else
4181	echo "set +vx" >> $jobfile
4182	fi
4183
4184
4185	# BEREITSTELLUNG VON QUELLTEXTEN, MRUN-SCRIPTS UND KONFIGURATIONS-
4186	# DATEI FUER DEN JOB
4187	if [[ $( echo $host \| cut -c1-5 ) = lcsgi ]]
4188	then
4189
4190	# KONFIGURATIONSDATEI UND MRUN_SCRIPT IN DAS SOURCE-VERZEICHNIS
4191	# KOPIEREN
4192	if [[ $restart_run != true ]]
4193	then
4194	cp $config_file $working_directory/SOURCES_FOR_RUN_$fname
4195	cp ${PALM_BIN}/$mrun_script_name $working_directory/SOURCES_FOR_RUN_$fname
4196	fi
4197
4198	# SOURCE-VERZEICHNIS VOM LOKALEN RECHNER PER SCP TRANSFERIEREN
4199	echo "set -x" >> $jobfile
4200	echo "scp -r $return_username@$return_addres:$working_directory/SOURCES_FOR_RUN_$fname ." >> $jobfile
4201	echo "export SOURCES_COMPLETE=true" >> $jobfile
4202
4203	# QUELLTEXTE, MRUN-SCRIPT UND KONFIGURATIONSDATEI IN DAS AKTUELLE
4204	# ARBEITSVERZEICHNIS VERSCHIEBEN
4205	echo "mv SOURCES_FOR_RUN_$fname/$config_file . " >> $jobfile
4206	echo "mv SOURCES_FOR_RUN_$fname/$mrun_script_name . " >> $jobfile
4207	echo "execute_mrun=true" >> $jobfile
4208	echo " " >> $jobfile
4209
4210	else
4211
4212	# ABSPEICHERN DER QUELLTEXTE (NUR FALLS UEBERSETZT WERDEN SOLL)
4213	# SOWIE GEGEBENENFALLS DES MAKEFILES
4214	if [[ $do_compile = true ]]
4215	then
4216
4217	source_catalog=SOURCES_FOR_RUN_$fname
4218
4219	# UNTERVERZEICHNIS FUER QUELLTEXTE UND MAKEFILE ANLEGEN
4220	# MRUN WIRD DIESES VRZEICHNIS UEBER ENVIRONMENT VARIABLE
4221	# MITGETEILT (UEBERSTEUERT ANGABE IN KONFIGURATIONSDATEI)
4222	echo "mkdir SOURCES_FOR_RUN_$fname" >> $jobfile
4223	echo "export SOURCES_COMPLETE=true" >> $jobfile
4224	echo "cd SOURCES_FOR_RUN_$fname" >> $jobfile
4225
4226	for filename in $source_list
4227	do
4228	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
4229	echo "cat > $filename << \"%END%\"" >> $jobfile
4230	cat $source_catalog/$filename >> $jobfile
4231	echo " " >> $jobfile
4232	echo "%END%" >> $jobfile
4233	echo " " >> $jobfile
4234	done
4235
4236	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
4237	echo "cat > Makefile << \"%END%\"" >> $jobfile
4238	cat $source_catalog/Makefile >> $jobfile
4239	echo " " >> $jobfile
4240	echo "%END%" >> $jobfile
4241	echo " " >> $jobfile
4242
4243	echo "cd - > /dev/null" >> $jobfile
4244
4245	fi
4246
4247
4248	# ABSPEICHERN DER KONFIGURATIONSDATEI
4249	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
4250	echo "cat > $config_file << \"%END%\"" >> $jobfile
4251	cat $config_file >> $jobfile
4252	echo "%END%" >> $jobfile
4253	echo " " >> $jobfile
4254
4255
4256	# ABSPEICHERN DER AKTUELLEN MRUN-VERSION
4257	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
4258	echo "cat > $mrun_script_name <<\"%END%\"" >> $jobfile
4259	cat ${PALM_BIN}/$mrun_script_name >> $jobfile
4260	echo "%END%" >> $jobfile
4261	if [[ $host = lctit ]]
4262	then
4263	echo "sed 's/bin\/ksh/home2\/usr5\/mkanda\/pub\/ksh/' < $mrun_script_name > mrun_new" >> $jobfile
