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source: palm/trunk/SCRIPTS/mrun @ 61

Last change on this file since 61 was 61, checked in by raasch, 18 years ago
further preliminary changes for revision 3.2
Property svn:keywords set to `Id`
File size: 147.2 KB

Rev	Line
[1]	1	#!/bin/ksh
	2
	3	##!/home/DSRC/NC/tatuyama/pub/ksh NEEDED ON NEC AT RIAM !!!!!!!!!!
	4
[54]	5	# mrun - Plot-Shellskript Version: @(#)MRUN 2.0 07/03/07
	6	# $Id: mrun 61 2007-03-12 05:42:06Z raasch $
[1]	7
	8	# Prozedur zum Starten von Modellaeufen
	9
	10	# letzte Aenderung:
	11	# 03/03/94 - Siggi - Entwicklungsbeginn
	12	# 21/03/94 - Siggi - Entwicklungsabschluss (Version 1.0)
	13	# 09/12/94 - Siggi - allexport unterbunden; statt dessen werden jetzt ein-
	14	# zelne Variable exportiert. Dies ist noetig, weil an-
	15	# sonsten irgendein Speicher ueberlaeuft und von mrun
	16	# aufgerufene Programme (z.B. stageout) mit Fehlern
	17	# abbrechen (too many arguments)
	18	# 20/06/95 - Siggi - noclobber muss explizit abgeschaltet, da jetzt
	19	# defaultmaessig im RRZN-Profile eingeschaltet
	20	# 10/06/97 - Siggi - Zusaetzliche Option -C bei cpp, damit // nicht
	21	# wegfallen
	22	# 25/04/00 - Siggi - Version 1.5
	23	# remote_addres und remote_user in return_addres bzw.
	24	# return_username umbenannt, return_username wird dem
	25	# mrun-Aufruf im Job ueber Option -U mitgegeben.
	26	# Neue Variable remote_username, die beim interaktiven
	27	# mrun-Aufruf zwingend ueber die neue Option -u oder
	28	# in der Konfigurationsdatei angegeben werden muss.
	29	# 08/02/01 - Siggi - Alle mrun-Meldungen ins englische uebersetzt,
	30	# Version 1.7
	31	# 05/05/02 - Siggi - Uebersetzungen mittels make-Mechanismus moeglich
	32	# 21/11/02 - Siggi - ENV-Variable XLFRTEOPTS wird vor Ausfuehrung auf
	33	# IBM gesetzt, um Record-Laenge der NAMELIST-Dateien,
	34	# zu bestimmen; Praeprozessoroptionen haben nun alle
	35	# die Form -Dtext=text, weil auf IBM sonst text durch
	36	# die leere Zeichenkette ersetzt wird
	37	# 01/08/03 - Siggi - Test of implementing dvrp+1PE on ibm
	38	# 07/01/04 - Siggi - additional preprocessor directive for ibm included
	39	# (-D$OMP=OMP) in order to avoid problems with
	40	# OMP_NUM_THREADS
	41	# 04/01/05 - Siggi - archiving on hanni and berni is done in separate
	42	# tar files, one for each node used
	43	# 07/01/04 - Siggi - old code for t3e, vpp and hpcs eliminated
	44	# 09/01/05 - Siggi - workaround for getting the IP address on gfdl3
	45	# 17/01/05 - Siggi - job for data transfer to local machine now within
	46	# job class c1 (HLRN)
	47	# 27/01/05 - Siggi - IP address workaround for gfdl3 removed
	48	# 28/01/05 - Siggi - tar-filenames on $PERM (HLRN) now include the
	49	# base filename and cycle number
	50	# 16/02/05 - Gerald - hababai validated
	51	# 14/03/05 - Siggi - abort on NEC after first runtime error (F_ERRCNT)
	52	# 29/03/05 - Marcus - berni*-en0 validated
	53	# 21/04/05 - Siggi - transfer-job-protocol for avs-data is no more stored
	54	# 24/04/05 - Siggi - netcdf support on lcmuk
	55	# 25/04/05 - Siggi - netcdf support on gfld3 (decalpha)
	56	# 11/05/05 - Siggi - files with non-numeric extensions (.xxx after cycle
	57	# number) can now be used within interactive runs
	58	# 12/05/05 - Siggi - netcdf support on ibm
	59	# 13/05/05 - Siggi - error in tar-filenames on $PERM (HLRN) removed
	60	# 18/05/05 - Siggi - netcdf support on nec
	61	# 24/05/05 - Siggi - netcdf support on ibms
	62	# 14/06/05 - Siggi - sleep interval after submit of restart job increased
	63	# to 30 seconds
	64	# 28/06/05 - Siggi - bora adjusted to new intel compiler (LD_LIBRARY_
	65	# PATH is temporarily set)
	66	# 07/09/05 - Siggi - setting of MP_EAGER_LIMIT switched off because it
	67	# caused warnings in the job protocol
	68	# 20/10/05 - Siggi - update of netcdf-version on decalpha (gfdl3)
	69	# 25/10/05 - Siggi - error in listing files for getting the cycle number
	70	# removed
	71	# 26/10/05 - Siggi - new paths for dvrp-library, transfer of catalogs
	72	# realized by file attribute trpe
	73	# 28/10/05 - Siggi - if existing, the file extension is output in case
	74	# of missing input file - no job abort in case of
	75	# missing input files with file extensions
	76	# (preliminary solution)
	77	# 31/10/05 - Siggi - data transfer from nech now within seperate job
	78	# 04/11/05 - Siggi - netcdf 3.6.0-p1 on ibmh/ibmb
	79	# 07/12/05 - Siggi - gallego and elephanta admitted
	80	# 30/12/05 - Siggi - gfdl5 (ibmy) admitted
	81	# 10/01/06 - Siggi - cpp directive for NetCDF 64bit support
	82	# 20/01/06 - Siggi - cpp directive for ibmy
	83	# 09/02/06 - Siggi - ibmy admitted for batch mode
	84	# 13/04/06 - Siggi - ostria admitted
	85	# 18/04/06 - Siggi - usage of OpenMP implemented (additional option -O)
	86	# 10/05/06 - Siggi - environment variable XLSMPOPTS set on IBM for
	87	# optimization of OpenMP runs (option stacksize is
	88	# necessary for large gridpoint numbers because
	89	# otherwise a segmentation fault occurs)
	90	# 23/05/05 - Siggi - lctit (SUN Fire X4600) admitted
	91	# 21/08/06 - Siggi - standard mrun path on scirocco is as on bora
	92	# 23/08/06 - Siggi - netcdf support for scirocco (notebook)
	93	# 20/09/06 - Marcus - add DVRP library on nech
	94	# 24/10/06 - Siggi - Environment variables for PALM steering are written
	95	# on local NAMELIST file ENVPAR
	96	# 24/11/06 - Siggi - levanto admitted, maestro switched to ifc 9.1
	97	# 28/11/06 - Siggi - call to interpret_config.x_levanto because of SuSe 10
	98	# 06/02/07 - Siggi - add DVRP library on lcmuk
	99	# 07/02/07 - Siggi - revision of source code handling, source code is
	100	# now expected in directory given by source_path and
	101	# not in the current working directory, source code
	102	# files provided in add_source_path are allways
	103	# compiled, source code to be compiled is allways
	104	# sampled in SOURCES_FOR_RUN_$fname which is a
	105	# subdirectory of the current working directory,
[5]	106	# -s TEST changed to -s WRITE_PERMIT or -s WP,
[1]	107	# adapted for RIAM (neck)
[5]	108	# bugfix for cycle number of output file (extout)
	109	# all hpmuk-related code removed
[14]	110	# 14/02/07 - Siggi - dvrp support for neck added
[21]	111	# 28/02/07 - Siggi - empty lines in configuration file are accepted
[26]	112	# mrun_path replaced by PALM_BIN,
	113	# all machines are calling interpret_config.x
[1]	114
	115
	116
	117
	118	# VARIABLENVEREINBARUNGEN + DEFAULTWERTE
	119
	120	set +o allexport # SICHERHEITSHALBER UNTERBINDEN, DA SONST EVTL. STAGEOUT
	121	# NICHT LAUEFT (TOO MANY ARGUMENTS - PROBLEM)
	122	set +o noclobber # EXISTIERENDE DATEIEN DUERFEN UEBERSCHRIEBEN WERDEN
	123
	124	AddFilenames=""
	125	additional_conditions=""
	126	add_source_path=""
	127	afname=""
	128	archive_save=true
	129	archive_system=none
	130	compiler_name=""
	131	cond1=""
	132	cond2=""
	133	config_file=.mrun.config
	134	cpp_opts=""
	135	cpumax=0
	136	cpurest=0
	137	delete_temporary_catalog=true
	138	do_batch=false
	139	do_compile=true
	140	do_remote=false
	141	do_stagein=true
	142	do_stageout=true
	143	do_trace=false
	144	email_notification=""
	145	exclude=""
	146	executable=""
	147	execution_error=false
	148	filetransfer_protocol=""
	149	fname=test
	150	fromhost=""
	151	host=""
	152	host_file=""
	153	hp=""
	154	ignore_archive_error=false
	155	input_list=""
	156	interpreted_config_file=""
	157	job_on_file=""
	158	keep_data_from_previous_run=false
	159	localhost_realname=$(hostname)
	160	local_compile=false
	161	locat=normal
	162	mainprog=""
	163	makefile=""
	164	mc=$0
	165	while [[ $(echo $mc \| grep -c "/") != 0 ]]
	166	do
	167	mc=`echo $mc \| cut -f2- -d"/"`
	168	done
	169	module_files=""
	170	MODULE_OPTIONS=""
	171	mrun_script_name=$mc
	172	netcdf_support=false
	173	node_usage=default
	174	numprocs=""
	175	OOPT=""
	176	openmp=false
	177	output_list=""
	178	package_list=""
	179	punkte="..........................................................."
	180	queue=none
	181	read_from_config=""
[5]	182	restart_run=false
[27]	183	return_addres=$(nslookup `hostname` 2>&1 \| grep "Address:" \| tail -1 \| awk '{print $2}')
[1]	184	if [[ $return_addres = 130.75.105.158 ]]
	185	then
	186	return_addres=172.20.25.41
	187	echo "+++ WARNING: return_addres changed to $return_addres !!!!!"
	188	fi
	189	# if [[ $return_addres = 210.117.65.1 ]]
	190	# if [[ $(nslookup `hostname` 2>&1 \| grep -c 210.117.65.1) = 1 ]]
	191	# then
	192	# [[ $localhost_realname = gfdl3.yonsei.ac.kr ]] && return_addres=165.132.26.56
	193	# fi
	194	return_password=""
	195	return_username=$LOGNAME
	196	remotecall=false
	197	remote_username=""
	198	run_mode=""
	199	scirocco=false
	200	store_on_archive_system=true
	201	striche=" ----------------------------------------------------------------------------"
	202	silent=false
	203	source_list=""
	204	source_path=SOURCE
	205	tasks_per_node=""
	206	threads_per_task=1
	207	tmpcreate=false
	208	tmp_data_catalog=""
	209	transfer_problems=false
	210	usern=$LOGNAME
	211	use_makefile=""
	212	working_directory=`pwd`
	213	TOPT=""
	214	XOPT=""
	215	zeit=$( date \| cut -c 12-19 )
	216
	217	typeset -i iec=0 iic=0 iin=0 ioc=0 iout=0 memory=0 stagein_anz=0 stageout_anz=0
	218	typeset -i cputime i ii icycle inode ival jobges jobsek maxcycle minuten nodes pes sekunden tp1
	219
	220	typeset -R40 calltime
	221	typeset -L20 spalte1
	222	typeset -L40 spalte2
	223	typeset -L60 spalte3
	224	typeset -L35 string1=`date`
	225	typeset -L12 string2=$usern
	226	typeset -L12 string3=$localhost_realname
	227	typeset -L12 string4
	228	typeset -L12 string5
[54]	229	typeset -L20 version="MRUN 2.0"
[1]	230
	231
	232
	233	# EINZELNE VARIABLE FUER HAUPTPROGRAMM EXPORTIEREN
	234	export cpurest fname host localhost return_addres return_username remotecall tasks_per_node
	235
	236	# FOLGENDE VARIABLEN MUESSEN FUER DIE INTERPRETATION DER KONFIGURATIONSDATEI
	237	# EXPORTIERT WERDEN
	238	export afname config_file cpp_opts cpumax do_batch do_trace fname fromhost
	239	export input_list memory numprocs output_list queue run_mode
	240
	241
	242
	243	# FEHLERBEHANDLUNG
	244	# BEI EXIT:
	245	trap 'if [[ $locat != localhost ]]
	246	then
[22]	247	# if [[ ! -f ${mrun_path}/statistik/mrun_statistik ]]
	248	# then
	249	# cat > ${mrun_path}/statistik/mrun_statistik << %STATEND%
	250	#MRUN-calls on $localhost
	251	#
	252	#date and time user localhost remotehost termination mrun-command
	253	#--------------------------------------------------------------------------------------------------------------------
	254	#%STATEND%
	255	# chmod 666 ${mrun_path}/statistik/mrun_statistik
	256	# fi
	257	#
	258	# # EINTRAG IN DIE STATISTIK-DATEI
	259	# string4=$host
	260	# string5=$locat
	261	# if [[ "$job_on_file" = "" && $locat != control_c && $locat != user_abort ]]
	262	# then
	263	# if [[ $do_batch = true ]]
	264	# then
	265	# printf "$string1$string2$string3$string4$string5$mrun_com \n" >> ${mrun_path}/statistik/mrun_statistik
	266	# else
	267	# printf "$string1$string2$string3$string4$string5$mc \n" >> ${mrun_path}/statistik/mrun_statistik
	268	# fi
	269	# fi
	270	continue
[1]	271	fi
	272
	273	if [[ $locat != normal && $locat != control_c && $locat != local_compile ]]
	274	then
	275
	276	# EVENTUELLE ERROR-KOMMANDOS ABARBEITEN
	277	(( i = 0 ))
	278	while (( i < iec ))
	279	do
	280	(( i = i + 1 ))
	281	printf "\n *** Execution of ERROR-command:\n"
	282	printf " >>> ${err_command[$i]}\n"
	283	eval ${err_command[$i]}
	284	done
	285	if [[ -n $interpreted_config_file ]] then
	286	rm -rf $interpreted_config_file
	287	fi
	288	if [[ $tmpcreate = true ]]
	289	then
	290	printf "\n *** Contents of \"$TEMPDIR\":\n"
	291	ls -al; cd
	292	[[ $delete_temporary_catalog = true ]] && rm -rf $TEMPDIR
	293	fi
	294	if [[ -f ~/job_queue/JOBINFO.$QSUB_REQID ]]
	295	then
	296	rm -rf ~/job_queue/JOBINFO.$QSUB_REQID
	297	fi
	298	printf "\n\n+++ MRUN killed \n\n"
	299	elif [[ $locat != control_c ]]
	300	then
	301	printf "\n\n --> all actions finished\n\n"
	302	printf " Bye, bye $usern !!\n\n"
	303	fi' exit
	304
	305
	306	# BEI TERMINAL-BREAK:
	307	trap '[[ $tmpcreate = true ]] && (cd; rm -rf $TEMPDIR)
	308	if [[ -f ~/job_queue/JOBINFO.$QSUB_REQID ]]
	309	then
	310	rm -rf ~/job_queue/JOBINFO.$QSUB_REQID
	311	fi
	312	printf "\n+++ MRUN killed by \"^C\" \n\n"
	313	locat=control_c
	314	exit
	315	' 2
	316
	317
[22]	318	# CHECK IF THE PATH FOR THE PALM BINARIES (SCRIPTS+UTILITY-PROGRAMS) HAS
	319	# BEEN SET
	320	if [[ "$PALM_BIN" = "" ]]
	321	then
	322	printf "\n +++ environment variable PALM_BIN has not been set"
	323	printf "\n please set it to the directory where the PALM scripts are located"
	324	locat=palm_bin; exit
	325	fi
	326
	327
[1]	328	# EVTL. NAMEN DES LOKALEN RECHNERS MIT UEBERGREIFENDEM NAMEN VERSEHEN
	329	case $localhost_realname in
[22]	330	(atmos) localhost=lcide;;
	331	(bora\|breva\|elephanta\|gallego\|gregale\|hababai\|irifi\|levanto\|maestro\|orkan\|ostria\|poniente\|quanero\|scirocco\|vorias) localhost=lcmuk;;
	332	(breg-en0\|berni-en0) localhost=ibmb; archive_system=tivoli;;
	333	(cs*) localhost=nech; archive_system=ut;;
	334	(gate\|n-sx) PATH=$MRUN_BIN:$PATH:/usr/bin/nqsII; localhost=neck;;
	335	(ground.yonsei.ac.kr) localhost=decalpha;;
	336	(gfdl3.yonsei.ac.kr) localhost=decalpha;;
	337	(gfdl5) localhost=ibmy;;
	338	(hreg-en0\|hanni-en0) localhost=ibmh; archive_system=tivoli;;
	339	(nobel*) localhost=ibms;;
	340	(sun1\|sun2) localhost=unics;;
	341	(tgg*) localhost=lctit;;
[1]	342	(*) printf "\n +++ Host \"$localhost_realname\" not admitted for mrun \n"
	343	locat=localhost; exit;;
	344	esac
	345
	346	[[ $localhost_realname = scirocco ]] && scirocco=true
	347
	348
	349
	350	# SHELLSCRIPT-OPTIONEN EINLESEN UND KOMMANDO NEU ZUSAMMENSETZEN, FALLS ES
	351	# FUER FOLGEJOBS BENOETIGT WIRD
	352	while getopts :a:AbBc:Cd:D:f:Fh:H:i:IkK:m:M:n:o:Op:P:q:r:R:s:St:T:u:U:vxX: option
	353	do
	354	case $option in
	355	(a) afname=$OPTARG;;
	356	(A) store_on_archive_system=false; mc="$mc -A";;
	357	(b) do_batch=true; mc="$mc -b";;
	358	(B) delete_temporary_catalog=false; mc="$mc -B";;
	359	(c) config_file=$OPTARG; mc="$mc -c$OPTARG";;
[5]	360	(C) restart_run=true; mc="$mc -C";;
[1]	361	(d) fname=$OPTARG; mc="$mc -d$OPTARG";;
	362	(D) cpp_opts="$cpp_opts $OPTARG"; mc="$mc -D$OPTARG";;
	363	(f) filetransfer_protocol=$OPTARG; mc="$mc -f$OPTARG";;
	364	(F) job_on_file="-D"; mc="$mc -F";;
	365	(h) host=$OPTARG; mc="$mc -h$OPTARG";;
	366	(H) fromhost=$OPTARG; mc="$mc -H$OPTARG";;
	367	(i) input_list=$OPTARG; mc="$mc -i'$OPTARG'";;
	368	(I) ignore_archive_error=true; mc="$mc -I";;
	369	(k) keep_data_from_previous_run=true; mc="$mc -k";;
	370	(K) additional_conditions="$OPTARG"; mc="$mc -K$OPTARG";;
	371	(m) memory=$OPTARG; mc="$mc -m$OPTARG";;
	372	(M) makefile=$OPTARG; mc="$mc -M$OPTARG";;
	373	(n) node_usage=$OPTARG; mc="$mc -n$OPTARG";;
	374	(o) output_list=$OPTARG; mc="$mc -o'$OPTARG'";;
	375	(O) use_openmp=true; mc="$mc -O";;
	376	(p) package_list=$OPTARG; mc="$mc -p'$OPTARG'";;
	377	(P) return_password=$OPTARG; mc="$mc -P$OPTARG";;
	378	(q) queue=$OPTARG; mc="$mc -q$OPTARG";;
	379	(r) run_mode=$OPTARG; mc="$mc -r'$OPTARG'";;
	380	(R) remotecall=true;return_addres=$OPTARG; mc="$mc -R$OPTARG";;
	381	(s) source_list=$OPTARG; mc="$mc -s'$OPTARG'";;
	382	(S) read_from_config=false; mc="$mc -S";;
	383	(t) cpumax=$OPTARG; mc="$mc -t$OPTARG";;
	384	(T) tasks_per_node=$OPTARG; mc="$mc -T$OPTARG";;
	385	(u) remote_username=$OPTARG; mc="$mc -u$OPTARG";;
	386	(U) return_username=$OPTARG; mc="$mc -U$OPTARG";;
	387	(v) silent=true; mc="$mc -v";;
	388	(x) do_trace=true;set -x; mc="$mc -x";;
	389	(X) numprocs=$OPTARG; mc="$mc -X$OPTARG";;
	390	(\?) printf "\n +++ unknown option $OPTARG \n"
	391	printf "\n --> type \"$0 ?\" for available options \n"
	392	locat=parameter;exit;;
	393	esac
	394	done
	395
	396
	397	# EVTL. POSITIONSPARAMETER EINLESEN
	398	# ZUR ZEIT GIBT ES NUR DEN PARAMETER ? (=KURZINFO)
	399	shift OPTIND-1
	400
	401
	402	# KURZE AUFRUFBESCHREIBUNG WIRD HIER AUSGEGEBEN
	403	if [[ "$1" = "?" ]]
	404	then
	405	(printf "\n *** mrun can be called as follows:\n"
	406	printf "\n $mrun_script_name -b -c.. -d.. -D.. -f.. -F -h.. -i.. -I -K.. -m.. -o.. -p.. -r.. -R -s.. -t.. -T.. -v -x -X.. <modus>\n"
	407	printf "\n Description of available options:\n"
	408	printf "\n Option Description Default-Value"
	409	printf "\n -a base name of input files equiv. -d"
	410	printf "\n -A no archiving when using file-attribute fl"
	411	printf "\n -b batch-job on local machine ---"
	412	printf "\n -B do not delete temporary directory at end ---"
	413	printf "\n -c configuration file .mrun.config"
	414	printf "\n -d base name of files attached to program test"
	415	printf "\n -D preprocessor(cpp)-directives \"\" "
	416	printf "\n -f filetransfer protocol (ftp or scp) depending on -h"
	417	printf "\n -F create remote job file only ---"
	418	printf "\n -h execution host $localhost_realname"
	419	printf "\n -i INPUT control list \"\" "
	420	printf "\n -I archiving errors of previous batch-jobs"
	421	printf "\n will be ignored"
	422	printf "\n -k keep data from previous run"
	423	printf "\n -K additional conditions for controling"
	424	printf "\n usage of conditional code and"
	425	printf "\n env-variables in configuration file \"\" "
	426	printf "\n -m memory demand in MB (batch-jobs) 0 MB"
	427	printf "\n -M Makefile name Makefile"
	428	printf "\n -n node usage (shared/not_shared) depending on -h"
	429	printf "\n -o OUTPUT control list \"\" "
	430	printf "\n -O use OpenMP ---"
	431	printf "\n -p software package list \"\" "
	432	printf "\n -q queue \"$queue\" "
	433	printf "\n -r run control list (combines -i -o) \"\" "
	434	printf "\n -s filenames of routines to be compiled \"\" "
	435	printf "\n must end with .f, .f90, .F, or .c !"
	436	printf "\n use \"..\" for more than one file and wildcards"
	437	printf "\n -s TEST compiles all files with w-permit"
	438	printf "\n -S config file interpreted by shellscript ---"
	439	printf "\n -t allowed cpu-time in seconds (batch) 0"
	440	printf "\n -T tasks per node depending on -h"
	441	printf "\n -u username on remote machine \"\" "
	442	printf "\n -v no prompt for confirmation ---"
	443	printf "\n -x tracing of mrun for debug purposes ---"
	444	printf "\n -X # of processors (on parallel machines) 1"
	445	printf "\n "
	446	printf "\n Possible values of positional parameter <modus>:"
	447	printf "\n \"?\" - this outline \n\n") \| more
	448	exit
	449	elif [[ "$1" != "" ]]
	450	then
	451	printf "\n +++ positional parameter $1 unknown \n"
	452	locat=parameter; exit
	453	fi
	454
	455
	456
	457	# KURZE STARTMELDUNG
	458	printf "\n*** $version "
	459	printf "\n will be executed. Please wait ..."
	460
	461
	462	# BASISNAME DER INPUT-DATEIEN GLEICH ALLGEMEINEM BASISNAMEN SETZEN,
	463	# WENN NICHT VOM BENUTZER ANDERS BESTIMMT
	464	[[ "$afname" = "" ]] && afname=$fname
	465
	466
	467	# EVTL. RUN-MODUS DEN I/O-LISTEN HINZUFUEGEN
	468	if [[ "$run_mode" != "" ]]
	469	then
	470	input_list="$input_list $run_mode"
	471	output_list="$output_list $run_mode"
	472	fi
	473
	474
	475	# RECHNERNAMEN ABSPEICHERN, VON DEM AUS JOB GESTARTET WIRD,
	476	# ALLERDINGS NUR DANN, WENN NICHT PER OPTION -H BEREITS EIN WERT
	477	# ZUGEWIESEN WURDE (MRUN MACHT DIES IMMER, WENN ES SELBST BATCH-JOBS
	478	# STARTET)
	479	if [[ "$fromhost" = "" ]]
	480	then
	481	fromhost=$localhost
	482	fi
	483
	484
	485	# PRUEFEN, OB MRUN NUR TESTWEISE AUF DER LOKALEN MASCHINE KOMPILIEREN SOLL
	486	if [[ "$source_list" = LOCAL_COMPILE_TEST ]]
	487	then
	488	source_list=TEST
	489	local_compile=true
	490	host=$localhost
	491	fi
	492
	493
	494	# PRUEFEN, OB AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL
	495	# WERT VON do_remote WIRD FUER DATEIVERBINDUNGEN BENOETIGT.
	496	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
	497	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
	498	if [[ -n $host && "$host" != $localhost ]]
	499	then
	500	do_batch=true
	501	do_remote=true
	502	case $host in
[5]	503	(ibm\|ibmb\|ibmh\|ibms\|ibmy\|nech\|neck\|lctit\|unics) true;;
[1]	504	(*) printf "\n"
	505	printf "\n +++ execution host \"$host\" not admitted for MRUN,"
	506	printf "\n or NQS not available on execution host!"
	507	locat=nqs; (( iec = 0 )); exit;;
	508	esac
	509	else
	510	host=$localhost
	511	fi
	512
	513
	514	# ZUSATZBEDINGUNGEN (OPTION -K) AUSWERTEN
	515	if [[ -n $additional_conditions ]]
	516	then
	517	echo $additional_conditions \| cut -d" " -f1-3 \| read cond1 cond2 dummy
	518	# cond1=`echo $additional_conditions \| cut -d" " -f1`
	519	# cond2=`echo $additional_conditions \| cut -d" " -s -f2`
	520	# dummy=`echo $additional_conditions \| cut -d" " -s -f3`
	521	if [[ -n $dummy ]]
	522	then
	523	printf "\n +++ more than 2 additional conditions given for Option \"-K\""
	524	locat=options; exit
	525	fi
	526	fi
	527
	528
	529	# PRUEFEN, OB EVTL. BEI VORHERGEHENDEM LAUF (KETTENJOB) EINE
	530	# ARCHIVIERUNG FEHLGESCHLAGEN IST
	531	if [[ -f ~/job_queue/ARCHIVE_ERROR_$fname ]]
	532	then
	533	if [[ $ignore_archive_error = false ]]
	534	then
	535	printf "\n +++ data archiving of previous run failed"
	536	printf "\n see directory \~/job_queue on remote machine"
	537	locat=archive; exit
	538	else
	539	printf "\n +++ warning: data archiving in a previous run failed"
	540	printf "\n MRUN continues, trying to get backup copy"
	541	fi
	542	fi
	543
	544
	545	# PRUEFEN, OB KONFIGURATIONS-DATEI VORHANDEN
	546	if [[ ! -f $config_file ]]
	547	then
	548	printf "\n\n +++ configuration file: "
	549	printf "\n $config_file"
	550	printf "\n does not exist"
	551	locat=connect; exit
	552	fi
	553
	554
	555
	556	# LESEN UND INTERPRETIEREN DER KONFIGURATIONS-DATEI VOM SHELLSCRIPT AUS
	557	# VORUEBERGEHEND ZWINGEND AUF LINUX-RECHNERN
	558	if [[ "$read_from_config" = false ]]
	559	then
	560
	561	[[ $silent = false ]] && printf "\n Reading the configuration file... "
	562	while read zeile
	563	do
	564	[[ $silent = false ]] && printf "."
	565
	566
	567	# ZUERST EVENTUELL VORKOMMENDE ENVIRONMENT-VARIABLEN DURCH IHRE WERTE
	568	# ERSETZEN
	569	eval zeile=\"$zeile\"
	570
	571
	572	# INTERPRETATION DER ZEILE
[21]	573	if [[ "$(echo $zeile)" = "" ]]
[1]	574	then
[21]	575	# LEERZEILE, KEINE AKTION
	576	continue
[1]	577
[21]	578	elif [[ "$(echo $zeile \| cut -c1)" = "#" ]]
	579	then
	580
[1]	581	# ZEILE IST KOMMENTARZEILE
	582	true
	583
	584	elif [[ "$(echo $zeile \| cut -c1)" = "%" ]]
	585	then
	586
	587	# ZEILE DEFINIERT ENVIRONMENT-VARIABLE
	588	zeile=$(echo $zeile \| cut -c2-)
	589	echo $zeile \| cut -d" " -f1-5 \| read var value for_host for_cond1 for_cond2
	590	# var=`echo $zeile \| cut -d" " -f1`
	591	# value=`echo $zeile \| cut -d" " -s -f2`
	592	# for_host=`echo $zeile \| cut -d" " -s -f3`
	593	# for_cond1=`echo $zeile \| cut -d" " -s -f4`
	594	# for_cond2=`echo $zeile \| cut -d" " -s -f5`
	595
	596	if [[ "$for_host" = "" \|\| ( "$for_host" = $host && "$for_cond1" = "$cond1" && "$for_cond2" = "$cond2" ) \|\| $(echo "$input_list$output_list"\|grep -c "$for_host") != 0 ]]
	597	then
	598
	599	# BEI COMPILER- CPP- ODER LINKEROPTIONEN EVTL ":" DURCH " "
	600	# ERSETZEN. "::" WIRD DURCH ":" ERSETZT.
	601	value=`echo $value \| sed 's/::/%DUM%/g' \| sed 's/:/ /g' \| sed 's/%DUM%/:/g'`
	602
	603
	604	# ENVIRONMENT-VARIABLE WIRD WERT AUS KONFIGURATIONSDATEI
	605	# ZUGEWIESEN, WENN SIE SELBST NOCH KEINEN WERT UEBER DIE
	606	# ENTSPRECHENDE SCRIPT-OPTION ERHALTEN HAT. SOLCHE
	607	# VARIABLEN HAETTEN DANN DEN WERT "" ODER IM INTEGER-FALL DEN
	608	# WERT 0. ALLGEMEINE REGEL ALSO: SCRIPT-OPTION GEHT UEBER
	609	# KONFIGURATIONSDATEI
	610	if [[ "$(eval echo \$$var)" = "" \|\| "$(eval echo \$$var)" = "0" ]]
	611	then
	612	eval $var=\$value
	613
	614	# EVTL. BILDSCHIRMAUSGABEN DER ENVIRONMENT-VARIABLEN
	615	if [[ $do_trace = true ]]
	616	then
	617	printf "\n*** ENVIRONMENT-VARIABLE $var = $value"
	618	fi
	619	fi
	620
	621	# WENN ENVIRONMENT-VARIABLE HOST VEREINBART, DANN SOFORT AUSWERTEN
	622	# WERT VON do-remote WIRD BEI DATEIVERBINDUNGEN BENOETIGT
	623	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
	624	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
	625	if [[ $var = host ]]
	626	then
	627	if [[ -n $host && "$host" != $localhost ]]
	628	then
	629	do_batch=true
	630	do_remote=true
	631	case $host in
	632	(ibm\|ibms\|ibmy\|lctit\|nech\|neck\|unics) true;;
	633	(*) printf "\n +++ no queueing system available on execution host \"$host\""
	634	locat=nqs; exit;;
	635	esac
	636	else
	637	host=$localhost
	638	fi
	639	fi
	640
	641	# VOM BENUTZER DEFINIERTE ENVIRONMENT VARIABLEN MUESSEN PRINZIPIELL
	642	# EXPORTIERT WERDEN, DA SIE VIELLEICHT IN WEITER UNTEN AUFZURUFEN-
	643	# DEN PROGRAMMEN BENOETIGT WERDEN
	644	export $var
	645	fi
	646
	647
	648
	649
	650	elif [[ "$(echo $zeile \| cut -c1-3)" = "EC:" ]]
	651	then
	652
	653	# ZEILE DEFINIERT ERROR-KOMMANDO
	654	(( iec = iec + 1 ))
	655	zeile=$(echo $zeile \| cut -c4-)
	656	err_command[$iec]="$zeile"
	657
	658	elif [[ "$(echo $zeile \| cut -c1-3)" = "IC:" ]]
	659	then
	660
	661	# ZEILE DEFINIERT INPUT-KOMMANDO
	662	(( iic = iic + 1 ))
	663	zeile=$(echo $zeile \| cut -c4-)
	664	in_command[$iic]="$zeile"
	665
	666	elif [[ "$(echo $zeile \| cut -c1-3)" = "OC:" ]]
	667	then
	668
	669	# ZEILE DEFINIERT OUTPUT-KOMMANDO
	670	(( ioc = ioc + 1 ))
	671	zeile=$(echo $zeile \| cut -c4-)
	672	out_command[$ioc]="$zeile"
	673
	674	else
	675
	676	# ZEILE DEFINIERT DATEIVERBINDUNG. EINLESEN DER DATEIEIGENSCHAFTEN
	677	# s2a: in/out - Feld
	678	# s2b: loc - Feld (optional)
	679	# s2c: tr/ar - Feld (optional)
	680	echo $zeile \| cut -d" " -f1-2 \| read s1 s2
	681	# s1=`echo $zeile \| cut -d" " -f1`
	682	# s2=`echo $zeile \| cut -d" " -s -f2`
	683	s2a=$(echo $s2 \| cut -d":" -f1)
	684	if [[ $(echo $s2 \| grep -c ":") = 0 ]]
	685	then
	686	s2b=""
	687	s2c=""
	688	else
	689	echo $s2 \| cut -d":" -f2-3 \| sed 's/:/ /g' \| read s2b s2c
	690	# s2b=`echo $s2 \| cut -d":" -f2 \| sed 's/:/ /g'`
	691	# s2c=`echo $s2 \| cut -d":" -s -f3 \| sed 's/:/ /g'`
	692	fi
	693	echo $zeile \| cut -d" " -f3-6 \| read s3 s4 s5 s6
	694	# s3=`echo $zeile \| cut -d" " -f3`
	695	# s4=`echo $zeile \| cut -d" " -s -f4`
	696	# s5=`echo $zeile \| cut -d" " -s -f5`
	697	# s6=`echo $zeile \| cut -d" " -s -f6`
	698
	699
	700	# ABSPEICHERN DER DATEIVERBINDUNG, FALLS IN INPUT- ODER OUTPUT-LIST
	701	# VERMERKT. VARIABLE S3 KANN AUCH LISTE ENTHALTEN (FELDTRENNER ":")
	702	# DATEIVERBINDUNG WIRD DANN NICHT ABGESPEICHERT UND GEPRUEFT, WENN
	703	# PROGRAMMLAUF AUF REMOTE-MASCHINE ERFOLGT UND DATEI NUR LOKAL VOR-
	704	# HANDEN SEIN MUSS (D.H. s2b = loc)
	705	IFSALT="$IFS"; IFS="$IFS:"
	706	if [[ "$s2a" = in && ! ( $do_remote = true && ( "$s2b" = loc \|\| "$s2b" = locopt ) ) ]]
	707	then
	708	found=false
	709	for actual in $input_list
	710	do
	711	for formal in $s3
	712	do
	713	[[ $actual = $formal \|\| "$formal" = "-" ]] && found=true
	714	done
	715	done
	716	if [[ $found = true ]]
	717	then
	718	(( iin = iin + 1 ))
	719	localin[$iin]=$s1; transin[$iin]=$s2b; actionin[$iin]=$s2c;
	720	typein[$iin]=$s3; pathin[$iin]=$s4; endin[$iin]=$s5;
	721	extin[$iin]=$s6
	722	fi
	723	elif [[ "$s2a" = out && ! ( $do_remote = true && "$s2b" = loc ) ]]
	724	then
	725	found=false
	726	for actual in $output_list
	727	do
	728	for formal in $s3
	729	do
	730	[[ $actual = $formal \|\| "$formal" = "-" ]] && found=true
	731	done
	732	done
	733	if [[ $found = true ]]
	734	then
	735	(( iout = iout + 1 ))
	736	localout[$iout]=$s1; actionout[$iout]=$s2c; typeout[$iout]=$s3;
	737	pathout[$iout]=$s4; endout[$iout]=$s5; extout[$iout]=$s6
	738	fi
	739	elif [[ "$s2a" != in && "$s2a" != out ]]
	740	then
	741	printf "\n +++ I/O-attribute in configuration file $config_file has the invalid"
	742	printf "\n value \"$s2\". Only \"in\" and \"out\" are allowed!"
	743	locat=connect; exit
	744	fi
	745	IFS="$IFSALT"
	746	fi
	747	done < $config_file
	748
	749	else
	750
	751
	752	# INTERPRETATION DER KONFIGURATIONSDATEI MITTELS FORTRAN 90 - PROGRAMM
	753	[[ $silent = false ]] && printf "..."
	754	export cond1 cond2 config_file do_remote do_trace input_list localhost output_list
	755	export interpreted_config_file=.icf.$RANDOM
	756
[26]	757	# case $localhost_realname in
	758	# (caurus\|twister) interpret_config.hp;;
	759	# (bora\|breva\|elephanta\|gallego\|gregale\|hababai\|maestro\|orkan\|ostria) export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/muksoft/packages/intel_ifc/8.1/lib/; interpret_config_9.x;;
	760	# (levanto\|vorias) export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/muksoft/packages/intel/ifort/9.1.037/lib/; interpret_config_9.x_levanto;;
	761	# (quanero) export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/opt/intel_fc_80/lib; interpret_config_9.x;;
	762	# (*) interpret_config.x;;
	763	# esac
[1]	764
[26]	765	interpret_config.x
[1]	766
	767	# AUSFUEHRUNG DER GENERIERTEN SHELL-KOMMANDOS IN DIESER SHELL
	768	chmod u+x $interpreted_config_file
	769	export PATH=$PATH:.
	770	. $interpreted_config_file
	771	rm $interpreted_config_file
	772
	773	fi
	774
	775
	776	# QUELLTEXTVERZEICHNIS AUF LOKALER MASCHINE AUS KONFIGURATIONSDATEI
	777	# BESTIMMEN (WUERDE SONST EVTL. DAS VERZEICHNIS DES JEWEILS UNTER -h
	778	# ANGEGEBENEN REMOTE-RECHNERS SEIN)
	779	# BEI BATCH-JOBS SIND DIE ZU UEBERSETZENDEN PROGRAMMTEILE SCHON KOMPLETT
	780	if [[ "$SOURCES_COMPLETE" = "" ]]
	781	then
	782
	783	# ZUERST PRUEFEN, OB EIN GLOBALER QUELLTEXTPFAD FUER ALLE RECHNER
	784	# VEREINBART WURDE
	785	source_path=""
	786	line=""
	787	grep "%source_path" $config_file > tmp_mrun
	788	while read line
	789	do
	790	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
	791	then
	792	if [[ "$(echo $line \| cut -d" " -f3)" = "" ]]
	793	then
	794	global_source_path=`echo $line \| cut -d" " -f2`
	795	fi
	796	fi
	797	done < tmp_mrun
	798
	799	line=""
	800	found=false
	801	grep " $localhost" $config_file \| grep "%source_path" > tmp_mrun
	802	while read line
	803	do
	804	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
	805	then
	806	if [[ $found = true ]]
	807	then
	808	printf "\n\n +++ more than one source path found in configuration file"
	809	printf "\n for local host \"$localhost\" "
	810	locat=source_path; exit
	811	fi
	812	source_path=`echo $line \| cut -d" " -f2`
	813	found=true
	814	fi
	815	done < tmp_mrun
	816	rm tmp_mrun
	817
	818	if [[ "$source_path" = "" ]]
	819	then
	820	if [[ "$global_source_path" != "" ]]
	821	then
	822	source_path=$global_source_path
	823	else
	824	printf "\n\n +++ no source path found in configuration file"
	825	printf "\n for local host \"$localhost\" "
	826	locat=source_path; exit
	827	fi
	828	fi
	829	eval source_path=$source_path
	830
	831	if [[ ! -d $source_path ]]
	832	then
	833	printf "\n\n +++ source path \"$source_path\" on local host"
	834	printf "\n \"$localhost\" does not exist"
	835	locat=source_path; exit
	836	fi
	837
	838	fi
	839
	840
	841
	842	# NOCHMAL PRUEFEN, OB AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL
	843	# (HOST KANN IN KONFIGURATIONSDATEI ANDERS FESTGELEGT WORDEN SEIN)
	844	# WERT VON do_remote WIRD FUER DATEIVERBINDUNGEN BENOETIGT.
	845	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
	846	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
	847	if [[ -n $host && "$host" != $localhost ]]
	848	then
	849	do_batch=true
	850	do_remote=true
	851	case $host in
[5]	852	(ibm\|ibmb\|ibmh\|ibms\|ibmy\|lctit\|nech\|neck\|unics) true;;
[1]	853	(*) printf "\n"
	854	printf "\n +++ execution host \"$host\" not admitted for MRUN,"
	855	printf "\n or no queueing system available on execution host!"
	856	locat=nqs; (( iec = 0 )); exit;;
	857	esac
	858	else
	859	host=$localhost
	860	fi
	861
	862
	863	# PRUEFUNG EINIGER PROZESSORZAHLANGABEN BEI RECHNUNGEN AUF PARALLELRECHNERN
	864	if [[ "$cond1" = parallel \|\| "$cond2" = parallel ]]
	865	then
	866
	867	# PRUEFEN, OB DIE ANZAHL DER ZU VERWENDENDEN PES ANGEGEBEN WURDE
	868	if [[ ! -n $numprocs ]]
	869	then
	870	printf "\n"
	871	printf "\n +++ option \"-K parallel\" requires additional specification"
	872	printf "\n of the number of processors to be used by"
	873	printf "\n mrun-option \"-X\" or by environment-variable"
	874	printf "\n \"numprocs\" in the configuration file"
	875	locat=numprocs; (( iec = 0 )); exit
	876	fi
	877
	878	# PRUEFEN, OB DIE PROZESSORANZAHL PRO KNOTEN ANGEGEBEN WURDE (GGF.