4264	echo "mv mrun_new $mrun_script_name" >> $jobfile
4265	fi
4266	echo "chmod u+x $mrun_script_name" >> $jobfile
4267	echo "execute_mrun=true" >> $jobfile
4268	echo " " >> $jobfile
4269
4270	fi
4271
4272
4273	# EVTL. BENOETIGTE INPUT-DATEIEN PER FTP HOLEN ODER DEM JOB DIREKT
4274	# MITGEBEN UND AUF DEM REMOTE-RECHNER IM BENUTZERVERZEICHNIS ABLEGEN
4275	# FALLS DIESES NICHT EXISTIERT, WIRD VERSUCHT, DAS JEWEILS LETZTE
4276	# UNTERVERZEICHNIS DES PFADNAMENS ANZULEGEN
4277	if [[ $do_remote = true ]]
4278	then
4279	(( i = 0 ))
4280	while (( i < iin ))
4281	do
4282	(( i = i + 1 ))
4283	echo "[[ ! -d ${pathin[$i]} ]] && mkdir -p ${pathin[$i]}" >> $jobfile
4284	if [[ "${transin[$i]}" = job ]]
4285	then
4286	echo "cat > ${remotepathin[$i]} <<\"%END%\"" >> $jobfile
4287	eval cat ${pathin[$i]}/${frelin[$i]} >> $jobfile
4288	echo " " >> $jobfile
4289	echo "%END%" >> $jobfile
4290	else
4291	echo "batch_scp -b -o -g -s -u $return_username $return_addres ${remotepathin[$i]} \"${pathin[$i]}\" ${frelin[$i]}" >> $jobfile
4292	fi
4293
4294	# UEBERPRUEFEN, OB DATEI ANGELEGT WERDEN KONNTE
4295	echo "if [[ \$? = 1 ]]" >> $jobfile
4296	echo "then" >> $jobfile
4297	echo " echo \" \" " >> $jobfile
4298	echo " echo \"+++ file ${remotepathin[$i]} could not be created\" " >> $jobfile
4299	echo " echo \" please check, if directory exists on $host!\" " >> $jobfile
4300	echo " echo \"+++ MRUN will not be continued\" " >> $jobfile
4301	echo " execute_mrun=false" >> $jobfile
4302	echo "fi" >> $jobfile
4303	done
4304	fi
4305
4306	# ARBEITSKATALOG AUF DER LOKALEN MASCHINE FUER EVENTUELLE
4307	# FORTSETZUNGSLAUEFE PER ENV-VARIABLE UEBERGEBEN
4308	echo "LOCAL_PWD=$working_directory" >> $jobfile
4309	echo "export LOCAL_PWD" >> $jobfile
4310
4311	# EBENSO LOKALEN MRUN-KATALOG UEBERGEBEN
4312	echo "LOCAL_MRUN_PATH=$PALM_BIN" >> $jobfile
4313	echo "export LOCAL_MRUN_PATH" >> $jobfile
4314
4315	# WORKAROUND FUER RIAM-NEC-JOBS WEGEN PROFILE-SCHWIERIGKEITEN
4316	if [[ $localhost_realname = "gate" \|\| $localhost = lctit ]]
4317	then
4318	echo "export PALM_BIN=$PALM_BIN" >> $jobfile
4319	fi
4320
4321	# MRUN AUF ZIELRECHNER AUFRUFEN
4322	echo "set -x" >> $jobfile
4323	echo "[[ \$execute_mrun = true ]] && ./$mrun_com" >> $jobfile
4324
4325	echo 'ls -al; echo `pwd`' >> $jobfile
4326	echo "cd \$HOME" >> $jobfile
4327	echo "rm -rf $TEMPDIR" >> $jobfile
4328
4329
4330
4331
4332	# JOB PER SUBJOB STARTEN
4333	if [[ $silent = false ]]
4334	then
4335	printf "\n "
4336	else
4337	printf "\n\n"
4338	fi
4339
4340	subjob $job_on_file -h $host -u $remote_username -g $group_number -q $queue -m $memory -N $node_usage -t $cpumax $XOPT $TOPT $OOPT -n $fname -v -c $job_catalog -e $email_notification $jobfile
4341	rm -rf $jobfile
4342
4343
4344	fi # ENDE REMOTE-TEIL
4345
4346
4347
4348	# ENDE DER PROZEDUR

Note: See TracBrowser for help on using the repository browser.

Download in other formats:

| Impressum | ©Leibniz Universität Hannover |