	879	# DEFAULT-WERT SETZEN) UND OB SIE EIN GANZZAHLIGER TEILER DER
	880	# GESAMTPROZESSORANZAHL IST
	881	if [[ $host = nech \|\| $host = neck \|\| $host = ibmh \|\| $host = ibmb \|\| $host = ibms ]]
	882	then
	883	[[ "$tasks_per_node" = "" ]] && tasks_per_node=6
	884	(( ival = $tasks_per_node ))
	885	(( pes = numprocs ))
	886	# if [[ $(echo $package_list \| grep -c dvrp_graphics+1PE) = 1 ]]
	887	# then
	888	# (( pes = pes - 1 ))
	889	# fi
	890	(( ii = pes / ival ))
	891	if (( pes - ii * ival > 0 ))
	892	then
	893	printf "\n"
	894	printf "\n +++ tasks per node (option \"-T\") must be an integral"
	895	printf "\n divisor of the total number of processors (option \"-X\")"
	896	printf "\n values of this mrun-call: \"-T $tasks_per_node\" \"-X $numprocs\""
	897	locat=tasks_per_node; (( iec = 0 )); exit
	898	fi
	899	fi
	900
	901	# IBMY HAT NUR EINEN KNOTEN
	902	if [[ $host = ibmy ]]
	903	then
	904	if [[ "$tasks_per_node" != "" && "$tasks_per_node" != "$numprocs" ]]
	905	then
	906	printf "\n"
	907	printf "\n +++ on ibmy, tasks per node (option \"-T\") must be equal to the"
	908	printf "\n total number of processors (option \"-X\")"
	909	printf "\n values of this mrun-call: \"-T $tasks_per_node\" \"-X $numprocs\""
	910	locat=tasks_per_node; (( iec = 0 )); exit
	911	fi
	912	fi
	913
	914	# FALLS OPENMP PARALLELISIERUNG VERWENDET WERDEN SOLL, ANZAHL VON THREADS
	915	# SETZEN UND ZAHL DER TASKS PRO KNOTEN AUF 1 SETZEN
	916	if [[ $use_openmp = true ]]
	917	then
	918	threads_per_task=$tasks_per_node
	919	tasks_per_node=1
	920	fi
	921	OOPT="-O $threads_per_task"
	922	TOPT="-T $tasks_per_node"
	923
	924	# GESAMTZAHL DER KNOTEN BESTIMMEN
	925	if [[ "$tasks_per_node" != "" ]]
	926	then
	927	(( nodes = numprocs / ( tasks_per_node * threads_per_task ) ))
	928	fi
	929
	930	# PRUEFEN, OB NODE USAGE EINEN ERLAUBTEN WERT HAT BZW. DEN DEFAULT
	931	# SETZEN
	932	if [[ $node_usage = default ]]
	933	then
	934	if [[ $host = ibms ]]
	935	then
	936	node_usage=shared
	937	else
	938	node_usage=not_shared
	939	fi
	940	fi
	941	if [[ $node_usage != shared && $node_usage != not_shared ]]
	942	then
	943	printf "\n"
	944	printf "\n +++ node usage (option \"-n\") is only allowed to be set"
	945	printf "\n \"shared\" or \"not_shared\""
	946	locat=tasks_per_node; (( iec = 0 )); exit
	947	fi
	948
	949	fi
	950
	951	# PRUEFEN, OB HOSTFILE EXISTIERT
	952	if [[ -n $hostfile ]]
	953	then
	954	if [[ ! -f $hostfile ]]
	955	then
	956	printf "\n"
	957	printf "\n +++ hostfile \"$hostfile\" does not exist"
	958	locat=hostfile; exit
	959	fi
	960	fi
	961
	962	# PRUEFEN, OB RHOSTS DATEI EXISTIERT. GEGEBENENFALLS ANLEGEN BZW. ERWEITERN
	963	if [[ $host = ibmy && $do_remote = false ]]
	964	then
	965	if [[ ! -f $HOME/.rhosts ]]
	966	then
	967	echo "gfdl5.yonsei.ac.kr" > $HOME/.rhosts
	968	printf "\n\n *** file:"
	969	printf "\n $HOME/.rhosts"
	970	printf "\n was created\n"
	971	fi
	972	if [[ $(grep -c gfdl5.yonsei.ac.kr $HOME/.rhosts) = 0 ]]
	973	then
	974	echo "gfdl5.yonsei.ac.kr" >> $HOME/.rhosts
	975	printf "\n\n *** file:"
	976	printf "\n $HOME/.rhosts"
	977	printf "\n was extended by the name of the current host\n"
	978	fi
	979	fi
	980
	981	# DEFAULT-DATEITRANSFER-PROTOKOLL FESTLEGEN
	982	if [[ "$filetransfer_protocol" = "" ]]
	983	then
	984	case $host in
	985	(nech\|neck\|ibm\|ibmb\|ibmh\|ibms\|ibmy\|lctit) filetransfer_protocol=scp;;
	986	(*) filetransfer_protocol=ftp;;
	987	esac
	988	fi
	989
	990	# PRUEFEN, OB ZULAESSIGES DATEITRANSFER-PROTOKOLL GEWAEHLT WURDE
	991	if [[ "$filetransfer_protocol" != ftp && "$filetransfer_protocol" != scp ]]
	992	then
	993	printf "\n"
	994	printf "\n +++ illegal value \"$filetransfer_protocol\" for Option -f"
	995	printf "\n only \"ftp\" or \"scp\" are allowed"
	996	locat=options; exit
	997	fi
	998
	999
	1000	# FALLS NICHT VORGEGEBEN, DEFAULT-QUEUE AUF DER ZIELMASCHINE FESTLEGEN
	1001	if [[ $queue = none ]]
	1002	then
	1003	case $host in
	1004	(ibmb) if [[ $node_usage = shared ]]
	1005	then
	1006	queue=cshare
	1007	else
	1008	queue=csolo
	1009	fi;;
	1010	(ibmh) if [[ $node_usage = shared ]]
	1011	then
	1012	queue=cshare
	1013	else
	1014	queue=csolo
	1015	fi;;
	1016	(ibmy) queue=parallel;;
	1017	(lctit) queue=default;;
	1018	(nech) queue=none;;
	1019	(neck) queue=P;;
	1020	(unics) queue=unics;;
	1021	esac
	1022	fi
	1023
	1024
	1025	# EVTL. NETCDF-UNTERSTUETZUNG SETZEN
	1026	case $host in
	1027	(decalpha) netcdf_support=true
	1028	netcdf_path=/usr/local/netcdf-3.5.1;;
	1029	(ibmb\|ibmh) netcdf_support=true
	1030	netcdf_path=/aws/dataformats/netcdf-3.6.0-p1/64-32;;
	1031	(ibms) netcdf_support=true
	1032	netcdf_path=/applic/lib/NETCDF64;;
	1033	(ibmy) netcdf_support=true
	1034	netcdf_path=/usr1/users/raasch/pub/netcdf-3.6.0-p1;;
	1035	(lcmuk) netcdf_support=true
	1036	if [[ $scirocco = true ]]
	1037	then
	1038	netcdf_path=/opt/netcdf/3.6.2-beta4
	1039	else
	1040	netcdf_path=/muksoft/packages/netcdf/linux
	1041	fi;;
	1042	(lctit) netcdf_support=true
	1043	netcdf_path=/home2/usr5/mkanda/netcdf-3.6.1;;
	1044	(nech) netcdf_support=true
	1045	netcdf_path=/pool/SX-6/netcdf/netcdf-3.6.0-p1;;
	1046	(neck) netcdf_support=true
	1047	netcdf_path=/home/DSRC/NC/tatuyama/pub/netcdf-3.6.0-p1;;
	1048	esac
	1049
	1050
	1051	# VOLLSTAENDIGE DATEINAMEN DER INPUT-FILES BILDEN,
	1052	# INPUT-DATEIEN AUF VORHANDENSEIN PRUEFEN UND EVTL. HOECHSTE ZYKLUSNUMMER
	1053	# ERMITTELN
	1054	(( i = 0 ))
	1055	while (( i < iin ))
	1056	do
	1057	(( i = i + 1 ))
	1058	(( maxcycle = 0 ))
	1059
	1060	# NAMENSBILDUNG (EVTL. IST FESTER DATEINAME VORGEGEBEN)
	1061	if [[ "${actionin[$i]}" = di ]]
	1062	then
	1063	remotepathin[$i]=${pathin[$i]}/${endin[$i]} # REMOTE-PFAD ERST AUF
	1064	# REM-MASCHINE AUSWERTEN
	1065	eval filename=${pathin[$i]}/${endin[$i]}
	1066	else
	1067	remotepathin[$i]=${pathin[$i]}/${afname}${endin[$i]} # REMOTE-PFAD ERST AUF
	1068	# REM-MASCHINE AUSWERTEN
	1069	eval filename=${pathin[$i]}/${afname}${endin[$i]}
	1070	fi
	1071
	1072	# PRUEFEN AUF VORHANDENSEIN
	1073	if [[ $(ls $filename* 2>&1 \| grep -c "not found") = 1 \|\| \
	1074	$(ls $filename* 2>&1 \| grep -c "No such file") = 1 \|\| \
	1075	$(ls $filename* 2>&1 \| grep -c "does not exist") = 1 ]]
	1076	then
	1077	# DATEIEN MIT EXTENSION (Z.B. NC) MUESSEN NICHT ZWINGEND VORHANDEN
	1078	# SEIN, DESHALB IN SOLCHEN FAELLEN KEIN ABBRUCH. DIES IST NUR EINE
	1079	# VORUEBERGEHENDE LOESUNG (OKT 05). NICHT ZWINGEND BENOETIGTE
	1080	# EINGABEDATEIEN SOLLTEN EINE SPEZIELLE OPTION IN DER DATEI-
	1081	# VERBINDUNGSANWEISUNG BEKOMMEN (Z.B. inopt?)
	1082	if [[ "${transin[$i]}" != "locopt" ]]
	1083	then
	1084	printf "\n\n +++ INPUT-file: "
	1085	if [[ "${extin[$i]}" = "" ]]
	1086	then
	1087	printf "\n $filename"
	1088	else
	1089	printf "\n $filename.${extin[$i]}"
	1090	fi
	1091	printf "\n does not exist\n"
	1092	locat=input; exit
	1093	else
	1094	transin[$i]="unavailable"
	1095	fi
	1096	else
	1097
	1098	# ZYKLUSNUMMER FESTSTELLEN
	1099	ls -1 -d $filename > filelist 2>/dev/null
	1100	ls -1 -d $filename.* >> filelist 2>/dev/null
	1101	while read zeile
	1102	do
	1103	cycle=$(print $zeile \| cut -f2 -d".")
	1104	if [[ "$cycle" = "$zeile" ]]
	1105	then
	1106	(( icycle = 0 ))
	1107	elif [[ "$cycle" = "${extin[$i]}" ]]
	1108	then
	1109	(( icycle = 0 ))
	1110	else
	1111	(( icycle = $cycle ))
	1112	fi
	1113	if (( icycle > maxcycle ))
	1114	then
	1115	(( maxcycle = icycle ))
	1116	file_to_be_used=$zeile
	1117	fi
	1118	done <filelist
	1119	rm filelist
	1120
	1121	# EVTL. ZYKLUSNUMMER AN DATEINAMEN ANFUEGEN
	1122	if (( maxcycle > 0 ))
	1123	then
	1124	if [[ "${extin[$i]}" != " " && "${extin[$i]}" != "" ]]
	1125	then
	1126	filename=${filename}.$maxcycle.${extin[$i]}
	1127	else
	1128	filename=${filename}.$maxcycle
	1129	fi
	1130	else
	1131	if [[ "${extin[$i]}" != " " && "${extin[$i]}" != "" ]]
	1132	then
	1133	filename=${filename}.${extin[$i]}
	1134	fi
	1135	fi
	1136
	1137	# DATEINAMEN OHNE PFAD ABER MIT ZYKLUSNUMMER ABSPEICHERN,
	1138	# DA SPAETER BEI RUECKSPEICHERN VOM ARCHIVSYSTEM EVTL. BENOETIGT
	1139	absnamein[$i]=$filename
	1140	if (( maxcycle > 0 ))
	1141	then
	1142	if [[ "${actionin[$i]}" = di ]]
	1143	then
	1144	frelin[$i]=${endin[$i]}.$maxcycle
	1145	else
	1146	frelin[$i]=${afname}${endin[$i]}.$maxcycle
	1147	fi
	1148	else
	1149	if [[ "${actionin[$i]}" = di ]]
	1150	then
	1151	frelin[$i]=${endin[$i]}
	1152	else
	1153	frelin[$i]=${afname}${endin[$i]}
	1154	fi
	1155	fi
	1156
	1157	fi
	1158	done
	1159
	1160
	1161	# VOLLSTAENDIGE DATEINAMEN (OHNE $ ODER ~) DER OUTPUT-FILES BILDEN,
	1162	# OUTPUT-DATEIEN AUF VORHANDENSEIN PRUEFEN UND EVTL. HOECHSTE ZYKLUSNUMMER
	1163	# ERMITTELN ODER, FALLS NICHT VORHANDEN, PRUEFEN, OB SIE SICH ANLEGEN LASSEN
	1164	# DIESE AKTIONEN FINDEN NICHT STATT, WENN PROGRAMM AUF REMOTE-MASCHINE
	1165	# RECHNET UND DATEI ANSCHLIESSEND TRANSFERIERT WERDEN SOLL!
	1166	(( i = 0 ))
	1167	while (( i < iout ))
	1168	do
	1169	(( i = i + 1 ))
	1170	if [[ ! ( $fromhost != $localhost && ( "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = tra \|\| "${actionout[$i]}" = trpe ) ) ]]
	1171	then
	1172	if [[ "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = trpe ]]
	1173	then
	1174	actionout[$i]=""
	1175	elif [[ "${actionout[$i]}" = tra ]]
	1176	then
	1177	actionout[$i]=a
	1178	fi
	1179	(( maxcycle = 0 ))
	1180	eval filename=${pathout[$i]}/${fname}${endout[$i]}
	1181	eval catalogname=${pathout[$i]}
	1182	if [[ $(ls $filename* 2>&1 \| grep -c "not found") = 1 \|\| \
	1183	$(ls $filename* 2>&1 \| grep -c "No such file") = 1 \|\| \
	1184	$(ls $filename* 2>&1 \| grep -c "does not exist") = 1 ]]
	1185	then
	1186
	1187	# OUTPUT-DATEI NICHT VORHANDEN. PRUEFEN, OB ANLEGEN MOEGLICH.
	1188	if cat /dev/null > $filename
	1189	then
	1190	rm $filename
	1191	else
	1192
	1193	# PRUEFEN, OB KATALOG VORHANDEN UND EVTL. DIESEN ANLEGEN
	1194	if [[ ! -d $catalogname ]]
	1195	then
	1196	if mkdir -p $catalogname
	1197	then
	1198	printf "\n\n *** directory:"
	1199	printf "\n $catalogname"
	1200	printf "\n was created\n"
	1201	else
	1202	printf "\n\n +++ OUTPUT-file:"
	1203	printf "\n $filename"
	1204	printf "\n cannot be created, because directory does not exist"
	1205	printf "\n and cannot be created either"
	1206	printf "\n"
	1207	locat=output ; exit
	1208	fi 2>/dev/null
	1209	else
	1210	printf "\n\n +++ OUTPUT-file:"
	1211	printf "\n $filename"
	1212	printf "\n cannot be created, although directory exists"
	1213	printf "\n"
	1214	locat=output ; exit
	1215	fi
	1216	fi 2>/dev/null
	1217	else
	1218
	1219	# ZYKLUSNUMMER FESTSTELLEN
	1220	ls -1 -d $filename > filelist 2>/dev/null
	1221	ls -1 -d $filename.* >> filelist 2>/dev/null
	1222	while read zeile
	1223	do
	1224	cycle=$(print $zeile \| cut -f2 -d".")
	1225	if [[ "$cycle" = "$zeile" \|\| "$cycle" = ${extout[$i]} ]]
	1226	then
	1227	(( icycle = 1 ))
	1228	else
	1229	(( icycle = $cycle + 1 ))
	1230	fi
	1231	if (( icycle > maxcycle ))
	1232	then
	1233	(( maxcycle = icycle ))
	1234	fi
	1235	done <filelist
	1236	rm filelist
	1237	fi
	1238
	1239	# EVTL. ZYKLUSNUMMER AN DATEINAMEN ANFUEGEN UND PRUEFEN, OB SICH
	1240	# DATEI AUCH WIRKLICH ANLEGEN LAESST. IM APPEND-FALL MUSS AN DEN
	1241	# HOECHSTEN VORHANDENEN ZYKLUS-ANGEHAENGT WERDEN. ANLAGEPRUEFUNG
	1242	# IST DANN NATUERLICH NICHT ZULAESSIG BZW. MOEGLICH
	1243	if [[ "${actionout[$i]}" != a ]]
	1244	then
	1245	if (( maxcycle > 0 ))
	1246	then
	1247	filename=${filename}.$maxcycle
	1248	if cat /dev/null > $filename
	1249	then
	1250	rm $filename
	1251	else
	1252	printf "\n +++ OUTPUT-file:"
	1253	printf "\n $filename"
	1254	printf "\n cannot be created"
	1255	locat=output ; exit
	1256	fi
	1257	fi
	1258	else
	1259	(( maxcycle = maxcycle - 1 ))
	1260	if (( maxcycle > 0 ))
	1261	then
	1262	filename=${filename}.$maxcycle
	1263	fi
	1264	fi
	1265
	1266	# DATEINAMEN OHNE PFAD ABER MIT ZYKLUSNUMMER ABSPEICHERN,
	1267	# DA SPAETER BEI ABLAGE AUF ARCHIVSYSTEM BZW. FUER
	1268	# DATEI OUTPUT_FILE_CONNECTIONS EVTL. BENOETIGT
	1269	pathout[$i]=$filename
	1270	if (( maxcycle > 0 ))
	1271	then
	1272	frelout[$i]=${fname}${endout[$i]}.$maxcycle
	1273	else
	1274	frelout[$i]=${fname}${endout[$i]}
	1275	fi
	1276
	1277	fi
	1278	done
	1279
	1280
	1281	# PRUEFEN, OB ENTWEDER HAUPTPROGRAMM ODER NUR EIN AUSFUEHRBARES
	1282	# PROGRAMM VEREINBART WURDE (IN DIESEM FALL BRAUCHT IM WEITEREN NICHT
	1283	# UEBERSETZT ZU WERDEN)
	1284	if [[ "$mainprog" = "" && "$executable" = "" ]]
	1285	then
	1286	printf "\n +++ neither main program nor executable defined"
	1287	locat=source; exit
	1288	elif [[ "$mainprog" != "" && "$executable" != "" ]]
	1289	then
	1290	printf "\n +++ main program as well as executable defined"
	1291	locat=source; exit
	1292	elif [[ "$mainprog" = "" && "$executable" != "" ]]
	1293	then
	1294	do_compile=false
	1295	fi
	1296
	1297
	1298	# ALLE ZU UEBERSETZENDEN PROGRAMMTEILE ZUSAMMENSAMMELN
	1299	# BEI BATCH-JOBS IST DIES NICHT NOETIG, WEIL DIE PROGRAMMTEILE BEREITS DURCH
	1300	# DEN MRUN-AUFRUF ERMITTELT SIND, DER DEN BATCH-JOB GENERIERT HAT, UND
	1301	# IM VERZEICHNIS SOURCES_FOR_RUN_... ABGELEGT SIND
	1302	if [[ $do_compile = true && "$SOURCES_COMPLETE" = "" ]]
	1303	then
	1304
[5]	1305	[[ "$source_list" = LM ]] && source_list=LOCALLY_MODIFIED
	1306	[[ "$source_list" = WP ]] && source_list=WRITE_PERMIT
[1]	1307
[5]	1308	if [[ $restart_run != true ]]
[1]	1309	then
	1310	rm -rf SOURCES_FOR_RUN_$fname
	1311	mkdir SOURCES_FOR_RUN_$fname
	1312	fi
	1313
	1314
	1315	# EVTL. ZU UEBERSETZENDE PROGRAMMTEILE DADURCH BESTIMMEN, DASS GEPRUEFT
	1316	# WIRD, WELCHE DATEIEN WRITE-PERMIT BESITZEN (DATEIEN SOLLTEN DESHALB
	1317	# UNTER RCS-KONTROLLE STEHEN). MIT DER VARIABLEN EXCLUDE KOENNEN
	1318	# BESTIMMTE DATEIEN GRUNDSAETZLICH VON DER UEBERSETZUNG AUSGESCHLOSSEN
	1319	# WERDEN. DIES IST NUR BEI MANUELLEM START VON MRUN DURCH DEN BENUTZER
	1320	# MOEGLICH, DA BEI AUTOMATISCHEN RESTARTS TEST DURCH DIE TATSAECHLICH
	1321	# ZU UBERSETZENDEN DATEIEN ERSETZT IST.
	1322	# ALLE ERMITTELTEN DATEIEN WERDEN IM VERZEICHNIS SOURCES_FOR_RUN_...
	1323	# GESAMMELT
[5]	1324	if [[ "$source_list" = WRITE_PERMIT ]]
[1]	1325	then
	1326
	1327	source_list=""
	1328	cd $source_path
	1329
	1330
	1331	# ALLE MOEGLICHEN QUELLCODEDATEIEN AUFLISTEN
	1332	Names=$(ls -1 *.f90 2>&1)
	1333	[[ $(echo $Names \| grep -c '*.f90') = 0 ]] && Filenames="$Names"
	1334	Names=$(ls -1 *.F90 2>&1)
	1335	[[ $(echo $Names \| grep -c '*.F90') = 0 ]] && Filenames="$Filenames $Names"
	1336	Names=$(ls -1 *.F 2>&1)
	1337	[[ $(echo $Names \| grep -c '*.F') = 0 ]] && Filenames="$Filenames $Names"
	1338	Names=$(ls -1 *.f 2>&1)
	1339	[[ $(echo $Names \| grep -c '*.f') = 0 ]] && Filenames="$Filenames $Names"
	1340	Names=$(ls -1 *.c 2>&1)
	1341	[[ $(echo $Names \| grep -c '*.c') = 0 ]] && Filenames="$Filenames $Names"
	1342
	1343
	1344	# DATEIEN MIT WRITE-PERMIT NACH SOURCES_FOR_RUN_... KOPIEREN
	1345	for dateiname in $Filenames
	1346	do
	1347	if [[ -w $dateiname ]]
	1348	then
	1349	if [[ "$exclude" = "" \|\| $(echo $exclude \| grep -c $dateiname) = 0 ]]
	1350	then
	1351	cp $dateiname $working_directory/SOURCES_FOR_RUN_$fname
	1352	source_list=$source_list"$dateiname "
	1353	fi
	1354	fi
	1355	done
	1356
	1357	cd - > /dev/null
	1358
	1359
[5]	1360	elif [[ "$source_list" = LOCALLY_MODIFIED ]]
	1361	then
	1362
	1363	# MODIFIZIERTE DATEIEN DER SVN-ARBEITSKOPIE BESTIMMEN
	1364	source_list=""
	1365	cd $source_path
	1366
	1367
	1368	# PRUEFEN, OB VERZEICHNIS UEBERHAUPT UNTER SVN-KONTROLLE STEHT
	1369	if [[ ! -d .svn ]]
	1370	then
	1371	printf "\n\n +++ source directory"
	1372	printf "\n \"$source_path\" "
	1373	printf "\n is not under control of \"subversion\"."
	1374	printf "\n Please do not use mrun-option \"-s LOCALLY MODIFIED\"\n"
	1375	fi
	1376
	1377
	1378	# ALLE MODIFIZIERTEN QUELLCODEDATEIEN AUFLISTEN
	1379	Filenames=""
	1380	svn status \| while read line
	1381	do
	1382	firstc=`echo $line \| cut -c1`
	1383	if [[ $firstc = M \|\| $firstc = "?" ]]
	1384	then
	1385	Name=`echo "$line" \| cut -c8-`
	1386	extension=`echo $Name \| cut -d. -f2`
	1387	if [[ "$extension" = f90 \|\| "$extension" = F90 \|\| "$extension" = f \|\| "$extension" = F \|\| "$extension" = c ]]
	1388	then
	1389	Filenames="$Filenames "$Name
	1390	fi
	1391	fi
	1392	done
	1393
	1394
	1395	# DATEIEN NACH SOURCES_FOR_RUN_... KOPIEREN
	1396	for dateiname in $Filenames
	1397	do
	1398	cp $dateiname $working_directory/SOURCES_FOR_RUN_$fname
	1399	source_list=$source_list"$dateiname "
	1400	done
	1401
	1402	cd - > /dev/null
	1403
	1404
[1]	1405	# MITTELS OPTION -s ANGEGEBENE DATEIEN NACH SOURCES_FOR_RUN_... KOPIEREN
	1406	# BEI AUTOMATISCHEN FORTSETZUNGSLAEUFEN SIND DORT SCHON ALLE DATEIEN
	1407	# VORHANDEN
[5]	1408	elif [[ "$source_list" != "" && $restart_run != true ]]
[1]	1409	then
	1410
	1411	cd $source_path
	1412
	1413	for filename in $source_list
	1414	do
	1415
	1416	# QUELLTEXT-DATEI DARF KEINE PFADE BEINHALTEN
	1417	if [[ $(print $filename \| grep -c "/") != 0 ]]
	1418	then
	1419	printf "\n +++ source code file: $filename"
	1420	printf "\n must not contain (\"/\") "
	1421	locat=source; exit
	1422	fi
	1423
	1424	if [[ ! -f $filename ]]
	1425	then
	1426	printf "\n +++ source code file: $filename"
	1427	printf "\n does not exist"
	1428	locat=source; exit
	1429	else
	1430	cp $filename $working_directory/SOURCES_FOR_RUN_$fname
	1431	fi
	1432
	1433	done
	1434
	1435	cd - > /dev/null
	1436
	1437	fi
	1438
	1439
	1440	# PRUEFEN, OB ENTWEDER HAUPTPROGRAMM VORHANDEN UND ES EVTL. IN DER
	1441	# LISTE DER ZU UEBERSETZENDEN PROGRAMMTEILE MIT ENTHALTEN IST (WENN
	1442	# NICHT, WIRD ES DIESER LISTE HINZUGEFUEGT)
[5]	1443	if [[ $restart_run != true ]]
[1]	1444	then
	1445
	1446	if [[ ! -f "$source_path/$mainprog" ]]
	1447	then
	1448	printf "\n\n +++ main program: $mainprog"
	1449	printf "\n does not exist in source directory"
	1450	printf "\n \"$source_path\"\n"
	1451	locat=source; exit
	1452	else
	1453	if [[ $(echo $source_list \| grep -c $mainprog) = 0 ]]
	1454	then
	1455	cp $source_path/$mainprog SOURCES_FOR_RUN_$fname
	1456	source_list=${mainprog}" $source_list"
	1457	fi
	1458	fi
	1459	fi
	1460
	1461
	1462	# DATEIEN AUS ZUSAETZLICHEM QUELLVERZEICHNIS HINZUFUEGEN
[5]	1463	if [[ $restart_run != true && "$add_source_path" != "" ]]
[1]	1464	then
	1465
	1466	# GIBT ES DAS VERZEICHNIS UEBERHAUPT?
	1467	if [[ ! -d $add_source_path ]]
	1468	then
	1469	printf "\n\n +++ WARNING: additional source code directory"
	1470	printf "\n \"$add_source_path\" "
	1471	printf "\n does not exist or is not a directory."
	1472	printf "\n No source code will be used from this directory!\n"
	1473	add_source_path=""
	1474	sleep 3
	1475	else
	1476
	1477	cd $add_source_path
	1478
	1479	Names=$(ls -1 *.f90 2>&1)
	1480	[[ $(echo $Names \| grep -c '*.f90') = 0 ]] && AddFilenames="$Names"
	1481	Names=$(ls -1 *.F90 2>&1)
	1482	[[ $(echo $Names \| grep -c '*.F90') = 0 ]] && AddFilenames="$AddFilenames $Names"
	1483	Names=$(ls -1 *.F 2>&1)
	1484	[[ $(echo $Names \| grep -c '*.F') = 0 ]] && AddFilenames="$AddFilenames $Names"
	1485	Names=$(ls -1 *.f 2>&1)
	1486	[[ $(echo $Names \| grep -c '*.f') = 0 ]] && AddFilenames="$AddFilenames $Names"
	1487	Names=$(ls -1 *.c 2>&1)
	1488	[[ $(echo $Names \| grep -c '*.c') = 0 ]] && AddFilenames="$AddFilenames $Names"
	1489
	1490	cd - > /dev/null
	1491	cd SOURCES_FOR_RUN_$fname
	1492
	1493	for dateiname in $AddFilenames
	1494	do
	1495	if [[ -f $dateiname ]]
	1496	then
	1497	printf "\n +++ source code file \"$dateiname\" found in additional"
	1498	printf "\n source code directory \"$add_source_path\" "
	1499	printf "\n as well as in directory \"$source_path\"."
	1500	locat=source; exit
	1501	fi
	1502
	1503	cp $add_source_path/$dateiname .
	1504	source_list="$source_list $dateiname"
	1505
	1506	# Default User-Interface von der Liste entfernen, falls Datei
	1507	# ein User-Interface enthaelt
	1508	if [[ $( cat $dateiname \| grep -c "END SUBROUTINE user_parin" ) != 0 ]]
	1509	then
[50]	1510	if [[ $dateiname != user_interface.f90 && -f user_interface.f90 ]]
[1]	1511	then
	1512	rm -rf user_interface.f90
	1513	source_list=`echo $source_list \| sed -e 's/user_interface.f90//'`
[50]	1514	printf "\n\n *** default \"user_interface.f90\" removed from the files to be translated"
[1]	1515	printf "\n since a user-interface is found in file"
	1516	printf "\n \"$add_source_path/$dateiname\" \n"
	1517	sleep 3
	1518	else
	1519	printf "\n\n *** user-interface file \"$dateiname\" "
	1520	printf "\n added to the files to be translated \n"
	1521	sleep 3
	1522	fi
	1523	fi
	1524	done
	1525
	1526	cd - > /dev/null
	1527	fi
	1528	fi
	1529
	1530
	1531	# ALLE UNTERPROGRAMME, DIE ZU VEREINBARTEN SOFTWAREPAKETEN GEHOEREN,
	1532	# DER LISTE DER ZU UEBERSETZENDEN DATEIEN HINZUFUEGEN
[5]	1533	if [[ $restart_run != true && -n $package_list ]]
[1]	1534	then
	1535
	1536	cd $source_path
	1537
	1538	for package in $package_list
	1539	do
	1540
	1541	[[ $package = "dvrp_graphics+1PE" ]] && package=dvrp_graphics
	1542
	1543	# ERMITTELE ALLE DATEIEN, DIE ZUM PAKET GEHOEREN
	1544	# FEHLERMELDUNGEN WERDEN ABGEFANGEN, DA * AUCH VERZEICHNISSNAMEN
	1545	# LIEFERT
	1546	package_source_list=`grep "defined( __$package " * 2>/dev/null \| cut -f1 -d:`
	1547
	1548
	1549	# FUEGE DIESE DATEIEN DER LISTE DER ZU UEBERSETZENDEN DATEIEN
	1550	# HINZU, FALLS SIE NOCH NICHT DAZUGEHOEREN
	1551	for source_list_name in $package_source_list
	1552	do
	1553	if [[ $(echo $source_list \| grep -c $source_list_name) = 0 ]]
	1554	then
	1555
	1556	# NUR DATEIEN MIT GUELTIGEN ENDUNGEN VERWENDEN
	1557	ending=`echo $source_list_name \| cut -f2 -d.`
	1558	if [[ "$ending" = f90 \|\| "$ending" = F90 \|\| "$ending" = f \|\| "$ending" = F \|\| "$ending" = c ]]
	1559	then
	1560	cp $source_list_name $working_directory/SOURCES_FOR_RUN_$fname
	1561	source_list="$source_list $source_list_name"
	1562	fi
	1563	fi
	1564	done
	1565	done
	1566
	1567	cd - > /dev/null
	1568	fi
	1569
	1570
	1571	# MAKEFILE AUF VORHANDENSEIN PRUEFEN UND KOPIEREN
	1572	# BEI RESTART-LAEUFEN LIEGT ES SCHON IM VERZEICHNIS SOURCES_FOR_RUN...
[5]	1573	if [[ "$use_makefile" = true && "$restart_run" != true ]]
[1]	1574	then
	1575	[[ "$makefile" = "" ]] && makefile=$source_path/Makefile
	1576	if [[ ! -f $makefile ]]
	1577	then
	1578	printf "\n +++ file \"$makefile\" does not exist"
	1579	printf "\n provide this file or set \"use_makefile=false\" in configuration file\n"
	1580	locat=make; exit
	1581	else
	1582	cp $makefile SOURCES_FOR_RUN_$fname/Makefile
	1583	fi
	1584	fi
	1585
	1586	fi # do_compile=true
	1587
	1588
	1589	# FALLS PROGRAMMTEILE UEBERSETZT WERDEN SOLLEN, FOLGEN JETZT EINIGE
	1590	# UEBERPRUEFUNGEN UND DAS SETZEN DER PRAEPROZESSOR-DIREKTIVEN
	1591	if [[ $do_compile = true ]]
	1592	then
	1593
	1594	# PRAEPROZESSOR-DIREKTIVEN ZUM SELEKTIVEN AUSWAEHLEN VON CODETEILEN
	1595	# ZUSAMMENSETZEN
	1596	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
	1597	then
	1598	PPOPTS=-Dibm=ibm
	1599	elif [[ $(echo $localhost \| cut -c1-3) = nec ]]
	1600	then
	1601	PPOPTS=-Dnec
	1602	else
	1603	PPOPTS=-D$localhost
	1604	fi
	1605	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
	1606	then
	1607	[[ -n $cond1 ]] && PPOPTS="$PPOPTS -D$cond1=$cond1"
	1608	[[ -n $cond2 ]] && PPOPTS="$PPOPTS -D$cond2=$cond2"
	1609	if [[ $netcdf_support = true ]]
	1610	then
	1611	PPOPTS="$PPOPTS -Dnetcdf=netcdf"
	1612	[[ $localhost != ibms ]] && PPOPTS="$PPOPTS -Dnetcdf_64bit=netcdf_64bit"
	1613	fi
	1614	if [[ $localhost = ibmy ]]
	1615	then
	1616	PPOPTS="$PPOPTS -Dibmy_special=ibmy_special"
	1617	fi
	1618	else
	1619	[[ -n $cond1 ]] && PPOPTS="$PPOPTS -D$cond1"
	1620	[[ -n $cond2 ]] && PPOPTS="$PPOPTS -D$cond2"
	1621	if [[ $netcdf_support = true ]]
	1622	then
	1623	PPOPTS="$PPOPTS -Dnetcdf"
	1624	[[ $localhost != decalpha && $localhost != lctit ]] && PPOPTS="$PPOPTS -Dnetcdf_64bit"
	1625	fi
	1626	fi
	1627	if [[ -n $package_list ]]
	1628	then
	1629	for package in $package_list
	1630	do
	1631	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
	1632	then
	1633	if [[ $package != "dvrp_graphics+1PE" ]]
	1634	then
	1635	PPOPTS="$PPOPTS -D$package=$package"
	1636	else
	1637	PPOPTS="$PPOPTS -Ddvrp_graphics"
	1638	export use_seperate_pe_for_dvrp_output=true
	1639	fi
	1640	else
	1641	if [[ $package != "dvrp_graphics+1PE" ]]
	1642	then
	1643	PPOPTS="$PPOPTS -D$package"
	1644	else
	1645	PPOPTS="$PPOPTS -Ddvrp_graphics"
	1646	export use_seperate_pe_for_dvrp_output=true
	1647	fi
	1648	fi
	1649	done
	1650	fi
	1651	if [[ -n $cpp_opts ]]
	1652	then
	1653	for popts in $cpp_opts
	1654	do
	1655	PPOPTS="$PPOPTS -D$popts"
	1656	done
	1657	fi
	1658
	1659	# -D ARGUMENTEN EINEN DOPPELTEN UNTERSTRICH VORANSTELLEN
	1660	PPOPTS=`echo " $PPOPTS" \| sed 's/ -D/ -D__/g'`
	1661
	1662	# OPTION ZUM EINSCHALTEN DES PRAEPROZESSORS HINZUFUEGEN
	1663	if [[ $host = decalpha ]]
	1664	then
	1665	C_PPOPTS="-cpp -DMPI_REAL=MPI_DOUBLE_PRECISION -DMPI_2REAL=MPI_2DOUBLE_PRECISION $PPOPTS"
	1666	elif [[ $(echo $host \| cut -c1-3) = ibm ]]
	1667	then
	1668	# blanks in PPOPTS muessen durch "," ersetzt werden
	1669	PPOPTS=`echo $PPOPTS \| sed 's/ -/,-/g'`
	1670	C_PPOPTS="-qsuffix=cpp=f90 -WF,-DMPI_REAL=MPI_DOUBLE_PRECISION,$PPOPTS"
	1671	elif [[ $host = lcmuk ]]
	1672	then
	1673	C_PPOPTS="$PPOPTS -DMPI_REAL=MPI_DOUBLE_PRECISION -DMPI_2REAL=MPI_2DOUBLE_PRECISION"
	1674	elif [[ $host = lctit ]]
	1675	then
	1676	C_PPOPTS="$PPOPTS -Mpreprocess -DMPI_REAL=MPI_DOUBLE_PRECISION -DMPI_2REAL=MPI_2DOUBLE_PRECISION"
	1677	elif [[ $(echo $host \| cut -c1-3) = nec ]]
	1678	then
	1679	C_PPOPTS="-Ep -DMPI_REAL=MPI_REAL8 -DMPI_2REAL=MPI_2REAL8 -DSCFFT=dzfft -DCSFFT=zdfft $PPOPTS"
	1680	else
	1681	C_PPOPTS="$PPOPTS"
	1682	fi
	1683
	1684	else
	1685
	1686
	1687	# BEI LOKALEN RECHNUNGEN PRUEFEN, OB EXECUTABLE VORHANDEN
	1688	if [[ $do_remote = false ]]
	1689	then
	1690	if [[ ! -f $executable ]]
	1691	then
	1692	printf "\n +++ executable file: $executable"
	1693	printf "\n does not exist"
	1694	locat=executable; exit
	1695	fi
	1696	fi
	1697	fi
	1698
	1699
	1700	# JOBMODUS FESTSTELLEN
	1701	if [[ "$ENVIRONMENT" = BATCH && $localhost != lctit \|\| "$QUEUE" != interactive && $localhost = lctit ]]
	1702	then
	1703	jobmo=BATCH
	1704	else
	1705	jobmo=INTERACTIVE
	1706	fi
	1707
	1708
	1709	# HOSTSPEZIFISCHE DEFAULT-COMPILER SETZEN, FALLS NICHT BEREITS
	1710	# DURCH BENUTZER ANDERWEITIG VEREINBART
	1711	if [[ "$compiler_name" = "" ]]
	1712	then
	1713	case $localhost in
[5]	1714	(unics) compiler_name=f77;;
[1]	1715	(lcmuk) if [[ "$cond1" = parallel \|\| "$cond2" = parallel ]]
	1716	then
	1717	compiler_name=mpif90
	1718	else
	1719	compiler_name=ifc
	1720	fi;;
	1721	(lctit) if [[ "$cond1" = parallel \|\| "$cond2" = parallel ]]
	1722	then
	1723	compiler_name=mpif90
	1724	echo ">>> compiler=mpif90"
	1725	else
	1726	compiler_name=pgf95
	1727	echo ">>> compiler=pgf95"
	1728	fi;;
	1729	(nech) compiler_name=sxmpif90;;
	1730	(decalpha) compiler_name=f95;;
	1731	(ibm\|ibmb\|ibmh\|ibms\|ibmy) compiler_name=mpxlf95_r;;
	1732	(*) printf "\n +++ unknown host name: $localhost \n";
	1733	locat=localhost; exit;;
	1734	esac
	1735	fi
	1736
	1737
	1738	# COMPILER AUF NECK UEBERSCHREIBEN
	1739	[[ $localhost = neck ]] && compiler_name=mpif90
	1740
	1741
	1742
	1743	# PRAEPROZESSOR-PFAD BESTIMMEN
	1744	case $localhost in
	1745	(decalpha\|ibm\|ibmb\|ibmh\|ibms\|ibmy\|unics) praeproc=cpp;;
	1746	esac
	1747
	1748
	1749	# TEMPORAEREN KATALOGNAMEN BESTIMMEN
	1750	kennung=$RANDOM
	1751	if [[ "$tmp_user_catalog" = "" ]]
	1752	then
	1753	if [[ $localhost = ibmb \|\| $localhost = ibmh ]]
	1754	then
	1755	tmp_user_catalog=$TMPDIR
	1756	elif [[ $localhost = nech ]]
	1757	then
	1758	tmp_user_catalog=$WRKSHR
	1759	else
	1760	tmp_user_catalog=/tmp
	1761	fi
	1762	fi
	1763	TEMPDIR=$tmp_user_catalog/${usern}.$kennung
	1764
	1765
	1766	# KATALOGNAMEN FUER ZWISCHENSPEICHERUNG VON FORTSETZUNGSLAUFDATEIEN
	1767	# BESTIMMEN
	1768	if [[ "$tmp_data_catalog" = "" ]]
	1769	then
	1770	if [[ $localhost = ibmb \|\| $localhost = ibmh ]]
	1771	then
	1772	tmp_data_catalog=$WORK/mrun_restart_data
	1773	elif [[ $localhost = nech ]]
	1774	then
	1775	tmp_data_catalog=$WRKSHR/mrun_restart_data
	1776	else
	1777	tmp_data_catalog=/tmp/mrun_restart_data
	1778	fi
	1779	fi
	1780
	1781
	1782	# EVENTUELL BEI LOKALEN RECHNUNGEN $-ZEICHEN IN ENVIRONMENT-VARIABLEN
	1783	# ERSETZEN
	1784	if [[ $do_remote = false && $do_compile = true ]]
	1785	then
	1786	eval fopts=\"$fopts\"
	1787	eval lopts=\"$lopts\"
	1788	fi
	1789
	1790
	1791
	1792	# COMPILE- UND LINK-OPTIONEN BESTIMMEN
	1793	FOPTS="$fopts"
	1794	LOPTS="$lopts"
	1795	ROPTS="$ropts"
	1796	if [[ ( $(echo $host \| cut -c1-3) = nec \|\| $(echo $host \| cut -c1-3) = ibm \|\| $host = lctit ) && -n $numprocs ]]
	1797	then
	1798	XOPT="-X $numprocs"
	1799	fi
	1800
	1801
	1802	# BEI VERWENDUNG VON DVRP-SOFTWARE MUSS ENTSPECHENDE GRAFIK-BIBLIOTHEK
	1803	# MIT EINGEBUNDEN WERDEN
	1804	if [[ -n $package_list ]]
	1805	then
	1806	if [[ $(echo $package_list \| grep -c dvrp_graphics) != 0 ]]
	1807	then
	1808
[14]	1809	# DVRP-GRAFIK GIBT ES NUR AUF DER IBM AM HLRN, AUF NECH/NECK UND
[1]	1810	# DEM NOTEBOOK SCIROCCO
[14]	1811	if [[ $host != ibmh && $host != nech && $host != neck && $host != lcmuk && "$local_compile" != true ]]
[1]	1812	then
	1813	printf "\n"
	1814	printf "\n +++ option -p with package \"dvrp_graphics\" only allowed on nech and ibmh"
	1815	locat=parameter; exit
	1816	fi
	1817	if [[ $host = ibmh ]]
	1818	then
	1819	if [[ $cond1 = debug \|\| $cond2 = debug ]]
	1820	then
	1821	FOPTS="-I/home/h/hzazchmi/lib/debug $FOPTS"
	1822	LOPTS="$LOPTS -L/home/h/hzazchmi/lib/debug -lDVRP2 -lftp"
	1823	else
	1824	FOPTS="-I/home/h/nikevita/lib_stable/optimize $FOPTS"
	1825	LOPTS="$LOPTS -L/home/h/nikevita/lib_stable/optimize -lDVRP2 -lftp"
	1826	fi
	1827	elif [[ $host = nech ]]
	1828	then
[14]	1829	FOPTS="-I/import/ds9b/ipf2/b/b323014/lib/optimize $FOPTS"
	1830	LOPTS="$LOPTS -L/import/ds9b/ipf2/b/b323014/lib/optimize -lDVRP2 -lftp"
	1831	elif [[ $host = neck ]]
	1832	then
	1833	FOPTS="-I/home/DSRC/NC/tatuyama/pub/dvrp $FOPTS"
	1834	LOPTS="$LOPTS -L/home/DSRC/NC/tatuyama/pub/dvrp -lDVRP2 -lftp"
[1]	1835	elif [[ $host = lcmuk ]]
	1836	then
	1837	FOPTS="-I/usr/local/lib/dvrp/optimize $FOPTS"
	1838	LOPTS="$LOPTS -L/usr/local/lib/dvrp/optimize -lDVRP2 -lftp"
	1839	fi
	1840	fi
	1841	fi
	1842
	1843
	1844	# EVTL. EINBINDEN DER NETCDF-BIBLIOTHEK
	1845	if [[ $netcdf_support = true ]]
	1846	then
	1847	case $host in
	1848	(decalpha) FOPTS="-I${netcdf_path}/include $FOPTS"
	1849	LOPTS="$LOPTS -L${netcdf_path}/lib -lnetcdf";;
	1850	(ibmb\|ibmh) FOPTS="-I ${netcdf_path}/include-64 $FOPTS"
	1851	LOPTS="$LOPTS -L${netcdf_path}/lib -lnetcdf";;
	1852	(ibms) FOPTS="-I /applic/netcdf64/src/f90 $FOPTS"
	1853	LOPTS="$LOPTS -L${netcdf_path} -lnetcdf";;
	1854	(ibmy) FOPTS="-I ${netcdf_path}/include $FOPTS"
	1855	LOPTS="$LOPTS -L${netcdf_path}/lib -lnetcdf";;
	1856	(lcmuk\|nech\|neck) FOPTS="-I ${netcdf_path}/include $FOPTS"
	1857	LOPTS="$LOPTS -L${netcdf_path}/lib -lnetcdf";;
	1858	(lctit) FOPTS="-I ${netcdf_path}/src/f90 $FOPTS"
	1859	LOPTS="$LOPTS -L${netcdf_path}/src/libsrc -lnetcdf";;
	1860
	1861	esac
	1862	fi
	1863
	1864	# PRUEFEN DER CPU-ZEIT. (CPUMAX WIRD ALS ENV-VARIABLE VOM HAUTPRO-
	1865	# GRAMM BENOETIGT
	1866	done=false
	1867	while [[ $done = false ]]
	1868	do
	1869	cputime=$cpumax
	1870	if (( $cputime == 0 ))
	1871	then
	1872	printf "\n +++ cpu-time is undefined"
	1873	printf "\n >>> Please type CPU-time in seconds as INTEGER:"
	1874	printf "\n >>> "
	1875	read cputime 1>/dev/null 2>&1
	1876	else
	1877	done=true
	1878	fi
	1879	cpumax=$cputime
	1880	done
	1881
	1882	(( minuten = cputime / 60 ))
	1883	(( sekunden = cputime - minuten * 60 ))
	1884
	1885
	1886	# PRUEFEN DER KERNSPEICHERANFORDERUNG
	1887	if [[ $do_batch = true ]]
	1888	then
	1889	done=false
	1890	while [[ $done = false ]]
	1891	do
	1892	if (( memory == 0 ))
	1893	then
	1894	printf "\n +++ memory demand is undefined"
	1895	printf "\n >>> Please type memory in MByte per process as INTEGER:"
	1896	printf "\n >>> "
	1897	read memory 1>/dev/null 2>&1
	1898	else
	1899	done=true
	1900	fi
	1901	done
	1902	fi
	1903
	1904
	1905	# PRUEFEN, OB FUER REMOTE-RECHNUNGEN EIN BENUTZERNAME ANGEGEBEN WURDE
	1906	if [[ $do_remote = true && -z $remote_username ]]
	1907	then
	1908	while [[ -z $remote_username ]]
	1909	do
	1910	printf "\n +++ username on remote host \"$host\" is undefined"
	1911	printf "\n >>> Please type username:"
	1912	printf "\n >>> "
	1913	read remote_username
	1914	done
	1915	mc="$mc -u$remote_username"
	1916	fi
	1917
	1918	###########################################################################
	1919	# HEADER-AUSGABE
	1920	###########################################################################
	1921
	1922
	1923	calltime=$(date)
	1924	printf "\n"
	1925	# [[ $silent = false ]] && clear
	1926	printf "#--------------------------------------------------------------# \n"
	1927	printf "\| $version$calltime \| \n"
	1928	printf "\| \| \n"
	1929	spalte1="called on:"; spalte2=$localhost_realname
	1930	printf "\| $spalte1$spalte2 \| \n"
	1931	if [[ $local_compile = false ]]
	1932	then
	1933	if [[ $do_remote = true ]]
	1934	then
	1935	spalte1="execution on:"; spalte2="$host (username: $remote_username)"
	1936	else
	1937	spalte1="execution on:"; spalte2="$host ($localhost_realname)"
	1938	fi
	1939	else
	1940	spalte1="compiling test only!"; spalte2=""
	1941	fi
	1942	printf "\| $spalte1$spalte2 \| \n"
	1943	if [[ -n $numprocs ]]
	1944	then
	1945	spalte1="number of PEs:"; spalte2=$numprocs
	1946	printf "\| $spalte1$spalte2 \| \n"
	1947	fi
	1948	if [[ -n $tasks_per_node ]]
	1949	then
	1950	spalte1="tasks per node:"; spalte2="$tasks_per_node (number of nodes: $nodes)"
	1951	printf "\| $spalte1$spalte2 \| \n"
	1952	fi
	1953	if [[ $threads_per_task != 1 ]]
	1954	then
	1955	spalte1="threads per task:"; spalte2="$threads_per_task"
	1956	printf "\| $spalte1$spalte2 \| \n"
	1957	fi
	1958	printf "\| \| \n"
	1959	if [[ $do_compile = true ]]
	1960	then
	1961	spalte1=cpp-directives:; spalte2=$C_PPOPTS
	1962	printf "\| $spalte1$spalte2 \| \n"
	1963	zeile=$(echo "$C_PPOPTS" \| cut -c41-)
	1964	while [[ "$zeile" != "" ]]
	1965	do
	1966	spalte1=""
	1967	spalte2=$zeile
	1968	printf "\| $spalte1$spalte2 \| \n"
	1969	zeile=$(echo "$zeile" \| cut -c41-)
	1970	done
	1971
	1972	spalte1=compiler-options:; spalte2="$FOPTS $MODULE_OPTIONS"
	1973	printf "\| $spalte1$spalte2 \| \n"
	1974	zeile=$(echo "$FOPTS $MODULE_OPTIONS" \| cut -c41-)
	1975	while [[ "$zeile" != "" ]]
	1976	do
	1977	spalte1=""
	1978	spalte2=$zeile
	1979	printf "\| $spalte1$spalte2 \| \n"
	1980	zeile=$(echo "$zeile" \| cut -c41-)
	1981	done
	1982
	1983	spalte1=linker-options:; spalte2=$LOPTS
	1984	printf "\| $spalte1$spalte2 \| \n"
	1985	zeile=$(echo "$LOPTS" \| cut -c41-)
	1986	while [[ "$zeile" != "" ]]
	1987	do
	1988	spalte1=""
	1989	spalte2=$zeile
	1990	printf "\| $spalte1$spalte2 \| \n"
	1991	zeile=$(echo "$zeile" \| cut -c41-)
	1992	done
	1993
	1994	spalte1="main program":; spalte2=$mainprog
	1995	printf "\| $spalte1$spalte2 \| \n"
	1996	if [[ "$use_makefile" = true ]]
	1997	then
	1998	spalte1="using \"make\" for com"; spalte2="piling and linking"
	1999	printf "\| $spalte1$spalte2 \| \n"
	2000	fi
	2001	# if [[ $vtk_graphics = true ]]
	2002	# then
	2003	# spalte1=""; spalte2="wird in C++ - Programm eingebunden (vtk)"
	2004	# printf "\| $spalte1$spalte2 \| \n"
	2005	# fi
	2006	else
	2007	spalte1=executable:; spalte2=$executable
	2008	printf "\| $spalte1$spalte2 \| \n"
	2009	fi
	2010	printf "\| \| \n"
	2011	spalte1="base name of files":; spalte2=$fname
	2012	printf "\| $spalte1$spalte2 \| \n"
	2013	if [[ $fname != $afname ]]
	2014	then
	2015	spalte1="base name of input files":; spalte2=$afname
	2016	printf "\| $spalte1$spalte2 \| \n"
	2017	fi
	2018	spalte1="INPUT control list":; spalte2=$input_list
	2019	printf "\| $spalte1$spalte2 \| \n"
	2020	spalte1="OUTPUT control list":; spalte2=$output_list
	2021	printf "\| $spalte1$spalte2 \| \n"
	2022
	2023	if [[ $do_batch = true \|\| "$LOADLBATCH" = yes ]]
	2024	then
	2025	spalte1="memory demand / PE":; spalte2="$memory MB"
	2026	printf "\| $spalte1$spalte2 \| \n"
	2027	spalte1=CPU-time:; spalte2="$minuten:$sekunden"
	2028	printf "\| $spalte1$spalte2 \| \n"
	2029	fi
	2030
	2031	if [[ $do_compile = true ]]
	2032	then
	2033	printf "\| \| \n"
	2034	printf "\| Files to be compiled: \| \n"
	2035	zeile=$source_list
	2036	while [[ "$zeile" != "" ]]
	2037	do
	2038	spalte3=$zeile
	2039	printf "\| $spalte3 \| \n"
	2040	zeile=$(echo "$zeile" \| cut -c61-)
	2041	done
	2042	fi
	2043	printf "#--------------------------------------------------------------#"
	2044
	2045
	2046
	2047	# BEDINGTE AUSGABE DER DATEIVERBINDUNGEN
	2048	if [[ $do_trace = true ]]
	2049	then
	2050	(( i = 0 ))
	2051	while (( i < iin ))
	2052	do
	2053	(( i = i + 1 ))
	2054	if (( i == 1 ))
	2055	then
	2056	printf "\n\n >>> INPUT-file assignments:\n"
	2057	fi
	2058	printf "\n ${localin[$i]} : ${absnamein[$i]}"
	2059	done
	2060	(( i = 0 ))
	2061	while (( i < iout ))
	2062	do
	2063	(( i = i + 1 ))
	2064	if (( i == 1 ))
	2065	then
	2066	printf "\n\n >>> OUTPUT-file assignments:\n"
	2067	fi
	2068	printf "\n ${localout[$i]} : ${pathout[$i]}"
	2069	done
	2070	(( i = 0 ))
	2071	while (( i < iic ))
	2072	do
	2073	(( i = i + 1 ))
	2074	if (( i == 1 ))
	2075	then
	2076	printf "\n\n >>> INPUT-commands:\n"
	2077	fi
	2078	printf "\n ${in_command[$i]}"
	2079	done
	2080	(( i = 0 ))
	2081	while (( i < ioc ))
	2082	do
	2083	(( i = i + 1 ))
	2084	if (( i == 1 ))
	2085	then
	2086	printf "\n\n >>> OUTPUT-commands:\n"
	2087	fi
	2088	printf "\n ${out_command[$i]}"
	2089	done
	2090	fi
	2091
	2092
	2093	# ABFRAGEN BEI AUFRUF AUF LOKALER MASCHINE
	2094	if [[ $remotecall = false && $silent = false && $jobmo != BATCH ]]
	2095	then
	2096	antwort=dummy
	2097	printf "\n\n"
	2098	while [[ "$antwort" != y && "$antwort" != Y && "$antwort" != n && "$antwort" != N ]]
	2099	do
	2100	printf " >>> everything o.k. (y/n) ? "
	2101	read antwort
	2102	done
	2103	if [[ $antwort = n \|\| $antwort = N ]]
	2104	then
	2105	locat=user_abort; (( iec = 0 )); exit
	2106	fi
	2107	if [[ $do_batch = true ]]
	2108	then
	2109	printf " >>> batch-job will be created and submitted"
	2110	else
	2111	if [[ $local_compile = false ]]
	2112	then
	2113	printf " >>> MRUN will now continue to execute on this machine"
	2114	else
	2115	printf " >>> a test compilation will now be carried out on this machine"
	2116	fi
	2117	fi
	2118	fi
	2119
	2120
	2121
	2122
	2123	# FALLS AUF DIESER MASCHINE GERECHNET WERDEN SOLL, WERDEN JETZT ENTSPRE-
	2124	# CHENDE AKTIONEN DURCHGEFUEHRT
	2125	if [[ $do_batch = false ]]
	2126	then
	2127
	2128
	2129	# TEMPORAEREN KATALOG ERZEUGEN
	2130	mkdir -p $TEMPDIR
	2131	chmod go+rx $TEMPDIR
	2132	tmpcreate=true
	2133
	2134
	2135	# SAEMTLICHE QUELLTEXT-DATEIEN BZW. AUSFUEHRBARES PROGRAMM IN
	2136	# TEMPORAERES VERZEICHNIS KOPIEREN
	2137	if [[ $do_compile = true ]]
	2138	then
	2139
	2140	# ON NEC, COMPILATION IS DONE ON HOST CROSS VIA CROSS COMPILING
	2141	# CREATE A TEMPORARY DIRECTORY ON THAT MACHINE (HOME MOUNTED VIA NFS)
	2142	if [[ $localhost = nech ]]
	2143	then
	2144	TEMPDIR_COMPILE=$HOME/work/${usern}.$kennung
	2145	if mkdir -p $TEMPDIR_COMPILE
	2146	then
	2147	printf "\n *** \"$TEMPDIR_COMPILE\" "
	2148	printf "\n is generated as temporary directory for cross compiling\n"
	2149	else
	2150	printf "\n +++ creating directory \"$TEMPDIR_COMPILE\" "
	2151	printf "\n needed for cross compilation failed"
	2152	locat=compile
	2153	exit
	2154	fi
	2155	else
	2156	TEMPDIR_COMPILE=$TEMPDIR
	2157	fi
	2158
	2159	if [[ "$use_makefile" = true ]]
	2160	then
	2161
	2162	# PFADNAMEN FUER DAS MAKE-DEPOSITORY ERMITTELN
	2163	line=""
	2164	grep "%depository_path" $config_file \| while read line
	2165	do
	2166	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
	2167	then
	2168	if [[ "$(echo $line \| cut -d" " -s -f3)" = "" ]]
	2169	then
	2170	global_depository_path=`echo $line \| cut -d" " -s -f2`
	2171	fi
	2172	fi
	2173	done
	2174
	2175	line=""
	2176	grep " $localhost" $config_file \| grep "%depository_path" \| while read line
	2177	do
	2178	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
	2179	then
	2180	local_depository_path=`echo $line \| cut -d" " -s -f2`
	2181	fi
	2182	done
	2183
	2184	if [[ "$local_depository_path" = "" ]]
	2185	then
	2186	if [[ "$global_depository_path" != "" ]]
	2187	then
	2188	local_depository_path=$global_depository_path
	2189	else
	2190	printf "\n\n +++ no depository path found in configuration file"
	2191	printf "\n for local host \"$localhost\" "
	2192	printf "\n please set \"\%depository_path\" in configuration file\n"
	2193	locat=config_file; exit
	2194	fi
	2195	fi
	2196	eval local_depository_path=$local_depository_path
	2197
	2198	basename=`print $mainprog \| cut -f1 -d"."`
	2199	eval make_depository=${local_depository_path}/${basename}_current_version.tar
	2200	if [[ ! -f $make_depository ]]
	2201	then
	2202	printf "\n"
	2203	printf "\n *** WARNING: make depository \"$make_depository\" not found"
	2204	printf "\n \"make\" will fail, if the Makefile or other source files are missing\n"
	2205	else
	2206	cp $make_depository $TEMPDIR_COMPILE
	2207	cd $TEMPDIR_COMPILE
[5]	2208	tar -xf $make_depository > /dev/null 2>&1
[1]	2209	cd - > /dev/null
	2210	fi
	2211
	2212	cp SOURCES_FOR_RUN_$fname/* $TEMPDIR_COMPILE
	2213
	2214	# FALLS USER-INTERFACE VORHANDEN UND AUF DATEI MIT ANDEREM NAMEN
	2215	# ALS user_interface.f90 LIEGT, DIESEN GEAENDERTEN NAMEN INS
	2216	# MAKEFILE EINTRAGEN
	2217	cd $TEMPDIR_COMPILE
	2218	interface_file=`grep -l "END SUBROUTINE user_parin" $source_list`
	2219	if [[ "$interface_file" != "" ]]
	2220	then
	2221	interface_file=`echo $interface_file \| cut -d"." -f1`
	2222	mv Makefile Makefile_old
	2223	sed "s/user_interface/$interface_file/g" Makefile_old > Makefile
	2224	fi
	2225	cd - > /dev/null
	2226	fi
	2227	else
	2228	cp $executable ${TEMPDIR}/a.out
	2229	fi
	2230
	2231
	2232	# WECHSEL IN TEMPORAEREN KATALOG
	2233	cd $TEMPDIR
	2234	printf "\n *** changed to temporary directory: $TEMPDIR"
	2235
	2236
	2237	# OUTPUT-DATEI-VERBINDUNGEN AUF TEMPORAERER DATEI ABLEGEN
	2238	# DIESE DATEI KANN VON SPAETER AUFZURUFENDEN BENUTZERPROZEDUREN GELESEN
	2239	# WERDEN, UM ZU LOKALEN DATEINAMEN GEHOERENDE PERMANENTE NAMEN ZU
	2240	# ERMITTELN
	2241	(( i = 0 ))
	2242	while (( i < iout ))
	2243	do
	2244	(( i = i + 1 ))
	2245	if [[ "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = tra \|\| "${actionout[$i]}" = trpe ]]
	2246	then
	2247	printf "${localout[$i]} ${actionout[$i]}\n${pathout[$i]}\n${localhost}_${fname}${endout[$i]}\n" >> OUTPUT_FILE_CONNECTIONS
	2248	else
	2249	printf "${localout[$i]} ${actionout[$i]}\n${pathout[$i]}\n${frelout[$i]}\n" >> OUTPUT_FILE_CONNECTIONS
	2250	fi
	2251	done
	2252
	2253
	2254	# EVTL. UEBERSETZUNGSAKTIONEN STARTEN
	2255	if [[ $do_compile = true ]]
	2256	then
	2257
	2258
	2259	# COMPILING WITH MAKE (ON NEC COMPILER IS CALLED ON HOST CROSS)
	2260	if [[ "$use_makefile" = true ]]
	2261	then
	2262	printf "\n\n\n *** compilation starts \n$striche\n"
	2263	printf " *** compilation with make using following options:\n"
	2264	printf " compilername: $compiler_name\n"
	2265	printf " options: $FOPTS\n"
	2266	printf " preprocessor-directives: $C_PPOPTS \n"
	2267	printf " linker-options: $LOPTS \n"
	2268	printf " source code files: $source_list \n"
	2269
	2270	if [[ $localhost = nech ]]
	2271	then
	2272	ssh 136.172.44.192 -l $usern ". /SX/opt/etc/initsx.sh; cd \$HOME/work/${usern}.$kennung; sxmake -f Makefile PROG=a.out F90=$compiler_name COPT=\"$C_PPOPTS\" F90FLAGS=\"$FOPTS\" LDFLAGS=\"$LOPTS\" "
	2273	cp $TEMPDIR_COMPILE/a.out .
	2274	[[ $? != 0 ]] && compile_error=true
	2275	rm -rf $TEMPDIR_COMPILE
	2276	else
	2277	make -f Makefile PROG=a.out F90=$compiler_name COPT="$C_PPOPTS" F90FLAGS="$FOPTS" LDFLAGS="$LOPTS"
	2278	fi
	2279
	2280	# UEBERSETZUNG "VON HAND" (OHNE MAKE)
	2281	else
	2282
	2283
	2284	# UEBERSETZUNG DER QUELLTEXT-DATEIEN UND DES HAUPTPROGRAMMS
	2285	# $CPPOPTS FUER CPP-PRAEPROZESSOR WURDEN OBEN BESTIMMT
	2286	printf "\n\n\n *** compilation starts \n$striche\n"
	2287
	2288
	2289	# VORWEG EVTL. UEBERSETZUNG VON PROGRAMMTEILEN MIT SPEZIELLEN
	2290	# COMPILERN UND/ODER COMPILEROPTIONEN. DIESE WERDEN BEI DER SPAETEREN
	2291	# EIGENTLICHEN UEBERSETZUNG ALS OBJECT-FILES EINGEBUNDEN
	2292	new_source_list=""
	2293	for filename in $source_list
	2294	do
	2295
	2296	basename=`print $filename \| cut -f1 -d"."`
	2297
	2298	# EVTL. SPEZIELLEN COMPILER FUER UP BESTIMMEN
	2299	comp_var=$(eval echo \$comp_$basename) # \$ liefert evtl. fuer source alternativ vereinbarten Compiler
	2300	comp_opt_var=$(eval echo \$$basename) # \$$ liefert evtl. fuer source vereinbarte Compiler-Environment-Variable
	2301
	2302	if [[ "$comp_var" = "" && "$comp_opt_var" = "" ]]
	2303	then
	2304	new_source_list="$new_source_list "$filename
	2305	else
	2306
	2307	if [[ "$comp_var" = "" ]]
	2308	then
	2309	SPECIAL_COMPILER=$compiler_name
	2310	else
	2311	SPECIAL_COMPILER=$comp_var
	2312	fi
	2313
	2314	if [[ "$comp_opt_var" = "" ]]
	2315	then
	2316	SPECIAL_FOPTS=$FOPTS
	2317	else
	2318	SPECIAL_FOPTS="$parallel_options $(eval echo \$$comp_opt_var)"
	2319	fi
	2320
	2321	printf " *** compiling of $filename with special compiler call: $SPECIAL_COMPILER $CPPOPTS -c $SPECIAL_FOPTS \n"
	2322	$SPECIAL_COMPILER $C_PPOPTS -c $SPECIAL_FOPTS $MODULE_OPTIONS $filename
	2323	if [[ $? != 0 ]]
	2324	then
	2325	printf "\n +++ compiling error occured"
	2326	locat=compile
	2327	exit
	2328	fi
	2329	new_source_list="$new_source_list "${basename}.o
	2330	fi
	2331	done
	2332	source_list="$new_source_list"
	2333
	2334
	2335	# EIGENTLICHE UEBERSETZUNG MIT DEN NORMALEN OPTIONEN
	2336	printf " *** compilation with standard options: $compiler_name $FOPTS $MODULE_OPTIONS \n"
	2337	printf " preprocessor-directives: $C_PPOPTS \n"
	2338	printf " linker-options: $LOPTS \n"
	2339	printf " source code files: $source_list \n"
[5]	2340
	2341	$compiler_name $C_PPOPTS $FOPTS $MODULE_OPTIONS $LOPTS $source_list
	2342
[1]	2343	fi
	2344	if [[ $? != 0 \|\| "$compile_error" = true \|\| "$module_compile_error" = true ]]
	2345	then
	2346	printf "\n +++ error occured while compiling or linking"
	2347	locat=compile
	2348	exit
	2349	else
	2350	printf "$striche\n *** compilation finished \n"
	2351	fi
	2352	fi
	2353
	2354
	2355	# FALLS NUR TESTWEISE KOMPILIERT WERDEN SOLLTE, IST MRUN JETZT FERTIG
	2356	if [[ $local_compile = true ]]
	2357	then
	2358	cd $HOME
	2359	rm -rf $TEMPDIR
	2360	locat=local_compile; exit
	2361	fi
	2362
	2363
	2364	# BEREITSTELLEN DER INPUT-DATEIEN
	2365	# SCHLEIFE UEBER ALLE VOM BENUTZER ANGEGEBENEN DATEIEN
	2366	(( i = 0 ))
	2367	while (( i < iin ))
	2368	do
	2369	(( i = i + 1 ))
	2370	if (( i == 1 ))
	2371	then
	2372	printf "\n\n *** providing INPUT-files:\n$striche"
	2373	fi
	2374
	2375
	2376	# OPTIONALE DATEIEN BEI NICHTVORHANDENSEIN UEBERGEHEN
	2377	if [[ "${transin[$i]}" = unavailable ]]
	2378	then
	2379	if [[ "${extin[$i]}" = "" \|\| "${extin[$i]}" = " " ]]
	2380	then
	2381	printf "\n +++ WARNING: input file \"${pathin[$i]}/${afname}${endin[$i]}\" "
	2382	printf "\n is not available!"
	2383	else
	2384	printf "\n +++ WARNING: input file \"${pathin[$i]}/${afname}${endin[$i]}.${extin[$i]}\" "
	2385	printf "\n is not available!"
	2386	fi
	2387	continue
	2388	fi
	2389
	2390	# PRUEFEN, OB EINZELDATEI ODER DATEI PRO PROZESSOR
	2391	files_for_pes=false; datentyp=file
	2392	if [[ "${actionin[$i]}" = pe && -n $numprocs ]]
	2393	then
	2394	files_for_pes=true; datentyp=directory
	2395	actionin[$i]=""
	2396	elif [[ "${actionin[$i]}" = pe && ! -n $numprocs ]]
	2397	then
	2398	actionin[$i]=""
	2399	elif [[ "${actionin[$i]}" = arpe && -n $numprocs ]]
	2400	then
	2401	files_for_pes=true; datentyp=directory
	2402	actionin[$i]="ar"
	2403	elif [[ "${actionin[$i]}" = arpe && ! -n $numprocs ]]
	2404	then
	2405	actionin[$i]="ar"
	2406	elif [[ "${actionin[$i]}" = flpe && -n $numprocs ]]
	2407	then
	2408	files_for_pes=true; datentyp=directory
	2409	actionin[$i]="fl"
	2410	elif [[ "${actionin[$i]}" = flpe && ! -n $numprocs ]]
	2411	then
	2412	actionin[$i]="fl"
	2413	fi
	2414
	2415	if [[ $files_for_pes = true ]]
	2416	then
	2417	printf "\n >>> INPUT: ${absnamein[$i]}/.... to ${localin[$i]}"
	2418	else
	2419	printf "\n >>> INPUT: ${absnamein[$i]} to ${localin[$i]}"
	2420	fi
	2421
	2422	# INPUT-DATEI FUER EINEN FORTSETZUNGSLAUF. ES WIRD GEPRUEFT,
	2423	# OB DIESE DATEI NOCH AUF DEM TEMPORAEREN DATENKATALOG VORHANDEN
	2424	# IST. FALLS NICHT, WIRD VERSUCHT, SIE ANSCHLIESSEND VOM ARCHIV-
	2425	# SERVER ZU HOLEN
	2426	if [[ "${actionin[$i]}" = fl ]]
	2427	then
	2428	printf "\n $datentyp will be fetched from temporary directory \"${tmp_data_catalog}\" !"
	2429	if [[ $files_for_pes = false ]]
	2430	then
	2431	if [[ -f "$tmp_data_catalog/${frelin[$i]}" ]]
	2432	then
	2433	ln $tmp_data_catalog/${frelin[$i]} ${localin[$i]}
	2434	got_tmp[$i]=true
	2435	elif [[ -f "$WORK/${frelin[$i]}" && $ignore_archive_error = true ]]
	2436	then
	2437	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" !"
	2438	printf "\n *** trying to use backup copy in \"$WORK\" "
	2439	cp $WORK/${frelin[$i]} ${localin[$i]}
	2440	else
	2441	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" "
	2442	printf "\n or \"$tmp_data_catalog\" does not exist!"
	2443	printf "\n *** trying to get copy from archive"
	2444	actionin[$i]=ar
	2445	fi
	2446	else
	2447	if [[ -d "$tmp_data_catalog/${frelin[$i]}" ]]
	2448	then
	2449	mkdir ${localin[$i]}
	2450	ln $tmp_data_catalog/${frelin[$i]}/* ${localin[$i]}
	2451	got_tmp[$i]=true
	2452	elif [[ -d "$WORK/${frelin[$i]}" && $ignore_archive_error = true ]]
	2453	then
	2454	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" !"
	2455	printf "\n *** trying to use backup copy in \"$WORK\" "
	2456	cp -r $WORK/${frelin[$i]} ${localin[$i]}
	2457	else
	2458	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" "
	2459	printf "\n or \"$tmp_data_catalog\" does not exist!"
	2460	printf "\n *** trying to get copy from archive"
	2461	actionin[$i]=ar
	2462	fi
	2463	fi
	2464	fi
	2465
	2466
	2467	# DATEI LIEGT AUF ARCHIV-SERVER
	2468	if [[ "${actionin[$i]}" = ar ]]
	2469	then
	2470
	2471	if [[ $files_for_pes = false ]]
	2472	then
	2473	printf "\n file will be restored from archive-system ($archive_system)!"
	2474	else
	2475	printf "\n directory will be restored from archive-system ($archive_system)!"
	2476	fi
	2477
	2478	file_restored=false
	2479
	2480	if [[ $archive_system = asterix ]]
	2481	then
	2482	do_stagein=true
	2483	(( stagein_anz = 0 ))
	2484	while [[ $do_stagein = true ]]
	2485	do
	2486	if [[ $files_for_pes = false ]]
	2487	then
	2488	stagein -O ${frelin[$i]} > STAGEIN_OUTPUT
	2489	else
	2490	stagein -t -O ${frelin[$i]} > STAGEIN_OUTPUT
	2491	fi
	2492	cat STAGEIN_OUTPUT
	2493	if [[ $(grep -c "st.msg:i24" STAGEIN_OUTPUT) != 0 ]]
	2494	then
	2495	file_restored=true
	2496	do_stagein=false
	2497	else
	2498	(( stagein_anz = stagein_anz + 1 ))
	2499	if (( stagein_anz == 10 ))
	2500	then
	2501	printf "\n +++ stagein stoped after 10 tries"
	2502	locat=stage
	2503	exit
	2504	fi
	2505	printf "\n +++ restoring from archive failed, trying again:"
	2506	sleep 900
	2507	fi
	2508	done
	2509	elif [[ $archive_system = DMF ]]
	2510	then
	2511	if [[ $files_for_pes = false ]]
	2512	then
	2513	printf "\n +++ restoring of single files impossible with $archive_system !\n"
	2514	locat=DMF
	2515	exit
	2516	else
	2517	find $ARCHIVE/${frelin[$i]} -type m -print \| dmget
	2518	cp -r $ARCHIVE/${frelin[$i]} $PWD
	2519	file_restored=true
	2520	fi
	2521	elif [[ $archive_system = tivoli ]]
	2522	then
	2523	if [[ $files_for_pes = false ]]
	2524	then
	2525	if [[ $localhost = ibmh ]]
	2526	then
	2527	ssh $usern@hdata.hlrn.de "cp $PERM/${frelin[$i]} $PWD"
	2528	else
	2529	ssh $usern@bdata.hlrn.de "cp $PERM/${frelin[$i]} $PWD"
	2530	fi
	2531	else
	2532	(( inode = 0 ))
	2533	while (( inode < nodes ))
	2534	do
	2535	if [[ $localhost = ibmh ]]
	2536	then
	2537	ssh $usern@hdata.hlrn.de "cd $PWD; tar xf $PERM/${frelin[$i]}/${frelin[$i]}.node_$inode.tar"
	2538	else
	2539	ssh $usern@bdata.hlrn.de "cd $PWD; tar xf $PERM/${frelin[$i]}/${frelin[$i]}.node_$inode.tar"
	2540	fi
	2541	(( inode = inode + 1 ))
	2542	done
	2543	fi
	2544	file_restored=true
	2545	elif [[ $archive_system = ut ]]
	2546	then
	2547	if [[ $files_for_pes = false ]]
	2548	then
	2549	cp $UT/${frelin[$i]} .
	2550	else
	2551	(( inode = 0 ))
	2552	while (( inode < nodes ))
	2553	do
	2554	tar xf $UT/${frelin[$i]}/${frelin[$i]}.node_$inode.tar
	2555	(( inode = inode + 1 ))
	2556	done
	2557	fi
	2558	file_restored=true
	2559	else
	2560	printf "\n +++ archive_system=\"$archive_system\" restore impossible!"
	2561	locat=rearchive
	2562	exit
	2563	fi
	2564
	2565	if [[ $file_restored = true ]]
	2566	then
	2567
	2568	# DATEI AUCH AUF TEMPORAERES DATENVERZEICHNIS LEGEN, DAMIT
	2569	# SIE BEI WEITEREN ZUGRIFFEN NOCH VORHANDEN IST
	2570	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog; chmod g+rx $tmp_data_catalog
	2571	if [[ $files_for_pes = false ]]
	2572	then
	2573	ln -f ${frelin[$i]} $tmp_data_catalog/${frelin[$i]}
	2574	else
	2575	mkdir $tmp_data_catalog/${frelin[$i]}
	2576	ln -f ${frelin[$i]}/* $tmp_data_catalog/${frelin[$i]}
	2577	fi
	2578	got_tmp[$i]=true
	2579
	2580	# DATEI UNTER LOKALEM NAMEN ZUR VERFUEGUNG STELLEN
	2581	mv ${frelin[$i]} ${localin[$i]}
	2582
	2583	fi
	2584	fi
	2585
	2586
	2587	# DATEI LIEGT IM VOM BENUTZER ANGEGEBENEN VERZEICHNIS
	2588	if [[ "${actionin[$i]}" = "" \|\| "${actionin[$i]}" = "di" \|\| "${actionin[$i]}" = "npe" ]]
	2589	then
	2590
	2591	if [[ "${actionin[$i]}" = "npe" && -n $numprocs ]]
	2592	then
	2593
	2594	# DATEI WIRD FUER DIE PROZESSOREN EINES PARALLERECHNERS BEREITGESTELLT
	2595	printf "\n file will be provided for $numprocs processors"
	2596	mkdir ${localin[$i]}
	2597	ival=$numprocs
	2598	(( ii = 0 ))
	2599	while (( ii <= ival-1 ))
	2600	do
	2601	if (( ii < 10 ))
	2602	then
	2603	cp ${absnamein[$i]} ${localin[$i]}/_000$ii
	2604	elif (( ii < 100 ))
	2605	then
	2606	cp ${absnamein[$i]} ${localin[$i]}/_00$ii
	2607	elif (( ii < 1000 ))
	2608	then
	2609	cp ${absnamein[$i]} ${localin[$i]}/_0$ii
	2610	else
	2611	cp ${absnamein[$i]} ${localin[$i]}/_$ii
	2612	fi
	2613	(( ii = ii + 1 ))
	2614	done
	2615
	2616	else
	2617
	2618	if [[ $files_for_pes = true ]]
	2619	then
	2620
	2621	# DIE DEN PROZESSOREN EINES PARALLELRECHNERS ZUGEHOERIGEN
	2622	# DATEIEN WERDEN BEREITGESTELLT, INDEM ZUERST DER GESAMTE
	2623	# KATALOGINHALT KOPIERT UND DANN DIE EINZELNEN DATEIEN
	2624	# PER MOVE UMBENANNT WERDEN
	2625	printf "\n providing $numprocs files for the respective processors"
	2626	mkdir ${localin[$i]}
	2627	cp -r ${absnamein[$i]}/* ${localin[$i]}
	2628
	2629	else
	2630	# BEREITSTELLUNG AUF EINPROZESSORRECHNERN
	2631	cp ${absnamein[$i]} ${localin[$i]}
	2632	fi
	2633	fi
	2634	fi
	2635
	2636	done
	2637	if (( i != 0 ))
	2638	then
	2639	printf "\n$striche\n *** all INPUT-files provided \n"
	2640	fi
	2641
	2642
	2643	# NAMELIST-DATEI MIT WERTEN VON ENVIRONMENT-VARIABLEN ERZEUGEN (ZU
	2644	# LESEN VON PALM)
	2645	cat > ENVPAR << %%END%%
	2646	&envpar run_identifier = '$fname', host = '$localhost',
	2647	write_binary = '$write_binary', tasks_per_node = $tasks_per_node,
	2648	maximum_cpu_time_allowed = ${cpumax}. /
	2649
	2650	%%END%%
	2651
	2652
	2653	# EVENTUELLE INPUT-KOMMANDOS ABARBEITEN
	2654	(( i = 0 ))
	2655	while (( i < iic ))
	2656	do
	2657	(( i = i + 1 ))
	2658	if (( i == 1 ))
	2659	then
	2660	printf "\n\n *** execution of INPUT-commands:\n$striche"
	2661	fi
	2662	printf "\n >>> ${in_command[$i]}"
	2663	eval ${in_command[$i]}
	2664	if (( i == iic ))
	2665	then
	2666	printf "\n$striche\n"
	2667	fi
	2668	done
	2669
	2670
	2671	# VERBLEIBENDE CPU-ZEIT BERECHNEN
	2672	cpurest=${cpumax}.
	2673
	2674
	2675	# PROGRAMMSTART
	2676	printf "\n\n *** execution starts in directory\n \"`pwd`\"\n$striche\n"
	2677	PATH=$PATH:$TEMPDIR
	2678
	2679	if [[ "$cond1" = debug \|\| "$cond2" = debug ]]
	2680	then
	2681	if [[ "$ENVIRONMENT" = BATCH ]]
	2682	then
	2683	printf "\n +++ debug is allowed in interactive mode only"
	2684	locat=debug
	2685	exit
	2686	fi
[5]	2687	if [[ $localhost = decalpha ]]
[1]	2688	then
	2689	dxladebug a.out
	2690	elif [[ $localhost = ibmb \|\| $localhost = ibmh ]]
	2691	then
	2692
	2693	# SETUP THE IBM MPI ENVIRONMENT
	2694	export MP_SHARED_MEMORY=yes
	2695	export AIXTHREADS_SCOPE=S
	2696	export OMP_NUM_THREADS=$threads_per_task
	2697	export AUTHSTATE=files
	2698	export XLFRTEOPTS="nlwidth=132:err_recovery=no" # RECORD-LENGTH OF NAMELIST-OUTPUT
	2699
	2700	# FOLLOWING OPTIONS ARE MANDATORY FOR TOTALVIEW
	2701	export MP_ADAPTER_USE=shared
	2702	export MP_CPU_USE=multiple
	2703	export MP_TIMEOUT=1200
	2704
	2705	unset MP_TASK_AFFINITY
	2706
	2707	# SO FAR, TOTALVIEW NEEDS HOSTFILE MECHANISM FOR EXECUTION
	2708	#(( ii = 1 ))
	2709	#while (( ii <= $numprocs ))
	2710	#do
	2711	# echo $localhost_realname >> hostfile
	2712	# (( ii = ii + 1 ))
	2713	#done
	2714	#export MP_HOSTFILE=hostfile
	2715
	2716	if [[ "$LOADLBATCH" = yes ]]
	2717	then
	2718	totalview poe a.out $ROPTS
	2719	else
	2720	echo totalview poe -a a.out -procs $numprocs -rmpool 0 -nodes 1 $ROPTS
	2721	export TVDSVRLAUNCHCMD=ssh
	2722	totalview poe -a a.out -procs $numprocs -rmpool 0 -nodes 1 $ROPTS
	2723	fi
	2724	else
	2725	printf "\n +++ no debug available on \"$localhost\" "
	2726	printf "\n or not implemented in mrun so far"
	2727	locat=debug
	2728	exit
	2729	fi
	2730	else
	2731	if [[ -n $numprocs ]]
	2732	then
	2733
	2734	# RUNNING THE PROGRAM ON PARALLEL MACHINES
	2735	if [[ $(echo $host \| cut -c1-3) = ibm ]]
	2736	then
	2737	# SETUP THE IBM MPI ENVIRONMENT
	2738	export MP_SHARED_MEMORY=yes
	2739	export AIXTHREAD_SCOPE=S
	2740	export OMP_NUM_THREADS=$threads_per_task
	2741	export XLSMPOPTS="spins=0:yields=0:stack=20000000"
	2742	export AUTHSTATE=files
	2743	export XLFRTEOPTS="nlwidth=132:err_recovery=no" # RECORD-LENGTH OF NAMELIST-OUTPUT
	2744	# export MP_PRINTENV=yes
	2745
	2746	# TUNING-VARIABLEN ZUR VERBESSERUNG DER KOMMUNIKATION
	2747	# ZEIGEN ABER DERZEIT (SEP 04, FEDERATION) KAUM WIRKUNG
	2748	export MP_WAIT_MODE=poll
	2749	[[ $node_usage = not_shared ]] && export MP_SINGLE_THREAD=yes
	2750	# export MP_EAGER_LIMIT=65535
	2751
	2752	# # TESTWEISE FUER TURBOMPI (JAN 05)
	2753	# export MPJ_MTAB=128
	2754	# export MPJ_ALLTOALL=1
	2755	# export MPJ_ALLTOALLV=1
	2756
	2757	if [[ "$LOADLBATCH" = yes ]]
	2758	then
	2759	printf "\n--- Control: OMP_NUM_THREADS = \"$OMP_NUM_THREADS\" \n"
	2760	if [[ "$cond1" = hpmcount \|\| "$cond2" = hpmcount ]]
	2761	then
	2762	/opt/optibm/HPM_2_4_1/bin/hpmcount a.out $ROPTS > aout_output 2>&1
	2763	else
	2764	poe ./a.out $ROPTS > aout_output 2>&1
	2765	fi
	2766	else
	2767	if [[ $localhost = ibmb \|\| $localhost = ibmh \|\| $localhost = ibms ]]
	2768	then
	2769	poe a.out -procs $numprocs -nodes 1 -rmpool 0 $ROPTS > aout_output 2>&1
	2770	elif [[ $localhost = ibmy ]]
	2771	then
	2772	if [[ -f $hostfile ]]
	2773	then
	2774	cp $hostfile hostfile
	2775	else
	2776	(( ii = 1 ))
	2777	while (( ii <= $numprocs ))
	2778	do
	2779	echo $localhost_realname >> hostfile
	2780	(( ii = ii + 1 ))
	2781	done
	2782	fi
	2783	export MP_HOSTFILE=hostfile
	2784	./a.out -procs $tasks_per_node $ROPTS > aout_output 2>&1
	2785	else
	2786	if [[ "$host_file" = "" ]]
	2787	then
	2788	printf "\n +++ no hostfile given in configuration file"
	2789	locat=config_file
	2790	exit
	2791	else
	2792	eval host_file=$host_file
	2793	fi
	2794	export MP_HOSTFILE=$host_file
	2795	poe a.out -procs $numprocs -tasks_per_node $numprocs $ROPTS > aout_output 2>&1
	2796	fi
	2797	fi
	2798	elif [[ $host = nech \|\| $host = neck ]]
	2799	then
	2800	(( ii = nodes ))
	2801	if [[ $ii = 1 ]]
	2802	then
	2803	export F_ERRCNT=0 # acceptable number of errors before program is stopped
	2804	export MPIPROGINF=YES
[61]	2805	# export F_TRACE=YES\|FMT1\|FMT2 # output of ftrace informations to job protocol
[1]	2806	echo "*** execution on single node with mpirun"
	2807	mpirun -np $numprocs ./a.out $ROPTS > aout_output 2>&1
	2808	else
	2809	(( i = 0 ))
	2810	while (( i < ii ))
	2811	do
	2812	echo "-h $i -p $tasks_per_node -e ./mpi_exec_shell" >> multinode_config
	2813	(( i = i + 1 ))
	2814	done
	2815
	2816	echo "#!/bin/sh" > mpi_exec_shell
	2817	echo " " >> mpi_exec_shell
	2818	echo "set -u" >> mpi_exec_shell
	2819	echo "F_ERRCNT=0" >> mpi_exec_shell
	2820	echo "MPIPROGINV=YES" >> mpi_exec_shell
	2821	echo "OMP_NUM_THREADS=$threads_per_task" >> mpi_exec_shell
	2822	echo "cpurest=$cpurest" >> mpi_exec_shell
	2823	echo "fname=$fname" >> mpi_exec_shell
	2824	echo "localhost=$localhost" >> mpi_exec_shell
	2825	echo "return_addres=$return_addres" >> mpi_exec_shell
	2826	echo "return_username=$return_username" >> mpi_exec_shell
	2827	echo "tasks_per_node=$tasks_per_node" >> mpi_exec_shell
	2828	echo "write_binary=$write_binary" >> mpi_exec_shell
	2829	echo "use_seperate_pe_for_dvrp_output=$use_seperate_pe_for_dvrp_output" >> mpi_exec_shell
	2830	echo " " >> mpi_exec_shell
	2831	echo "export F_ERRCNT" >> mpi_exec_shell
	2832	echo "export MPIPROGINV" >> mpi_exec_shell
	2833	echo "export OMP_NUM_THREADS" >> mpi_exec_shell
	2834	echo "export cpurest" >> mpi_exec_shell
	2835	echo "export fname" >> mpi_exec_shell
	2836	echo "export localhost" >> mpi_exec_shell
	2837	echo "export return_addres" >> mpi_exec_shell
	2838	echo "export return_username" >> mpi_exec_shell
	2839	echo "export tasks_per_node" >> mpi_exec_shell
	2840	echo "export write_binary" >> mpi_exec_shell
	2841	echo "export use_seperate_pe_for_dvrp_output" >> mpi_exec_shell
	2842	echo " " >> mpi_exec_shell
	2843	echo "exec ./a.out > aout_output 2>&1" >> mpi_exec_shell
	2844
	2845	chmod u+x mpi_exec_shell
	2846	export MPIPROGINF=YES
	2847	mpirun -f multinode_config &
	2848	wait
	2849
	2850	fi
	2851	elif [[ $host = lcmuk ]]
	2852	then
	2853
	2854	# COPY HOSTFILE FROM SOURCE DIRECTORY OR CREATE IT, IF IT
	2855	# DOES NOT EXIST
	2856	if [[ -f $hostfile ]]
	2857	then
	2858	cp $hostfile hostfile
	2859	else
	2860	(( ii = 1 ))
	2861	while (( ii <= $numprocs / $threads_per_task ))
	2862	do
	2863	echo $localhost_realname >> hostfile
	2864	(( ii = ii + 1 ))
	2865	done
	2866	fi
	2867	(( ii = $numprocs / $threads_per_task ))
	2868	eval zeile=\"`head -n $ii hostfile`\"
	2869	printf "\n *** running on: $zeile"
	2870	export OMP_NUM_THREADS=$threads_per_task
	2871	if [[ $threads_per_task != 1 ]]
	2872	then
	2873	printf "\n threads per task: $threads_per_task"
	2874	fi
	2875	printf "\n\n"
	2876	if [[ $scirocco = true ]]
	2877	then
	2878	mpiexec -machinefile hostfile -n $ii a.out $ROPTS > aout_output 2>&1
	2879	else
	2880	mpirun -machinefile hostfile -np $ii a.out $ROPTS > aout_output 2>&1
	2881	fi
	2882	elif [[ $host = decalpha ]]
	2883	then
	2884	dmpirun -np $numprocs a.out $ROPTS > aout_output 2>&1
	2885	elif [[ $host = lctit ]]
	2886	then
	2887	export runfile=runfile.$kennung
	2888
	2889	echo "cd $PWD" > $runfile
	2890	echo "export OMP_NUM_THREADS=$OMP_NUM_THREADS" >> $runfile
	2891	echo "export cpurest=$cpurest" >> $runfile
	2892	echo "export fname=$fname" >> $runfile
	2893	echo "export localhost=$localhost" >> $runfile
	2894	echo "export return_addres=$return_addres" >> $runfile
	2895	echo "export return_username=$return_username" >> $runfile
	2896	echo "export tasks_per_node=$tasks_per_node" >> $runfile
	2897	echo "export write_binary=$write_binary" >> $runfile
	2898	echo "export use_seperate_pe_for_dvrp_output=$use_seperate_pe_for_dvrp_output" >> $runfile
	2899	echo "./a.out" >> $runfile
	2900	chmod u+x $runfile
	2901
	2902	if [[ "$QUEUE" = interactive ]]
	2903	then
	2904	mpirun -np $numprocs $runfile $ROPTS > aout_output 2>&1
	2905	else
	2906	n1ge -fore -mpi $numprocs -q $queue $runfile $ROPTS > aout_output 2>&1
	2907	fi
	2908
	2909	rm $runfile
	2910	else
	2911	mpprun -n $numprocs a.out $ROPTS > aout_output 2>&1
	2912	fi
	2913	[[ $? != 0 ]] && execution_error=true
	2914
	2915
	2916	# PERFORMANCE-AUSWERTUNG MIT APPRENTICE
	2917	if [[ "$cond1" = apprentice \|\| "$cond2" = apprentice ]]
	2918	then
	2919	apprentice
	2920	fi
	2921	else
	2922	a.out $ROPTS > aout_output 2>&1
	2923	fi
	2924	fi
	2925	if [[ $? != 0 \|\| $execution_error = true ]]
	2926	then
	2927
	2928	# ABBRUCH BEI LAUFZEITFEHLER
	2929	[[ ! ( "$cond1" = debug \|\| "$cond2" = debug ) ]] && cat aout_output
	2930	printf "\n +++ runtime error occured"
	2931	locat=execution
	2932	exit
	2933	else
	2934	[[ ! ( "$cond1" = debug \|\| "$cond2" = debug ) ]] && cat aout_output
	2935	printf "\n$striche\n *** execution finished \n"
	2936	fi
	2937
	2938
	2939
	2940	# EVENTUELLE OUTPUT-KOMMANDOS ABARBEITEN
	2941	(( i = 0 ))
	2942	while (( i < ioc ))
	2943	do
	2944	(( i = i + 1 ))
	2945	if (( i == 1 ))
	2946	then
	2947	printf "\n\n *** execution of OUTPUT-commands:\n$striche"
	2948	fi
	2949	printf "\n >>> ${out_command[$i]}"
	2950	eval ${out_command[$i]}
	2951	if (( i == ioc ))
	2952	then
	2953	printf "\n$striche\n"
	2954	fi
	2955	done
	2956
	2957
	2958	# EVTL. INHALT DES AKTUELLEN VERZEICHNISSES AUSGEBEN
	2959	if [[ $do_trace = true ]]
	2960	then
	2961	printf "\n\n"
	2962	ls -al
	2963	fi
	2964
	2965
	2966
	2967	# OUTPUT-DATEIEN AN IHRE ZIELORTE KOPIEREN
	2968	(( i = 0 ))
	2969	while (( i < iout ))
	2970	do
	2971	(( i = i + 1 ))
	2972	if (( i == 1 ))
	2973	then
	2974	printf "\n\n *** saving OUTPUT-files:\n$striche"
	2975	fi
	2976
	2977	# PRUEFEN, OB EINZELDATEI ODER DATEI PRO PROZESSOR
	2978	files_for_pes=false; filetyp=file
	2979	if [[ "${actionout[$i]}" = pe && -n $numprocs ]]
	2980	then
	2981	files_for_pes=true; filetyp=directory
	2982	actionout[$i]=""
	2983	elif [[ "${actionout[$i]}" = pe && ! -n $numprocs ]]
	2984	then
	2985	actionout[$i]=""
	2986	elif [[ "${actionout[$i]}" = arpe && -n $numprocs ]]
	2987	then
	2988	files_for_pes=true; filetyp=directory
	2989	actionout[$i]="ar"
	2990	elif [[ "${actionout[$i]}" = arpe && ! -n $numprocs ]]
	2991	then
	2992	actionout[$i]="ar"
	2993	elif [[ "${actionout[$i]}" = flpe && -n $numprocs ]]
	2994	then
	2995	files_for_pes=true; filetyp=directory
	2996	actionout[$i]="fl"
	2997	elif [[ "${actionout[$i]}" = flpe && ! -n $numprocs ]]
	2998	then
	2999	actionout[$i]="fl"
	3000	elif [[ "${actionout[$i]}" = trpe && -n $numprocs ]]
	3001	then
	3002	files_for_pes=true; filetyp=directory
	3003	actionout[$i]="tr"
	3004	elif [[ "${actionout[$i]}" = trpe && ! -n $numprocs ]]
	3005	then
	3006	actionout[$i]="tr"
	3007	fi
	3008
	3009	if [[ ! -f ${localout[$i]} && $files_for_pes = false ]]
	3010	then
	3011	printf "\n +++ temporary OUTPUT-file ${localout[$i]} does not exist\n"
	3012	elif [[ ! -f ${localout[$i]}/_0000 && $files_for_pes = true ]]
	3013	then
	3014	printf "\n +++ temporary OUTPUT-file ${localout[$i]}/.... does not exist\n"
	3015	else
	3016
	3017
	3018	# KOPIEREN PER FTP/SCP (IMMER IM BINAERMODUS, -M: FALLS ZIELKATALOG
	3019	# NICHT VORHANDEN, WIRD VERSUCHT, IHN ANZULEGEN), ABER NUR BEI
	3020	# REMOTE-RECHNUNGEN
	3021	if [[ "${actionout[$i]}" = tr ]]
	3022	then
	3023	if [[ $localhost != $fromhost ]]
	3024	then
	3025	if [[ $files_for_pes = false ]]
	3026	then
	3027	cps=""
	3028	cst=""
	3029	else
	3030	cps=-c
	3031	cst="/"
	3032	fi
	3033	if [[ $localhost = ibmh \|\| $localhost = ibmb \|\| $localhost = nech ]]
	3034	then
	3035
	3036	# TRANSFER IN EIGENSTAENDIGEM JOB
	3037	# ZUERST KOPIE DER DATEI INS TEMPORAERE DATENVERZEICHNIS
	3038	[[ ! -d $tmp_data_catalog/TRANSFER ]] && mkdir -p $tmp_data_catalog/TRANSFER
	3039	file_to_transfer=${fname}_${localout[$i]}_to_transfer_$kennung
	3040	if [[ $files_for_pes = false ]]
	3041	then
	3042	ln -f ${localout[$i]} $tmp_data_catalog/TRANSFER/$file_to_transfer
	3043	else
	3044	mkdir $tmp_data_catalog/TRANSFER/$file_to_transfer
	3045	ln ${localout[$i]}/* $tmp_data_catalog/TRANSFER/$file_to_transfer
	3046	fi
	3047
	3048	echo "set -x" > transfer_${localout[$i]}
	3049	echo "cd $tmp_data_catalog/TRANSFER" >> transfer_${localout[$i]}
	3050	if [[ $filetransfer_protocol = ftp ]]
	3051	then
	3052	if [[ $files_for_pes = true ]]
	3053	then
	3054	printf "\n +++ WARNING: no transfer of catalogs via ftpcopy\n"
	3055	fi
	3056	printf "\n >>> OUTPUT: ${localout[$i]} by FTP in seperate job to"
	3057	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}"
	3058	printf "\n or higher cycle\n"
	3059	echo "ftpcopy -b -m $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
	3060	else
	3061	printf "\n >>> OUTPUT: ${localout[$i]}$cst by SCP in seperate job to"
	3062	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}$cst"
	3063	printf "\n or higher cycle\n"
	3064	echo "batch_scp $cps -b -m -u $return_username $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
	3065	fi
	3066	echo "[[ \$? = 0 ]] && rm $file_to_transfer" >> transfer_${localout[$i]}
	3067
	3068	if [[ $localhost = nech ]]
	3069	then
	3070	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 900 -f $filetransfer_protocol transfer_${localout[$i]}
	3071	else
	3072	if [[ "$LOGNAME" = b323013 ]]
	3073	then
	3074	subjob -v -q c1 -X 0 -m 1000 -t 900 -f $filetransfer_protocol transfer_${localout[$i]}
	3075	else
	3076	subjob -d -v -q c1 -X 0 -m 1000 -t 900 -f $filetransfer_protocol transfer_${localout[$i]}
	3077	fi
	3078	fi
	3079
	3080	else
	3081
	3082	# TRANSFER INNERHALB DIESES JOBS
	3083	transfer_failed=false
	3084	if [[ $filetransfer_protocol = ftp ]]
	3085	then
	3086	if [[ $files_for_pes = true ]]
	3087	then
	3088	printf "\n +++ WARNING: no transfer of catalogs via ftpcopy\n"
	3089	fi
	3090	printf "\n >>> OUTPUT: ${localout[$i]} by FTP to"
	3091	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}\n"
	3092	ftpcopy -b -m $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
	3093	[[ $? != 0 ]] && transfer_failed=true
	3094	else
	3095	printf "\n >>> OUTPUT: ${localout[$i]}$cst by SCP to"
	3096	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}$cst\n"
	3097	batch_scp $cps -b -m -u $return_username $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
	3098	[[ $? != 0 ]] && transfer_failed=true
	3099	fi
	3100
	3101	# BEI FEHLGESCHLAGENEM TRANSFER SICHERUNGSKOPIE AUF
	3102	# LOKALER MASCHINE ANLEGEN
	3103	if [[ $transfer_failed = true ]]
	3104	then
	3105	printf " +++ transfer failed. Trying to save a copy on the local host under:\n"
	3106	printf " ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung\n"
	3107
	3108	# ERSTMAL PRUEFEN, OB VERZEICHNIS EXISTIERT. GEGEBENENFALLS
	3109	# ANLEGEN.
	3110	eval local_catalog=${pathout[$i]}
	3111	if [[ ! -d $local_catalog ]]
	3112	then
	3113	printf " *** local directory does not exist. Trying to create:\n"
	3114	printf " $local_catalog \n"
	3115	mkdir -p $local_catalog
	3116	fi
	3117	eval cp ${localout[$i]} ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung
	3118	transfer_problems=true
	3119	fi
	3120	fi
	3121	else
	3122
	3123	# WERTZUWEISUNG, SO DASS WEITER UNTEN NUR KOPIERT WIRD
	3124	actionout[$i]=""
	3125	fi
	3126	fi
	3127
	3128
	3129	# APPEND PER FTP/SCP (IMMER IM BINAERMODUS, -M: FALLS ZIELKATALOG
	3130	# NICHT VORHANDEN, WIRD VERSUCHT, IHN ANZULEGEN), ABER NUR BEI
	3131	# REMOTE-RECHNUNGEN
	3132	if [[ "${actionout[$i]}" = tra ]]
	3133	then
	3134	if [[ $localhost != $fromhost ]]
	3135	then
	3136	if [[ $localhost = ibmh \|\| $localhost = ibmb \|\| $localhost = nech ]]
	3137	then
	3138
	3139	# TRANSFER IN EIGENSTAENDIGEM JOB
	3140	# ZUERST KOPIE DER DATEI INS TEMPORAERE DATENVERZEICHNIS
	3141	[[ ! -d $tmp_data_catalog/TRANSFER ]] && mkdir -p $tmp_data_catalog/TRANSFER
	3142	file_to_transfer=${fname}_${localout[$i]}_to_transfer_$kennung
	3143	ln -f ${localout[$i]} $tmp_data_catalog/TRANSFER/$file_to_transfer
	3144
	3145	echo "set -x" > transfer_${localout[$i]}
	3146	echo "cd $tmp_data_catalog/TRANSFER" >> transfer_${localout[$i]}
	3147	if [[ $filetransfer_protocol = ftp ]]
	3148	then
	3149	printf "\n >>> OUTPUT: ${localout[$i]} append by FTP in seperate job to"
	3150	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}"
	3151	printf "\n or higher cycle\n"
	3152	echo "ftpcopy -A -b -m $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
	3153	else
	3154	printf "\n >>> OUTPUT: ${localout[$i]} append by SCP in seperate job to"
	3155	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}"
	3156	printf "\n or higher cycle\n"
	3157	echo "batch_scp -A -b -m -u $return_username $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
	3158	fi
	3159	echo "[[ \$? = 0 ]] && rm $file_to_transfer" >> transfer_${localout[$i]}
	3160
	3161	if [[ $localhost = nech ]]
	3162	then
	3163	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 900 -f $filetransfer_protocol transfer_${localout[$i]}
	3164	else
	3165	if [[ $LOGNAME = b323013 ]]
	3166	then
	3167	subjob -v -q c1 -X 0 -m 1000 -t 900 -f $filetransfer_protocol transfer_${localout[$i]}
	3168	else
	3169	subjob -d -v -q c1 -X 0 -m 1000 -t 900 -f $filetransfer_protocol transfer_${localout[$i]}
	3170	fi
	3171	fi
	3172
	3173	else
	3174
	3175	# TRANSFER INNERHALB DIESES JOBS
	3176	transfer_failed=false
	3177	if [[ $filetransfer_protocol = ftp ]]
	3178	then
	3179	printf "\n >>> OUTPUT: ${localout[$i]} append by FTP to"
	3180	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}\n"
	3181	ftpcopy -A -b -m $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
	3182	[[ $? != 0 ]] && transfer_failed=true
	3183	else
	3184	printf "\n >>> OUTPUT: ${localout[$i]} append by SCP to"
	3185	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}\n"
	3186	batch_scp -A -b -m -u $return_username $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
	3187	[[ $? != 0 ]] && transfer_failed=true
	3188	fi
	3189
	3190	# BEI FEHLGESCHLAGENEM TRANSFER SICHERUNGSKOPIE AUF
	3191	# LOKALER MASCHINE ANLEGEN
	3192	if [[ $transfer_failed = true ]]
	3193	then
	3194	printf " +++ transfer failed. Trying to save a copy on the local host under:\n"
	3195	printf " ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung\n"
	3196
	3197	# ERSTMAL PRUEFEN, OB VERZEICHNIS EXISTIERT. GEGEBENENFALLS
	3198	# ANLEGEN
	3199	eval local_catalog=${pathout[$i]}
	3200	if [[ ! -d $local_catalog ]]
	3201	then
	3202	printf " *** local directory does not exist. Trying to create:\n"
	3203	printf " $local_catalog \n"
	3204	mkdir -p $local_catalog
	3205	fi
	3206
	3207	eval cp ${localout[$i]} ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung
	3208	transfer_problems=true
	3209	fi
	3210	fi
	3211	else
	3212
	3213	# WERTZUWEISUNG, SO DASS WEITER UNTEN NUR APPEND AUF
	3214	# LOKALER MASCHINE DURCHGEFUEHRT WIRD
	3215	actionout[$i]=a
	3216	fi
	3217	fi
	3218
	3219
	3220	# OUTPUT-DATEI FUER EINEN FORTSETZUNGSLAUF. DATEI WIRD PER
	3221	# LINK AUF DEN TEMPORAEREN DATENKATALOG GELEGT. OPTION -f WIRD
	3222	# VERWENDET, FALLS DORT NOCH EINE DATEI GLEICHEN NAMENS VORHANDEN
	3223	# SEIN SOLLTE. ANSCHLIESSEND WIRD SEINE ARCHIVIERUNG ANGESTOSSEN
	3224	if [[ "${actionout[$i]}" = fl ]]
	3225	then
	3226	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
	3227	chmod g+rx $tmp_data_catalog
	3228	if [[ $files_for_pes = false ]]
	3229	then
	3230	printf "\n >>> OUTPUT: ${localout[$i]} to"
	3231	printf "\n $tmp_data_catalog/${frelout[$i]} (temporary data catalog)\n"
	3232	ln -f ${localout[$i]} $tmp_data_catalog/${frelout[$i]}
	3233	else
	3234	printf "\n >>> OUTPUT: ${localout[$i]}/.... to"
	3235	printf "\n $tmp_data_catalog/${frelout[$i]} (temporary data catalog)\n"
	3236	mkdir $tmp_data_catalog/${frelout[$i]}
	3237	ln -f ${localout[$i]}/* $tmp_data_catalog/${frelout[$i]}
	3238	fi
	3239
	3240
	3241	# ARCHIVIERUNGSJOB WIRD ERZEUGT UND ABGESCHICKT
	3242	if [[ $store_on_archive_system = true ]]
	3243	then
	3244
	3245	if [[ $archive_system = asterix ]]
	3246	then
	3247	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
	3248	if [[ $files_for_pes = false ]]
	3249	then
	3250	echo "stageout ${frelout[$i]} > STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
	3251	else
	3252	echo "stageout -t ${frelout[$i]} > STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
	3253	fi
	3254	echo "cat STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
	3255	echo "if [[ \$(grep -c \"st.msg:150\" STAGE_OUTPUT${i}_$kennung) != 0 ]]" >> archive_${frelout[$i]}
	3256	echo "then" >> archive_${frelout[$i]}
	3257	echo " do_stageout=false" >> archive_${frelout[$i]}
	3258	echo "else" >> archive_${frelout[$i]}
	3259	echo " echo \" +++ $filetyp ${frelout[$i]} could not be stored on archive-system\" " >> archive_${frelout[$i]}
	3260	echo " cat /dev/null > ~/job_queue/ARCHIVE_ERROR_$fname" >> archive_${frelout[$i]}
	3261	echo " cat STAGE_OUTPUT${i}_$kennung > ~/job_queue/archive_${frelout[$i]}_error" >> archive_${frelout[$i]}
	3262	echo " echo \" *** $filetyp ${frelout[$i]} will be copied to \$WORK as backup\" " >> archive_${frelout[$i]}
	3263	if [[ $files_for_pes = false ]]
	3264	then
	3265	echo " cp ${frelout[$i]} \$WORK" >> archive_${frelout[$i]}
	3266	else
	3267	echo " cp -r ${frelout[$i]} \$WORK/${frelout[$i]}" >> archive_${frelout[$i]}
	3268	fi
	3269	echo " echo \" *** $filetyp ${frelout[$i]} saved\" " >> archive_${frelout[$i]}
	3270	echo "fi" >> archive_${frelout[$i]}
	3271	echo "rm STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
	3272	elif [[ $archive_system = DMF ]]
	3273	then
	3274	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
	3275	if [[ $files_for_pes = false ]]
	3276	then
	3277	printf "\n +++ archiving of single files impossible with $archive_system !\n"
	3278	locat=DMF
	3279	exit
	3280	else
	3281	# FUER RECHNER IN JUELICH. DORT KOENNTEN AUCH
	3282	# EINZELNE DATEIEN GESICHERT WERDEN (SPAETER KORR.)
	3283	echo "rm -rf \$ARCHIVE/${frelout[$i]}" >> archive_${frelout[$i]}
	3284	echo "cp -r ${frelout[$i]} \$ARCHIVE" >> archive_${frelout[$i]}
	3285	fi
	3286	elif [[ $archive_system = tivoli ]]
	3287	then
	3288	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
	3289	if [[ $files_for_pes = false ]]
	3290	then
	3291	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
	3292	echo "set -x" >> archive_${frelout[$i]}
	3293	echo "rm -rf \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
	3294	echo "cp ${frelout[$i]} \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
	3295	else
	3296
	3297	echo "set -x" >> archive_${frelout[$i]}
	3298	echo "rm -rf \$PERM/${frelout[$i]}/*" >> archive_${frelout[$i]}
	3299	echo "[[ ! -d \$PERM/${frelout[$i]} ]] && mkdir $PERM/${frelout[$i]}" >> archive_${frelout[$i]}
	3300	cd $tmp_data_catalog
	3301	all_files=`ls -1 ${frelout[$i]}/*`
	3302	cd - > /dev/null
	3303	(( inode = 0 ))
	3304	(( tp1 = tasks_per_node + 1 ))
	3305	while (( inode < nodes ))
	3306	do
	3307	# echo "*** all_files = \"$all_files\" "
	3308	files=`echo $all_files \| cut -d" " -f1-$tasks_per_node`
	3309	all_files=`echo $all_files \| cut -d" " -f$tp1-`
	3310	# echo "*** tasks_per_node = \"$tasks_per_node\" "
	3311	# echo "*** files = \"$files\" "
	3312	# echo "*** all_files = \"$all_files\" "
	3313	echo "tar cvf \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar $files" >> archive_${frelout[$i]}
	3314	echo "dsmc incremental \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar" >> archive_${frelout[$i]}
	3315	echo "dsmmigrate \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar" >> archive_${frelout[$i]}
	3316	(( inode = inode + 1 ))
	3317	done
	3318	# echo "rm -rf \$PERM/${frelout[$i]}.tar" >> archive_${frelout[$i]}
	3319	# echo "tar cvf \$PERM/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
	3320	fi
	3321	elif [[ $archive_system = ut ]]
	3322	then
	3323	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
	3324	if [[ $files_for_pes = false ]]
	3325	then
	3326	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
	3327	echo "set -x" >> archive_${frelout[$i]}
	3328	echo "rm -rf \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
	3329	echo "cp ${frelout[$i]} \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
	3330	else
	3331
	3332	echo "set -x" >> archive_${frelout[$i]}
	3333	echo "rm -rf \$UT/${frelout[$i]}/*" >> archive_${frelout[$i]}
	3334	echo "[[ ! -d \$UT/${frelout[$i]} ]] && mkdir $UT/${frelout[$i]}" >> archive_${frelout[$i]}
	3335	cd $tmp_data_catalog
	3336	all_files=`ls -1 ${frelout[$i]}/*`
	3337	cd - > /dev/null
	3338	(( inode = 0 ))
	3339	(( tp1 = tasks_per_node + 1 ))
	3340	while (( inode < nodes ))
	3341	do
	3342	files=`echo $all_files \| cut -d" " -f1-$tasks_per_node`
	3343	all_files=`echo $all_files \| cut -d" " -f$tp1-`
	3344	echo "tar cvf \$UT/${frelout[$i]}/${frelout[$i]}.node_$inode.tar $files" >> archive_${frelout[$i]}
	3345	(( inode = inode + 1 ))
	3346	done
	3347	fi
	3348	elif [[ $archive_system = none ]]
	3349	then
	3350	printf " +++ archiving on $localhost not available!\n"
	3351	fi
	3352
	3353	if [[ $archive_system != none ]]
	3354	then
	3355	if [[ $localhost = ibmh \|\| $localhost = ibmb ]]
	3356	then
	3357	subjob -d -v -q cdata -X 0 -m 1000 -t 7200 -f $filetransfer_protocol archive_${frelout[$i]}
	3358	elif [[ $localhost = nech ]]
	3359	then
	3360	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 7200 -f $filetransfer_protocol archive_${frelout[$i]}
	3361	fi
	3362	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
	3363	fi
	3364	else
	3365	printf " +++ caution: option -A is switched on. No archiving on $archive_system!\n"
	3366	fi
	3367
	3368
	3369	# LEERDATEI IM BENUTZERVERZEICHNIS ANLEGEN, DAMIT BEKANNT IST,
	3370	# WIE DIE HOECHSTE ZYKLUSNUMMER AUF DEM ARCHIV-SYSTEM LAUTET
	3371	if [[ $files_for_pes = false ]]
	3372	then
	3373	cat /dev/null > ${pathout[$i]}
	3374	else
	3375	mkdir -p ${pathout[$i]}
	3376	fi
	3377
	3378	fi
	3379
	3380
	3381	# KOPIEREN AUF LOKALER MASCHINE ZUM ARCHIV-SYSTEM
	3382	# AUSSERDEM MUSS LEERDATEI ANGELEGT WERDEN, DAMIT BEKANNT IST,
	3383	# WIE DIE HOECHSTE ZYKLUSNUMMER AUF DEM ARCHIV-SYSTEM LAUTET
	3384	# FALLS IRGENDEINE (VON MEHREREN) ARCHIVIERUNGEN SCHIEF GEHT,
	3385	# WIRD FLAG GESETZT UND BLEIBT AUCH BEI WEITEREN ORDNUNGS-
	3386	# GEMAESSEN ARCHIVIERUNGEN GESETZT
	3387	if [[ "${actionout[$i]}" = ar ]]
	3388	then
	3389	if [[ $files_for_pes = false ]]
	3390	then
	3391	printf "\n >>> OUTPUT: ${localout[$i]} to"
	3392	printf "\n ${pathout[$i]}"
	3393	printf "\n File will be copied to archive-system ($archive_system) !\n"
	3394	else
	3395	printf "\n >>> OUTPUT: ${localout[$i]}/_.... to"
	3396	printf "\n ${pathout[$i]}"
	3397	printf "\n Directory will be copied to archive-system ($archive_system) !\n"
	3398	fi
	3399	mv ${localout[$i]} ${frelout[$i]}
	3400
	3401	file_saved=false
	3402
	3403	if [[ $archive_system = asterix ]]
	3404	then
	3405	do_stageout=true
	3406	(( stageout_anz = 0 ))
	3407	while [[ $do_stageout = true ]]
	3408	do
	3409	if [[ $files_for_pes = false ]]
	3410	then
	3411	stageout ${frelout[$i]} > STAGE_OUTPUT
	3412	else
	3413	stageout -t ${frelout[$i]} > STAGE_OUTPUT
	3414	fi
	3415	cat STAGE_OUTPUT
	3416	if [[ $(grep -c "st.msg:150" STAGE_OUTPUT) != 0 ]]
	3417	then
	3418	file_saved=true
	3419	do_stageout=false
	3420	else
	3421	if [[ $files_for_pes = false ]]
	3422	then
	3423	printf "\n +++ file ${frelout[$i]} could not be saved on archive-system"
	3424	else
	3425	printf "\n +++ directory ${frelout[$i]} could not be saved on archive-system"
	3426	fi
	3427	(( stageout_anz = stageout_anz + 1 ))
	3428	if (( stageout_anz == 10 ))
	3429	then
	3430	printf "\n +++ stoped after 10 unsuccessful tries!"
	3431	archive_save=false
	3432	do_stageout=false
	3433	else
	3434	printf "\n *** new try to store on archive after 15 min:"
	3435	sleep 900
	3436	fi
	3437	fi
	3438	done
	3439	elif [[ $archive_system = DMF ]]
	3440	then
	3441	if [[ $files_for_pes = false ]]
	3442	then
	3443	printf "\n +++ archiving of single files impossible on $archive_system!\n"
	3444	locat=DMF
	3445	exit
	3446	else
	3447	rm -rf $ARCHIVE/${frelout[$i]}
	3448	cp -r ${frelout[$i]} $ARCHIVE
	3449	fi
	3450	file_saved=true
	3451	elif [[ $archive_system = tivoli ]]
	3452	then
	3453	# ARCHIVIERUNG NUR PER BATCH-JOB MOEGLICH
	3454	# DATEI MUSS ZWISCHENZEITLICH INS TEMPORAERE DATENVERZEICHNIS
	3455	# GELEGT WERDEN
	3456	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
	3457	chmod g+rx $tmp_data_catalog
	3458	if [[ $files_for_pes = false ]]
	3459	then
	3460	ln -f ${frelout[$i]} $tmp_data_catalog/${frelout[$i]}
	3461	else
	3462	mkdir $tmp_data_catalog/${frelout[$i]}
	3463	ln -f ${frelout[$i]}/* $tmp_data_catalog/${frelout[$i]}
	3464	fi
	3465
	3466	# BATCH JOB GENERIEREN UND ABSCHICKEN; DATEI MUSS WIEDER
	3467	# AUS TEMPORAEREM DATENVERZEICHNIS ENTFERNT WERDEN
	3468	echo "cd $tmp_data_catalog" > archive_${frelout[$i]}
	3469	if [[ $files_for_pes = false ]]
	3470	then
	3471	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
	3472	echo "rm -rf \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
	3473	echo "cp ${frelout[$i]} \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
	3474	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
	3475	else
	3476	echo "rm -rf \$PERM/${frelout[$i]}.tar" >> archive_${frelout[$i]}
	3477	echo "tar cvf \$PERM/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
	3478	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
	3479	fi
	3480
	3481	subjob -v -d -q cdata -X 0 -m 1000 -t 7200 -f $filetransfer_protocol archive_${frelout[$i]}
	3482	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
	3483	file_saved=true
	3484
	3485	elif [[ $archive_system = ut ]]
	3486	then
	3487	# ARCHIVIERUNG NUR PER BATCH-JOB MOEGLICH
	3488	# DATEI MUSS ZWISCHENZEITLICH INS TEMPORAERE DATENVERZEICHNIS
	3489	# GELEGT WERDEN
	3490	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
	3491	chmod g+rx $tmp_data_catalog
	3492	if [[ $files_for_pes = false ]]
	3493	then
	3494	ln -f ${frelout[$i]} $tmp_data_catalog/${frelout[$i]}
	3495	else
	3496	mkdir $tmp_data_catalog/${frelout[$i]}
	3497	ln -f ${frelout[$i]}/* $tmp_data_catalog/${frelout[$i]}
	3498	fi
	3499
	3500	# BATCH JOB GENERIEREN UND ABSCHICKEN; DATEI MUSS WIEDER
	3501	# AUS TEMPORAEREM DATENVERZEICHNIS ENTFERNT WERDEN
	3502	echo "cd $tmp_data_catalog" > archive_${frelout[$i]}
	3503	if [[ $files_for_pes = false ]]
	3504	then
	3505	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
	3506	echo "rm -rf \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
	3507	echo "cp ${frelout[$i]} \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
	3508	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
	3509	else
	3510	echo "rm -rf \$UT/${frelout[$i]}.tar" >> archive_${frelout[$i]}
	3511	echo "tar cvf \$UT/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
	3512	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
	3513	fi
	3514
	3515	subjob -v -c /pf/b/$usern/job_queue -d -q pp -X 0 -m 1000 -t 7200 -f $filetransfer_protocol archive_${frelout[$i]}
	3516	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
	3517	file_saved=true
	3518
	3519	else
	3520	printf "\n +++ archive_system=\"$archive_system\" archiving impossible!"
	3521	archive_save=false
	3522	fi
	3523	if [[ $file_saved = true ]]
	3524	then
	3525	if [[ $files_for_pes = false ]]
	3526	then
	3527	cat /dev/null > ${pathout[$i]}
	3528	else
	3529	mkdir -p ${pathout[$i]}
	3530	fi
	3531	fi
	3532	fi
	3533
	3534	# APPEND AUF LOKALER MASCHINE
	3535	if [[ "${actionout[$i]}" = "a" ]]
	3536	then
	3537	printf "\n >>> OUTPUT: ${localout[$i]} append to ${pathout[$i]}\n"
	3538	cat ${localout[$i]} >> ${pathout[$i]}
	3539	fi
	3540
	3541	# KOPIEREN AUF LOKALER MASCHINE
	3542	# ES MUSS KOPIERT WERDEN, DA MOVE NICHT UEBER FILESYSTEM HINAUS MOEGLICH
	3543	if [[ "${actionout[$i]}" = "" && $files_for_pes = false ]]
	3544	then
	3545
	3546	# KOPIEREN AUF EINPROZESSORMASCHINE
[5]	3547	if [[ "${extout[$i]}" != " " && "${extout[$i]}" != "" ]]
[1]	3548	then
	3549	printf "\n >>> OUTPUT: ${localout[$i]} to ${pathout[$i]}.${extout[$i]}\n"
	3550	cp ${localout[$i]} ${pathout[$i]}.${extout[$i]}
	3551	else
	3552	printf "\n >>> OUTPUT: ${localout[$i]} to ${pathout[$i]}\n"
	3553	cp ${localout[$i]} ${pathout[$i]}
	3554	fi
	3555
	3556	elif [[ "${actionout[$i]}" = "" && $files_for_pes = true ]]
	3557	then
	3558
	3559	# DIE DEN PROZESSOREN EINES PARALLELRECHNERS ZUGEHOERIGEN
	3560	# DATEIEN WERDEN ERST IN EINEM KATALOG GESAMMELT UND DIESER
	3561	# WIRD DANN KOPIERT
	3562	# PER MOVE UMBENANNT WERDEN
	3563	printf "\n >>> OUTPUT: ${localout[$i]}/_.... to ${pathout[$i]}\n"
	3564	cp -r ${localout[$i]} ${pathout[$i]}
	3565
	3566	fi
	3567	fi
	3568	done
	3569	if (( i != 0 ))
	3570	then
	3571	if [[ $transfer_problems = true ]]
	3572	then
	3573	printf "\n$striche\n *** OUTPUT-files saved"
	3574	printf "\n +++ WARNING: some data transfers failed! \n"
	3575	else
	3576	printf "\n$striche\n *** all OUTPUT-files saved \n"
	3577	fi
	3578	fi
	3579
	3580
	3581	# EVENTUELL FOLGEJOB STARTEN
	3582	# DATEI CONTINUE_RUN MUSS VOM BENUTZERPROGRAMM AUS ERZEUGT WERDEN
	3583	if [[ -f CONTINUE_RUN ]]
	3584	then
	3585
	3586	if [[ $archive_save = true ]]
	3587	then
	3588
	3589	# ZUERST IN MRUN-AUFRUF OPTIONEN FUER FORTSETZUNGSLAUF, FUER
	3590	# STILLES ABARBEITEN (OHNE INTERAKTIVE RUECKFAGEN) UND FUER
	3591	# BATCH-BETRIEB (NUR WICHTIG, FALLS BATCH AUF LOKALER MASCHINE
	3592	# DURCHGEFUEHRT WERDEN SOLL) EINFUEGEN, FALLS NICHT BEREITS VOR-
	3593	# HANDEN
	3594	[[ $(echo $mc \| grep -c "\-C") = 0 ]] && mc="$mc -C"
	3595	[[ $(echo $mc \| grep -c "\-v") = 0 ]] && mc="$mc -v"
	3596	[[ $(echo $mc \| grep -c "\-b") = 0 ]] && mc="$mc -b"
	3597	if [[ $(echo $mc \| grep -c "#") != 0 ]]
	3598	then
	3599	mc=`echo $mc \| sed 's/#/f/g'`
	3600	fi
	3601
	3602
	3603	# JOB STARTEN
	3604	printf "\n\n *** initiating restart-run on \"$return_addres\" using command:\n"
	3605	echo " $mc"
	3606	printf "\n$striche\n"
	3607	if [[ $localhost != $fromhost ]]
	3608	then
	3609
	3610	if [[ $localhost = nech \|\| $localhost = ibmb \|\| $localhost = ibmh \|\| $localhost = ibms \|\| $localhost = lctit ]]
	3611	then
	3612	echo "*** ssh will be used to initiate restart-runs!"
	3613	echo " return_addres=\"$return_addres\" "
	3614	echo " return_username=\"$return_username\" "
	3615	if [[ $return_addres = 172.20.25.41 ]]
	3616	then
	3617	# WORKAROUND AUF SCIROCCO AM TIT
[33]	3618	print "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc " \| ssh $return_addres -l $return_username
[1]	3619	else
[33]	3620	ssh $return_addres -l $return_username "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc "
[1]	3621	fi
	3622	else
	3623	printf "\n +++ no restart mechanism available for host \"$localhost\" "
	3624	locat=restart; exit
	3625	fi
	3626
	3627	# WARTEN, DAMIT SICH RESTART JOB IN QUEUE EINREIHEN KANN, BEVOR
	3628	# DER AKTUELLE JOB ENDET
	3629	sleep 30
	3630
	3631	else
	3632
	3633	# BEI RECHNUNGEN AUF LOKALER MASCHINE KANN MRUN DIREKT AUFGE-
	3634	# RUFEN WERDEN
	3635	cd $LOCAL_PWD
	3636	eval $mc # ' MUESSEN AUSGEWERTET WERDEN
	3637	cd - > /dev/null
	3638	fi
	3639	printf "\n$striche\n *** restart-run initiated \n"
	3640
	3641
	3642	# EVENTUELL INPUT-DATEIEN, DIE VON TEMPORAEREM DATENVERZEICHNIS
	3643	# GEHOLT WORDEN SIND, LOESCHEN
	3644	(( i = 0 ))
	3645	while (( i < iin ))
	3646	do
	3647	(( i = i + 1 ))
	3648	if [[ "${got_tmp[$i]}" = true && $keep_data_from_previous_run = false ]]
	3649	then
	3650	rm -r $tmp_data_catalog/${frelin[$i]}
	3651	fi
	3652	done
	3653
	3654	else
	3655
	3656	printf "\n +++ no restart-run possible, since errors occured"
	3657	printf "\n during the archive process"
	3658	fi
	3659
	3660	fi
	3661
	3662
	3663
	3664	# EVTL. EMAIL-BENACHRICHTIGUNG UEBER ABGESCHLOSSENEN LAUF
	3665	if [[ "$email_notification" != "" ]]
	3666	then
	3667
	3668	if [[ $localhost != $fromhost ]]
	3669	then
	3670	if [[ -f CONTINUE_RUN ]]
	3671	then
	3672	echo "PALM restart run necessary" > email_text
	3673	echo "description header of actual run:" >> email_text
	3674	cat CONTINUE_RUN >> email_text
	3675	echo "mrun-command to restart:" >> email_text
	3676	echo "$mc" >> email_text
	3677	else
	3678	echo "PALM run with base filename \"$fname\" on host \"$localhost\" finished" > email_text
	3679	fi
	3680	mail $email_notification < email_text
	3681	printf "\n *** email notification sent to \"$email_notification\" "
	3682	fi
	3683	fi
	3684
	3685
	3686
	3687	# ALLE ARBEITEN BEENDET. TEMPORAERER KATALOG KANN GELOESCHT WERDEN
	3688	cd $HOME
	3689	[[ $delete_temporary_catalog = true ]] && rm -rf $TEMPDIR
	3690
	3691	else
	3692
	3693
	3694	# FALLS AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL, WERDEN JETZT ENTSPRE-
	3695	# CHENDE AKTIONEN DURCHGEFUEHRT
	3696
	3697	# MRUN-BEFEHL FUER REMOTE-MASCHINE ZUSAMMENSTELLEN
	3698	mrun_com="$mrun_script_name -a $afname -c $config_file -d $fname -f $filetransfer_protocol -h $host -H $fromhost -m $memory -t $cpumax -q $queue -R $return_addres -U $return_username -u $remote_username"
	3699	[[ "$cpp_opts" != "" ]] && mrun_com=${mrun_com}" -D \"$cpp_opts\""
	3700	[[ $do_compile = true ]] && mrun_com=${mrun_com}" -s \"$source_list\""
	3701	[[ "$input_list" != "" ]] && mrun_com=${mrun_com}" -i \"$input_list\""
	3702	[[ $ignore_archive_error = true ]] && mrun_com=${mrun_com}" -I"
	3703	[[ $keep_data_from_previous_run = true ]] && mrun_com=${mrun_com}" -k"
	3704	[[ "$additional_conditions" != "" ]] && mrun_com=${mrun_com}" -K \"$additional_conditions\""
	3705	# [[ "$makefile" != "$source_path/Makefile" ]] && mrun_com=${mrun_com}" -M \"$makefile\""
	3706	[[ "$output_list" != "" ]] && mrun_com=${mrun_com}" -o \"$output_list\""
	3707	[[ "$read_from_config" = false ]] && mrun_com=${mrun_com}" -S"
	3708	[[ $do_trace = true ]] && mrun_com=${mrun_com}" -x"
	3709	[[ "$numprocs" != "" ]] && mrun_com=${mrun_com}" -X $numprocs"
	3710	if [[ $use_openmp = true ]]
	3711	then
	3712	mrun_com=${mrun_com}" -O"
	3713	[[ "$tasks_per_node" != "" ]] && mrun_com=${mrun_com}" -T $threads_per_task"
	3714	else
	3715	[[ "$tasks_per_node" != "" ]] && mrun_com=${mrun_com}" -T $tasks_per_node"
	3716	fi
	3717	[[ $store_on_archive_system = false ]] && mrun_com=${mrun_com}" -A"
	3718	[[ $package_list != "" ]] && mrun_com=${mrun_com}" -p \"$package_list\""
	3719	[[ $return_password != "" ]] && mrun_com=${mrun_com}" -P $return_password"
	3720	[[ $delete_temporary_catalog = false ]] && mrun_com=${mrun_com}" -B"
	3721	[[ $node_usage != default ]] && mrun_com=${mrun_com}" -n $node_usage"
	3722	if [[ $do_remote = true ]]
	3723	then
	3724	printf "\n>>>> MRUN-command on execution host:\n>>>> $mrun_com \n"
	3725	fi
	3726
	3727
	3728	# ZUSAMMENSTELLUNG DES JOBSCRIPTS AUF DATEI jobfile
	3729	jobfile=jobfile.$RANDOM
	3730
	3731
	3732	# TEMPORAERES VERZEICHNIS GENERIEREN UND NACH DORT WECHSELN
	3733	echo "mkdir $TEMPDIR" >> $jobfile
	3734	echo "cd $TEMPDIR" >> $jobfile
	3735
	3736
	3737	# EVENTUELL FEHLERVERFOLGUNG AKTIVIEREN
	3738	if [[ $do_trace = true ]]
	3739	then
	3740	echo "set -x" >> $jobfile
	3741	else
	3742	echo "set +vx" >> $jobfile
	3743	fi
	3744
	3745
	3746	# ABSPEICHERN DER QUELLTEXTE (NUR FALLS UEBERSETZT WERDEN SOLL)
	3747	# SOWIE GEGEBENENFALLS DES MAKEFILES
	3748	if [[ $do_compile = true ]]
	3749	then
	3750
	3751	source_catalog=SOURCES_FOR_RUN_$fname
	3752
	3753	# UNTERVERZEICHNIS FUER QUELLTEXTE UND MAKEFILE ANLEGEN
	3754	# MRUN WIRD DIESES VRZEICHNIS UEBER ENVIRONMENT VARIABLE
	3755	# MITGETEILT (UEBERSTEUERT ANGABE IN KONFIGURATIONSDATEI)
	3756	echo "mkdir SOURCES_FOR_RUN_$fname" >> $jobfile
	3757	echo "export SOURCES_COMPLETE=true" >> $jobfile
	3758	echo "cd SOURCES_FOR_RUN_$fname" >> $jobfile
	3759
	3760	for filename in $source_list
	3761	do
	3762	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
	3763	echo "cat > $filename << \"%END%\"" >> $jobfile
	3764	cat $source_catalog/$filename >> $jobfile
	3765	echo " " >> $jobfile
	3766	echo "%END%" >> $jobfile
	3767	echo " " >> $jobfile
	3768	done
	3769
	3770	if [[ "$use_makefile" = true ]]
	3771	then
	3772	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
	3773	echo "cat > Makefile << \"%END%\"" >> $jobfile
	3774	cat $source_catalog/Makefile >> $jobfile
	3775	echo " " >> $jobfile
	3776	echo "%END%" >> $jobfile
	3777	echo " " >> $jobfile
	3778	fi
	3779
	3780	echo "cd - > /dev/null" >> $jobfile
	3781
	3782	fi
	3783
	3784
	3785	# ABSPEICHERN DER KONFIGURATIONSDATEI
	3786	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
	3787	echo "cat > $config_file << \"%END%\"" >> $jobfile
	3788	cat $config_file >> $jobfile
	3789	echo "%END%" >> $jobfile
	3790	echo " " >> $jobfile
	3791
	3792
	3793	# ABSPEICHERN DER AKTUELLEN MRUN-VERSION
	3794	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
	3795	echo "cat > $mrun_script_name <<\"%END%\"" >> $jobfile
[22]	3796	cat ${PALM_BIN}/$mrun_script_name >> $jobfile
[1]	3797	echo "%END%" >> $jobfile
	3798	if [[ $host = lctit ]]
	3799	then
	3800	echo "sed 's/bin\/ksh/home2\/usr5\/mkanda\/pub\/ksh/' < $mrun_script_name > mrun_new" >> $jobfile
	3801	echo "mv mrun_new $mrun_script_name" >> $jobfile
	3802	fi
	3803	echo "chmod u+x $mrun_script_name" >> $jobfile
	3804	echo "execute_mrun=true" >> $jobfile
	3805	echo " " >> $jobfile
	3806
	3807	# EVTL. BENOETIGTE INPUT-DATEIEN PER FTP HOLEN ODER DEM JOB DIREKT
	3808	# MITGEBEN UND AUF DEM REMOTE-RECHNER IM BENUTZERVERZEICHNIS ABLEGEN
	3809	# FALLS DIESES NICHT EXISTIERT, WIRD VERSUCHT, DAS JEWEILS LETZTE
	3810	# UNTERVERZEICHNIS DES PFADNAMENS ANZULEGEN
	3811	if [[ $do_remote = true ]]
	3812	then
	3813	(( i = 0 ))
	3814	while (( i < iin ))
	3815	do
	3816	(( i = i + 1 ))
	3817	echo "[[ ! -d ${pathin[$i]} ]] && mkdir -p ${pathin[$i]}" >> $jobfile
	3818	if [[ "${transin[$i]}" = job ]]
	3819	then
	3820	echo "cat > ${remotepathin[$i]} <<\"%END%\"" >> $jobfile
	3821	eval cat ${pathin[$i]}/${frelin[$i]} >> $jobfile
	3822	echo " " >> $jobfile
	3823	echo "%END%" >> $jobfile
	3824	else
	3825	if [[ $filetransfer_protocol = ftp ]]
	3826	then
	3827	echo "ftpcopy -b -o -g -s $return_addres ${remotepathin[$i]} \"${pathin[$i]}\" ${frelin[$i]}" >> $jobfile
	3828	else
	3829	echo "batch_scp -b -o -g -s -u $return_username $return_addres ${remotepathin[$i]} \"${pathin[$i]}\" ${frelin[$i]}" >> $jobfile
	3830	fi
	3831	fi
	3832
	3833	# UEBERPRUEFEN, OB DATEI ANGELEGT WERDEN KONNTE
	3834	echo "if [[ \$? = 1 ]]" >> $jobfile
	3835	echo "then" >> $jobfile
	3836	echo " echo \" \" " >> $jobfile
	3837	echo " echo \"+++ file ${remotepathin[$i]} could not be created\" " >> $jobfile
	3838	echo " echo \" please check, if directory exists on $host!\" " >> $jobfile
	3839	echo " echo \"+++ MRUN will not be continued\" " >> $jobfile
	3840	echo " execute_mrun=false" >> $jobfile
	3841	echo "fi" >> $jobfile
	3842	done
	3843	fi
	3844
	3845	# ARBEITSKATALOG AUF DER LOKALEN MASCHINE FUER EVENTUELLE
	3846	# FORTSETZUNGSLAUEFE PER ENV-VARIABLE UEBERGEBEN
	3847	echo "LOCAL_PWD=$working_directory" >> $jobfile
	3848	echo "export LOCAL_PWD" >> $jobfile
	3849
	3850	# EBENSO LOKALEN MRUN-KATALOG UEBERGEBEN
[22]	3851	echo "LOCAL_MRUN_PATH=$PALM_BIN" >> $jobfile
[1]	3852	echo "export LOCAL_MRUN_PATH" >> $jobfile
	3853
	3854	# echo "for_subjob_to_do=\"rm -rf $TEMPDIR\" " >> $jobfile
	3855
	3856	# MRUN AUF ZIELRECHNER AUFRUFEN
	3857	echo "set -x" >> $jobfile
	3858	echo "[[ \$execute_mrun = true ]] && ./$mrun_com" >> $jobfile
	3859
	3860	echo 'ls -al; echo `pwd`' >> $jobfile
	3861	echo "cd \$HOME" >> $jobfile
	3862	echo "rm -rf $TEMPDIR" >> $jobfile
	3863
	3864
	3865
	3866
	3867	# JOB PER SUBJOB STARTEN
	3868	if [[ $silent = false ]]
	3869	then
	3870	printf "\n "
	3871	else
	3872	printf "\n\n"
	3873	fi
	3874
	3875	subjob $job_on_file -h $host -u $remote_username -q $queue -m $memory -N $node_usage -t $cpumax $XOPT $TOPT $OOPT -n $fname -f $filetransfer_protocol -v $jobfile
	3876	rm -rf $jobfile
	3877
	3878
	3879	fi # ENDE REMOTE-TEIL
	3880
	3881
	3882
	3883	# ENDE DER PROZEDUR

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